Miyakogusa Predicted Gene

Lj4g3v0120360.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0120360.1 Non Characterized Hit- tr|B7FK83|B7FK83_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,93.02,0.000000000000009,no description,NAD(P)-binding
domain; SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
NAD(P)-bindin,GO010191.path2.1
         (68 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g132850.1 | short-chain dehydrogenase/reductase | HC | chr...    82   2e-16

>Medtr4g132850.1 | short-chain dehydrogenase/reductase | HC |
          chr4:55568103-55570446 | 20130731
          Length = 252

 Score = 81.6 bits (200), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 40/43 (93%), Positives = 43/43 (100%)

Query: 1  MEIPKRFRGKVAIVTASTQGIGFSIAERLGLEGASVVISSRKQ 43
          MEIPKRF+GKVAIVTASTQGIGF+IAERLGLEGASVVISSR+Q
Sbjct: 1  MEIPKRFKGKVAIVTASTQGIGFTIAERLGLEGASVVISSRRQ 43