Miyakogusa Predicted Gene

Lj4g3v0071010.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0071010.1 Non Characterized Hit- tr|I1ICA2|I1ICA2_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,75,4e-19,SUBFAMILY NOT NAMED,NULL; BNIP1-RELATED,NULL;
Sec20,Sec20,NODE_45842_length_295_cov_45.677967.path1.1
         (68 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g028660.1 | vesicle transporter Sec20, putative | HC | chr...   130   3e-31
Medtr2g028660.2 | vesicle transporter Sec20, putative | HC | chr...   130   4e-31

>Medtr2g028660.1 | vesicle transporter Sec20, putative | HC |
           chr2:10627176-10632598 | 20130731
          Length = 292

 Score =  130 bits (327), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 66/68 (97%), Positives = 67/68 (98%)

Query: 1   MTSAAESITDSLRRTRQLMVQEVERNTSTLMTLDESTGVLKKAESEYKGHRSLLMRTRNL 60
           MTSAAESIT+SLRRTRQLMVQEVERNTSTLMTLDESTGVLKKAESEYKGHRSLL RTRNL
Sbjct: 142 MTSAAESITESLRRTRQLMVQEVERNTSTLMTLDESTGVLKKAESEYKGHRSLLTRTRNL 201

Query: 61  LSTMQRQD 68
           LSTMQRQD
Sbjct: 202 LSTMQRQD 209


>Medtr2g028660.2 | vesicle transporter Sec20, putative | HC |
           chr2:10627176-10632595 | 20130731
          Length = 310

 Score =  130 bits (326), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 66/68 (97%), Positives = 67/68 (98%)

Query: 1   MTSAAESITDSLRRTRQLMVQEVERNTSTLMTLDESTGVLKKAESEYKGHRSLLMRTRNL 60
           MTSAAESIT+SLRRTRQLMVQEVERNTSTLMTLDESTGVLKKAESEYKGHRSLL RTRNL
Sbjct: 160 MTSAAESITESLRRTRQLMVQEVERNTSTLMTLDESTGVLKKAESEYKGHRSLLTRTRNL 219

Query: 61  LSTMQRQD 68
           LSTMQRQD
Sbjct: 220 LSTMQRQD 227