Miyakogusa Predicted Gene

Lj3g3v3765450.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3765450.1 Non Characterized Hit- tr|I3S6F5|I3S6F5_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,98.8,0,coiled-coil,NULL; seg,NULL; SNARE_assoc,SNARE associated
Golgi protein; UNCHARACTERIZED,NULL,CUFF.46367.1
         (330 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g032670.1 | SNARE associated family protein | HC | chr4:11...   298   4e-81
Medtr2g022180.1 | TVP38/TMEM64 family membrane slr0305-like prot...    82   7e-16
Medtr4g117280.1 | TVP38/TMEM64 family membrane slr0305-like prot...    75   7e-14
Medtr4g117280.2 | TVP38/TMEM64 family membrane slr0305-like prot...    75   7e-14
Medtr2g028450.1 | SNARE associated family protein | HC | chr2:10...    51   1e-06

>Medtr4g032670.1 | SNARE associated family protein | HC |
           chr4:11261721-11269691 | 20130731
          Length = 331

 Score =  298 bits (764), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 155/209 (74%), Positives = 163/209 (77%)

Query: 122 YIYRDPINSFLNQLSLFIEGYGPTGYAIFVAVYAGLEILAIPAIPLTMSAGLLFGSVTGT 181
           YIYR+PIN+FLNQ S FIEGYG  GYA+FVAVYAGLEILAIPAIPLTMSAGLLFGS+TGT
Sbjct: 122 YIYREPINTFLNQFSGFIEGYGSAGYALFVAVYAGLEILAIPAIPLTMSAGLLFGSLTGT 181

Query: 182 VIVSISGTVAASVAFLIARYFARERILKLVEGNKKFLAVDKAIGENGFKVVTXXXXXXXX 241
           +IVSISGTVAASVAFLIARYFARERILKLVEGNKKFLA+DKAIGENGFKVVT        
Sbjct: 182 IIVSISGTVAASVAFLIARYFARERILKLVEGNKKFLAIDKAIGENGFKVVTLLRLSPLL 241

Query: 242 XXXXGNYLYGLTSVKFLPYVLGSWLGMLPGTWAYVSAGAFGRAIIQEESELKVXXXXXXX 301
               GNYLYGLTSVKFLPYVLGSWLGMLPGTWAYVSAGAFGRAIIQEESEL         
Sbjct: 242 PFSLGNYLYGLTSVKFLPYVLGSWLGMLPGTWAYVSAGAFGRAIIQEESELSSLGGNNQL 301

Query: 302 XXXXXXXXXXXXXXXXXXXXXKDAIKDIE 330
                                KDA+KDI+
Sbjct: 302 LTLGLGLLATALAATYVTKLAKDAVKDID 330


>Medtr2g022180.1 | TVP38/TMEM64 family membrane slr0305-like protein
           | HC | chr2:7614462-7621452 | 20130731
          Length = 274

 Score = 82.0 bits (201), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 55/154 (35%), Positives = 75/154 (48%), Gaps = 1/154 (0%)

Query: 127 PINSFLNQLSLFIE-GYGPTGYAIFVAVYAGLEILAIPAIPLTMSAGLLFGSVTGTVIVS 185
           PI   +    L+++   G  G  +    Y  L +LA+PA  LT+  G LFG   G V  S
Sbjct: 29  PIEKIMKDFLLWVDRDLGAWGPLVLAVAYIPLTVLAVPASVLTLGGGYLFGLPVGFVADS 88

Query: 186 ISGTVAASVAFLIARYFARERILKLVEGNKKFLAVDKAIGENGFKVVTXXXXXXXXXXXX 245
           I  TV A  AFL+ R   R  ++  ++   KF +V  AI  +GFK+V             
Sbjct: 89  IGATVGAGAAFLLGRTIGRPFVVSRLKDYPKFKSVAIAIRRSGFKIVLLLRLVPLLPFNM 148

Query: 246 GNYLYGLTSVKFLPYVLGSWLGMLPGTWAYVSAG 279
            NYL  +T V  + Y+L SWLGM+P T A V  G
Sbjct: 149 LNYLLSVTPVSLVEYMLASWLGMMPITLALVYVG 182


>Medtr4g117280.1 | TVP38/TMEM64 family membrane slr0305-like protein
           | HC | chr4:48600647-48596094 | 20130731
          Length = 294

 Score = 75.5 bits (184), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 52/154 (33%), Positives = 71/154 (46%), Gaps = 1/154 (0%)

Query: 127 PINSFLNQLSLFIE-GYGPTGYAIFVAVYAGLEILAIPAIPLTMSAGLLFGSVTGTVIVS 185
           PI   L    ++++   GP G       Y  L ILA+PA  LT+  G LFG   G V  S
Sbjct: 49  PIEKILKDFLIWVDQDLGPWGPLALAVAYIPLTILAVPASVLTLGGGYLFGLPVGIVADS 108

Query: 186 ISGTVAASVAFLIARYFARERILKLVEGNKKFLAVDKAIGENGFKVVTXXXXXXXXXXXX 245
           +  T+ A  AFL+     +  +   ++   +F +V  A   +GFK+V             
Sbjct: 109 VGATIGAVAAFLLGGTIGKSFVASKLKDYPQFKSVSIATQRSGFKIVFLLRLVPLLPYNI 168

Query: 246 GNYLYGLTSVKFLPYVLGSWLGMLPGTWAYVSAG 279
            NYL  +T V    Y L SWLGM+P T A V AG
Sbjct: 169 LNYLLSVTPVPLWEYTLASWLGMMPLTVALVYAG 202


>Medtr4g117280.2 | TVP38/TMEM64 family membrane slr0305-like protein
           | HC | chr4:48600709-48596099 | 20130731
          Length = 274

 Score = 75.5 bits (184), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 52/154 (33%), Positives = 71/154 (46%), Gaps = 1/154 (0%)

Query: 127 PINSFLNQLSLFIE-GYGPTGYAIFVAVYAGLEILAIPAIPLTMSAGLLFGSVTGTVIVS 185
           PI   L    ++++   GP G       Y  L ILA+PA  LT+  G LFG   G V  S
Sbjct: 29  PIEKILKDFLIWVDQDLGPWGPLALAVAYIPLTILAVPASVLTLGGGYLFGLPVGIVADS 88

Query: 186 ISGTVAASVAFLIARYFARERILKLVEGNKKFLAVDKAIGENGFKVVTXXXXXXXXXXXX 245
           +  T+ A  AFL+     +  +   ++   +F +V  A   +GFK+V             
Sbjct: 89  VGATIGAVAAFLLGGTIGKSFVASKLKDYPQFKSVSIATQRSGFKIVFLLRLVPLLPYNI 148

Query: 246 GNYLYGLTSVKFLPYVLGSWLGMLPGTWAYVSAG 279
            NYL  +T V    Y L SWLGM+P T A V AG
Sbjct: 149 LNYLLSVTPVPLWEYTLASWLGMMPLTVALVYAG 182


>Medtr2g028450.1 | SNARE associated family protein | HC |
           chr2:10555701-10558445 | 20130731
          Length = 373

 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 67/140 (47%), Gaps = 6/140 (4%)

Query: 144 PTGYAIFVAVYAGLEILAIPAIPLTMSAGLLFGSVTGTVIVSISGTVAASVAFLIARYFA 203
           P    + +A  A   +L IP+ P    AG++FG   G VI+ +  T+   + +LI   F 
Sbjct: 141 PVLALVLIASLALFPVLLIPSGPSMWLAGMIFGYGLGFVIIMVGTTIGMVLPYLIGLKF- 199

Query: 204 RERILKLVEGNKKFLAVDKAIGE----NGFKVVTXXXXXXXXXXXXGNYLYGLTSVKFLP 259
           R+RI + +E   +  A+ +  GE    + F+VV              NY   +T +KF P
Sbjct: 200 RDRIHQWLEKWPQNAAMIRLAGEGSWFHQFQVVALFRTSPFPYTIF-NYAVVVTDMKFWP 258

Query: 260 YVLGSWLGMLPGTWAYVSAG 279
           Y  GS  GM+P  + Y+ +G
Sbjct: 259 YFCGSVAGMVPEAFIYIYSG 278