Miyakogusa Predicted Gene

Lj4g3v0120120.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0120120.1 Non Characterized Hit- tr|B6SZ45|B6SZ45_MAIZE
Putative uncharacterized protein OS=Zea mays PE=2 SV=1,69.23,6e-18,E
set domains,Immunoglobulin E-set; RHO GUANINE DISSOCIATION
INHIBITOR-RELATED,NULL; RHO GDP-DISSOCI,CUFF.46488.1
         (253 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g025740.1 | Rho GDP-dissociation inhibitor-like protein | ...   231   6e-61
Medtr4g133060.3 | Rho GDP-dissociation inhibitor-like protein | ...   225   3e-59
Medtr4g133060.1 | Rho GDP-dissociation inhibitor-like protein | ...   225   4e-59
Medtr3g082970.1 | Rho GDP-dissociation inhibitor-like protein | ...   220   8e-58
Medtr4g133060.2 | Rho GDP-dissociation inhibitor-like protein | ...   212   2e-55
Medtr8g097200.1 | Rho GDP-dissociation inhibitor-like protein | ...   165   4e-41
Medtr3g084940.1 | Rho GDP-dissociation inhibitor-like protein | ...   146   1e-35
Medtr7g097270.1 | Rho GDP-dissociation inhibitor-like protein | ...   119   2e-27
Medtr7g097270.2 | Rho GDP-dissociation inhibitor-like protein | ...   117   1e-26

>Medtr2g025740.1 | Rho GDP-dissociation inhibitor-like protein | HC
           | chr2:9216621-9213450 | 20130731
          Length = 233

 Score =  231 bits (588), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 123/177 (69%), Positives = 142/177 (80%), Gaps = 8/177 (4%)

Query: 14  MGFDDDKHNVDTGK------TAIDYASGDEHHERNLTRHVSESSIAITEDDDDDLERKIE 67
           MG DDD  NV + K        ++ +  +     N +R++SESS+A TE++DDD +RKIE
Sbjct: 1   MGLDDD--NVKSDKEEEKSSCVVEGSDNEGAGGGNDSRYMSESSVAATEEEDDDEDRKIE 58

Query: 68  LGPQVTLKEQLEKDKDDESLRRWKEQLLGSVDVNAVGETLEPEVKILSLAIKSPGRDDIV 127
           LGPQ TLKEQLEKDKDDESLRRWKEQLLGSVD+NAVGETLEPEVKILSLAIK+  R DIV
Sbjct: 59  LGPQCTLKEQLEKDKDDESLRRWKEQLLGSVDINAVGETLEPEVKILSLAIKAADRPDIV 118

Query: 128 LPVPETGNPPGLWFTLKEGSRYSLMFTFQVGHNIVSGLKYTNTVWKTGIKVSETLDL 184
           LP+PE GNP GLWFTLKEGS+Y LMFTFQV HNIVSGLKYTNTVWKTGIKV  + ++
Sbjct: 119 LPIPEDGNPKGLWFTLKEGSKYRLMFTFQVNHNIVSGLKYTNTVWKTGIKVDSSKEM 175


>Medtr4g133060.3 | Rho GDP-dissociation inhibitor-like protein | HC
           | chr4:55671024-55669434 | 20130731
          Length = 223

 Score =  225 bits (574), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 116/152 (76%), Positives = 136/152 (89%)

Query: 33  ASGDEHHERNLTRHVSESSIAITEDDDDDLERKIELGPQVTLKEQLEKDKDDESLRRWKE 92
            SG+E  +  L+RH+S+SS+A TEDDDDD+++KI++GPQ TLKEQLEKDKDDESLR+WKE
Sbjct: 13  GSGNEKGKGQLSRHMSDSSVAATEDDDDDVDKKIDVGPQFTLKEQLEKDKDDESLRKWKE 72

Query: 93  QLLGSVDVNAVGETLEPEVKILSLAIKSPGRDDIVLPVPETGNPPGLWFTLKEGSRYSLM 152
           QLLGS+D+++VGETLEPEVK LSLAIKS  RDDI+LPVPETGNP GLWFTLKEGSRY L+
Sbjct: 73  QLLGSIDISSVGETLEPEVKFLSLAIKSGDRDDIILPVPETGNPEGLWFTLKEGSRYRLV 132

Query: 153 FTFQVGHNIVSGLKYTNTVWKTGIKVSETLDL 184
           FTFQV HNIVSGLKYTNTVWKTGIKV  T ++
Sbjct: 133 FTFQVNHNIVSGLKYTNTVWKTGIKVDSTKEM 164


>Medtr4g133060.1 | Rho GDP-dissociation inhibitor-like protein | HC
           | chr4:55671024-55668354 | 20130731
          Length = 222

 Score =  225 bits (573), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 116/152 (76%), Positives = 136/152 (89%)

Query: 33  ASGDEHHERNLTRHVSESSIAITEDDDDDLERKIELGPQVTLKEQLEKDKDDESLRRWKE 92
            SG+E  +  L+RH+S+SS+A TEDDDDD+++KI++GPQ TLKEQLEKDKDDESLR+WKE
Sbjct: 13  GSGNEKGKGQLSRHMSDSSVAATEDDDDDVDKKIDVGPQFTLKEQLEKDKDDESLRKWKE 72

Query: 93  QLLGSVDVNAVGETLEPEVKILSLAIKSPGRDDIVLPVPETGNPPGLWFTLKEGSRYSLM 152
           QLLGS+D+++VGETLEPEVK LSLAIKS  RDDI+LPVPETGNP GLWFTLKEGSRY L+
Sbjct: 73  QLLGSIDISSVGETLEPEVKFLSLAIKSGDRDDIILPVPETGNPEGLWFTLKEGSRYRLV 132

Query: 153 FTFQVGHNIVSGLKYTNTVWKTGIKVSETLDL 184
           FTFQV HNIVSGLKYTNTVWKTGIKV  T ++
Sbjct: 133 FTFQVNHNIVSGLKYTNTVWKTGIKVDSTKEM 164


>Medtr3g082970.1 | Rho GDP-dissociation inhibitor-like protein | HC
           | chr3:37446388-37444903 | 20130731
          Length = 226

 Score =  220 bits (561), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 111/171 (64%), Positives = 131/171 (76%), Gaps = 3/171 (1%)

Query: 14  MGFDDDKHNVDTGKTAIDYASGDEHHERNLTRHVSESSIAITEDDDDDLERKIELGPQVT 73
           MG DD+  N +TG+T+      DEHHE  LTRH SESS+  TE+++D+   KI+LGP  T
Sbjct: 1   MGSDDE--NKETGQTSEAGGEKDEHHEP-LTRHTSESSVYATEEEEDEYGAKIQLGPMCT 57

Query: 74  LKEQLEKDKDDESLRRWKEQLLGSVDVNAVGETLEPEVKILSLAIKSPGRDDIVLPVPET 133
           +KE LEKDKDDESLR+WKEQLLGSVDVN +GE LEPEV   SL+I SPGRDDIVLP+PE 
Sbjct: 58  IKEHLEKDKDDESLRKWKEQLLGSVDVNNIGEILEPEVNFTSLSIISPGRDDIVLPIPED 117

Query: 134 GNPPGLWFTLKEGSRYSLMFTFQVGHNIVSGLKYTNTVWKTGIKVSETLDL 184
           G P GLWFTLKEGS Y L F F V +NIVSGLKYTNTVWKT +KV  + ++
Sbjct: 118 GKPQGLWFTLKEGSPYRLKFNFVVSNNIVSGLKYTNTVWKTAVKVDSSKEM 168


>Medtr4g133060.2 | Rho GDP-dissociation inhibitor-like protein | HC
           | chr4:55670946-55668354 | 20130731
          Length = 196

 Score =  212 bits (540), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 110/138 (79%), Positives = 127/138 (92%)

Query: 47  VSESSIAITEDDDDDLERKIELGPQVTLKEQLEKDKDDESLRRWKEQLLGSVDVNAVGET 106
           +S+SS+A TEDDDDD+++KI++GPQ TLKEQLEKDKDDESLR+WKEQLLGS+D+++VGET
Sbjct: 1   MSDSSVAATEDDDDDVDKKIDVGPQFTLKEQLEKDKDDESLRKWKEQLLGSIDISSVGET 60

Query: 107 LEPEVKILSLAIKSPGRDDIVLPVPETGNPPGLWFTLKEGSRYSLMFTFQVGHNIVSGLK 166
           LEPEVK LSLAIKS  RDDI+LPVPETGNP GLWFTLKEGSRY L+FTFQV HNIVSGLK
Sbjct: 61  LEPEVKFLSLAIKSGDRDDIILPVPETGNPEGLWFTLKEGSRYRLVFTFQVNHNIVSGLK 120

Query: 167 YTNTVWKTGIKVSETLDL 184
           YTNTVWKTGIKV  T ++
Sbjct: 121 YTNTVWKTGIKVDSTKEM 138


>Medtr8g097200.1 | Rho GDP-dissociation inhibitor-like protein | HC
           | chr8:34879061-34881274 | 20130731
          Length = 235

 Score =  165 bits (417), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 93/185 (50%), Positives = 117/185 (63%), Gaps = 18/185 (9%)

Query: 1   MSLAIGVVSNCKSMGFD----DDKHNVDTGKTAIDYASGDEHHERNLTRHVSESSIAITE 56
           MS A+G VS  K + F+    ++  N  T K  ++Y   DE  E        E      +
Sbjct: 1   MSAAVGAVSTTKDVSFNAHLEEEHKNKGTNKVGVNY---DEAEEIVPDEDEEEEPKLELD 57

Query: 57  DDDDDLERKIELGPQVTLKEQLEKDKDDESLRRWKEQLLGSVDVNAVGETLEPEVKILSL 116
                      LGPQ +LKEQLEKDKDDESLR+WKEQLLG+VDV+AVGE +EPEVKI+SL
Sbjct: 58  -----------LGPQFSLKEQLEKDKDDESLRKWKEQLLGNVDVSAVGEKIEPEVKIVSL 106

Query: 117 AIKSPGRDDIVLPVPETGNPPGLWFTLKEGSRYSLMFTFQVGHNIVSGLKYTNTVWKTGI 176
            I   GR D++LP+P T +     FTLKEGS+Y L F+F V +NIVSGL+YTN VWKTG+
Sbjct: 107 TIICQGRPDLILPIPFTADSKKSMFTLKEGSQYRLKFSFTVSNNIVSGLRYTNVVWKTGV 166

Query: 177 KVSET 181
           +V  T
Sbjct: 167 RVENT 171


>Medtr3g084940.1 | Rho GDP-dissociation inhibitor-like protein | HC
           | chr3:38372146-38370475 | 20130731
          Length = 230

 Score =  146 bits (369), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 74/113 (65%), Positives = 89/113 (78%), Gaps = 1/113 (0%)

Query: 68  LGPQVTLKEQLEKDKDDESLRRWKEQLLGSVDVNAVGETLEPEVKILSLAIKSPGRD-DI 126
           LGPQ TLKEQLEKDKDDESLR+WKEQLLGSVD++AVGE+ +PEVKI SL I +     D+
Sbjct: 52  LGPQFTLKEQLEKDKDDESLRKWKEQLLGSVDISAVGESKDPEVKIQSLTITTCSESPDL 111

Query: 127 VLPVPETGNPPGLWFTLKEGSRYSLMFTFQVGHNIVSGLKYTNTVWKTGIKVS 179
           VLP+P T +P    F LKEGS+  + FTF V +NIVSGLKYTN V KTG++V+
Sbjct: 112 VLPIPFTNDPKKSLFILKEGSQCRMKFTFTVSNNIVSGLKYTNIVSKTGVRVN 164


>Medtr7g097270.1 | Rho GDP-dissociation inhibitor-like protein | HC
           | chr7:39130480-39134866 | 20130731
          Length = 219

 Score =  119 bits (299), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 63/132 (47%), Positives = 90/132 (68%), Gaps = 2/132 (1%)

Query: 51  SIAITEDDDDDLERKIELGPQVTLKEQLEKDKDDESLRRWKEQLLGSVDVNAVGETLEPE 110
           +  +  +D++D  +     P ++LKEQ+EKDK+DESLRRWKE+LLGS++ + + + LEPE
Sbjct: 29  TFHVASEDEEDEGQVFVPSPLLSLKEQIEKDKEDESLRRWKEKLLGSLESD-LDDQLEPE 87

Query: 111 VKILSLAIKSPGRDDIVLPVP-ETGNPPGLWFTLKEGSRYSLMFTFQVGHNIVSGLKYTN 169
           VK  S+ I S    +IV P+P E      + FTL+EGSRY L   F V HN+VSGL Y+N
Sbjct: 88  VKFHSIGILSEDFGEIVTPLPVEEHQNSRMLFTLREGSRYQLKLQFSVMHNLVSGLTYSN 147

Query: 170 TVWKTGIKVSET 181
           TVWK G++V ++
Sbjct: 148 TVWKGGLQVDQS 159


>Medtr7g097270.2 | Rho GDP-dissociation inhibitor-like protein | HC
           | chr7:39130480-39131999 | 20130731
          Length = 177

 Score =  117 bits (293), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 62/128 (48%), Positives = 87/128 (67%), Gaps = 2/128 (1%)

Query: 51  SIAITEDDDDDLERKIELGPQVTLKEQLEKDKDDESLRRWKEQLLGSVDVNAVGETLEPE 110
           +  +  +D++D  +     P ++LKEQ+EKDK+DESLRRWKE+LLGS++ + + + LEPE
Sbjct: 29  TFHVASEDEEDEGQVFVPSPLLSLKEQIEKDKEDESLRRWKEKLLGSLESD-LDDQLEPE 87

Query: 111 VKILSLAIKSPGRDDIVLPVP-ETGNPPGLWFTLKEGSRYSLMFTFQVGHNIVSGLKYTN 169
           VK  S+ I S    +IV P+P E      + FTL+EGSRY L   F V HN+VSGL Y+N
Sbjct: 88  VKFHSIGILSEDFGEIVTPLPVEEHQNSRMLFTLREGSRYQLKLQFSVMHNLVSGLTYSN 147

Query: 170 TVWKTGIK 177
           TVWK G++
Sbjct: 148 TVWKGGLQ 155