Miyakogusa Predicted Gene

Lj4g3v0134610.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0134610.1 Non Characterized Hit- tr|I1KNG6|I1KNG6_SOYBN
Uncharacterized protein OS=Glycine max PE=3
SV=1,93.55,0,ValRS/IleRS/LeuRS editing
domain,Valyl/Leucyl/Isoleucyl-tRNA synthetase, class Ia, editing
domain; N,CUFF.46506.1
         (411 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g132500.2 | leucyl-tRNA synthetase | HC | chr4:55397369-55...   758   0.0  
Medtr4g132500.1 | leucyl-tRNA synthetase | HC | chr4:55397313-55...   758   0.0  
Medtr1g101620.2 | valyl-tRNA synthetase/valine-tRNA ligase | HC ...    53   5e-07
Medtr1g101620.1 | valyl-tRNA synthetase/valine-tRNA ligase | HC ...    53   5e-07

>Medtr4g132500.2 | leucyl-tRNA synthetase | HC |
           chr4:55397369-55386514 | 20130731
          Length = 970

 Score =  758 bits (1957), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/403 (91%), Positives = 386/403 (95%)

Query: 1   MRQWMLKITAYADRLFEDLDDLDWPESVKEMQRNWIGRSEGAEMEFCILDNDGKERDINI 60
           MRQWMLKITAYADRL EDLDDLDWPESVKEMQRNWIGRSEGAE+EFCILD DGKERD  I
Sbjct: 268 MRQWMLKITAYADRLLEDLDDLDWPESVKEMQRNWIGRSEGAELEFCILDGDGKERDTQI 327

Query: 61  IVYTTRPDTIFGATYLVVAPEHPLLLSLVSVAQSKQVEDYVDLASRKSDLERTELQKEKT 120
            VYTTRPDTIFGATYLVVAPEH L+ SL+S AQSK VEDY+DLAS+KSDLERTELQKEKT
Sbjct: 328 TVYTTRPDTIFGATYLVVAPEHSLISSLISTAQSKHVEDYIDLASKKSDLERTELQKEKT 387

Query: 121 GVFTGCYAKNPANGEAIPIWVADYVLGSYGTGAIMAVPAHDSRDYEFALKYDVPVRWVVL 180
           GVFTGCYAKNPANGEAIPIWVADYVLGSYGTGAIMAVPAHDSRDYEFALKYD+P+RWVV+
Sbjct: 388 GVFTGCYAKNPANGEAIPIWVADYVLGSYGTGAIMAVPAHDSRDYEFALKYDIPIRWVVM 447

Query: 181 PDGKSVNESGKAFPGEGIIANSSNKVVGLDINGLSSKEAALKVIKWAEKSGNGKRKVNYK 240
           PD KS+ ESGKAFPGEGIIANSSN ++GLDINGL SKEAAL+VI WAEKSGNGKRKVNYK
Sbjct: 448 PDDKSIAESGKAFPGEGIIANSSNTLMGLDINGLRSKEAALQVIDWAEKSGNGKRKVNYK 507

Query: 241 LRDWLFARQRYWGEPIPVIFLDDSGETIPLSETELPIILPELDDFSPSGTGEPPLSKAVS 300
           LRDWLFARQRYWGEPIPVIFLDDSGET+PL ETELP+ILPELDDFSP+GTGEPPL+KAVS
Sbjct: 508 LRDWLFARQRYWGEPIPVIFLDDSGETVPLDETELPLILPELDDFSPTGTGEPPLAKAVS 567

Query: 301 WVKTTDSLSGRPATRETNTMPQWAGSCWYYLRFMDPNNSKELVDKTKERYWGPVDVYVGG 360
           WVKTTD LSGRPATRETNTMPQWAGSCWYYLRFMDPNNSKELVDK KERYWGPVDVYVGG
Sbjct: 568 WVKTTDRLSGRPATRETNTMPQWAGSCWYYLRFMDPNNSKELVDKEKERYWGPVDVYVGG 627

Query: 361 AEHAVLHLLYARFWHKVLFDIGVVSTKEPFQCVINQGIILGEV 403
           AEHAVLHLLYARFWHKVLFDIGVVSTKEPFQCVINQGIILGEV
Sbjct: 628 AEHAVLHLLYARFWHKVLFDIGVVSTKEPFQCVINQGIILGEV 670


>Medtr4g132500.1 | leucyl-tRNA synthetase | HC |
           chr4:55397313-55386514 | 20130731
          Length = 970

 Score =  758 bits (1957), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/403 (91%), Positives = 386/403 (95%)

Query: 1   MRQWMLKITAYADRLFEDLDDLDWPESVKEMQRNWIGRSEGAEMEFCILDNDGKERDINI 60
           MRQWMLKITAYADRL EDLDDLDWPESVKEMQRNWIGRSEGAE+EFCILD DGKERD  I
Sbjct: 268 MRQWMLKITAYADRLLEDLDDLDWPESVKEMQRNWIGRSEGAELEFCILDGDGKERDTQI 327

Query: 61  IVYTTRPDTIFGATYLVVAPEHPLLLSLVSVAQSKQVEDYVDLASRKSDLERTELQKEKT 120
            VYTTRPDTIFGATYLVVAPEH L+ SL+S AQSK VEDY+DLAS+KSDLERTELQKEKT
Sbjct: 328 TVYTTRPDTIFGATYLVVAPEHSLISSLISTAQSKHVEDYIDLASKKSDLERTELQKEKT 387

Query: 121 GVFTGCYAKNPANGEAIPIWVADYVLGSYGTGAIMAVPAHDSRDYEFALKYDVPVRWVVL 180
           GVFTGCYAKNPANGEAIPIWVADYVLGSYGTGAIMAVPAHDSRDYEFALKYD+P+RWVV+
Sbjct: 388 GVFTGCYAKNPANGEAIPIWVADYVLGSYGTGAIMAVPAHDSRDYEFALKYDIPIRWVVM 447

Query: 181 PDGKSVNESGKAFPGEGIIANSSNKVVGLDINGLSSKEAALKVIKWAEKSGNGKRKVNYK 240
           PD KS+ ESGKAFPGEGIIANSSN ++GLDINGL SKEAAL+VI WAEKSGNGKRKVNYK
Sbjct: 448 PDDKSIAESGKAFPGEGIIANSSNTLMGLDINGLRSKEAALQVIDWAEKSGNGKRKVNYK 507

Query: 241 LRDWLFARQRYWGEPIPVIFLDDSGETIPLSETELPIILPELDDFSPSGTGEPPLSKAVS 300
           LRDWLFARQRYWGEPIPVIFLDDSGET+PL ETELP+ILPELDDFSP+GTGEPPL+KAVS
Sbjct: 508 LRDWLFARQRYWGEPIPVIFLDDSGETVPLDETELPLILPELDDFSPTGTGEPPLAKAVS 567

Query: 301 WVKTTDSLSGRPATRETNTMPQWAGSCWYYLRFMDPNNSKELVDKTKERYWGPVDVYVGG 360
           WVKTTD LSGRPATRETNTMPQWAGSCWYYLRFMDPNNSKELVDK KERYWGPVDVYVGG
Sbjct: 568 WVKTTDRLSGRPATRETNTMPQWAGSCWYYLRFMDPNNSKELVDKEKERYWGPVDVYVGG 627

Query: 361 AEHAVLHLLYARFWHKVLFDIGVVSTKEPFQCVINQGIILGEV 403
           AEHAVLHLLYARFWHKVLFDIGVVSTKEPFQCVINQGIILGEV
Sbjct: 628 AEHAVLHLLYARFWHKVLFDIGVVSTKEPFQCVINQGIILGEV 670


>Medtr1g101620.2 | valyl-tRNA synthetase/valine-tRNA ligase | HC |
           chr1:45900200-45890846 | 20130731
          Length = 1053

 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 60/249 (24%), Positives = 91/249 (36%), Gaps = 85/249 (34%)

Query: 60  IIVYTTRPDTIFGATYLVVAPEHPLLLSLVSVAQSKQVEDYVDLASRKSDLERTELQKEK 119
           I+V TTR +T+ G T + V P                                     ++
Sbjct: 324 IVVATTRIETMLGDTAIAVHP-----------------------------------TDDR 348

Query: 120 TGVFTGCYAKNPANGEAIPIWVADYVL--GSYGTGAIMAVPAHDSRDYEFALKYDVPVRW 177
              F G YA +P NG  IPI + D +L    +GTGA+   PAHD  D+E   ++ +    
Sbjct: 349 YSQFHGKYAVHPFNGRKIPI-ICDAILVDPKFGTGAVKITPAHDPNDFEVGKRHKLEFIN 407

Query: 178 VVLPDGKSVNESG-----------------KAFPGEGIIANSSNKVVGLDINGLSSK--E 218
           V   DGK VN +G                 +A   +G+   S N  + L +   S+   E
Sbjct: 408 VFTDDGK-VNSNGGSEFLDMPRFKAREAITEALQKKGLYRGSENNEMRLGVCSRSNDVIE 466

Query: 219 AALKVIKWAEKSGN------------GKRKVNY--------------KLRDWLFARQRYW 252
             +K  +W    G+              R+V                 +RDW  +RQ +W
Sbjct: 467 PMIKP-QWYVNCGDIAKEALHAVTDEENRRVEIIPKQYVADWKRWLENIRDWCISRQLWW 525

Query: 253 GEPIPVIFL 261
           G  IP  ++
Sbjct: 526 GHQIPAWYV 534


>Medtr1g101620.1 | valyl-tRNA synthetase/valine-tRNA ligase | HC |
           chr1:45900200-45890846 | 20130731
          Length = 1053

 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 60/249 (24%), Positives = 91/249 (36%), Gaps = 85/249 (34%)

Query: 60  IIVYTTRPDTIFGATYLVVAPEHPLLLSLVSVAQSKQVEDYVDLASRKSDLERTELQKEK 119
           I+V TTR +T+ G T + V P                                     ++
Sbjct: 324 IVVATTRIETMLGDTAIAVHP-----------------------------------TDDR 348

Query: 120 TGVFTGCYAKNPANGEAIPIWVADYVL--GSYGTGAIMAVPAHDSRDYEFALKYDVPVRW 177
              F G YA +P NG  IPI + D +L    +GTGA+   PAHD  D+E   ++ +    
Sbjct: 349 YSQFHGKYAVHPFNGRKIPI-ICDAILVDPKFGTGAVKITPAHDPNDFEVGKRHKLEFIN 407

Query: 178 VVLPDGKSVNESG-----------------KAFPGEGIIANSSNKVVGLDINGLSSK--E 218
           V   DGK VN +G                 +A   +G+   S N  + L +   S+   E
Sbjct: 408 VFTDDGK-VNSNGGSEFLDMPRFKAREAITEALQKKGLYRGSENNEMRLGVCSRSNDVIE 466

Query: 219 AALKVIKWAEKSGN------------GKRKVNY--------------KLRDWLFARQRYW 252
             +K  +W    G+              R+V                 +RDW  +RQ +W
Sbjct: 467 PMIKP-QWYVNCGDIAKEALHAVTDEENRRVEIIPKQYVADWKRWLENIRDWCISRQLWW 525

Query: 253 GEPIPVIFL 261
           G  IP  ++
Sbjct: 526 GHQIPAWYV 534