Miyakogusa Predicted Gene
- Lj3g3v3754400.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v3754400.1 Non Characterized Hit- tr|D8R8J0|D8R8J0_SELML
Putative uncharacterized protein OS=Selaginella
moelle,31.79,0.000000000000006,DUF4149,Domain of unknown function
DUF4149; LATE EMBRYOGENESIS ABUNDANT PROTEIN, PUTATIVE,NULL;
LATE,CUFF.46321.1
(406 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g033265.1 | late embryogenesis abundant protein (LEA) fami... 372 e-103
Medtr4g033230.1 | late embryogenesis abundant protein (LEA) fami... 372 e-103
Medtr1g087320.1 | late embryogenesis abundant protein (LEA) fami... 68 2e-11
>Medtr4g033265.1 | late embryogenesis abundant protein (LEA) family
protein | HC | chr4:11644827-11646813 | 20130731
Length = 441
Score = 372 bits (956), Expect = e-103, Method: Compositional matrix adjust.
Identities = 222/454 (48%), Positives = 284/454 (62%), Gaps = 61/454 (13%)
Query: 1 MMNXXXXXXXXXXXXXXXMFSPTPPKQGANTIVKEGHRVVVVEYDQDGHQNTKISISPPE 60
MMN +FSP P KQ NTIVKEGH+VVVVEYDQDG+QNTKISI P +
Sbjct: 1 MMNLLALSLFITSLTTASIFSPNP-KQQPNTIVKEGHKVVVVEYDQDGYQNTKISILPEQ 59
Query: 61 P-----DHS--DSNLLDNARDKIKEAASVFPNMPGTGMA-GSSSSHSQDAFLHAP----- 107
D++ DS ++N +D+IKEAASV PNM G G++ +SSSH LH P
Sbjct: 60 QQTHQQDYTNMDSGFIENTKDRIKEAASVLPNM-GQGISQDASSSHYN---LHTPNAKNA 115
Query: 108 KDLICDAYGRCKHKIADAMGKAKDKAQEAIEKKKDIDGA-----------VADAVGKAKD 156
K+LICDAYG+CKH M KAKDKA E I+KK+DI + V DAV AK+
Sbjct: 116 KELICDAYGKCKH----VMEKAKDKASETIDKKRDIVNSNKEAVKEVGNNVVDAVDNAKE 171
Query: 157 TVYDKA-----------KETVEKGMDTGQTMKDHVVRNVSQATHTVKRFASTALGPLDSS 205
VYDKA K ++EKG + GQT K+HVV NV++A VK+F S ++ ++S
Sbjct: 172 RVYDKANDVYDNVQEYTKGSLEKGKEMGQTFKEHVVHNVTEAKDGVKKFMSLSMERVES- 230
Query: 206 VMGVANLLGFATAYGMCVWITFISSYVLSKAMPRQQFVVVQSKIYPVYFRAMAYTVGIAL 265
+M + NLLGF++ YGM VWITF+SSYVLS+ MPRQQF VVQSKIYPVYFRAM Y + +AL
Sbjct: 231 LMSLLNLLGFSSGYGMNVWITFVSSYVLSRVMPRQQFAVVQSKIYPVYFRAMGYCLLVAL 290
Query: 266 LGHVLGH--RNTLFTSKPQMLQAYNLLASLLTIFFNSLYLEPRATKVMFERMKLEKEEGR 323
LGHV GH RN + ++Q++NLLASLLT+F NS+YLEPRATK+MFERMK+EKEEGR
Sbjct: 291 LGHVFGHGMRN---NNGGGVMQSWNLLASLLTVFVNSVYLEPRATKLMFERMKIEKEEGR 347
Query: 324 GREDISG-----------STQEHERXXXXXXXXXXXXXAVLSPAQGHDAVGSRMIKLNNK 372
GRED++ ++ + ++ + + DAV ++++KLNNK
Sbjct: 348 GREDVTTTTERSRTEEHQNSPDPKKTSTTTTVAAEGTESQTQRKEHDDAVRAKIMKLNNK 407
Query: 373 LKRXXXXXXXXXXXXXXXXTWHLVYLAQRVHSAC 406
LK+ TWHLVYLAQ VH +C
Sbjct: 408 LKKLNSYSSFLNILNLMSLTWHLVYLAQNVHQSC 441
>Medtr4g033230.1 | late embryogenesis abundant protein (LEA) family
protein | HC | chr4:11593316-11590692 | 20130731
Length = 441
Score = 372 bits (956), Expect = e-103, Method: Compositional matrix adjust.
Identities = 222/454 (48%), Positives = 284/454 (62%), Gaps = 61/454 (13%)
Query: 1 MMNXXXXXXXXXXXXXXXMFSPTPPKQGANTIVKEGHRVVVVEYDQDGHQNTKISISPPE 60
MMN +FSP P KQ NTIVKEGH+VVVVEYDQDG+QNTKISI P +
Sbjct: 1 MMNLLALSLFITSLTTASIFSPNP-KQQPNTIVKEGHKVVVVEYDQDGYQNTKISILPEQ 59
Query: 61 P-----DHS--DSNLLDNARDKIKEAASVFPNMPGTGMA-GSSSSHSQDAFLHAP----- 107
D++ DS ++N +D+IKEAASV PNM G G++ +SSSH LH P
Sbjct: 60 QQTHQQDYTNMDSGFIENTKDRIKEAASVLPNM-GQGISQDASSSHYN---LHTPNAKNA 115
Query: 108 KDLICDAYGRCKHKIADAMGKAKDKAQEAIEKKKDIDGA-----------VADAVGKAKD 156
K+LICDAYG+CKH M KAKDKA E I+KK+DI + V DAV AK+
Sbjct: 116 KELICDAYGKCKH----VMEKAKDKASETIDKKRDIVNSNKEAVKEVGNNVVDAVDNAKE 171
Query: 157 TVYDKA-----------KETVEKGMDTGQTMKDHVVRNVSQATHTVKRFASTALGPLDSS 205
VYDKA K ++EKG + GQT K+HVV NV++A VK+F S ++ ++S
Sbjct: 172 RVYDKANDVYDNVQEYTKGSLEKGKEMGQTFKEHVVHNVTEAKDGVKKFMSLSMERVES- 230
Query: 206 VMGVANLLGFATAYGMCVWITFISSYVLSKAMPRQQFVVVQSKIYPVYFRAMAYTVGIAL 265
+M + NLLGF++ YGM VWITF+SSYVLS+ MPRQQF VVQSKIYPVYFRAM Y + +AL
Sbjct: 231 LMSLLNLLGFSSGYGMNVWITFVSSYVLSRVMPRQQFAVVQSKIYPVYFRAMGYCLLVAL 290
Query: 266 LGHVLGH--RNTLFTSKPQMLQAYNLLASLLTIFFNSLYLEPRATKVMFERMKLEKEEGR 323
LGHV GH RN + ++Q++NLLASLLT+F NS+YLEPRATK+MFERMK+EKEEGR
Sbjct: 291 LGHVFGHGMRN---NNGGGVMQSWNLLASLLTVFVNSVYLEPRATKLMFERMKIEKEEGR 347
Query: 324 GREDISG-----------STQEHERXXXXXXXXXXXXXAVLSPAQGHDAVGSRMIKLNNK 372
GRED++ ++ + ++ + + DAV ++++KLNNK
Sbjct: 348 GREDVTTTTERSRTEEHQNSPDPKKTSTTTTVAAEGTESQTQRKEHDDAVRAKIMKLNNK 407
Query: 373 LKRXXXXXXXXXXXXXXXXTWHLVYLAQRVHSAC 406
LK+ TWHLVYLAQ VH +C
Sbjct: 408 LKKLNSYSSFLNILNLMSLTWHLVYLAQNVHQSC 441
>Medtr1g087320.1 | late embryogenesis abundant protein (LEA) family
protein | HC | chr1:39137551-39141656 | 20130731
Length = 208
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 68/125 (54%), Gaps = 5/125 (4%)
Query: 204 SSVMGVANLLGFATAYGMCVWITFISSYVLSKAMPRQQFVVVQSKIYPVYFR--AMAYTV 261
S+ + +A+LLGF+ A+G +W+TFI ++ K +PR QF +QSK++P YF + V
Sbjct: 33 STYIKLAHLLGFSIAFGAALWVTFIGGIIMFKNLPRHQFGNLQSKMFPAYFSMVGVCIAV 92
Query: 262 GIALLGHVLGHRNTLFTSKPQMLQAYNLLASLLTIFFNSLYLEPRATKVMFERMKLEKEE 321
+A G++ + +S Q Q L+++L N P ++M +R K+E+E
Sbjct: 93 TVASFGYLHPWKT---SSTSQRYQLGFLISALAFNLTNLFVFTPMTIEMMKQRHKVEREN 149
Query: 322 GRGRE 326
G E
Sbjct: 150 SIGEE 154