Miyakogusa Predicted Gene

Lj4g3v0153800.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0153800.1 Non Characterized Hit- tr|D8RWL3|D8RWL3_SELML
Putative uncharacterized protein OS=Selaginella
moelle,35.62,2e-18,Senescence_reg,Senescence regulator;
seg,NULL,CUFF.46564.1
         (199 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g132020.1 | senescence regulator | HC | chr4:55142282-5514...   213   6e-56
Medtr2g023070.2 | senescence regulator | HC | chr2:8067704-80698...   190   9e-49
Medtr2g023070.1 | senescence regulator | HC | chr2:8067704-80691...   190   9e-49
Medtr2g094410.1 | senescence regulator | HC | chr2:40255783-4025...    86   2e-17
Medtr4g059320.1 | senescence regulator | HC | chr4:21779245-2177...    79   2e-15
Medtr2g023390.1 | senescence regulator | HC | chr2:8253146-82536...    75   3e-14
Medtr7g101250.1 | senescence regulator | HC | chr7:40859944-4086...    75   5e-14
Medtr2g086660.1 | senescence regulator | HC | chr2:36431537-3643...    67   1e-11
Medtr3g052330.1 | senescence regulator | HC | chr3:20712143-2071...    65   3e-11
Medtr3g052330.2 | senescence regulator | HC | chr3:20712177-2071...    65   3e-11
Medtr2g086660.2 | senescence regulator | HC | chr2:36431537-3643...    65   5e-11
Medtr2g086660.3 | senescence regulator | HC | chr2:36431537-3643...    65   5e-11
Medtr7g105130.1 | senescence regulator | HC | chr7:42622940-4262...    55   5e-08
Medtr2g018175.1 | senescence regulator | HC | chr2:5719063-57201...    50   2e-06

>Medtr4g132020.1 | senescence regulator | HC |
           chr4:55142282-55143457 | 20130731
          Length = 176

 Score =  213 bits (543), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 125/201 (62%), Positives = 138/201 (68%), Gaps = 27/201 (13%)

Query: 1   MAKGRRFSSNRTERLLGTAYTAQGSTV-SVTDPSEFREEDVWSTAEDHDMNV-YHDGDWE 58
           MAKGR+F++NR ERLLGT Y    +T   VTD   FREEDVWS  ED D NV +  GDW+
Sbjct: 1   MAKGRKFTTNRNERLLGTNYIQSSNTTHEVTD---FREEDVWSIVEDRDHNVNFTPGDWD 57

Query: 59  SRATHRARNRELEEQHRQLGGLSMAFEDPAGRMMTTATSSSRIVXXXXXXXXXXXXXVAT 118
           SRA  R  N          GGLS+ FE+P   +   AT+SSR V             VAT
Sbjct: 58  SRAPSRRFNH---------GGLSLPFENPVSNV---ATTSSRNVHHQYRN-------VAT 98

Query: 119 SAPVNVPDWSKILRVNSVESLHDGFDDDGDNEPEMVPPHEYLARSRKMAANSVFEGVGRT 178
           SAPVNVPDWSKILRV SVESLHD    D DNE EMVPPHEYLAR RKMAANSVFEGVGRT
Sbjct: 99  SAPVNVPDWSKILRVESVESLHDM---DDDNESEMVPPHEYLARGRKMAANSVFEGVGRT 155

Query: 179 LKGRDMSRVRDAVWSQTGFNG 199
           LKGRD+ RVRDAVW+QTGF+G
Sbjct: 156 LKGRDLRRVRDAVWNQTGFDG 176


>Medtr2g023070.2 | senescence regulator | HC | chr2:8067704-8069838
           | 20130731
          Length = 218

 Score =  190 bits (482), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 116/222 (52%), Positives = 148/222 (66%), Gaps = 27/222 (12%)

Query: 1   MAKGRRFSSNRTERLLGT-AYTAQGSTVSVTDPSEFREEDVWST-AEDHDMNVYHDGDWE 58
           MAKGR+ +++R+ER LGT  Y+   S+ +  DPSE REED+WST     ++++    +WE
Sbjct: 1   MAKGRKLTTSRSERFLGTYGYSHNQSSAAAADPSELREEDIWSTDVGSGEVDLNFSDEWE 60

Query: 59  SR-------------ATHRARNR--ELEEQHRQLGGLSMAFEDPAGRMMTTATSSSRIVX 103
           S              +++R R+R  +  ++HRQLGGLS+AFEDP   + ++  +++RIV 
Sbjct: 61  SPNAETVEIIGGGSGSSYRNRHRITQNSDEHRQLGGLSLAFEDP---VNSSTVATARIVH 117

Query: 104 X------XXXXXXXXXXXVATSAPVNVPDWSKILRVNSVESLHDGFDDDGDNEPEMVPPH 157
                             +ATS PVNVPDWSKILRV+SVESLHD   DD D   EMVPPH
Sbjct: 118 QFRAHDGVASSPSARGRHMATSLPVNVPDWSKILRVDSVESLHDDSFDDDDES-EMVPPH 176

Query: 158 EYLARSRKMAANSVFEGVGRTLKGRDMSRVRDAVWSQTGFNG 199
           EYLARSRK AA SVFEGVGRTLKGRD+SRVRDAVWSQTGF+G
Sbjct: 177 EYLARSRKNAAKSVFEGVGRTLKGRDLSRVRDAVWSQTGFDG 218


>Medtr2g023070.1 | senescence regulator | HC | chr2:8067704-8069103
           | 20130731
          Length = 218

 Score =  190 bits (482), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 116/222 (52%), Positives = 148/222 (66%), Gaps = 27/222 (12%)

Query: 1   MAKGRRFSSNRTERLLGT-AYTAQGSTVSVTDPSEFREEDVWST-AEDHDMNVYHDGDWE 58
           MAKGR+ +++R+ER LGT  Y+   S+ +  DPSE REED+WST     ++++    +WE
Sbjct: 1   MAKGRKLTTSRSERFLGTYGYSHNQSSAAAADPSELREEDIWSTDVGSGEVDLNFSDEWE 60

Query: 59  SR-------------ATHRARNR--ELEEQHRQLGGLSMAFEDPAGRMMTTATSSSRIVX 103
           S              +++R R+R  +  ++HRQLGGLS+AFEDP   + ++  +++RIV 
Sbjct: 61  SPNAETVEIIGGGSGSSYRNRHRITQNSDEHRQLGGLSLAFEDP---VNSSTVATARIVH 117

Query: 104 X------XXXXXXXXXXXVATSAPVNVPDWSKILRVNSVESLHDGFDDDGDNEPEMVPPH 157
                             +ATS PVNVPDWSKILRV+SVESLHD   DD D   EMVPPH
Sbjct: 118 QFRAHDGVASSPSARGRHMATSLPVNVPDWSKILRVDSVESLHDDSFDDDDES-EMVPPH 176

Query: 158 EYLARSRKMAANSVFEGVGRTLKGRDMSRVRDAVWSQTGFNG 199
           EYLARSRK AA SVFEGVGRTLKGRD+SRVRDAVWSQTGF+G
Sbjct: 177 EYLARSRKNAAKSVFEGVGRTLKGRDLSRVRDAVWSQTGFDG 218


>Medtr2g094410.1 | senescence regulator | HC |
           chr2:40255783-40256708 | 20130731
          Length = 156

 Score = 85.9 bits (211), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 46/84 (54%), Positives = 61/84 (72%), Gaps = 4/84 (4%)

Query: 117 ATSAPVNVPDWSKILRVNSVESLHDGFDDDGDNEPEM---VPPHEYLARSRKMAANSVFE 173
            +S PVNVPDWSKIL  +   +    +DD  + +      +PPHE+LAR+R MA+ SV E
Sbjct: 72  VSSLPVNVPDWSKILGEDYRHNRRRNYDDVDEEDEGDDEKIPPHEFLARTR-MASFSVHE 130

Query: 174 GVGRTLKGRDMSRVRDAVWSQTGF 197
           GVGRTLKGRD+SRVR+A+W++TGF
Sbjct: 131 GVGRTLKGRDLSRVRNAIWAKTGF 154


>Medtr4g059320.1 | senescence regulator | HC |
           chr4:21779245-21778390 | 20130731
          Length = 158

 Score = 79.0 bits (193), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 41/81 (50%), Positives = 62/81 (76%), Gaps = 3/81 (3%)

Query: 119 SAPVNVPDWSKIL--RVNSVESLHDGFDDDGDNEPEMVPPHEYLARSRKMAANSVFEGVG 176
           S PV +PDWSKIL     +  +  +  +++ +++ E +PPHE+LAR+R +A+ SV EGVG
Sbjct: 78  SMPVKIPDWSKILGDEYKNNYTKRNYVEEEDEDDDEWLPPHEFLARTR-VASFSVHEGVG 136

Query: 177 RTLKGRDMSRVRDAVWSQTGF 197
           RTLKGRD+SR+R+A+W++TGF
Sbjct: 137 RTLKGRDLSRLRNAIWAKTGF 157


>Medtr2g023390.1 | senescence regulator | HC | chr2:8253146-8253635
           | 20130731
          Length = 156

 Score = 75.5 bits (184), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 45/85 (52%), Positives = 65/85 (76%), Gaps = 6/85 (7%)

Query: 117 ATSAPVNVPDWSKILRVNSVES-LHDGFDDDGDNEPEMVPPHEYLARS---RKMAANSVF 172
            +SAP+N+PDWSK+   NS    LHD  D+DGD + +MVPPHE++AR     ++++ SV 
Sbjct: 72  GSSAPMNIPDWSKVYGKNSKNGGLHD--DEDGDEDGDMVPPHEWIARKLARSQISSFSVC 129

Query: 173 EGVGRTLKGRDMSRVRDAVWSQTGF 197
           EG+GRTLKGRD+S+VR+A+ ++TGF
Sbjct: 130 EGMGRTLKGRDLSKVRNAILTKTGF 154


>Medtr7g101250.1 | senescence regulator | HC |
           chr7:40859944-40861013 | 20130731
          Length = 160

 Score = 74.7 bits (182), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 41/83 (49%), Positives = 56/83 (67%), Gaps = 3/83 (3%)

Query: 117 ATSAPVNVPDWSKILRVNSVESLHDGFDDDGDNEPEMV--PPHEYLARSRKMAANSVFEG 174
           ++S P+N+PDWSKIL+    +      D+D  +   +V  PPHEYLAR+R  A+ SV EG
Sbjct: 77  SSSLPMNIPDWSKILKEEYKKKKESSDDEDEGDYDGVVQLPPHEYLARTRG-ASLSVHEG 135

Query: 175 VGRTLKGRDMSRVRDAVWSQTGF 197
            GRTLKGRD+  VR+A+W + GF
Sbjct: 136 KGRTLKGRDLRSVRNAIWKKVGF 158


>Medtr2g086660.1 | senescence regulator | HC |
           chr2:36431537-36432609 | 20130731
          Length = 255

 Score = 67.0 bits (162), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/86 (50%), Positives = 52/86 (60%), Gaps = 9/86 (10%)

Query: 119 SAPVNVPDWSKILRVNSVESLHDGFDDDGDNEPE----MVPPHEYLARS---RKMAANSV 171
           SAP+NVP  S  +  N      +  D    NE E     +PPHEYL+R      M + S+
Sbjct: 170 SAPMNVPMMSSAM-ANRARRYEEE-DAHALNEEEEFRSTMPPHEYLSRQVDFSPMHSCSL 227

Query: 172 FEGVGRTLKGRDMSRVRDAVWSQTGF 197
           FEGVGRTLKGRDM +VR+AV SQTGF
Sbjct: 228 FEGVGRTLKGRDMRQVRNAVLSQTGF 253


>Medtr3g052330.1 | senescence regulator | HC |
           chr3:20712143-20713744 | 20130731
          Length = 200

 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 42/110 (38%), Positives = 60/110 (54%), Gaps = 31/110 (28%)

Query: 119 SAPVNVPDWSKILRVNS---------VESLHDGFDDDGDNE------------------- 150
           SAPVN+PDWSKI   N+         V   ++    +GD+E                   
Sbjct: 87  SAPVNIPDWSKIYGNNNNKQNKSTKKVSRYNEYGYYEGDDEVVYHGGEDGEEDDDDDDEY 146

Query: 151 PEMVPPHEYLARS---RKMAANSVFEGVGRTLKGRDMSRVRDAVWSQTGF 197
              VPPHE ++R     ++++ SVFEGVGRTLKGRD+S++R++V  +TGF
Sbjct: 147 STRVPPHEIISRRLARSQISSFSVFEGVGRTLKGRDLSKMRNSVLIKTGF 196


>Medtr3g052330.2 | senescence regulator | HC |
           chr3:20712177-20713718 | 20130731
          Length = 200

 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 42/110 (38%), Positives = 60/110 (54%), Gaps = 31/110 (28%)

Query: 119 SAPVNVPDWSKILRVNS---------VESLHDGFDDDGDNE------------------- 150
           SAPVN+PDWSKI   N+         V   ++    +GD+E                   
Sbjct: 87  SAPVNIPDWSKIYGNNNNKQNKSTKKVSRYNEYGYYEGDDEVVYHGGEDGEEDDDDDDEY 146

Query: 151 PEMVPPHEYLARS---RKMAANSVFEGVGRTLKGRDMSRVRDAVWSQTGF 197
              VPPHE ++R     ++++ SVFEGVGRTLKGRD+S++R++V  +TGF
Sbjct: 147 STRVPPHEIISRRLARSQISSFSVFEGVGRTLKGRDLSKMRNSVLIKTGF 196


>Medtr2g086660.2 | senescence regulator | HC |
           chr2:36431537-36434931 | 20130731
          Length = 277

 Score = 65.1 bits (157), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 42/85 (49%), Positives = 51/85 (60%), Gaps = 9/85 (10%)

Query: 119 SAPVNVPDWSKILRVNSVESLHDGFDDDGDNEPE----MVPPHEYLARS---RKMAANSV 171
           SAP+NVP  S  +  N      +  D    NE E     +PPHEYL+R      M + S+
Sbjct: 170 SAPMNVPMMSSAM-ANRARRYEEE-DAHALNEEEEFRSTMPPHEYLSRQVDFSPMHSCSL 227

Query: 172 FEGVGRTLKGRDMSRVRDAVWSQTG 196
           FEGVGRTLKGRDM +VR+AV SQTG
Sbjct: 228 FEGVGRTLKGRDMRQVRNAVLSQTG 252


>Medtr2g086660.3 | senescence regulator | HC |
           chr2:36431537-36434615 | 20130731
          Length = 277

 Score = 65.1 bits (157), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 42/85 (49%), Positives = 51/85 (60%), Gaps = 9/85 (10%)

Query: 119 SAPVNVPDWSKILRVNSVESLHDGFDDDGDNEPE----MVPPHEYLARS---RKMAANSV 171
           SAP+NVP  S  +  N      +  D    NE E     +PPHEYL+R      M + S+
Sbjct: 170 SAPMNVPMMSSAM-ANRARRYEEE-DAHALNEEEEFRSTMPPHEYLSRQVDFSPMHSCSL 227

Query: 172 FEGVGRTLKGRDMSRVRDAVWSQTG 196
           FEGVGRTLKGRDM +VR+AV SQTG
Sbjct: 228 FEGVGRTLKGRDMRQVRNAVLSQTG 252


>Medtr7g105130.1 | senescence regulator | HC |
           chr7:42622940-42623975 | 20130731
          Length = 217

 Score = 54.7 bits (130), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 3/46 (6%)

Query: 155 PPHEYLARSRKMAAN---SVFEGVGRTLKGRDMSRVRDAVWSQTGF 197
           PPHE +AR   ++     SV EGVGRTLKGRD+ +VR+AV  QTGF
Sbjct: 170 PPHEIVARGSGVSPRTTFSVLEGVGRTLKGRDLRQVRNAVLRQTGF 215


>Medtr2g018175.1 | senescence regulator | HC | chr2:5719063-5720112
           | 20130731
          Length = 127

 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/48 (52%), Positives = 32/48 (66%), Gaps = 5/48 (10%)

Query: 153 MVPPHEYLARSRKMAANSVFE---GVGRTLKGRDMSRVRDAVWSQTGF 197
           MVPPH  L  +R++A    F    G GRTLKGRD+SRVR+++   TGF
Sbjct: 79  MVPPH--LIMARRLAGKMTFSMCSGHGRTLKGRDLSRVRNSILRMTGF 124