Miyakogusa Predicted Gene

Lj4g3v0151520.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0151520.1 Non Characterized Hit- tr|G7JJ82|G7JJ82_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,68.06,9e-17,seg,NULL,CUFF.46530.1
         (72 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g132230.1 | hypothetical protein | HC | chr4:55249731-5524...    67   4e-12
Medtr2g023440.1 | ankyrin repeat protein, putative | LC | chr2:8...    64   3e-11

>Medtr4g132230.1 | hypothetical protein | HC |
          chr4:55249731-55249000 | 20130731
          Length = 117

 Score = 66.6 bits (161), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 38/56 (67%), Positives = 42/56 (75%), Gaps = 5/56 (8%)

Query: 1  MATEAPSWADQWGAGGIGALEDDNSG-SQKDIG-KTKNSGAKNGFSKAKATASNCV 54
          MATEAPSWADQWGAGG GA+ED+N+  SQ D   K+KN  A     KAKATASNCV
Sbjct: 40 MATEAPSWADQWGAGGFGAMEDENNNRSQNDTSKKSKNPSA---LCKAKATASNCV 92


>Medtr2g023440.1 | ankyrin repeat protein, putative | LC |
          chr2:8282667-8282422 | 20130731
          Length = 81

 Score = 63.9 bits (154), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 34/53 (64%), Positives = 42/53 (79%), Gaps = 2/53 (3%)

Query: 1  MATEAPSWADQWGAGGIGAL--EDDNSGSQKDIGKTKNSGAKNGFSKAKATAS 51
          MA E+ SWADQWGAGGIGA+  E+ ++ SQKD G +KNS AK GF+KAKA A+
Sbjct: 1  MANESRSWADQWGAGGIGAMKYEEIDTRSQKDTGNSKNSSAKAGFTKAKAIAT 53