Miyakogusa Predicted Gene

Lj4g3v0189810.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0189810.1 tr|E9L577|E9L577_SOYBN CLE31 protein OS=Glycine
max PE=4 SV=1,53.54,1e-17,seg,NULL,CUFF.46621.1
         (122 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g437800.1 | CLE03 protein | HC | chr2:14922091-14924116 | ...    62   1e-10
Medtr2g437780.1 | hypothetical protein | HC | chr2:14913194-1491...    54   3e-08

>Medtr2g437800.1 | CLE03 protein | HC | chr2:14922091-14924116 |
           20130731
          Length = 152

 Score = 62.0 bits (149), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/84 (46%), Positives = 46/84 (54%), Gaps = 9/84 (10%)

Query: 39  TKEDAKKKKTIVATSTREGSKQSSKNDVVVEEEAAKGIHIPDQMQXXXXXXXXXXXXXXM 98
           TK+DAKK+   VATST E S Q+            KG  I D +Q               
Sbjct: 78  TKDDAKKRSNEVATSTNEESVQNL--------NTTKGNRISD-LQKHPKGRNSRASKPLF 128

Query: 99  QLQNRIFNASDHEVPSGPNPISNR 122
           Q +N+IFNAS+HEVPSGPNPISNR
Sbjct: 129 QWKNKIFNASEHEVPSGPNPISNR 152


>Medtr2g437780.1 | hypothetical protein | HC |
           chr2:14913194-14915486 | 20130731
          Length = 114

 Score = 53.9 bits (128), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 36/84 (42%), Positives = 44/84 (52%), Gaps = 9/84 (10%)

Query: 39  TKEDAKKKKTIVATSTREGSKQSSKNDVVVEEEAAKGIHIPDQMQXXXXXXXXXXXXXXM 98
           TK++AKK+   VATST E S Q+            KG  I D +Q               
Sbjct: 40  TKDEAKKRSDEVATSTNEESVQNLN--------TTKGNRISD-LQKHPKGRNSRASKPPF 90

Query: 99  QLQNRIFNASDHEVPSGPNPISNR 122
           Q +N+I NAS+ EVPSGPNPISNR
Sbjct: 91  QWKNKILNASEREVPSGPNPISNR 114