Miyakogusa Predicted Gene

Lj4g3v0151550.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0151550.1 Non Characterized Hit- tr|K4B2P2|K4B2P2_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,58.93,2e-16,seg,NULL,CUFF.46534.1
         (476 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g132160.1 | transmembrane protein, putative | HC | chr4:55...   246   3e-65

>Medtr4g132160.1 | transmembrane protein, putative | HC |
           chr4:55210292-55213831 | 20130731
          Length = 861

 Score =  246 bits (628), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 208/481 (43%), Positives = 255/481 (53%), Gaps = 108/481 (22%)

Query: 20  SPSLHIWFTKSLTSISELILNVRGANKLVQLQYYNLTALDDFISVHQYPIFAPGEN---- 75
           S +LH W+TKSL+SISELI +VRG   + QLQY+NLT L D+ +V+Q PIF  GEN    
Sbjct: 428 SRNLHTWYTKSLSSISELISDVRGVRNMSQLQYFNLTVLHDYSAVNQSPIFGRGENKIGY 487

Query: 76  ------ERDAASEIGASEYYVEDISDEHYEVYEEQLQQDMEISTGAENAFDAVESEEALK 129
                 E   ASEI   EY+  DIS EHYEVYEEQLQ DM ++TG E A DA ESE    
Sbjct: 488 TCPPVQETHVASEISMDEYF-GDISAEHYEVYEEQLQHDMGMNTGFETALDAQESE---- 542

Query: 130 GQPASMIESXXXXXXXXXXILHEMLLAGEVHASFFNVEDASDEEVLKGKSTSMTESEQAL 189
                                                      EV KG+  +  ESEQ  
Sbjct: 543 -------------------------------------------EVHKGQPATYIESEQQ- 558

Query: 190 QVAEAEILHEMLLAGEVDASFFNVEDASGASD-YEGQSTTMVESEQAEAGVEFIV----- 243
             AE E L +  L  EVDA+F  V DA  + +   GQST +VE +Q    VE ++     
Sbjct: 559 --AEHEHL-DAKLEEEVDANF-EVGDALESEEVLTGQSTALVEPKQDLQLVESVISEGNQ 614

Query: 244 -------ENHPSLNSEAAEIPVEVYGAGNIDTKQGHETDANL----GDVDLQQWQDLDSE 292
                  EN PS NSE   I  EV G  N+DTK   E D  L     D DL+     DSE
Sbjct: 615 TPKDDDNENMPSSNSE---IQNEVCGESNVDTKLEQENDGKLIGKESDADLKHSPVSDSE 671

Query: 293 VAEIQTEPTSI-----DDAAIE----------IPQGMVLYMLLCGGTVLIAGAAFNWSRK 337
           VAEI T+  ++      DAAI            P  MVLY+LLC GTV IAGA FNWSRK
Sbjct: 672 VAEIHTDGQAVGISAGTDAAIRGNEQLLEATHSPHNMVLYLLLCAGTVFIAGATFNWSRK 731

Query: 338 GKSRSQKVTSCSKEQPMLVKEAHTNKQISPEKPSLRNGPIEMDMLNSEPCPSEMSSFQKS 397
            KSRS+K+TSC  E+P +  E   +K+ISP+KPS+RN P+EMD++  E CPSEMS     
Sbjct: 732 VKSRSKKITSCV-EKPKIESE---DKKISPDKPSMRNVPVEMDVV-GESCPSEMS--SFE 784

Query: 398 SSYSTRVDKKLNEAHSVEKQPKKSVNRREXXXXXXXXXXXXXXXXLTVYEKIPSKGYGDE 457
            S S+RV+   NEA SVEK+ +++ +RRE                LTVYEKIP KG G+E
Sbjct: 785 KSSSSRVNHS-NEAISVEKK-RRNYHRRESLASSDYSMGSPSYGSLTVYEKIP-KGRGEE 841

Query: 458 E 458
           E
Sbjct: 842 E 842