Miyakogusa Predicted Gene

Lj4g3v0189920.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0189920.1 tr|G8A1V5|G8A1V5_MEDTR MMP37-like protein
OS=Medicago truncatula GN=MTR_126s0014 PE=4 SV=1,80.97,0,seg,NULL;
Mmp37,Mitochondrial matrix Mmp37; SUBFAMILY NOT NAMED,NULL;
UNCHARACTERIZED,Mitochondrial ,CUFF.46634.1
         (331 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g094760.1 | translocator assembly and maintenance-like pro...   508   e-144
Medtr4g094760.2 | translocator assembly and maintenance-like pro...   446   e-125
Medtr4g094760.4 | translocator assembly and maintenance-like pro...   396   e-110
Medtr4g094760.3 | translocator assembly and maintenance-like pro...   360   e-100

>Medtr4g094760.1 | translocator assembly and maintenance-like
           protein | HC | chr4:38915741-38921391 | 20130731
          Length = 331

 Score =  508 bits (1308), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 241/331 (72%), Positives = 270/331 (81%)

Query: 1   MDHTTTSFRSFLQVLPPVQFACVYGSSLHPTNQDKTSMVDYILGVSDPVQWHSENLKLNK 60
           MD+    F+SFLQ+LPPV+FACVYGSSLHPTN DKT+MVDYILGVSDP+QWHSENLK+NK
Sbjct: 1   MDNNAQDFQSFLQILPPVEFACVYGSSLHPTNHDKTTMVDYILGVSDPIQWHSENLKMNK 60

Query: 61  HHYASWMVHLGGERLITQVADKIGVGVHFNPFVTWNGKMFKYGVVRMDDLLQDVLYWEKF 120
           HHYASWMVHLGGERLIT VADKIGVGVHFNPFVTWNGKMFKYGVVRM DLLQDV YWEKF
Sbjct: 61  HHYASWMVHLGGERLITAVADKIGVGVHFNPFVTWNGKMFKYGVVRMHDLLQDVQYWEKF 120

Query: 121 YLCGRLQKPVHVVVDNLDIHGANSVNXXXXXXXXXXXXPSEFTTADLYAKVCSLSYLGDV 180
           YLCGRLQKPV +VVDNLDI   N +N            PSEFT ADLYAK+C+LSY+GDV
Sbjct: 121 YLCGRLQKPVQIVVDNLDIRKINYINLRAALSASLLLLPSEFTEADLYAKICNLSYMGDV 180

Query: 181 RMLFAEDKNKVKNIVSGQFDLFHSIYKPFLEEYEAKKLLRLSSTANRPIQVSQDCDXXXX 240
           RMLFAEDKNKVK IV+GQFDLFHS+Y+P+LEE+EAKKLL+LSSTAN  I+VSQDCD    
Sbjct: 181 RMLFAEDKNKVKKIVAGQFDLFHSMYRPYLEEFEAKKLLKLSSTANHQIEVSQDCDLSVS 240

Query: 241 XXXXXXXXXXXXXQMSMKQEQKMKLSETGRIVHDTIISSREEAANCXXXXXXXXXMVSSA 300
                        Q+SMKQ +++K S+TGR++HDT ISSREEAANC         MVSSA
Sbjct: 241 RSLVSALPPSIRSQLSMKQGEEVKPSQTGRVLHDTKISSREEAANCLQRILRRRVMVSSA 300

Query: 301 RQAISGLLAAGGVNATRYLAKKVSKAWKSWR 331
           RQAISGLLA GGVNAT Y+A K++KAWKSWR
Sbjct: 301 RQAISGLLAVGGVNATMYVANKINKAWKSWR 331


>Medtr4g094760.2 | translocator assembly and maintenance-like
           protein | HC | chr4:38915741-38921391 | 20130731
          Length = 294

 Score =  446 bits (1147), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 214/294 (72%), Positives = 238/294 (80%)

Query: 38  MVDYILGVSDPVQWHSENLKLNKHHYASWMVHLGGERLITQVADKIGVGVHFNPFVTWNG 97
           MVDYILGVSDP+QWHSENLK+NKHHYASWMVHLGGERLIT VADKIGVGVHFNPFVTWNG
Sbjct: 1   MVDYILGVSDPIQWHSENLKMNKHHYASWMVHLGGERLITAVADKIGVGVHFNPFVTWNG 60

Query: 98  KMFKYGVVRMDDLLQDVLYWEKFYLCGRLQKPVHVVVDNLDIHGANSVNXXXXXXXXXXX 157
           KMFKYGVVRM DLLQDV YWEKFYLCGRLQKPV +VVDNLDI   N +N           
Sbjct: 61  KMFKYGVVRMHDLLQDVQYWEKFYLCGRLQKPVQIVVDNLDIRKINYINLRAALSASLLL 120

Query: 158 XPSEFTTADLYAKVCSLSYLGDVRMLFAEDKNKVKNIVSGQFDLFHSIYKPFLEEYEAKK 217
            PSEFT ADLYAK+C+LSY+GDVRMLFAEDKNKVK IV+GQFDLFHS+Y+P+LEE+EAKK
Sbjct: 121 LPSEFTEADLYAKICNLSYMGDVRMLFAEDKNKVKKIVAGQFDLFHSMYRPYLEEFEAKK 180

Query: 218 LLRLSSTANRPIQVSQDCDXXXXXXXXXXXXXXXXXQMSMKQEQKMKLSETGRIVHDTII 277
           LL+LSSTAN  I+VSQDCD                 Q+SMKQ +++K S+TGR++HDT I
Sbjct: 181 LLKLSSTANHQIEVSQDCDLSVSRSLVSALPPSIRSQLSMKQGEEVKPSQTGRVLHDTKI 240

Query: 278 SSREEAANCXXXXXXXXXMVSSARQAISGLLAAGGVNATRYLAKKVSKAWKSWR 331
           SSREEAANC         MVSSARQAISGLLA GGVNAT Y+A K++KAWKSWR
Sbjct: 241 SSREEAANCLQRILRRRVMVSSARQAISGLLAVGGVNATMYVANKINKAWKSWR 294


>Medtr4g094760.4 | translocator assembly and maintenance-like
           protein | HC | chr4:38915741-38919269 | 20130731
          Length = 239

 Score =  396 bits (1017), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 185/233 (79%), Positives = 204/233 (87%)

Query: 1   MDHTTTSFRSFLQVLPPVQFACVYGSSLHPTNQDKTSMVDYILGVSDPVQWHSENLKLNK 60
           MD+    F+SFLQ+LPPV+FACVYGSSLHPTN DKT+MVDYILGVSDP+QWHSENLK+NK
Sbjct: 1   MDNNAQDFQSFLQILPPVEFACVYGSSLHPTNHDKTTMVDYILGVSDPIQWHSENLKMNK 60

Query: 61  HHYASWMVHLGGERLITQVADKIGVGVHFNPFVTWNGKMFKYGVVRMDDLLQDVLYWEKF 120
           HHYASWMVHLGGERLIT VADKIGVGVHFNPFVTWNGKMFKYGVVRM DLLQDV YWEKF
Sbjct: 61  HHYASWMVHLGGERLITAVADKIGVGVHFNPFVTWNGKMFKYGVVRMHDLLQDVQYWEKF 120

Query: 121 YLCGRLQKPVHVVVDNLDIHGANSVNXXXXXXXXXXXXPSEFTTADLYAKVCSLSYLGDV 180
           YLCGRLQKPV +VVDNLDI   N +N            PSEFT ADLYAK+C+LSY+GDV
Sbjct: 121 YLCGRLQKPVQIVVDNLDIRKINYINLRAALSASLLLLPSEFTEADLYAKICNLSYMGDV 180

Query: 181 RMLFAEDKNKVKNIVSGQFDLFHSIYKPFLEEYEAKKLLRLSSTANRPIQVSQ 233
           RMLFAEDKNKVK IV+GQFDLFHS+Y+P+LEE+EAKKLL+LSSTAN  I+VSQ
Sbjct: 181 RMLFAEDKNKVKKIVAGQFDLFHSMYRPYLEEFEAKKLLKLSSTANHQIEVSQ 233


>Medtr4g094760.3 | translocator assembly and maintenance-like
           protein | HC | chr4:38915764-38921364 | 20130731
          Length = 263

 Score =  360 bits (925), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 176/253 (69%), Positives = 198/253 (78%)

Query: 79  VADKIGVGVHFNPFVTWNGKMFKYGVVRMDDLLQDVLYWEKFYLCGRLQKPVHVVVDNLD 138
           VADKIGVGVHFNPFVTWNGKMFKYGVVRM DLLQDV YWEKFYLCGRLQKPV +VVDNLD
Sbjct: 11  VADKIGVGVHFNPFVTWNGKMFKYGVVRMHDLLQDVQYWEKFYLCGRLQKPVQIVVDNLD 70

Query: 139 IHGANSVNXXXXXXXXXXXXPSEFTTADLYAKVCSLSYLGDVRMLFAEDKNKVKNIVSGQ 198
           I   N +N            PSEFT ADLYAK+C+LSY+GDVRMLFAEDKNKVK IV+GQ
Sbjct: 71  IRKINYINLRAALSASLLLLPSEFTEADLYAKICNLSYMGDVRMLFAEDKNKVKKIVAGQ 130

Query: 199 FDLFHSIYKPFLEEYEAKKLLRLSSTANRPIQVSQDCDXXXXXXXXXXXXXXXXXQMSMK 258
           FDLFHS+Y+P+LEE+EAKKLL+LSSTAN  I+VSQDCD                 Q+SMK
Sbjct: 131 FDLFHSMYRPYLEEFEAKKLLKLSSTANHQIEVSQDCDLSVSRSLVSALPPSIRSQLSMK 190

Query: 259 QEQKMKLSETGRIVHDTIISSREEAANCXXXXXXXXXMVSSARQAISGLLAAGGVNATRY 318
           Q +++K S+TGR++HDT ISSREEAANC         MVSSARQAISGLLA GGVNAT Y
Sbjct: 191 QGEEVKPSQTGRVLHDTKISSREEAANCLQRILRRRVMVSSARQAISGLLAVGGVNATMY 250

Query: 319 LAKKVSKAWKSWR 331
           +A K++KAWKSWR
Sbjct: 251 VANKINKAWKSWR 263