Miyakogusa Predicted Gene
- Lj4g3v0200090.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v0200090.1 Non Characterized Hit- tr|Q2PES0|Q2PES0_TRIPR
Putative receptor-like GPI-anchored protein 2
OS=Trifo,63.54,0,seg,NULL; LysM,Peptidoglycan-binding lysin domain; no
description,NULL; LysM domain,NULL; Lysin moti,CUFF.46639.1
(370 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g094730.1 | LysM domain GPI-anchored protein | HC | chr4:3... 430 e-120
Medtr4g094730.2 | LysM domain GPI-anchored protein | HC | chr4:3... 427 e-119
Medtr3g072410.1 | LysM domain GPI-anchored protein | HC | chr3:3... 137 2e-32
Medtr5g042440.1 | LysM-domain receptor-like kinase | HC | chr5:1... 65 1e-10
Medtr4g058570.1 | LysM-domain receptor-like kinase | HC | chr4:2... 59 8e-09
Medtr5g019040.1 | Nod-factor receptor 5, putative | HC | chr5:71... 57 2e-08
Medtr2g024290.2 | LysM receptor kinase K1B | HC | chr2:8740090-8... 52 1e-06
Medtr2g024290.1 | LysM receptor kinase K1B | HC | chr2:8740090-8... 52 1e-06
>Medtr4g094730.1 | LysM domain GPI-anchored protein | HC |
chr4:38855907-38858583 | 20130731
Length = 372
Score = 430 bits (1105), Expect = e-120, Method: Compositional matrix adjust.
Identities = 220/331 (66%), Positives = 261/331 (78%), Gaps = 8/331 (2%)
Query: 1 MGTVWLSKLVATTMLVAVLGL-LAEAQIEAKFKCISENAPCHALADYSHPNGTTLRRIQT 59
M TVWL + +LVA +G+ + EAQ EA FKC++ENA C +L DY+ N TTL+ I T
Sbjct: 7 MVTVWL--ITVAVVLVASVGITVTEAQPEANFKCLTENATCRSLTDYTSTNSTTLKEIAT 64
Query: 60 LFTVKYLPDILGANNLPANTT---RVAPDQVIKVPFPCRCSNGTGLSNKVPRYKIKKGDT 116
LF VK+ D+LGANNLP+NT +V P+QVIKVPFPC+CSN TG SN VPRYKI GDT
Sbjct: 65 LFGVKHFLDLLGANNLPSNTNNSYKVNPNQVIKVPFPCKCSNRTGTSNHVPRYKIVPGDT 124
Query: 117 LYDIATTVFAGLVKYPQIQVANEIPDANNITAGDTIWIPLPCSCDAVAGSSVVHYAHLVQ 176
L IA FAGLVKY QIQ AN+IPDANNITAG TIWIPLPCSCD V G+SV+HYAH+V
Sbjct: 125 LDAIARVRFAGLVKYQQIQTANKIPDANNITAGATIWIPLPCSCDPVDGTSVMHYAHIVP 184
Query: 177 DGSSVESIAQEYGSTQQILLSLNGISDPKLLQARQLLDVPLQACSSSVKNDSPDYPLLVP 236
GSS++SIAQ+Y +QQ LLSLN + DPK L A QLLDVPL C+SS+K+DS D+PLLVP
Sbjct: 185 MGSSIQSIAQQYAISQQTLLSLNDLDDPKNLLAGQLLDVPLPVCNSSIKSDSLDFPLLVP 244
Query: 237 NATYVYTAKECVKCKCDSS-NNFRLQCEPSQHKPINDWSVCPSMECSKNVLIGNTTSTDS 295
NATY YTA ECVKCKCDS+ +N LQCE S KPIN+WSVCPS++CS +VL+GNTTSTDS
Sbjct: 245 NATYFYTAHECVKCKCDSTGDNKNLQCEASNLKPINNWSVCPSLKCSGSVLLGNTTSTDS 304
Query: 296 CNRTICDYAGYSNSK-ISTILATQNTCAVPP 325
C+R +CDY GY++S+ IST LATQNTCAV P
Sbjct: 305 CSRRVCDYTGYTSSRNISTTLATQNTCAVAP 335
>Medtr4g094730.2 | LysM domain GPI-anchored protein | HC |
chr4:38856087-38857662 | 20130731
Length = 333
Score = 427 bits (1097), Expect = e-119, Method: Compositional matrix adjust.
Identities = 218/328 (66%), Positives = 259/328 (78%), Gaps = 8/328 (2%)
Query: 1 MGTVWLSKLVATTMLVAVLGL-LAEAQIEAKFKCISENAPCHALADYSHPNGTTLRRIQT 59
M TVWL + +LVA +G+ + EAQ EA FKC++ENA C +L DY+ N TTL+ I T
Sbjct: 7 MVTVWL--ITVAVVLVASVGITVTEAQPEANFKCLTENATCRSLTDYTSTNSTTLKEIAT 64
Query: 60 LFTVKYLPDILGANNLPANTT---RVAPDQVIKVPFPCRCSNGTGLSNKVPRYKIKKGDT 116
LF VK+ D+LGANNLP+NT +V P+QVIKVPFPC+CSN TG SN VPRYKI GDT
Sbjct: 65 LFGVKHFLDLLGANNLPSNTNNSYKVNPNQVIKVPFPCKCSNRTGTSNHVPRYKIVPGDT 124
Query: 117 LYDIATTVFAGLVKYPQIQVANEIPDANNITAGDTIWIPLPCSCDAVAGSSVVHYAHLVQ 176
L IA FAGLVKY QIQ AN+IPDANNITAG TIWIPLPCSCD V G+SV+HYAH+V
Sbjct: 125 LDAIARVRFAGLVKYQQIQTANKIPDANNITAGATIWIPLPCSCDPVDGTSVMHYAHIVP 184
Query: 177 DGSSVESIAQEYGSTQQILLSLNGISDPKLLQARQLLDVPLQACSSSVKNDSPDYPLLVP 236
GSS++SIAQ+Y +QQ LLSLN + DPK L A QLLDVPL C+SS+K+DS D+PLLVP
Sbjct: 185 MGSSIQSIAQQYAISQQTLLSLNDLDDPKNLLAGQLLDVPLPVCNSSIKSDSLDFPLLVP 244
Query: 237 NATYVYTAKECVKCKCDSS-NNFRLQCEPSQHKPINDWSVCPSMECSKNVLIGNTTSTDS 295
NATY YTA ECVKCKCDS+ +N LQCE S KPIN+WSVCPS++CS +VL+GNTTSTDS
Sbjct: 245 NATYFYTAHECVKCKCDSTGDNKNLQCEASNLKPINNWSVCPSLKCSGSVLLGNTTSTDS 304
Query: 296 CNRTICDYAGYSNSK-ISTILATQNTCA 322
C+R +CDY GY++S+ IST LATQNTCA
Sbjct: 305 CSRRVCDYTGYTSSRNISTTLATQNTCA 332
>Medtr3g072410.1 | LysM domain GPI-anchored protein | HC |
chr3:32553629-32557165 | 20130731
Length = 412
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/287 (32%), Positives = 149/287 (51%), Gaps = 20/287 (6%)
Query: 40 CHALADYSHPNGTTLRRIQTLFTVKYLPDILGANNL----PANTTRVAPDQV-IKVPFPC 94
C++L Y+ + + +LF + + +L AN++ P + P ++ +K+P C
Sbjct: 34 CNSLLGYTLYTDLKVSELSSLFQIDPI-SLLTANSIDISYPDVEHHILPSKLYLKIPIQC 92
Query: 95 RCSNGTGLSNKVPRYKIKKGDTLYDIATTVFAGLVKYPQIQVANEIPDANNITAGDTIWI 154
C +G S YKI+ DTL IA +++ GLV Q++ AN + D N + G + +
Sbjct: 93 SCIDGIRKSVST-NYKIRPSDTLSSIADSIYGGLVSSDQLREANSVTDPNVLDVGQNLVV 151
Query: 155 PLPCSC--DAVAGSSVVHYAHLVQDGSSVESIAQEYGSTQQILLSLNGISDPKLLQARQL 212
PLPC+C + G ++ +++VQ S+ +IA Y +T L+++N + + A +
Sbjct: 152 PLPCTCFNGSDNGLPAIYMSYVVQPLDSLNNIAARYFTTLTDLMNVNAMGTTG-ISAGDI 210
Query: 213 LDVPLQACSSSVKNDSPDYPLLVPNATYVYTAKECVKCKCDSSNNFRLQCEPSQHKPIND 272
L +P+ AC+S DS D+ LLVPN +Y TA CV+C C N L C P+
Sbjct: 211 LAIPIPACASKFPKDSADFGLLVPNGSYAITAGHCVQCSC-GPRNLNLYCMPASLA---- 265
Query: 273 WSVCPSMEC-SKNVLIGNTT---STDSCNRTICDYAGYSNSKISTIL 315
C SM+C S N+++GN T ++ CN T C Y G N I+T L
Sbjct: 266 -VSCSSMQCKSSNLMLGNVTVQQTSGGCNVTSCTYDGIVNGTIATTL 311
>Medtr5g042440.1 | LysM-domain receptor-like kinase | HC |
chr5:18654547-18659757 | 20130731
Length = 632
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 83/169 (49%), Gaps = 8/169 (4%)
Query: 39 PCHALADYSH--PNGTTLRRIQTLFTVKYLPDILGANNLPANTTRVAPDQVIKVPFPCRC 96
PC Y PN L I LF + L I +N+ + ++ + P+Q + +P C C
Sbjct: 50 PCQTYVYYKATPPNYLDLATISDLFQLSRLM-ISKPSNISSPSSPLLPNQPLLIPLTCSC 108
Query: 97 S--NGT--GLSNKVPRYKIKKGDTLYDIATTVFAGLVKYPQIQVANEIPDANNITAGDTI 152
+ N T +S Y IK DT + ++T F L YP +QV N A N++ GD
Sbjct: 109 NFINTTFGSISYSNITYTIKPNDTFFLVSTINFQNLTTYPSVQVVNPNLVATNLSIGDNA 168
Query: 153 WIPLPCSC-DAVAGSSVVHYAHLVQDGSSVESIAQEYGSTQQILLSLNG 200
P+ C C D +S +++VQ +V SIA +G++++ ++ +NG
Sbjct: 169 VFPIFCKCPDKTKTNSSFMISYVVQPHDNVSSIASMFGTSEKSIVDVNG 217
>Medtr4g058570.1 | LysM-domain receptor-like kinase | HC |
chr4:21542051-21540064 | 20130731
Length = 603
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 94/203 (46%), Gaps = 9/203 (4%)
Query: 29 AKFKCISENAPCHALADY-SHPNGTTLRRIQTLFTVKYLPDILGANNLPANTTRVAPDQV 87
+++ C S + C Y ++ N T+ +I LF K +IL NNL +++ + +
Sbjct: 48 SRYTCNSTHDTCKTFLVYRANQNFQTISQISNLFN-KNTNEILHINNLTSSSQILKQGKE 106
Query: 88 IKVPFPCRCSNGTGLSNKVPRYKIKKGDTLYDIATTVFAGLVKYPQIQVANEIPDANNIT 147
+ +P C CSN K+ ++ T +IA VF GL+K+ + NE N
Sbjct: 107 VLIPIECTCSN-QFYQAKLSYKNLESSTTFSNIACEVFEGLLKHVTLSDQNE-NQGNEPK 164
Query: 148 AGDTIWIPLPCSCDAVAGS---SVVHY--AHLVQDGSSVESIAQEYGSTQQILLSLNGIS 202
GD I +PL CSC S V+ Y + + G + + +++++G + L N +
Sbjct: 165 FGDVIHVPLRCSCPKNYSSIMKGVIKYFVTYPLIQGDNFDKLSKKFGISLDDFLEANQLQ 224
Query: 203 DPKLLQARQLLDVPLQACSSSVK 225
+ + ++ +P++ + +K
Sbjct: 225 PLSSVFPQTVVLIPIRDANGPIK 247
>Medtr5g019040.1 | Nod-factor receptor 5, putative | HC |
chr5:7168305-7170513 | 20130731
Length = 595
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 80/178 (44%), Gaps = 9/178 (5%)
Query: 28 EAKFKCISENAP-CHALADY--SHPNGTTLRRIQTLFTVKYLPDILGANNLPANTTRVAP 84
E F C ++ P C Y PN +L I +F + L I A+N+ A ++ P
Sbjct: 34 ETNFTCPVDSPPSCETYVAYRAQSPNFLSLSNISDIFNLSPL-RIAKASNIEAEDKKLIP 92
Query: 85 DQVIKVPFPCRCSNGTGLSNKVPRYKIKKGDTLYDIATTVFAGLVKYPQIQVANEIPDAN 144
DQ++ VP C C+ +N Y IK+GD + ++ T + L Y + + N
Sbjct: 93 DQLLLVPVTCGCTKNHSFANIT--YSIKQGDNFFILSITSYQNLTNYLEFKNFNPNLSPT 150
Query: 145 NITAGDTIWIPLPCSC---DAVAGSSVVHYAHLVQDGSSVESIAQEYGSTQQILLSLN 199
+ + +PL C C + + ++ QD +V ++ ++G++Q +L+ N
Sbjct: 151 LLPLDTKVSVPLFCKCPSKNQLNKGIKYLITYVWQDNDNVTLVSSKFGASQVEMLAEN 208
>Medtr2g024290.2 | LysM receptor kinase K1B | HC |
chr2:8740090-8731579 | 20130731
Length = 540
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 94/205 (45%), Gaps = 28/205 (13%)
Query: 37 NAPCH-ALADYSHPNGTTLRRIQTLFT------VKYLPDILGANNLPANTTRVAPDQVIK 89
N+ C ALA Y GT L I LF +KY P+I + + ++T +
Sbjct: 26 NSGCDLALASYYIEEGTNLTYISNLFNQPTSEILKYNPNIQNPDTIQSHTR-------LN 78
Query: 90 VPFPCRCSNGTGLSNKVPRYKIKKGDTLYDIATTVFAGLVKYPQIQVANEIPDANNITAG 149
+PF C C +G L + YK+K+G+ +A ++ L + N P A +I AG
Sbjct: 79 IPFTCDCLSGLFLGHTFS-YKLKEGENYKAVANGYYSNLTTIDFLIRVNSYP-ATDIPAG 136
Query: 150 DTIWIPLPCSCD--AVAGSSVVHYAHLVQDGSSVESIAQEYGSTQQILLSLNGISDPKLL 207
I + + CSC V+ + + +++G S+ IA E G +++ N S+
Sbjct: 137 TVINVTVNCSCGDRDVSKDYGLFLTYPLRNGDSLPGIAMESGVPVELVKRYNPASN---F 193
Query: 208 QARQLLDVPLQACSSSVKNDSPDYP 232
+A +L+ +P K+++ ++P
Sbjct: 194 RAGELVFLP-------AKDENGNFP 211
>Medtr2g024290.1 | LysM receptor kinase K1B | HC |
chr2:8740090-8731579 | 20130731
Length = 616
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 94/205 (45%), Gaps = 28/205 (13%)
Query: 37 NAPCH-ALADYSHPNGTTLRRIQTLFT------VKYLPDILGANNLPANTTRVAPDQVIK 89
N+ C ALA Y GT L I LF +KY P+I + + ++T +
Sbjct: 26 NSGCDLALASYYIEEGTNLTYISNLFNQPTSEILKYNPNIQNPDTIQSHTR-------LN 78
Query: 90 VPFPCRCSNGTGLSNKVPRYKIKKGDTLYDIATTVFAGLVKYPQIQVANEIPDANNITAG 149
+PF C C +G L + YK+K+G+ +A ++ L + N P A +I AG
Sbjct: 79 IPFTCDCLSGLFLGHTFS-YKLKEGENYKAVANGYYSNLTTIDFLIRVNSYP-ATDIPAG 136
Query: 150 DTIWIPLPCSCD--AVAGSSVVHYAHLVQDGSSVESIAQEYGSTQQILLSLNGISDPKLL 207
I + + CSC V+ + + +++G S+ IA E G +++ N S+
Sbjct: 137 TVINVTVNCSCGDRDVSKDYGLFLTYPLRNGDSLPGIAMESGVPVELVKRYNPASN---F 193
Query: 208 QARQLLDVPLQACSSSVKNDSPDYP 232
+A +L+ +P K+++ ++P
Sbjct: 194 RAGELVFLP-------AKDENGNFP 211