Miyakogusa Predicted Gene

Lj4g3v0166220.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0166220.1 Non Characterized Hit- tr|I3S1L0|I3S1L0_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,90,0.000004,
,CUFF.46668.1
         (92 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g073700.1 | ribosomal protein L37 | HC | chr4:27972645-279...    52   1e-07

>Medtr4g073700.1 | ribosomal protein L37 | HC |
          chr4:27972645-27969006 | 20130731
          Length = 131

 Score = 52.0 bits (123), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/39 (66%), Positives = 29/39 (74%)

Query: 1  MAMYYVRSVRHILTTKEAFGVASKRAFATGKAKKGSKGV 39
          M M + RSVR IL+TK A  V  +R FATGKAKKGSKGV
Sbjct: 1  MLMNHARSVRRILSTKVAVSVVCQRTFATGKAKKGSKGV 39