Miyakogusa Predicted Gene

Lj4g3v0189750.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0189750.1 Non Characterized Hit- tr|I1K392|I1K392_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,77.05,3e-19,seg,NULL;
SUBFAMILY NOT NAMED,NULL; DNA2/NAM7 HELICASE FAMILY,NULL,CUFF.46616.1
         (61 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr0189s0030.1 | P-loop nucleoside triphosphate hydrolase supe...    72   9e-14
Medtr3g436400.1 | P-loop nucleoside triphosphate hydrolase super...    51   3e-07

>Medtr0189s0030.1 | P-loop nucleoside triphosphate hydrolase
           superfamily protein | HC | scaffold0189:14094-24465 |
           20130731
          Length = 2395

 Score = 72.4 bits (176), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 38/61 (62%), Positives = 42/61 (68%)

Query: 1   MNYRTLVCAPTNVAIKEVASRVLSIVRSSVDGNSXXXXXXXXXXXXXXNHERLKVGEDIE 60
           MN RTLVCAPTN+AIKEVASRVLS+VR S D NS              NHE+LKVG +IE
Sbjct: 264 MNCRTLVCAPTNIAIKEVASRVLSMVRESFDRNSDALFCNLGDMLLFGNHEQLKVGAEIE 323

Query: 61  E 61
           E
Sbjct: 324 E 324


>Medtr3g436400.1 | P-loop nucleoside triphosphate hydrolase
           superfamily protein | HC | chr3:12235889-12229184 |
           20130731
          Length = 1644

 Score = 50.8 bits (120), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/62 (51%), Positives = 36/62 (58%), Gaps = 9/62 (14%)

Query: 1   MNYRTLVCAPTNVAIKEVASRVLSIVRSSVDGNSXXXXXXXXXXXXXXNHERLKVG-EDI 59
           M YR LVCAPTNVAIKEVASRVL I R S                   N++RL VG E+I
Sbjct: 308 MKYRILVCAPTNVAIKEVASRVLHIARES--------QCSAGDMLLFGNNDRLDVGSEEI 359

Query: 60  EE 61
           E+
Sbjct: 360 ED 361