Miyakogusa Predicted Gene

Lj4g3v0151510.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0151510.1 tr|D7KMI1|D7KMI1_ARALL Ankyrin repeat family
protein OS=Arabidopsis lyrata subsp. lyrata
GN=ARALYDRA,41.8,1e-16,seg,NULL; GPCR_chapero_1,Ankyrin repeat
domain-containing protein 13,CUFF.46529.1
         (132 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g023450.1 | ankyrin repeat 13C-like protein | HC | chr2:82...    90   6e-19

>Medtr2g023450.1 | ankyrin repeat 13C-like protein | HC |
           chr2:8288370-8285447 | 20130731
          Length = 582

 Score = 89.7 bits (221), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 48/90 (53%), Positives = 55/90 (61%), Gaps = 6/90 (6%)

Query: 24  FTKFVELQPVEQFYTPFSSPRHLSSETGRVDEEHKPERHRXXXXXXXVAYKWLRRNNSMS 83
           FTKFVELQPVE+FYTPFSSPRHL + T   DE+  PE              WLRRNNS S
Sbjct: 479 FTKFVELQPVEKFYTPFSSPRHLIA-TDNDDEQPNPENR-----YSSFTSSWLRRNNSQS 532

Query: 84  RAGNKQQQPQCSSMTLDCDTFAIPAGYTWT 113
            +   +QQ + SS  LD D F IP GY W+
Sbjct: 533 GSSRSKQQQKSSSGPLDLDPFVIPEGYIWS 562