Miyakogusa Predicted Gene

Lj4g3v0037550.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0037550.1 Non Characterized Hit- tr|I1KNQ7|I1KNQ7_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,81.45,0,seg,NULL;
DUF3594,Protein of unknown function DUF3594; PHD,Zinc finger,
PHD-finger; ZF_PHD_2,Zinc fi,CUFF.46560.1
         (275 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g134510.1 | PHD finger alfin-like protein | HC | chr4:5632...   370   e-103
Medtr8g019520.1 | alfin-like transcription factor | HC | chr8:68...   299   2e-81
Medtr8g019520.2 | alfin-like transcription factor | HC | chr8:68...   296   2e-80
Medtr1g015185.1 | PHD finger alfin-like protein | HC | chr1:3751...   283   1e-76
Medtr2g040990.1 | PHD finger alfin-like protein | HC | chr2:1796...   283   1e-76
Medtr2g099500.1 | PHD finger alfin-like protein | HC | chr2:4265...   274   7e-74
Medtr4g015830.1 | PHD finger alfin-like protein | HC | chr4:4791...   243   1e-64
Medtr7g068590.1 | PHD finger alfin-like protein | HC | chr7:2513...   241   5e-64
Medtr1g015185.2 | PHD finger alfin-like protein | HC | chr1:3751...   199   2e-51
Medtr8g066480.1 | PHD6, putative | HC | chr8:27655204-27653875 |...    89   4e-18

>Medtr4g134510.1 | PHD finger alfin-like protein | HC |
           chr4:56329915-56334966 | 20130731
          Length = 256

 Score =  370 bits (951), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 190/280 (67%), Positives = 203/280 (72%), Gaps = 29/280 (10%)

Query: 1   MEAIP-HPVPRTVEEVFSDFKGRRAALINALTTGXXXXXXXXXXXXXXXXTILLVVADVD 59
           ME +  HPVPRTVEEVFSD+KGRRA LI ALTT                        DV+
Sbjct: 1   MEGMAQHPVPRTVEEVFSDYKGRRAGLIKALTT------------------------DVE 36

Query: 60  KFYQQCDPEKENLCLYGFPNETWXXXXXXXXXXXXXXXXXXGINFARDGMHEKDWLSLVA 119
           KFYQ CDPEKENLCLYGFPNETW                  GINFARDGM EKDWLSLVA
Sbjct: 37  KFYQLCDPEKENLCLYGFPNETWEVNLPVEEVPPELPEPALGINFARDGMQEKDWLSLVA 96

Query: 120 VHSDSWLLAVAFYFGARFGFGKTERKRLFQMINDMPTIFELVTGAAKQSKDQLVANNNG- 178
           VHSDSWLLAVAFYFGARFGFGK +RKRLFQMIND+PT+FEL TG AKQSKDQL A+NNG 
Sbjct: 97  VHSDSWLLAVAFYFGARFGFGKNDRKRLFQMINDLPTVFELATGTAKQSKDQLTAHNNGS 156

Query: 179 -SKFKPSGKSRPSEPQAKGMKMSAPPK-XXXXXXXXXXXXXQGATCGACGENYGTDEFWI 236
            SK+K SGKSR SE Q KG+KMSAP K              QGATCGACG+NYGTDEFWI
Sbjct: 157 NSKYKSSGKSRQSESQTKGVKMSAPVKEEVDSGEEEEDDDEQGATCGACGDNYGTDEFWI 216

Query: 237 CCDMCERWFHGKCVKITPAKAEHIKQYKCPSCS-KRARVG 275
           CCDMCE+WFHGKCVKITPAKAEHIKQYKCP CS K+ R+G
Sbjct: 217 CCDMCEKWFHGKCVKITPAKAEHIKQYKCPGCSIKKPRIG 256


>Medtr8g019520.1 | alfin-like transcription factor | HC |
           chr8:6883372-6878935 | 20130731
          Length = 256

 Score =  299 bits (765), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 163/279 (58%), Positives = 187/279 (67%), Gaps = 30/279 (10%)

Query: 1   MEAIPHPVPRTVEEVFSDFKGRRAALINALTTGXXXXXXXXXXXXXXXXTILLVVADVDK 60
           M+A     PRTVEEVF DFKGRRA LI ALTT                        DV++
Sbjct: 1   MDARTQYNPRTVEEVFRDFKGRRAGLIKALTT------------------------DVEE 36

Query: 61  FYQQCDPEKENLCLYGFPNETWXXXXXXXXXXXXXXXXXXGINFARDGMHEKDWLSLVAV 120
           FY QCDPEKENLCLYGFP+E W                  GINFARDGM EKDWLSLVAV
Sbjct: 37  FYTQCDPEKENLCLYGFPSEQWEVNLPAEEVPPELPEPVLGINFARDGMQEKDWLSLVAV 96

Query: 121 HSDSWLLAVAFYFGARFGFGKTERKRLFQMINDMPTIFELVTGAAKQS--KDQLVANNNG 178
           HSDSWL+A+A+YFGARFGF K++RKRLF MIND+P+I+E+VTGAAK+   +   V+N++G
Sbjct: 97  HSDSWLIAIAYYFGARFGFDKSDRKRLFNMINDLPSIYEVVTGAAKKQVKEKSSVSNHSG 156

Query: 179 SKFKPSGKSRPSEPQAKGMK-MSAPPKXXXXXXXXXXXXXQGAT-CGACGENYGTDEFWI 236
           SK K S K+R  EPQ K  K +  P                G T CGACGE+YGTDEFWI
Sbjct: 157 SKSKSSSKARAPEPQVKQTKPLELPKDDEVEELDEEDEDEHGETLCGACGEHYGTDEFWI 216

Query: 237 CCDMCERWFHGKCVKITPAKAEHIKQYKCPSCS--KRAR 273
           CCD+CE+WFHGKCVKITPA+AEHIKQYKCPSCS  KRAR
Sbjct: 217 CCDICEKWFHGKCVKITPARAEHIKQYKCPSCSNNKRAR 255


>Medtr8g019520.2 | alfin-like transcription factor | HC |
           chr8:6883362-6878948 | 20130731
          Length = 257

 Score =  296 bits (758), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 159/280 (56%), Positives = 181/280 (64%), Gaps = 31/280 (11%)

Query: 1   MEAIPHPVPRTVEEVFSDFKGRRAALINALTTGXXXXXXXXXXXXXXXXTILLVVADVDK 60
           M+A     PRTVEEVF DFKGRRA LI ALTT                        DV++
Sbjct: 1   MDARTQYNPRTVEEVFRDFKGRRAGLIKALTT------------------------DVEE 36

Query: 61  FYQQCDPEKENLCLYGFPNETWXXXXXXXXXXXXXXXXXXGINFARDGMHEKDWLSLVAV 120
           FY QCDPEKENLCLYGFP+E W                  GINFARDGM EKDWLSLVAV
Sbjct: 37  FYTQCDPEKENLCLYGFPSEQWEVNLPAEEVPPELPEPVLGINFARDGMQEKDWLSLVAV 96

Query: 121 HSDSWLLAVAFYFGARFGFGKTERKRLFQMINDMPTIFELVTGAA-KQSKDQLVANNNGS 179
           HSDSWL+A+A+YFGARFGF K++RKRLF MIND+P+I+E+VTGAA KQ K++   +N+  
Sbjct: 97  HSDSWLIAIAYYFGARFGFDKSDRKRLFNMINDLPSIYEVVTGAAKKQVKEKSSVSNHSG 156

Query: 180 KFKPSGK--SRPSEPQAKGMK-MSAPPKXXXXXXXXXXXXXQGAT-CGACGENYGTDEFW 235
               S     R  EPQ K  K +  P                G T CGACGE+YGTDEFW
Sbjct: 157 SKSKSSSKAQRAPEPQVKQTKPLELPKDDEVEELDEEDEDEHGETLCGACGEHYGTDEFW 216

Query: 236 ICCDMCERWFHGKCVKITPAKAEHIKQYKCPSCS--KRAR 273
           ICCD+CE+WFHGKCVKITPA+AEHIKQYKCPSCS  KRAR
Sbjct: 217 ICCDICEKWFHGKCVKITPARAEHIKQYKCPSCSNNKRAR 256


>Medtr1g015185.1 | PHD finger alfin-like protein | HC |
           chr1:3751255-3746618 | 20130731
          Length = 263

 Score =  283 bits (724), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 158/286 (55%), Positives = 184/286 (64%), Gaps = 37/286 (12%)

Query: 1   MEAIPHPV-PRTVEEVFSDFKGRRAALINALTTGXXXXXXXXXXXXXXXXTILLVVADVD 59
           M+ +  P  PRTVEEVF DFKGRRAALI ALTT                        DVD
Sbjct: 1   MDVVGAPYNPRTVEEVFRDFKGRRAALIKALTT------------------------DVD 36

Query: 60  KFYQQCDPEKENLCLYGFPNETWXXXXXXXXXXXXXXXXXXGINFARDGMHEKDWLSLVA 119
            FYQQCDPEKENLCLYGFP+E W                  GINFARDGM EKDWLSLVA
Sbjct: 37  VFYQQCDPEKENLCLYGFPSEQWEVNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVA 96

Query: 120 VHSDSWLLAVAFYFGARFGFGKTERKRLFQMINDMPTIFELVTGAA-KQSKDQLVANNNG 178
           VHSD+WLL+VAFYFGARFGF K +RKRLF MIND+PTIFE VTG+  KQ K++ V+NN+ 
Sbjct: 97  VHSDAWLLSVAFYFGARFGFDKADRKRLFNMINDLPTIFEAVTGSGRKQGKEKSVSNNSS 156

Query: 179 SKFKPSG------KSRPSEPQAKGMKMSAP----PKXXXXXXXXXXXXXQGATCGACGEN 228
           +K K +       + + S+P A  M+M +      +                 CGACG++
Sbjct: 157 TKSKSNSKRSSEPQPKFSKPMAMAMQMQSKDEVEDEDGVGVDEEDEEEHGETLCGACGDS 216

Query: 229 YGTDEFWICCDMCERWFHGKCVKITPAKAEHIKQYKCPSCS-KRAR 273
           Y  DEFWICCD+CE+WFHGKCVKITPA+AEHIKQYKCP+CS KRAR
Sbjct: 217 YAADEFWICCDICEKWFHGKCVKITPARAEHIKQYKCPACSNKRAR 262


>Medtr2g040990.1 | PHD finger alfin-like protein | HC |
           chr2:17960762-17956593 | 20130731
          Length = 253

 Score =  283 bits (724), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 152/270 (56%), Positives = 176/270 (65%), Gaps = 34/270 (12%)

Query: 9   PRTVEEVFSDFKGRRAALINALTTGXXXXXXXXXXXXXXXXTILLVVADVDKFYQQCDPE 68
           PRTVE VF DFKGRRA LI ALTT                        DV+ FYQQCDPE
Sbjct: 12  PRTVEAVFRDFKGRRAGLIKALTT------------------------DVEDFYQQCDPE 47

Query: 69  KENLCLYGFPNETWXXXXXXXXXXXXXXXXXXGINFARDGMHEKDWLSLVAVHSDSWLLA 128
           KENL LYG+P E W                  GINFARDGM EKDWLSLVAVHSD+WLL+
Sbjct: 48  KENLSLYGYPGELWEVTLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDTWLLS 107

Query: 129 VAFYFGARFGFGKTERKRLFQMINDMPTIFELVTGAA-KQSKDQ-LVANNNGSKFKPSGK 186
           VAFYFGARFGF K +RKRLF +IND+PTIFE+VTG+A KQ+K++  V+++N  K K   K
Sbjct: 108 VAFYFGARFGFDKADRKRLFTLINDLPTIFEVVTGSAKKQTKEKPSVSSHNSIKSKSGSK 167

Query: 187 SRPSEPQAKGMKMSAPPKXXXXXXXXXXXXXQGATCGACGENY--GTDEFWICCDMCERW 244
           +R SE      K S PP              QG  C ACGE+Y   +DEFWICCD+CE+W
Sbjct: 168 ARGSEL----AKYSKPPAKEDDEGVDDEEEDQG-ECAACGESYVSASDEFWICCDICEKW 222

Query: 245 FHGKCVKITPAKAEHIKQYKCPSC-SKRAR 273
           +HGKCVKITPA+AEHIKQYKCP+C +KR R
Sbjct: 223 YHGKCVKITPARAEHIKQYKCPACNNKRVR 252


>Medtr2g099500.1 | PHD finger alfin-like protein | HC |
           chr2:42658288-42662190 | 20130731
          Length = 250

 Score =  274 bits (700), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 150/269 (55%), Positives = 178/269 (66%), Gaps = 29/269 (10%)

Query: 10  RTVEEVFSDFKGRRAALINALTTGXXXXXXXXXXXXXXXXTILLVVADVDKFYQQCDPEK 69
           RTVE++F DFK RR  +I ALT                         DV+ FY+QCDPEK
Sbjct: 6   RTVEQIFDDFKSRRTGIIKALTV------------------------DVEDFYRQCDPEK 41

Query: 70  ENLCLYGFPNETWXXXXXXXXXXXXXXXXXXGINFARDGMHEKDWLSLVAVHSDSWLLAV 129
           ENLCLYG  NE W                  GINFARDGM EKDWL+LVAVHSD+WLL++
Sbjct: 42  ENLCLYGLLNENWEVNLPVEEVPPEIPEPVLGINFARDGMQEKDWLALVAVHSDTWLLSL 101

Query: 130 AFYFGARFGFGKTERKRLFQMINDMPTIFELVTGAAKQS--KDQLVANNNGSKFKPSGKS 187
           AFYFGARFGF K +RKRLF +IN++PT+FE+VTGAAK+   +   V+NN+GSK K S K+
Sbjct: 102 AFYFGARFGFDKADRKRLFNLINELPTVFEVVTGAAKKQVKEKSSVSNNSGSKSKSSSKA 161

Query: 188 RPSEPQAKGMKMSAPPKXXXXXXXXXXXXXQG-ATCGACGENYGTDEFWICCDMCERWFH 246
           R  E Q++  K +  PK             QG ATCGACG++ G DEFWICCD+CE+WFH
Sbjct: 162 RAPEAQSRQPKAALLPKDEEEELEEQDDDEQGEATCGACGDSNGADEFWICCDICEKWFH 221

Query: 247 GKCVKITPAKAEHIKQYKCPSCS--KRAR 273
           GKCVKITPA+AEHIKQYKCPSCS  KRAR
Sbjct: 222 GKCVKITPARAEHIKQYKCPSCSSNKRAR 250


>Medtr4g015830.1 | PHD finger alfin-like protein | HC |
           chr4:4791805-4787747 | 20130731
          Length = 240

 Score =  243 bits (620), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 134/266 (50%), Positives = 158/266 (59%), Gaps = 34/266 (12%)

Query: 9   PRTVEEVFSDFKGRRAALINALTTGXXXXXXXXXXXXXXXXTILLVVADVDKFYQQCDPE 68
           PRTVEE+F DF  RR  ++ ALT                         DVD+FY  CDP+
Sbjct: 7   PRTVEEIFKDFSSRRDGIVRALT------------------------QDVDEFYALCDPD 42

Query: 69  KENLCLYGFPNETWXXXXXXXXXXXXXXXXXXGINFARDGMHEKDWLSLVAVHSDSWLLA 128
           K+NLCLYG  NE+W                  GINFARDGM+ +DWLSLVAVHSDSWLL+
Sbjct: 43  KDNLCLYGHTNESWEVTLPAEEVPPELPEPALGINFARDGMNRRDWLSLVAVHSDSWLLS 102

Query: 129 VAFYFGARFGFGKTERKRLFQMINDMPTIFELVTGAAKQSKDQLVANNNGSKFKPSGKSR 188
           VAFY GAR    + ERKRLF +IN++PT+FE+VT   K  KD+   ++ GSK + S K R
Sbjct: 103 VAFYLGARLN--RNERKRLFSLINELPTVFEVVTDR-KPIKDKPTVDS-GSKSRGSTK-R 157

Query: 189 PSEPQAKGMKMSAPPKXXXXXXXXXXXXXQGATCGACGENYGTDEFWICCDMCERWFHGK 248
            S+ Q K    S P                   CG+CG NY  DEFWI CD+CERW+HGK
Sbjct: 158 SSDGQVK----SNPKLVDDQGYEEEEDEHSETLCGSCGGNYNADEFWIGCDICERWYHGK 213

Query: 249 CVKITPAKAEHIKQYKCPSCS-KRAR 273
           CVKITPAKAE IKQYKCPSCS KR R
Sbjct: 214 CVKITPAKAESIKQYKCPSCSIKRGR 239


>Medtr7g068590.1 | PHD finger alfin-like protein | HC |
           chr7:25139885-25143273 | 20130731
          Length = 242

 Score =  241 bits (616), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 133/264 (50%), Positives = 157/264 (59%), Gaps = 33/264 (12%)

Query: 9   PRTVEEVFSDFKGRRAALINALTTGXXXXXXXXXXXXXXXXTILLVVADVDKFYQQCDPE 68
           PRTVEE+F D+  RR A++ ALT                         DVD+FY  CDP+
Sbjct: 7   PRTVEEIFKDYSARRIAVVRALTQ------------------------DVDEFYGLCDPD 42

Query: 69  KENLCLYGFPNETWXXXXXXXXXXXXXXXXXXGINFARDGMHEKDWLSLVAVHSDSWLLA 128
           K+NLCLYG  NE+W                  GINFARDGM+ +DWLSLVAVHSDSWLL+
Sbjct: 43  KDNLCLYGHNNESWEVTLPAEEVPPELPEPALGINFARDGMNRRDWLSLVAVHSDSWLLS 102

Query: 129 VAFYFGARFGFGKTERKRLFQMINDMPTIFELVTGAAKQSKDQLVANNNGSKFKPSGKSR 188
           VAFY GAR    + ERKRLF +IN++PT+FE+VT   K  KD   A ++GSK + S K R
Sbjct: 103 VAFYLGARLN--RNERKRLFSLINELPTVFEIVTDR-KPIKDNKPAADSGSKSRGSTK-R 158

Query: 189 PSEPQAKGMKMSAPPKXXXXXXXXXXXXXQGAT-CGACGENYGTDEFWICCDMCERWFHG 247
            S+ Q K    S P                  T CG+CG NY  DEFWI CD+CERW+HG
Sbjct: 159 SSDGQVK----SNPKFPVDDGYEEEEEDEHSETLCGSCGGNYNADEFWIGCDICERWYHG 214

Query: 248 KCVKITPAKAEHIKQYKCPSCSKR 271
           KCVKITPAKAE IKQYKCP CS R
Sbjct: 215 KCVKITPAKAESIKQYKCPQCSIR 238


>Medtr1g015185.2 | PHD finger alfin-like protein | HC |
           chr1:3751249-3746646 | 20130731
          Length = 206

 Score =  199 bits (506), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 105/175 (60%), Positives = 115/175 (65%), Gaps = 26/175 (14%)

Query: 1   MEAIPHPV-PRTVEEVFSDFKGRRAALINALTTGXXXXXXXXXXXXXXXXTILLVVADVD 59
           M+ +  P  PRTVEEVF DFKGRRAALI ALTT                        DVD
Sbjct: 1   MDVVGAPYNPRTVEEVFRDFKGRRAALIKALTT------------------------DVD 36

Query: 60  KFYQQCDPEKENLCLYGFPNETWXXXXXXXXXXXXXXXXXXGINFARDGMHEKDWLSLVA 119
            FYQQCDPEKENLCLYGFP+E W                  GINFARDGM EKDWLSLVA
Sbjct: 37  VFYQQCDPEKENLCLYGFPSEQWEVNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVA 96

Query: 120 VHSDSWLLAVAFYFGARFGFGKTERKRLFQMINDMPTIFELVTGAA-KQSKDQLV 173
           VHSD+WLL+VAFYFGARFGF K +RKRLF MIND+PTIFE VTG+  KQ K++ V
Sbjct: 97  VHSDAWLLSVAFYFGARFGFDKADRKRLFNMINDLPTIFEAVTGSGRKQGKEKSV 151


>Medtr8g066480.1 | PHD6, putative | HC | chr8:27655204-27653875 |
           20130731
          Length = 152

 Score = 89.0 bits (219), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 63/134 (47%), Positives = 79/134 (58%), Gaps = 21/134 (15%)

Query: 144 RKRLFQMINDMPTIFELVTGAA-KQSKDQLVANNNGSKFKPSG-KSRPSEPQAKGMKMSA 201
           RKRLF  IND+PTIFE+VTG+A KQ+K++   +++ S    SG K+R SE      K S 
Sbjct: 29  RKRLFTPINDLPTIFEVVTGSAKKQTKEKPSVSSHNSNKSKSGSKARGSE----LAKYSK 84

Query: 202 PPKXXXXXXXXXXXXXQGATCGACGENYGTDEFWICCDMCERWFHGKCV-KITPAKAEHI 260
           PP              QG  C ACGENY +            W+HGKCV KITPA+AE I
Sbjct: 85  PPAKEDDEEVDDEEEYQGE-CTACGENYVS------------WYHGKCVKKITPAQAEQI 131

Query: 261 KQYKCPSC-SKRAR 273
           KQY+CP+C +KR R
Sbjct: 132 KQYRCPTCNNKRVR 145