Miyakogusa Predicted Gene
- Lj4g3v0189820.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v0189820.1 tr|I3SKG4|I3SKG4_MEDTR Peptidyl-prolyl cis-trans
isomerase OS=Medicago truncatula PE=2 SV=1,70.56,0,seg,NULL;
PEPTIDYLPROLYL ISOMERASE,NULL; PEPTIDYL-PROLYL CIS-TRANS
ISOMERASE,Peptidyl-prolyl cis-tra,CUFF.46622.1
(212 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g094785.1 | FKBP-type peptidyl-prolyl cis-trans isomerase ... 222 2e-58
Medtr8g091410.1 | FKBP-type peptidyl-prolyl cis-trans isomerase ... 100 7e-22
Medtr4g068190.1 | FKBP-type peptidyl-prolyl cis-trans isomerase ... 59 2e-09
Medtr5g008680.1 | FKBP-type peptidyl-prolyl cis-trans isomerase ... 56 3e-08
Medtr8g012380.1 | FKBP-type peptidyl-prolyl cis-trans isomerase ... 55 3e-08
Medtr8g006755.1 | FKBP-type peptidyl-prolyl cis-trans isomerase ... 49 3e-06
>Medtr4g094785.1 | FKBP-type peptidyl-prolyl cis-trans isomerase |
HC | chr4:38997044-38999561 | 20130731
Length = 240
Score = 222 bits (566), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 120/212 (56%), Positives = 136/212 (64%), Gaps = 7/212 (3%)
Query: 1 MSSLAPFSATGTCXXXXXXXXXXXXXXXXXXXXXXIKCAATQLQPPVTAQKESQFKRRDA 60
MSSLAP+S GTC + Q QPPV QK++Q KRR+A
Sbjct: 34 MSSLAPYSV-GTCLTSLQPQKLNHLNSLTTTCSVQV-----QQQPPVLVQKDNQLKRREA 87
Query: 61 IGLALSVGILQAFFPPK-PASAAVEAPPCELTAAPSGLAFCDKLVGTGPQAVKGQLIKAH 119
IGL+LS G+L + P P + A EA PC+LT APSGL++CDK+VG GPQAVKGQLIKAH
Sbjct: 88 IGLSLSFGLLHSLLQPIIPTATAAEAVPCQLTVAPSGLSYCDKVVGYGPQAVKGQLIKAH 147
Query: 120 YVGRLENGKIFDSSYNRGQPLTFRVGVGEVXXXXXXXXXXXXXXPPMLAGGKRTLKLPPE 179
YVGRLENGK+FDSSYNRG+PLTFRVGVGEV PPML GGKRTLKLPPE
Sbjct: 148 YVGRLENGKVFDSSYNRGKPLTFRVGVGEVIKGWDVGILGDDGIPPMLTGGKRTLKLPPE 207
Query: 180 LXXXXXXXXXXXXXXVIPPDSVLLFDVEFVSK 211
VIPPD+VLLFDVEFVSK
Sbjct: 208 FGYGSRGAGCKGGSCVIPPDAVLLFDVEFVSK 239
>Medtr8g091410.1 | FKBP-type peptidyl-prolyl cis-trans isomerase |
HC | chr8:38123529-38126176 | 20130731
Length = 213
Score = 100 bits (250), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 53/129 (41%), Positives = 68/129 (52%)
Query: 81 AAVEAPPCELTAAPSGLAFCDKLVGTGPQAVKGQLIKAHYVGRLENGKIFDSSYNRGQPL 140
A V P CEL SGL +CD + G G +A G+LI HY R +G +FDSSY R +PL
Sbjct: 76 ATVGEPMCELNYVKSGLGYCDYVEGFGDEAPLGELIDIHYTARFADGIVFDSSYKRARPL 135
Query: 141 TFRVGVGEVXXXXXXXXXXXXXXPPMLAGGKRTLKLPPELXXXXXXXXXXXXXXVIPPDS 200
T R+GVG+V PPM GGKR L +PP L IP ++
Sbjct: 136 TMRIGVGKVIRGLDQGILGGEGVPPMRIGGKRKLTIPPLLAYGPEPAGCFSGDCNIPGNA 195
Query: 201 VLLFDVEFV 209
LL+D++FV
Sbjct: 196 TLLYDIKFV 204
>Medtr4g068190.1 | FKBP-type peptidyl-prolyl cis-trans isomerase |
HC | chr4:25566272-25563052 | 20130731
Length = 229
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 61/141 (43%), Gaps = 25/141 (17%)
Query: 57 RRDAIGLALSVGILQAFFPPKPASAAVEAPP----------CE-------LTAAPSGLAF 99
RRD +GLAL V L F A+ PP CE + SGL +
Sbjct: 59 RRDFLGLALGVSTL--FIHSFDAANGAGLPPEEKPKLCDGTCEKELENVPMVTTESGLQY 116
Query: 100 CDKLVGTGPQAVKGQLIKAHYVGRLENGKIFDSSYNRGQPLTFRVGVGEVXXXXXXXXXX 159
D VG GP G + A+YV + +G+IFDSS +GQ FRVG G+V
Sbjct: 117 KDIKVGQGPSPPVGFQVAANYVAMVPSGQIFDSSLEKGQLYIFRVGSGQVIKGLDEGLLS 176
Query: 160 XXXXPPMLAGGKRTLKLPPEL 180
M GGKR L +P L
Sbjct: 177 ------MKVGGKRRLYIPGSL 191
>Medtr5g008680.1 | FKBP-type peptidyl-prolyl cis-trans isomerase |
HC | chr5:1867881-1872859 | 20130731
Length = 502
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 65/150 (43%), Gaps = 16/150 (10%)
Query: 63 LALSVGILQAFFPPKPASAAVEAPPCELTAAPSGLAFCDKLVG--TGPQAVKGQLIKAHY 120
+A +V + K EA P + P+GL D +G G +A G+ + Y
Sbjct: 361 IATTVESQKLSTSEKKEKEPTEAKPSNVRTYPNGLVIEDISMGKPDGKRADLGKKVSVKY 420
Query: 121 VGRLE-NGKIFDSSYNRGQPLTFRVGVGEVXXXXXXXXXXXXXXPPMLAGGKRTLKLPPE 179
G+L+ +GKIFDS + P FR+GVG+V M G KR L +PP
Sbjct: 421 TGKLQKDGKIFDSCAGKA-PFKFRLGVGQVIKGWDVGVNG------MRVGDKRRLTIPPS 473
Query: 180 LXXXXXXXXXXXXXXVIPPDSVLLFDVEFV 209
+ IP +S L+FDVE V
Sbjct: 474 MGYGDKRVGS------IPQNSWLVFDVELV 497
>Medtr8g012380.1 | FKBP-type peptidyl-prolyl cis-trans isomerase |
HC | chr8:3520636-3515863 | 20130731
Length = 151
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 47/101 (46%), Gaps = 11/101 (10%)
Query: 109 QAVKGQLIKAHYVGRLENGKIFDSSYNRGQPLTFRVGVGEVXXXXXXXXXXXXXXPPMLA 168
QA KG +K HY G+L +G +FDSS+ R P+ F +G G+V M
Sbjct: 46 QAHKGDKVKVHYRGKLTDGTVFDSSFERNNPIDFELGGGQVIKGWDQGLLG------MCL 99
Query: 169 GGKRTLKLPPELXXXXXXXXXXXXXXVIPPDSVLLFDVEFV 209
G KR LK+P +L IP + L+FD E V
Sbjct: 100 GEKRKLKIPAKL-----GYGEQGSPPTIPGGATLIFDTELV 135
>Medtr8g006755.1 | FKBP-type peptidyl-prolyl cis-trans isomerase |
HC | chr8:920971-928573 | 20130731
Length = 470
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 42/94 (44%), Gaps = 6/94 (6%)
Query: 87 PCELTAAPSGLAFCDKLVGTGPQAVKGQLIKAHYVGRLENGKIFDSSYNRGQPLTFRVGV 146
P SGL + D VG G GQ + HYVG E+G+ DS+Y +G P R+G
Sbjct: 341 PDNYITRDSGLIYRDFEVGEGDCPKDGQQVTFHYVGYNESGRRIDSTYLQGSPAKIRMG- 399
Query: 147 GEVXXXXXXXXXXXXXXPPMLAGGKRTLKLPPEL 180
M AGGKR + +PP+L
Sbjct: 400 -----NKALVPGFEEGIRDMRAGGKRRIIIPPDL 428