Miyakogusa Predicted Gene

Lj4g3v0200070.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0200070.1 tr|A9UWS1|A9UWS1_MONBE Predicted protein
OS=Monosiga brevicollis GN=7375 PE=4
SV=1,27.52,0.000000000007,seg,NULL; no description,Pectin lyase fold;
Pectin lyase-like,Pectin lyase fold/virulence factor,CUFF.46640.1
         (498 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g094732.1 | polygalacturonase QRT3-like protein | HC | chr...   719   0.0  
Medtr2g035790.1 | polygalacturonase QRT3-like protein | HC | chr...   630   e-180
Medtr2g035760.1 | polygalacturonase QRT3-like protein | HC | chr...   414   e-115
Medtr6g015785.1 | polygalacturonase QRT3-like protein | HC | chr...   396   e-110

>Medtr4g094732.1 | polygalacturonase QRT3-like protein | HC |
           chr4:38860963-38858816 | 20130731
          Length = 480

 Score =  719 bits (1857), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 359/487 (73%), Positives = 397/487 (81%), Gaps = 7/487 (1%)

Query: 12  MRFSXXXXXXXXXXXXEAATSFSFTNRXXXXXXXXXXXXXXXIXXXXXXXXXXXXETKLR 71
           MRFS            +AAT F+F  R                            +TK+ 
Sbjct: 1   MRFSVVYFVLLLVLLVKAATCFTFFTREQKLSEFKHKLEQQQ--ASPLASPPISSQTKMS 58

Query: 72  GRVLYLSEYGADPTGSEESSDAILKAVEDAFELQKKGTLEMVAGLNDLGGVVIDLQGGNY 131
            RVLY SEYGADPTGSEESSDAILK VEDAF+LQK   L++VAG+NDLGGV+IDLQGG+Y
Sbjct: 59  NRVLYPSEYGADPTGSEESSDAILKVVEDAFKLQKG--LQLVAGVNDLGGVIIDLQGGDY 116

Query: 132 RISKPITFPSSGGANVLVQGGTLRASDTFPGDRHLVELWSSNSKKLDRTESPQDDEGLND 191
           +ISKPIT     G N++V+GGTLRASDTFPGDRHLVE+WSSNSKKL   E  Q     + 
Sbjct: 117 KISKPITLLP--GGNIVVKGGTLRASDTFPGDRHLVEMWSSNSKKLQTKEYMQGGN-FSG 173

Query: 192 MKAQNNAIYYEDITFRDILFDSSYRGGGLFIIDSARIRINNCFFLHFATEGILVQQGHET 251
           + AQNN IYYED+TFRDILFDS YRGGGLFI+DSAR RINNCFFLHF TEGILVQQGHET
Sbjct: 174 IYAQNNGIYYEDVTFRDILFDSRYRGGGLFIVDSARTRINNCFFLHFTTEGILVQQGHET 233

Query: 252 FISSCFLGQHPTIGGDKGERDFSGVAIDLASNDNAVTDVAIFSAAIGVVLRGQANILTGV 311
           FISSCFLGQH T+GGD GE+D+SGV IDLASNDNA+TDVAIFSAA G+VLRGQANIL+GV
Sbjct: 234 FISSCFLGQHSTVGGDHGEKDYSGVGIDLASNDNAITDVAIFSAATGIVLRGQANILSGV 293

Query: 312 HCYNKATYFGGVGILVKLPGNSQTRIDNCYLDYTGIVMEDPVQVHVTNGLFLGDANVLVK 371
           HCYNKA  FGG+GILVKL GNS TRIDNCY+DYTGIV EDPVQVHVTN LFLGDAN+L+K
Sbjct: 294 HCYNKAAGFGGIGILVKLAGNSLTRIDNCYMDYTGIVTEDPVQVHVTNCLFLGDANILIK 353

Query: 372 SVKGQVLGLNIVGNMFSGDPNKKVPIVKLDGEFSNIDQVVIDRNNVNGMGLRSTVGKLTV 431
           + +GQ+LGLNIV NMF+GDPNKKVPIV L+G+FSN+DQVVIDRNNVNGMGLRSTVGKLTV
Sbjct: 354 AAEGQILGLNIVDNMFNGDPNKKVPIVSLEGQFSNVDQVVIDRNNVNGMGLRSTVGKLTV 413

Query: 432 SGNGTKWVADFSSVLVFPNRISHFQYSFYAQEEPKFLAHSVTNVSDNVVIVESEKEAKGL 491
           SGNGTKW ADFSSVLVFPNRISH QYSFYAQ EPKF+AHSVTNVSDNVV+VESEKEAKGL
Sbjct: 414 SGNGTKWEADFSSVLVFPNRISHVQYSFYAQGEPKFVAHSVTNVSDNVVVVESEKEAKGL 473

Query: 492 VSFVVEQ 498
           V F VEQ
Sbjct: 474 VHFSVEQ 480


>Medtr2g035790.1 | polygalacturonase QRT3-like protein | HC |
           chr2:15178610-15181077 | 20130731
          Length = 488

 Score =  630 bits (1625), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 320/432 (74%), Positives = 367/432 (84%), Gaps = 6/432 (1%)

Query: 67  ETKLRGRVLYLSEYGADPTGSEESSDAILKAVEDAFELQKKGTLEMVAGLNDLGGVVIDL 126
            TK  GRV+Y  EYGADPTG  ESSDA++KAVE AF++   G LE++ G+ DLGGV+ID 
Sbjct: 63  HTKKSGRVVYPIEYGADPTGVNESSDAMMKAVEAAFDIDNLG-LELLLGIRDLGGVIIDF 121

Query: 127 QGGNYRISKPITFPSSGGANVLVQGGTLRASDTFPGDRHLVELWSSNSKKLDRTESPQDD 186
           QGGNY+IS PITFPSS G N++V+GGTLRAS+TFP DR+LVEL +S+SK L    +  + 
Sbjct: 122 QGGNYKISNPITFPSSSG-NLVVKGGTLRASNTFPTDRYLVELCASSSKVLQNATTAYN- 179

Query: 187 EGLNDMKAQNNAIYYEDITFRDILFDSSYRGGGLFIIDSARIRINNCFFLHFATEGILVQ 246
              N +  Q   IYYEDITFRDILFDSSYRGGG+FI+DSARIRI+NCFFLHF TEGI VQ
Sbjct: 180 ---NKLLQQTIGIYYEDITFRDILFDSSYRGGGIFIVDSARIRIDNCFFLHFNTEGIKVQ 236

Query: 247 QGHETFISSCFLGQHPTIGGDKGERDFSGVAIDLASNDNAVTDVAIFSAAIGVVLRGQAN 306
            GHETFISS FLGQH T+GGDKGER FSG AIDLASNDNA+TDVAIFSAAIG+V+RGQAN
Sbjct: 237 SGHETFISSSFLGQHSTVGGDKGERQFSGTAIDLASNDNAITDVAIFSAAIGIVVRGQAN 296

Query: 307 ILTGVHCYNKATYFGGVGILVKLPGNSQTRIDNCYLDYTGIVMEDPVQVHVTNGLFLGDA 366
           I+TGVHCYNKAT FGG+GIL+KL GNSQTRIDNCY+DY  IVMEDPVQVHVT+G FLGDA
Sbjct: 297 IITGVHCYNKATGFGGIGILLKLAGNSQTRIDNCYMDYNSIVMEDPVQVHVTDGFFLGDA 356

Query: 367 NVLVKSVKGQVLGLNIVGNMFSGDPNKKVPIVKLDGEFSNIDQVVIDRNNVNGMGLRSTV 426
           N+++KS+KG+V GLNIV NMFSG+PN  VPIVKLDG FSNIDQVVIDRNNV GM LRSTV
Sbjct: 357 NIVLKSIKGKVYGLNIVNNMFSGNPNNNVPIVKLDGGFSNIDQVVIDRNNVIGMILRSTV 416

Query: 427 GKLTVSGNGTKWVADFSSVLVFPNRISHFQYSFYAQEEPKFLAHSVTNVSDNVVIVESEK 486
           GKL+V GNGTKWV DFS+VLVFPNRISHFQYSF+  E PKF+AHSV+NVS+NVV+VESEK
Sbjct: 417 GKLSVDGNGTKWVGDFSNVLVFPNRISHFQYSFHTLEGPKFVAHSVSNVSNNVVVVESEK 476

Query: 487 EAKGLVSFVVEQ 498
              G+VS+ VEQ
Sbjct: 477 PVHGVVSYFVEQ 488


>Medtr2g035760.1 | polygalacturonase QRT3-like protein | HC |
           chr2:15158916-15161418 | 20130731
          Length = 497

 Score =  414 bits (1064), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 207/417 (49%), Positives = 292/417 (70%), Gaps = 20/417 (4%)

Query: 73  RVLYLSEYGADPTGSEESSDAILKAVEDAFELQKKGTLEMVAGLNDLGGVVIDLQGGNYR 132
           RV +++ YGADPTG+ +S++A+L A+ DA     +G L  + G+++LGG  I+L+GGNY 
Sbjct: 82  RVYHVTSYGADPTGNSDSTEALLAAIADATNGPSEGYL--MEGISNLGGAQINLEGGNYM 139

Query: 133 ISKPITFPSSGGANVLVQGGTLRASDTFPGDRHLVELWSSNSKKLDRTESPQDDEGLNDM 192
           I + +  P SG  N+++ GGT++AS+ FP D ++++L S++S + D   SP         
Sbjct: 140 IRRSLKLPVSGVGNLMIHGGTIKASNDFPNDGYIIDL-STSSNENDGKNSPS-------- 190

Query: 193 KAQNNAIYYEDITFRDILFDSSYRGGGLFIIDSARIRINNCFFLHFATEGILVQQGHETF 252
               ++  +E IT +D+L DS++RGGG+ +I+S R  I+NC+  HF T GILVQ GHET+
Sbjct: 191 ----SSYNFEYITLKDLLLDSNFRGGGISVINSLRTNIDNCYITHFTTNGILVQSGHETY 246

Query: 253 ISSCFLGQHPTIGGDKGERDFSGVAIDLASNDNAVTDVAIFSAAIGVVLRGQANILTGVH 312
           I + FLGQH T GGDK ER+FSG  I++  NDNAVTDV IFSAAIG+++ GQAN  +GVH
Sbjct: 247 IRNSFLGQHITAGGDKNERNFSGTGINIQGNDNAVTDVVIFSAAIGIMVTGQANTFSGVH 306

Query: 313 CYNKATYFGGVGILVKLPGNSQTRIDNCYLDYTGIVMEDPVQVHVTNGLFLGDANVLVKS 372
           CYNKAT FGG GI +KLPG +QTRI N Y+DYT IV EDPVQ+H+++  FLGDAN+++KS
Sbjct: 307 CYNKATGFGGTGIYLKLPGLTQTRIVNSYMDYTSIVAEDPVQLHISSSFFLGDANIVLKS 366

Query: 373 VKGQVLGLNIVGNMFSGDPNKKVPIVKLD---GEFSNIDQVVIDRNNVNGMGLRSTVGKL 429
           +KG + G+ IV NMFSG  N+ V ++ LD   G F  IDQV +DRN   GM L++TV K 
Sbjct: 367 MKGVLNGVTIVDNMFSGS-NQGVEVIHLDKSNGPFHQIDQVTVDRNVATGMNLKATVAKR 425

Query: 430 TVSGNGTKWVADFSSVLVFPNRISHFQYSFYAQEEPKFLAHSVTNVSDNVVIVESEK 486
           ++ GNGT W  DF+++L+FPN I + QYS  +     F  H++ NVSDN V++E+ +
Sbjct: 426 SLQGNGTSWNVDFNNILLFPNLIKNVQYSL-SSTGSSFPNHAIRNVSDNRVVIETNE 481


>Medtr6g015785.1 | polygalacturonase QRT3-like protein | HC |
           chr6:5462771-5458842 | 20130731
          Length = 494

 Score =  396 bits (1018), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 213/422 (50%), Positives = 286/422 (67%), Gaps = 27/422 (6%)

Query: 80  YGADPTGSEESSDAILKAVEDAFELQKKGTLEMVAGLNDLGGVVIDLQGGNYRISKPITF 139
           YGADPTG+ +S+DA+L A+ DA +   KG L  + G+ DLGG  I+LQGGNY ISKP+ F
Sbjct: 93  YGADPTGNSDSTDALLAAIADAAKGPSKGFL--MNGIIDLGGAQINLQGGNYLISKPLHF 150

Query: 140 PSSGGANVLVQGGTLRASDTFPGDRHLVELWSSNSKKLDRTESPQDDEGLNDMKAQNNAI 199
           P +G  N+++ GGT++AS+ FP +++L++L +  S       SP  +             
Sbjct: 151 PMAGVGNLMIHGGTIKASNNFPSNKNLIDLSNFGS------TSPSYN------------- 191

Query: 200 YYEDITFRDILFDSSYRGGGLFIIDSARIRINNCFFLHFATEGILVQQGHETFISSCFLG 259
            YE IT +D+  DS+++GGG+ I +S RI I+NC+  HF T GILVQ GHET+I + F+G
Sbjct: 192 -YEYITLKDLFLDSNFKGGGISITNSLRINIDNCYITHFITNGILVQSGHETYIRNTFIG 250

Query: 260 QHPTIGGDKGERDFSGVAIDLASNDNAVTDVAIFSAAIGVVLRGQANILTGVHCYNKATY 319
           QH T GGDK ER FSG+ I L  NDNA+TDV IFSA IG+++ GQAN ++GVHCYNKA+ 
Sbjct: 251 QHITAGGDKNERKFSGIGISLQGNDNAITDVVIFSANIGIMITGQANTISGVHCYNKASG 310

Query: 320 FGGVGILVKLPGNSQTRIDNCYLDYTGIVMEDPVQVHVTNGLFLGDANVLVKSVKGQVLG 379
           FGG GI +KLPG +QTRI N Y+DYT IV EDPVQ+H+++  FLGDA +++KS+KG V G
Sbjct: 311 FGGTGIYLKLPGLTQTRIVNSYMDYTNIVAEDPVQLHISSSFFLGDAKIVLKSIKGIVNG 370

Query: 380 LNIVGNMFSGDPNKKVPIVKLD---GEFSNIDQVVIDRNNVNGMGLRSTVGKLTVSGNGT 436
           LNIV NMFSG  N    IVKLD     F  IDQV + RN VNGM L++T   +++ GNGT
Sbjct: 371 LNIVDNMFSGS-NHGDEIVKLDTSISPFKQIDQVFVARNVVNGMNLKATSAMISLHGNGT 429

Query: 437 KWVADFSSVLVFPNRISHFQYSFYAQEEPKFLAHSVTNVSDNVVIVESEKEAKGLVSFVV 496
            W+ADF+ +L+FPN I + QYS  A     F  H++ NVS N V++E+ +     V   V
Sbjct: 430 SWIADFNKILIFPNLIRNVQYSLSASGN-TFPNHALRNVSHNFVVIETSEAVTANVFVKV 488

Query: 497 EQ 498
           +Q
Sbjct: 489 DQ 490