Miyakogusa Predicted Gene

Lj4g3v0200160.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0200160.1 Non Characterized Hit- tr|I3SM62|I3SM62_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,100,0,PEROXIREDOXIN-6,NULL; THIOREDOXIN PEROXIDASE,NULL;
Thioredoxin-like,Thioredoxin-like fold; no descri,CUFF.46642.1
         (219 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g094720.1 | 1-cys peroxiredoxin PER1 | HC | chr4:38843447-...   392   e-109
Medtr7g105830.1 | 1-cys peroxiredoxin PER1 | HC | chr7:42966961-...    80   2e-15
Medtr1g105090.1 | 1-cys peroxiredoxin PER1 | HC | chr1:25004964-...    76   3e-14

>Medtr4g094720.1 | 1-cys peroxiredoxin PER1 | HC |
           chr4:38843447-38842477 | 20130731
          Length = 218

 Score =  392 bits (1007), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 184/218 (84%), Positives = 202/218 (92%)

Query: 1   MPGLTIGDTIPNLDVETTNGKYNLHKFCSDSWTILFSHPGDFTPVCTTELGKMAQYSKEF 60
           MPGLTIGDTIP+L+V+TT GK  LH FCSDSWTILFSHPGDFTPVCTTELGKMAQY+ EF
Sbjct: 1   MPGLTIGDTIPDLEVDTTQGKIKLHHFCSDSWTILFSHPGDFTPVCTTELGKMAQYASEF 60

Query: 61  YQRGVKLLGMSCNDIKSHNEWIKDIEAYTSGAKVDYPIIADPERELIKQLNMVDPDEKDS 120
            +RGV LLGMSC+D++SH EWIKDIEA+T GAKV+YPII+DP+RE+IKQLNMVDPDEKDS
Sbjct: 61  NKRGVMLLGMSCDDLESHKEWIKDIEAHTPGAKVNYPIISDPKREIIKQLNMVDPDEKDS 120

Query: 121 NGNLPSRALHIVGPDLKIKLSFLYPATTGRNMDEVLRVVESLQKASKFKVATPANWKQGE 180
           NGNLPSRALHIVGPD KIKLSFLYPA TGRNMDEVLRVVESLQKASK+K+ATPANWK GE
Sbjct: 121 NGNLPSRALHIVGPDKKIKLSFLYPAQTGRNMDEVLRVVESLQKASKYKIATPANWKPGE 180

Query: 181 PVVIQPGVTNEQAKEMFPQGFETKDLPSKKEYLRFTKV 218
           PVVI P VTN+QAK+MFPQGF+T DLPSKKEYLRFT V
Sbjct: 181 PVVISPDVTNDQAKDMFPQGFKTADLPSKKEYLRFTNV 218


>Medtr7g105830.1 | 1-cys peroxiredoxin PER1 | HC |
           chr7:42966961-42971097 | 20130731
          Length = 265

 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 87/180 (48%), Gaps = 10/180 (5%)

Query: 6   IGDTIPNLDVETTNG----KYNLHKFCSDSWTILFSHPGDFTPVCTTELGKMAQYSKEFY 61
           +G+  P+ + E        K  L ++    + ILF +P DFT VC TE+   +    EF 
Sbjct: 74  VGNAAPDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDFTFVCPTEITAFSDRHAEFA 133

Query: 62  QRGVKLLGMSCNDIKSHNEWIKDIEAYTSGAKVDYPIIADPERELIKQLNMVDPDEKDSN 121
           +   ++LG+S + + SH  W++          ++YP+++D  + + K   ++ PD+    
Sbjct: 134 ELNTEILGVSVDSVFSHLAWVQTDRKSGGLGDLNYPLVSDVTKSISKSYGVLIPDQ---- 189

Query: 122 GNLPSRALHIVGPDLKIKLSFLYPATTGRNMDEVLRVVESLQKASKF-KVATPANWKQGE 180
             +  R L I+  +  I+ S +     GR++DE  R +++LQ   +      PA WK GE
Sbjct: 190 -GIALRGLFIIDKEGVIQHSTINNLGIGRSVDETKRTLQALQYVQENPDEVCPAGWKPGE 248


>Medtr1g105090.1 | 1-cys peroxiredoxin PER1 | HC |
           chr1:25004964-25008953 | 20130731
          Length = 267

 Score = 75.9 bits (185), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 85/180 (47%), Gaps = 10/180 (5%)

Query: 6   IGDTIPNLDVETTNGK----YNLHKFCSDSWTILFSHPGDFTPVCTTELGKMAQYSKEFY 61
           +G+  P+ + E    +      L  +    + ILF +P DFT VC TE+   +    EF 
Sbjct: 76  VGNAAPDFEAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRHAEFE 135

Query: 62  QRGVKLLGMSCNDIKSHNEWIKDIEAYTSGAKVDYPIIADPERELIKQLNMVDPDEKDSN 121
               ++LG+S + + SH  W++          ++YP+++D  + + K   ++ PD+    
Sbjct: 136 AINTEILGVSVDSVFSHLAWVQTDRKSGGLGDLNYPLVSDVTKSISKSYGVLIPDQ---- 191

Query: 122 GNLPSRALHIVGPDLKIKLSFLYPATTGRNMDEVLRVVESLQKASKF-KVATPANWKQGE 180
             +  R L I+  +  I+ S +     GR++DE  R +++LQ   +      PA WK GE
Sbjct: 192 -GIALRGLFIIDKEGIIQHSTINNLGIGRSVDETKRTLQALQYVQENPDEVCPAGWKPGE 250