Miyakogusa Predicted Gene
- Lj4g3v0189760.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v0189760.1 Non Characterized Hit- tr|I1GU67|I1GU67_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,39.84,3e-18,seg,NULL; Ring finger,Zinc finger, RING-type;
zf-C3HC4_3,NULL; coiled-coil,NULL; no description,Zinc,CUFF.46617.1
(848 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g094795.1 | zinc finger, C3HC4 type (RING finger) protein ... 659 0.0
Medtr2g437720.1 | zinc finger, C3HC4 type (RING finger) protein ... 530 e-150
Medtr1g090803.1 | RING/U-box protein | HC | chr1:40822523-408290... 110 5e-24
Medtr1g090803.2 | RING/U-box protein | HC | chr1:40822523-408290... 110 5e-24
Medtr4g056600.1 | RING/U-box protein | HC | chr4:20801849-207945... 105 2e-22
Medtr4g056600.3 | RING/U-box protein | HC | chr4:20802079-207946... 105 2e-22
Medtr4g056600.4 | RING/U-box protein | HC | chr4:20802079-207945... 105 2e-22
Medtr4g056600.2 | RING/U-box protein | HC | chr4:20801849-207946... 105 2e-22
Medtr2g084475.3 | RING/U-box protein, putative | HC | chr2:35641... 103 6e-22
Medtr2g084475.5 | RING/U-box protein, putative | HC | chr2:35641... 103 6e-22
Medtr2g084475.4 | RING/U-box protein, putative | HC | chr2:35641... 103 6e-22
Medtr2g084475.2 | RING/U-box protein, putative | HC | chr2:35641... 103 6e-22
Medtr2g084475.1 | RING/U-box protein, putative | HC | chr2:35641... 103 6e-22
Medtr1g064680.1 | E3 ubiquitin-protein ligase | HC | chr1:284641... 52 3e-06
>Medtr4g094795.1 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr4:39016144-39012687 | 20130731
Length = 817
Score = 659 bits (1701), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/889 (49%), Positives = 546/889 (61%), Gaps = 124/889 (13%)
Query: 1 MASSQVGIASTSPFNRRDAWRDHIXXXXXXXXXXXXAPNQNAQKPIGNAKKNL-GTLSFT 59
MASSQV IAS F+ W + AKKN G+L+F
Sbjct: 1 MASSQVEIAS---FDSTPTWVSSV------------------------AKKNKPGSLNFN 33
Query: 60 RRIHNIFREKDDSSLSALVSPRHKRIIDRWAAKQAQEAVTTTNCHDE---VEVFDDFPHR 116
++ N+F +K+DSSLSALVSPRH +IIDRWAA+QAQE ++E V+ FD+FP R
Sbjct: 34 KKFPNVFGDKNDSSLSALVSPRHSKIIDRWAARQAQEVAKNLEKNNENVVVKRFDNFPSR 93
Query: 117 REAS------VSPPRSDGSTKSEVS-SLGASSLVQIWEKRLNKSKPCTPAASPGRITTSP 169
+ VSPPRSDGS++SE + ++GASSLVQ+WEKRLN CT +P + T+
Sbjct: 94 SSSFNSRRGSVSPPRSDGSSESEKTFNIGASSLVQMWEKRLNNQSNCTKQNAPSYVRTNS 153
Query: 170 DIAGLCNENASCPVEEQCRVSEEGESSDEPQCNEESSPNWESEKTSLNDQSCSLKVQ-SL 228
D + NE + VEE E+GESSDE S ++ + S+ D++CS KV +L
Sbjct: 154 DASS--NEINASSVEE----PEKGESSDEAY----SYGEYDKPRLSI-DETCSPKVHYNL 202
Query: 229 DAAERERGRVANIIKRLAVTNQMQSPVSLISNDNDNNEPCSA------STPKLKQSEHRV 282
DA + E+ +VA+IIK+L+VTN ++ND+ + SA STPK + +EHR
Sbjct: 203 DAFKSEKIKVADIIKKLSVTN----------DENDHEQSNSATGSPCISTPK-QLAEHRG 251
Query: 283 FAQVISSPRIRGRQAFNDLIMQFENERHGELNNLAERGAVTKFTQRGRIQSVLRLRLLQR 342
F QV S PRIRGRQAFNDLIMQFE +RHGELNNLAERGAV+KFTQRGRIQS+LRLRLLQR
Sbjct: 252 FGQVTSHPRIRGRQAFNDLIMQFECDRHGELNNLAERGAVSKFTQRGRIQSLLRLRLLQR 311
Query: 343 GVAVFEQSPTK--------------------SAASEVNRQQQGSVIVQLRERFNTGDEHR 382
GVA F+ S K S E N++QQGSVI+QLRERFNT DE +
Sbjct: 312 GVAAFDPSSLKLTTLEGNKKQSTTPEGNKKQSTTPEGNKKQQGSVIMQLRERFNTKDEQK 371
Query: 383 TSALAEVSDSRSPSGEIGSNTPQLDNFPTSNQLXXXXXXXXXXXXXIHCKEPVQNSISQT 442
TS+L EVS+ RS E +NT QL+ F T+NQL IH K+ N +SQT
Sbjct: 372 TSSLIEVSEPRSIDRETINNTAQLNKFHTTNQL-NKEIVCSKIVTNIHTKKNKLNVVSQT 430
Query: 443 SADKNKEAHPSSDVTFQRTLFEAQSDDAKETTEASSSIADSNANEAVVKVEASYQKQHAT 502
AD +EA + + F+ Q+ KE SS DSNAN+ KVEA Q+ + T
Sbjct: 431 RADIKEEAR----IIYG---FDPQNHGPKEIPVELSSKVDSNANDITDKVEARDQQLYDT 483
Query: 503 AEPS-YDEIVEEEEASDQNYDE--ARYDWISQISRPRSYWEELRHAWYQKMLDFGSHNDD 559
E + Y+E++EE+E SD NYDE A YDW S ISRPRSYWEELR WY++MLDF S ND+
Sbjct: 484 IETNYYNEMLEEKECSDYNYDEISASYDWASPISRPRSYWEELRQEWYKEMLDFASDNDE 543
Query: 560 RRNLLERRTVSTVLSCDDFRKRMDRMMKSHMGTQTDLVNSQYDMED-EGNMEQLMAFFHD 618
RR LLER+TVSTVLS DFR++MD++M+SH+GTQT LVN+Q D ED EGN +QLMAF+HD
Sbjct: 544 RRKLLERKTVSTVLS-SDFREKMDKLMESHVGTQTHLVNNQCDEEDEEGNTKQLMAFYHD 602
Query: 619 RLRSRGSPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSTICSGSDHELGDYFNQTPLS 678
RLR +I SGSDHELGD Q+ S
Sbjct: 603 RLRD------------TREKETRSNEEEMDEEKVEEHEHESISSGSDHELGDC--QSSSS 648
Query: 679 MNTPSSSTWSYRDPDAGDDSDRVAXXXXXXX---------XXXXXXXANHHSIEMEYIYD 729
+TPSS+TWSYRD D GDDSDRVA AN SIEME IY
Sbjct: 649 ADTPSSATWSYRDTDIGDDSDRVAFVSSPLPSQSQSCYEDSRENSPSANQRSIEMEIIYG 708
Query: 730 MHGQMVQLFHEMSELRKSIKSCMDMQMQLQKSKYQKVHPVKEEEAKESLNRTPKKGICGI 789
+ GQM QLF E+SELRK+IK+C D QMQ+Q + Q V + + K+S N+T KKG+C I
Sbjct: 709 LRGQMEQLFQEISELRKTIKNCADTQMQMQLQQSQNQE-VHKFKDKKSSNKTSKKGMCCI 767
Query: 790 CYENKVNSVLYRCGHMCACFKCANELQWNRGKCPICKAEIIDVIRVHTN 838
C ENKVNSVLYRCGHMCAC CANELQW GKCPIC+ IIDV++VHTN
Sbjct: 768 CNENKVNSVLYRCGHMCACLNCANELQWKSGKCPICQVAIIDVVKVHTN 816
>Medtr2g437720.1 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr2:14865351-14860695 | 20130731
Length = 915
Score = 530 bits (1365), Expect = e-150, Method: Compositional matrix adjust.
Identities = 370/838 (44%), Positives = 479/838 (57%), Gaps = 108/838 (12%)
Query: 69 KDDSSLSALVSPRHKRIIDRWAAKQAQEAVTTTNCHDEVEVFDDFPHRREASVSPP---- 124
+++ SL++L+SPRH R++DRWAA+QA+E V+ N +E E+ + + P
Sbjct: 113 ENEPSLASLISPRHSRLLDRWAARQAREMVS--NLENEAELLSIDDNTNNNNDMPAVVRT 170
Query: 125 --RSDGSTKSEVSSLGASSLVQIWEKRLNKS---KPCTPA--ASPGRIT----------- 166
+ SE ++GASSLVQ+WEKRLN S KP TP SP +T
Sbjct: 171 SSSTSDECSSEKLNVGASSLVQLWEKRLNNSNGSKPNTPMEKTSPTGVTSATCNNENVFV 230
Query: 167 -------TSP--DIAGLCNENASCPVEEQCRVSEEGESSDEP--QCNEESS-----PNWE 210
TSP + CN VEEQ R SE GE + P NEES +W+
Sbjct: 231 VNTPIEKTSPTGGASATCNNVNVFVVEEQ-RGSEIGEGFEGPLSSGNEESFSFSSFTDWD 289
Query: 211 SEKTSLNDQSCSLKVQSLDAAERERGRVANIIKRLAVTNQMQSPVSLISNDNDNNEPCS- 269
S+KT + CS+ +++E +R VA+IIK+L T+Q QS ++ND+ E C
Sbjct: 290 SDKTGDQSRLCSVDQSRKNSSESDRVSVADIIKKLTATSQTQSSPPSSGDENDH-EGCGG 348
Query: 270 ---ASTPKL----KQSEHRVFAQVISSPRIRGRQAFNDLIMQFENERHGELNNLAERGAV 322
AS+P+ + SE R F QV S RIRGR+AFNDL+MQ E +RHGEL NLAERG V
Sbjct: 349 GSVASSPRKDFAPELSEQRAFPQVTCSTRIRGRRAFNDLLMQLERDRHGELKNLAERGTV 408
Query: 323 TKFTQRGRIQSVLRLRLLQRGVAVFEQSPTKSAASEVNRQQQ--GSVIVQLRERFNTGDE 380
+KF Q+GRIQ++LRL+LL RG A S KS +SEV R+ Q GS I+QLR F+T E
Sbjct: 409 SKFAQKGRIQALLRLKLL-RGAAANVPSHQKSTSSEVYRRVQPHGSAIMQLRRNFSTRVE 467
Query: 381 HRTSALAEVSDSRSPSGEIGSNTPQLDNFPTSNQLXXXXXXXXXXXXXIHCKEPVQNSIS 440
+ + AEV+++RSP EI +N QL+N T++Q+ +H ++
Sbjct: 468 EKNTVQAEVANTRSPPKEIVNNITQLENSTTADQI-----SKDTSGQIVHGTVSRAIELT 522
Query: 441 QTSADKNKEAHPSSDVTFQRTLFEAQSDDAKETTEASSSIADSNANEAVVKVEASYQKQH 500
++ ++E HPSS V Q T FEAQ D ++E E + D + + V+ EAS Q
Sbjct: 523 KSETQTSEEDHPSSTVMSQETCFEAQHDYSEE--EEINQQNDETSCDCAVEEEASNQNY- 579
Query: 501 ATAEPSYDEIVEEEEASDQNYDEARYDWISQISRPRSYWEELRHAWYQKMLDFGSHNDDR 560
AE SY+E+VEE NYDE YDWIS+ISRPRSYWEE R AWY+++LD GS N+D
Sbjct: 580 --AESSYEEMVEE------NYDENNYDWISEISRPRSYWEEQRQAWYREILDTGSPNEDI 631
Query: 561 RNLLERRTVSTVLSCDDFRKRMDRMMKSHMGTQTDLVNSQYDMEDEGNMEQLMAFFHDRL 620
+ LL+RRTVST LS FR+ MDR+M+SH GTQT LV+SQ +DE + E LMAFF + L
Sbjct: 632 QVLLQRRTVSTFLS-SGFRETMDRLMQSHRGTQTHLVSSQ---DDEIDNEGLMAFFQEHL 687
Query: 621 RSRGSPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSTICSGSD------------HEL 668
SPQ + G + HE+
Sbjct: 688 YPGRSPQENGTERTVDEEEERVNEEEEEKQDEKEHEEEQ---GGESLISSSLVSSLCHEV 744
Query: 669 GDYFNQTPLSMNTPSSSTWSYRDPDAGDDSDRVAXXXXXXXXXX--------XXXXANHH 720
GDY NQ SS+WSYRD +AGDD DRVA NHH
Sbjct: 745 GDYSNQ---------SSSWSYRDNEAGDDFDRVASTSSQPYQSQSSYHDNRPNSASTNHH 795
Query: 721 SIEMEYIYDMHGQMVQLFHEMSELRKSIKSC--MDMQMQLQKSKYQKVHPVKEEEAKESL 778
SIEM+ IYDM G M QL+ EMSELRKSIKSC M MQMQLQKS Q+V ++EE K+S
Sbjct: 796 SIEMDLIYDMRGHMEQLYQEMSELRKSIKSCMDMQMQMQLQKSNNQRVQTAEKEE-KKSH 854
Query: 779 NRTPKKGICGICYENKVNSVLYRCGHMCACFKCANELQWNRGKCPICKAEIIDVIRVH 836
N+T KKG C IC E KV+SVLYRCGHMCAC KCAN+L+WN GKCPIC+A I DV+RV+
Sbjct: 855 NKTGKKGNCCICNEMKVDSVLYRCGHMCACLKCANDLRWNNGKCPICRANIDDVVRVY 912
>Medtr1g090803.1 | RING/U-box protein | HC | chr1:40822523-40829027
| 20130731
Length = 851
Score = 110 bits (275), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 77/127 (60%), Gaps = 11/127 (8%)
Query: 722 IEMEYIYDMHGQMVQLFHEMSELRKSIKSCMDMQMQLQKSKYQKVHPVKEEEAKE----- 776
IE E + D+ M +L M+ +++ +++CMDMQ++LQ+S Q+V A E
Sbjct: 723 IEWEIMNDLRSDMARLQQGMNHMQRMLEACMDMQLELQRSVRQEVSAALNRSAGENGLAA 782
Query: 777 ------SLNRTPKKGICGICYENKVNSVLYRCGHMCACFKCANELQWNRGKCPICKAEII 830
S KKG C +C +N ++S+LYRCGHMC C KCA+EL GKCP+C+A I+
Sbjct: 783 GTSDDGSKWGHVKKGTCCVCCDNHIDSLLYRCGHMCTCSKCASELIRGGGKCPLCRAPIV 842
Query: 831 DVIRVHT 837
+V+R ++
Sbjct: 843 EVVRAYS 849
Score = 82.4 bits (202), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 109/394 (27%), Positives = 157/394 (39%), Gaps = 69/394 (17%)
Query: 68 EKDDSSLSALVSPRHKRIIDRWAAKQAQEAVTTTNCHDE------------VEVFDDFPH 115
E DD + S+ RH RI+ RWAA+QAQE +TT + V + D
Sbjct: 67 EGDDLAESSAARRRHSRILSRWAARQAQEMITTIERRNRESELMALAGLHTVSMLDSSFL 126
Query: 116 RREASVSPPRSDGSTKSEVSSLGASSLVQIWEKRLNKSKPCTPAASPGRITTSPDIAGLC 175
R S P S E S ASS++Q+W + L A R +
Sbjct: 127 RGSQS---PTSGQEGAVERPSTQASSILQMW-RELEDEHMLNRARERMRERLRQQRSSDA 182
Query: 176 NENASCPVEEQCRVSEEGESSDEPQCNEESSPNWESE----KTSLNDQSCSLKVQSLDAA 231
N N S + + R SE S + +E W + + +L ++ S + QS D
Sbjct: 183 NTNVSSTMSD-SRGSENRGSLGDASESENDYGTWSHDQIGSRNALGNRDGSSREQSPDLG 241
Query: 232 ERERGRVANIIKRLAVTNQMQSPVSLISNDNDNN-----------------EPCSASTPK 274
E ER RV I+ R + + + S +S N N+ E ++ +
Sbjct: 242 EVERERVRQIV-RGWMESGISDRSSNVSQRNTNHRSEWLGETERERVRIVREWVQMTSQQ 300
Query: 275 LKQSEHRVFAQVISSP-------------------------RIRGRQAFNDLIMQFENER 309
R AQV S R+RGRQA DL+++ E ER
Sbjct: 301 RGSRGSRRDAQVSQSAPADRTRDIAADHDERQPEHVRRDMLRLRGRQALVDLLVRVERER 360
Query: 310 HGELNNLAERGAVTKFTQRGRIQSVLRLRLLQRGVAVFEQSPTKSAASEVNRQQQGSVIV 369
EL L E AV+ F R RIQS+LR R L R V ++ P +AASE+ + +Q +
Sbjct: 361 QRELEGLLEHRAVSDFAHRNRIQSLLRGRFL-RNETVEDERPPSTAASELVQLRQRHTVS 419
Query: 370 QLRERFNTGDEHRTSALAEVSDSRSPSGEIGSNT 403
+RE F + R + S +P SNT
Sbjct: 420 GIREGFRS----RLENIVRGQSSTNPDATSNSNT 449
>Medtr1g090803.2 | RING/U-box protein | HC | chr1:40822523-40829027
| 20130731
Length = 851
Score = 110 bits (275), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 77/127 (60%), Gaps = 11/127 (8%)
Query: 722 IEMEYIYDMHGQMVQLFHEMSELRKSIKSCMDMQMQLQKSKYQKVHPVKEEEAKE----- 776
IE E + D+ M +L M+ +++ +++CMDMQ++LQ+S Q+V A E
Sbjct: 723 IEWEIMNDLRSDMARLQQGMNHMQRMLEACMDMQLELQRSVRQEVSAALNRSAGENGLAA 782
Query: 777 ------SLNRTPKKGICGICYENKVNSVLYRCGHMCACFKCANELQWNRGKCPICKAEII 830
S KKG C +C +N ++S+LYRCGHMC C KCA+EL GKCP+C+A I+
Sbjct: 783 GTSDDGSKWGHVKKGTCCVCCDNHIDSLLYRCGHMCTCSKCASELIRGGGKCPLCRAPIV 842
Query: 831 DVIRVHT 837
+V+R ++
Sbjct: 843 EVVRAYS 849
Score = 82.4 bits (202), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 109/394 (27%), Positives = 157/394 (39%), Gaps = 69/394 (17%)
Query: 68 EKDDSSLSALVSPRHKRIIDRWAAKQAQEAVTTTNCHDE------------VEVFDDFPH 115
E DD + S+ RH RI+ RWAA+QAQE +TT + V + D
Sbjct: 67 EGDDLAESSAARRRHSRILSRWAARQAQEMITTIERRNRESELMALAGLHTVSMLDSSFL 126
Query: 116 RREASVSPPRSDGSTKSEVSSLGASSLVQIWEKRLNKSKPCTPAASPGRITTSPDIAGLC 175
R S P S E S ASS++Q+W + L A R +
Sbjct: 127 RGSQS---PTSGQEGAVERPSTQASSILQMW-RELEDEHMLNRARERMRERLRQQRSSDA 182
Query: 176 NENASCPVEEQCRVSEEGESSDEPQCNEESSPNWESE----KTSLNDQSCSLKVQSLDAA 231
N N S + + R SE S + +E W + + +L ++ S + QS D
Sbjct: 183 NTNVSSTMSD-SRGSENRGSLGDASESENDYGTWSHDQIGSRNALGNRDGSSREQSPDLG 241
Query: 232 ERERGRVANIIKRLAVTNQMQSPVSLISNDNDNN-----------------EPCSASTPK 274
E ER RV I+ R + + + S +S N N+ E ++ +
Sbjct: 242 EVERERVRQIV-RGWMESGISDRSSNVSQRNTNHRSEWLGETERERVRIVREWVQMTSQQ 300
Query: 275 LKQSEHRVFAQVISSP-------------------------RIRGRQAFNDLIMQFENER 309
R AQV S R+RGRQA DL+++ E ER
Sbjct: 301 RGSRGSRRDAQVSQSAPADRTRDIAADHDERQPEHVRRDMLRLRGRQALVDLLVRVERER 360
Query: 310 HGELNNLAERGAVTKFTQRGRIQSVLRLRLLQRGVAVFEQSPTKSAASEVNRQQQGSVIV 369
EL L E AV+ F R RIQS+LR R L R V ++ P +AASE+ + +Q +
Sbjct: 361 QRELEGLLEHRAVSDFAHRNRIQSLLRGRFL-RNETVEDERPPSTAASELVQLRQRHTVS 419
Query: 370 QLRERFNTGDEHRTSALAEVSDSRSPSGEIGSNT 403
+RE F + R + S +P SNT
Sbjct: 420 GIREGFRS----RLENIVRGQSSTNPDATSNSNT 449
>Medtr4g056600.1 | RING/U-box protein | HC | chr4:20801849-20794537
| 20130731
Length = 818
Score = 105 bits (262), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 80/130 (61%), Gaps = 12/130 (9%)
Query: 720 HSIEMEYIYDMHGQMVQLFHEMSELRKSIKSCMDMQMQLQKSKYQKVHPVKEEEAK---- 775
H+ ++E I D+ M +L M+ +++ +++CMDMQ++LQ+S Q+V A
Sbjct: 687 HNDDLEIINDLRLDMARLQQRMNTMQRMLEACMDMQLELQRSIKQEVSAALNRSAGSSGI 746
Query: 776 ---ESLNRTPK-----KGICGICYENKVNSVLYRCGHMCACFKCANELQWNRGKCPICKA 827
+SL+ K KG+C IC E+ ++S+LYRCGH+C C CANEL +R CP+C A
Sbjct: 747 RECDSLDDNSKWECVRKGLCCICCESNIDSLLYRCGHLCTCSGCANELLQSRRNCPMCHA 806
Query: 828 EIIDVIRVHT 837
+++VIR ++
Sbjct: 807 PVLEVIRTYS 816
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 57/105 (54%), Gaps = 5/105 (4%)
Query: 291 RIRGRQAFNDLIMQFENERHGELNNLAERGAVTKFTQRGRIQSVLRLRLLQRGVAVFEQS 350
++RGRQ D++ + E ER E++ L + AV++F R RIQ++LR R L+ +V
Sbjct: 234 KLRGRQVMLDMLKKAERERQREIHELLDHQAVSRFPHRNRIQALLRGRFLRNDRSVDHNR 293
Query: 351 PTKSAASEVNRQQQGSVIVQLRERF-----NTGDEHRTSALAEVS 390
T A SE+ +Q + LRE F +TG TS L++ S
Sbjct: 294 STSVAESELGLLRQRQTVSGLREGFFSRMDSTGCSQATSNLSDTS 338
>Medtr4g056600.3 | RING/U-box protein | HC | chr4:20802079-20794612
| 20130731
Length = 818
Score = 105 bits (262), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 80/130 (61%), Gaps = 12/130 (9%)
Query: 720 HSIEMEYIYDMHGQMVQLFHEMSELRKSIKSCMDMQMQLQKSKYQKVHPVKEEEAK---- 775
H+ ++E I D+ M +L M+ +++ +++CMDMQ++LQ+S Q+V A
Sbjct: 687 HNDDLEIINDLRLDMARLQQRMNTMQRMLEACMDMQLELQRSIKQEVSAALNRSAGSSGI 746
Query: 776 ---ESLNRTPK-----KGICGICYENKVNSVLYRCGHMCACFKCANELQWNRGKCPICKA 827
+SL+ K KG+C IC E+ ++S+LYRCGH+C C CANEL +R CP+C A
Sbjct: 747 RECDSLDDNSKWECVRKGLCCICCESNIDSLLYRCGHLCTCSGCANELLQSRRNCPMCHA 806
Query: 828 EIIDVIRVHT 837
+++VIR ++
Sbjct: 807 PVLEVIRTYS 816
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 57/105 (54%), Gaps = 5/105 (4%)
Query: 291 RIRGRQAFNDLIMQFENERHGELNNLAERGAVTKFTQRGRIQSVLRLRLLQRGVAVFEQS 350
++RGRQ D++ + E ER E++ L + AV++F R RIQ++LR R L+ +V
Sbjct: 234 KLRGRQVMLDMLKKAERERQREIHELLDHQAVSRFPHRNRIQALLRGRFLRNDRSVDHNR 293
Query: 351 PTKSAASEVNRQQQGSVIVQLRERF-----NTGDEHRTSALAEVS 390
T A SE+ +Q + LRE F +TG TS L++ S
Sbjct: 294 STSVAESELGLLRQRQTVSGLREGFFSRMDSTGCSQATSNLSDTS 338
>Medtr4g056600.4 | RING/U-box protein | HC | chr4:20802079-20794537
| 20130731
Length = 818
Score = 105 bits (262), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 80/130 (61%), Gaps = 12/130 (9%)
Query: 720 HSIEMEYIYDMHGQMVQLFHEMSELRKSIKSCMDMQMQLQKSKYQKVHPVKEEEAK---- 775
H+ ++E I D+ M +L M+ +++ +++CMDMQ++LQ+S Q+V A
Sbjct: 687 HNDDLEIINDLRLDMARLQQRMNTMQRMLEACMDMQLELQRSIKQEVSAALNRSAGSSGI 746
Query: 776 ---ESLNRTPK-----KGICGICYENKVNSVLYRCGHMCACFKCANELQWNRGKCPICKA 827
+SL+ K KG+C IC E+ ++S+LYRCGH+C C CANEL +R CP+C A
Sbjct: 747 RECDSLDDNSKWECVRKGLCCICCESNIDSLLYRCGHLCTCSGCANELLQSRRNCPMCHA 806
Query: 828 EIIDVIRVHT 837
+++VIR ++
Sbjct: 807 PVLEVIRTYS 816
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 57/105 (54%), Gaps = 5/105 (4%)
Query: 291 RIRGRQAFNDLIMQFENERHGELNNLAERGAVTKFTQRGRIQSVLRLRLLQRGVAVFEQS 350
++RGRQ D++ + E ER E++ L + AV++F R RIQ++LR R L+ +V
Sbjct: 234 KLRGRQVMLDMLKKAERERQREIHELLDHQAVSRFPHRNRIQALLRGRFLRNDRSVDHNR 293
Query: 351 PTKSAASEVNRQQQGSVIVQLRERF-----NTGDEHRTSALAEVS 390
T A SE+ +Q + LRE F +TG TS L++ S
Sbjct: 294 STSVAESELGLLRQRQTVSGLREGFFSRMDSTGCSQATSNLSDTS 338
>Medtr4g056600.2 | RING/U-box protein | HC | chr4:20801849-20794612
| 20130731
Length = 818
Score = 105 bits (262), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 80/130 (61%), Gaps = 12/130 (9%)
Query: 720 HSIEMEYIYDMHGQMVQLFHEMSELRKSIKSCMDMQMQLQKSKYQKVHPVKEEEAK---- 775
H+ ++E I D+ M +L M+ +++ +++CMDMQ++LQ+S Q+V A
Sbjct: 687 HNDDLEIINDLRLDMARLQQRMNTMQRMLEACMDMQLELQRSIKQEVSAALNRSAGSSGI 746
Query: 776 ---ESLNRTPK-----KGICGICYENKVNSVLYRCGHMCACFKCANELQWNRGKCPICKA 827
+SL+ K KG+C IC E+ ++S+LYRCGH+C C CANEL +R CP+C A
Sbjct: 747 RECDSLDDNSKWECVRKGLCCICCESNIDSLLYRCGHLCTCSGCANELLQSRRNCPMCHA 806
Query: 828 EIIDVIRVHT 837
+++VIR ++
Sbjct: 807 PVLEVIRTYS 816
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 57/105 (54%), Gaps = 5/105 (4%)
Query: 291 RIRGRQAFNDLIMQFENERHGELNNLAERGAVTKFTQRGRIQSVLRLRLLQRGVAVFEQS 350
++RGRQ D++ + E ER E++ L + AV++F R RIQ++LR R L+ +V
Sbjct: 234 KLRGRQVMLDMLKKAERERQREIHELLDHQAVSRFPHRNRIQALLRGRFLRNDRSVDHNR 293
Query: 351 PTKSAASEVNRQQQGSVIVQLRERF-----NTGDEHRTSALAEVS 390
T A SE+ +Q + LRE F +TG TS L++ S
Sbjct: 294 STSVAESELGLLRQRQTVSGLREGFFSRMDSTGCSQATSNLSDTS 338
>Medtr2g084475.3 | RING/U-box protein, putative | HC |
chr2:35641571-35646787 | 20130731
Length = 835
Score = 103 bits (258), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 74/122 (60%), Gaps = 11/122 (9%)
Query: 727 IYDMHGQMVQLFHEMSELRKSIKSCMDMQMQLQKSKYQKVHPVKEEEA-----------K 775
I D+ MV+L M+ +++ +++CMDMQ++LQ+S Q+V
Sbjct: 713 ISDLRIDMVRLQQRMNNMQRMLEACMDMQLELQRSIRQEVSAALNRSTGSSGVHDHVSPD 772
Query: 776 ESLNRTPKKGICGICYENKVNSVLYRCGHMCACFKCANELQWNRGKCPICKAEIIDVIRV 835
ES +KG+C IC E ++ +LYRCGHMC C KCAN+L +R KCP+C+A +++VIR
Sbjct: 773 ESKWECVRKGLCCICCEGSIDCLLYRCGHMCTCSKCANQLLDSRKKCPMCRAPVVEVIRA 832
Query: 836 HT 837
++
Sbjct: 833 YS 834
>Medtr2g084475.5 | RING/U-box protein, putative | HC |
chr2:35641571-35646787 | 20130731
Length = 835
Score = 103 bits (258), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 74/122 (60%), Gaps = 11/122 (9%)
Query: 727 IYDMHGQMVQLFHEMSELRKSIKSCMDMQMQLQKSKYQKVHPVKEEEA-----------K 775
I D+ MV+L M+ +++ +++CMDMQ++LQ+S Q+V
Sbjct: 713 ISDLRIDMVRLQQRMNNMQRMLEACMDMQLELQRSIRQEVSAALNRSTGSSGVHDHVSPD 772
Query: 776 ESLNRTPKKGICGICYENKVNSVLYRCGHMCACFKCANELQWNRGKCPICKAEIIDVIRV 835
ES +KG+C IC E ++ +LYRCGHMC C KCAN+L +R KCP+C+A +++VIR
Sbjct: 773 ESKWECVRKGLCCICCEGSIDCLLYRCGHMCTCSKCANQLLDSRKKCPMCRAPVVEVIRA 832
Query: 836 HT 837
++
Sbjct: 833 YS 834
>Medtr2g084475.4 | RING/U-box protein, putative | HC |
chr2:35641571-35646787 | 20130731
Length = 860
Score = 103 bits (258), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 74/122 (60%), Gaps = 11/122 (9%)
Query: 727 IYDMHGQMVQLFHEMSELRKSIKSCMDMQMQLQKSKYQKVHPVKEEEA-----------K 775
I D+ MV+L M+ +++ +++CMDMQ++LQ+S Q+V
Sbjct: 738 ISDLRIDMVRLQQRMNNMQRMLEACMDMQLELQRSIRQEVSAALNRSTGSSGVHDHVSPD 797
Query: 776 ESLNRTPKKGICGICYENKVNSVLYRCGHMCACFKCANELQWNRGKCPICKAEIIDVIRV 835
ES +KG+C IC E ++ +LYRCGHMC C KCAN+L +R KCP+C+A +++VIR
Sbjct: 798 ESKWECVRKGLCCICCEGSIDCLLYRCGHMCTCSKCANQLLDSRKKCPMCRAPVVEVIRA 857
Query: 836 HT 837
++
Sbjct: 858 YS 859
>Medtr2g084475.2 | RING/U-box protein, putative | HC |
chr2:35641571-35646787 | 20130731
Length = 860
Score = 103 bits (258), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 74/122 (60%), Gaps = 11/122 (9%)
Query: 727 IYDMHGQMVQLFHEMSELRKSIKSCMDMQMQLQKSKYQKVHPVKEEEA-----------K 775
I D+ MV+L M+ +++ +++CMDMQ++LQ+S Q+V
Sbjct: 738 ISDLRIDMVRLQQRMNNMQRMLEACMDMQLELQRSIRQEVSAALNRSTGSSGVHDHVSPD 797
Query: 776 ESLNRTPKKGICGICYENKVNSVLYRCGHMCACFKCANELQWNRGKCPICKAEIIDVIRV 835
ES +KG+C IC E ++ +LYRCGHMC C KCAN+L +R KCP+C+A +++VIR
Sbjct: 798 ESKWECVRKGLCCICCEGSIDCLLYRCGHMCTCSKCANQLLDSRKKCPMCRAPVVEVIRA 857
Query: 836 HT 837
++
Sbjct: 858 YS 859
>Medtr2g084475.1 | RING/U-box protein, putative | HC |
chr2:35641571-35646787 | 20130731
Length = 835
Score = 103 bits (258), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 74/122 (60%), Gaps = 11/122 (9%)
Query: 727 IYDMHGQMVQLFHEMSELRKSIKSCMDMQMQLQKSKYQKVHPVKEEEA-----------K 775
I D+ MV+L M+ +++ +++CMDMQ++LQ+S Q+V
Sbjct: 713 ISDLRIDMVRLQQRMNNMQRMLEACMDMQLELQRSIRQEVSAALNRSTGSSGVHDHVSPD 772
Query: 776 ESLNRTPKKGICGICYENKVNSVLYRCGHMCACFKCANELQWNRGKCPICKAEIIDVIRV 835
ES +KG+C IC E ++ +LYRCGHMC C KCAN+L +R KCP+C+A +++VIR
Sbjct: 773 ESKWECVRKGLCCICCEGSIDCLLYRCGHMCTCSKCANQLLDSRKKCPMCRAPVVEVIRA 832
Query: 836 HT 837
++
Sbjct: 833 YS 834
>Medtr1g064680.1 | E3 ubiquitin-protein ligase | HC |
chr1:28464133-28468044 | 20130731
Length = 350
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 29/55 (52%)
Query: 787 CGICYENKVNSVLYRCGHMCACFKCANELQWNRGKCPICKAEIIDVIRVHTNPEP 841
C IC N+ + C HMC C CA L++ +CPIC+ + ++ + PEP
Sbjct: 292 CVICLSEPRNTTVLPCRHMCMCSGCAKVLRFQTNRCPICRQPVERLLEIKVGPEP 346