Miyakogusa Predicted Gene

Lj4g3v0153870.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0153870.1 Non Characterized Hit- tr|B9SAC3|B9SAC3_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,34.88,0.000000002,coiled-coil,NULL; seg,NULL,CUFF.46572.1
         (129 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g023010.1 | expression of the protein is downregulated in ...   112   1e-25
Medtr4g132000.1 | DUF4228 domain protein, putative | HC | chr4:5...    97   4e-21
Medtr4g132010.1 | hypothetical protein | HC | chr4:55131069-5513...    97   4e-21

>Medtr2g023010.1 | expression of the protein is downregulated in the
           presence of paraquat, an inducer of photoxidative stress
           protein, putative | HC | chr2:8022964-8021820 | 20130731
          Length = 127

 Score =  112 bits (280), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 66/130 (50%), Positives = 86/130 (66%), Gaps = 7/130 (5%)

Query: 1   MGNCIVPASSMEWGGDDWGSLRSDEHTRXXXXXNKVFDEGHALSLRNVPKEKLLGALKSS 60
           MGNC   +SSMEW G+DWGSL S+  +R     +KVFDE H LSL N+ KEKLLGAL++S
Sbjct: 1   MGNCCT-SSSMEWAGEDWGSLTSNHKSRMNS--SKVFDEVHGLSLGNIEKEKLLGALRAS 57

Query: 61  CDANGKVKIKMSKKEVAELLVVIEKQQQNKKAGGASSAEQVLLRLIXXXXXXXXXXXP-- 118
            DANGKVKIK+SKKE+A LL   E ++Q   +   +SAE VL+ L+              
Sbjct: 58  SDANGKVKIKISKKELAVLLG--ESEKQGVGSTKHASAEHVLVGLLNARDHVNHDVHHRL 115

Query: 119 WRPVLETVPE 128
           W+PVL+++PE
Sbjct: 116 WKPVLQSIPE 125


>Medtr4g132000.1 | DUF4228 domain protein, putative | HC |
           chr4:55126550-55125258 | 20130731
          Length = 138

 Score = 97.1 bits (240), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 63/139 (45%), Positives = 79/139 (56%), Gaps = 14/139 (10%)

Query: 1   MGNCIVPASSMEWGGDDWGSLRSDEHTRXXXXXNKVFDEGHALSLRNVPKEK-LLGALKS 59
           MGNC   A SME+GG+DWGSL+S +        +KVFDE H   L +  KE  LL  L++
Sbjct: 1   MGNCCRAAPSMEFGGEDWGSLKSSKPKACRSSSSKVFDEAH---LDHPQKENDLLERLRA 57

Query: 60  SCDANGKVKIKMSKKEVAELLVVI---------EKQQQNKKAGGASSAEQVLLRLIXXXX 110
           S DA+GKV +K+SK E+AELL  I         +KQ + K      SAEQVL RLI    
Sbjct: 58  SGDASGKVTLKISKSELAELLGAIQNSSNNQEPQKQMKKKTTNELGSAEQVLYRLIKARD 117

Query: 111 XX-XXXXXPWRPVLETVPE 128
                    W+PVLET+PE
Sbjct: 118 HEIANKHDHWKPVLETIPE 136


>Medtr4g132010.1 | hypothetical protein | HC |
           chr4:55131069-55130167 | 20130731
          Length = 135

 Score = 96.7 bits (239), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 62/142 (43%), Positives = 81/142 (57%), Gaps = 21/142 (14%)

Query: 1   MGNCIVPASSMEWGGDDWGSLRSDEHTRXXX---XXNKVFDEGHALSLRNVPKEK-LLGA 56
           MGNC  P+SSMEW G+DW SLRS   +R        +KVFDE    SL +  KE  +LG 
Sbjct: 1   MGNCCKPSSSMEWVGEDWESLRSKPESRKTKPYPSSSKVFDEA---SLDHHQKENDVLGK 57

Query: 57  LKSSCDANGKVKIKMSKKEVAELLVVIEKQQQNKKAGGA----------SSAEQVLLRLI 106
           L++SCDA+GKV +K+SK E+AELL  I++   N                +SAE+VL RL+
Sbjct: 58  LRASCDASGKVTLKISKSELAELLGAIQQNNINSSNQQPKQQMKKKKELASAEEVLFRLM 117

Query: 107 XXXXXXXXXXXPWRPVLETVPE 128
                       W+PVLET+PE
Sbjct: 118 KAKDHEHH----WKPVLETIPE 135