Miyakogusa Predicted Gene

Lj3g3v3752250.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3752250.1 Non Characterized Hit- tr|F7GKG0|F7GKG0_MONDO
Uncharacterized protein OS=Monodelphis domestica
GN=PR,36,0.00000000004,FAMILY NOT NAMED,NULL; seg,NULL,CUFF.46309.1
         (325 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g035250.1 | hypothetical protein | HC | chr4:12087672-1207...   306   1e-83

>Medtr4g035250.1 | hypothetical protein | HC |
           chr4:12087672-12078303 | 20130731
          Length = 391

 Score =  306 bits (785), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 179/331 (54%), Positives = 207/331 (62%), Gaps = 60/331 (18%)

Query: 6   GAFAPTHQEPYIRTRENLYFDGLLRPLKPQAGANSSNILISVSESGEKEFVSNMSAEV-- 63
           GA  P +QEPYIRTREN +FDGLL                   E+  K  V++MS EV  
Sbjct: 5   GALTP-NQEPYIRTRENPFFDGLLSK--------------DSDETKTKNLVTDMSKEVIE 49

Query: 64  ---------FDHNDLS-EHSSSERWLETSTIAPFIQLDIQSGLNEVANLRSGQCHSPKTP 113
                    FD N  S +HSSSE+WL+TS IAPFIQLDIQS                   
Sbjct: 50  LSPLDNSAIFDLNFESFDHSSSEKWLKTSNIAPFIQLDIQS------------------- 90

Query: 114 QVDEEHQALQSPAILNTEKTYTVTRRKEKXXXXXXXXXXXXYYNGVSPEMEIVESCESID 173
             +EE     S  I + EK YT+TRR EK            +YNGVSP+MEIVESCESID
Sbjct: 91  --NEEFS--HSSEIQHMEKIYTITRRNEKLSNVLLPLSAASFYNGVSPKMEIVESCESID 146

Query: 174 KLNAYLKARKDDVNAGVPGKFLHAVMSSDGADVGTVASVIMYSFYLNVTLKSQQLCTVPV 233
           KLNAYLKARKDDV+AGVPGKFLHA++ SD ADVGT+AS IMYSFYLN  L S  +  +  
Sbjct: 147 KLNAYLKARKDDVSAGVPGKFLHAIIGSDDADVGTIASTIMYSFYLNYQL-STSIDQILA 205

Query: 234 ININRTNLGSHAELKWLLDSCRIDQSSLIFADEIDLSYYELFGSLKIVLLKSSRMASKQE 293
             +N +    H +L             LIFADEIDLSYY+LFGSLKI+LLKSS++A+KQE
Sbjct: 206 HMLNSSGCLIHVKLI---------NHPLIFADEIDLSYYDLFGSLKILLLKSSKIANKQE 256

Query: 294 KLKQAVVEVFHCRKGETTYPWVKTVTTGEVS 324
           KLKQAVVE+FHCRKGET YPWVK VTTGE S
Sbjct: 257 KLKQAVVEIFHCRKGETIYPWVKNVTTGEES 287