Miyakogusa Predicted Gene

Lj4g3v0165050.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0165050.1 tr|D7KBM7|D7KBM7_ARALL Predicted protein
OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_679191
PE,35.67,0.0000000000002,seg,NULL,
NODE_5542_length_945_cov_50.869843.path1.1
         (229 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g064750.1 | hypothetical protein | HC | chr3:29187042-2919...    55   6e-08

>Medtr3g064750.1 | hypothetical protein | HC |
           chr3:29187042-29191148 | 20130731
          Length = 274

 Score = 55.1 bits (131), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 35/50 (70%), Gaps = 4/50 (8%)

Query: 183 EIQQNKRVITRS----VVYPFALVKPGGREGDVTLNDINERILMPPTRPV 228
           E+++N   I+R     + YPF LVKPGG EG+ T+ DIN +++M P++P+
Sbjct: 177 ELKENGASISRGQWKKIAYPFELVKPGGVEGETTIKDINHQMMMSPSKPI 226