Miyakogusa Predicted Gene

Lj3g3v3752070.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3752070.2 tr|G7LBJ9|G7LBJ9_MEDTR Malate dehydrogenase
OS=Medicago truncatula GN=MTR_8g005980 PE=3 SV=1,88.11,0,MDH,Malate
dehydrogenase, active site; SUBFAMILY NOT NAMED,NULL; MALATE
DEHYDROGENASE,Malate dehydro,CUFF.46295.2
         (371 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g005980.1 | cytoplasmic-like malate dehydrogenase | HC | c...   630   0.0  
Medtr1g043040.1 | cytoplasmic-like malate dehydrogenase | HC | c...   534   e-152
Medtr1g076130.1 | cytoplasmic-like malate dehydrogenase | HC | c...   526   e-149
Medtr1g090730.1 | NADP-dependent malate dehydrogenase | HC | chr...   236   4e-62
Medtr1g090730.2 | NADP-dependent malate dehydrogenase | HC | chr...   208   7e-54
Medtr7g037650.1 | enoyl-acyl-carrier reductase | LC | chr7:13884...    78   1e-14

>Medtr8g005980.1 | cytoplasmic-like malate dehydrogenase | HC |
           chr8:430275-432634 | 20130731
          Length = 413

 Score =  630 bits (1626), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 304/370 (82%), Positives = 325/370 (87%)

Query: 1   MKMFTWEIVDHTILKKLLVVLLCAFLFWKIIRYMCGLLKVEKEPVTVLVTGAAGQIGYAL 60
           M+MF  +I+D T+L+K+++VL+C FLFWKIIRYM  LLKVEKEPVTVLVTGAAGQIGYAL
Sbjct: 44  MEMFGLDIMDKTVLQKIVLVLVCTFLFWKIIRYMSDLLKVEKEPVTVLVTGAAGQIGYAL 103

Query: 61  VPMIARGMMLGPNQPVFLHMLDIEPAAEALKGVKMELTDAAFPLLKGVVATTDVVEACKD 120
           VPMIARGMMLGPNQPV LHMLDIEPA EALKGVKMEL DAAFPLL+GVVATTDVVEACKD
Sbjct: 104 VPMIARGMMLGPNQPVILHMLDIEPALEALKGVKMELIDAAFPLLRGVVATTDVVEACKD 163

Query: 121 VNIAIMVGGFPRKEGMERKDVMSKNVSIYKXXXXXXXXXXXXDCKVLVVANPANTNALIL 180
           VNIA+MVGGFPRKEGMERKDVMSKNVSIYK             CKVLV+ANPANTNALIL
Sbjct: 164 VNIAVMVGGFPRKEGMERKDVMSKNVSIYKTQASALEEHAAAYCKVLVIANPANTNALIL 223

Query: 181 KEFAPSIPAKNITCLTRLDHNRALGQISERINVHVSDVKNVIIWGNHSSTQYPDVNHATI 240
           KEFAPSIP KNITCLTRLDHNRALGQISE++NV VSDVKNVIIWGNHSSTQYPDVNHAT+
Sbjct: 224 KEFAPSIPEKNITCLTRLDHNRALGQISEKLNVDVSDVKNVIIWGNHSSTQYPDVNHATV 283

Query: 241 TTSGGMKPVRDLIADHNWLNTEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLG 300
            TS G K VR+L+AD NWLN+EFITTVQQRG AIIKARK           CDHI DWVLG
Sbjct: 284 ATSNGKKHVRELVADDNWLNSEFITTVQQRGGAIIKARKLSSALSAASAACDHIHDWVLG 343

Query: 301 TPKGTWVSMGVCSDGSYGIQPGLIYSFPVTCEKGEWNIVQGLKIDQFSRDKMDKTAQELI 360
           TPKGTWVSMGV SDGSYGIQPGLIYSFPVTC+KGEWNIVQGLKID+FSR+KMDKTAQELI
Sbjct: 344 TPKGTWVSMGVYSDGSYGIQPGLIYSFPVTCDKGEWNIVQGLKIDEFSREKMDKTAQELI 403

Query: 361 EEKTLAKSCL 370
           EEK LA SCL
Sbjct: 404 EEKALANSCL 413


>Medtr1g043040.1 | cytoplasmic-like malate dehydrogenase | HC |
           chr1:16122538-16117304 | 20130731
          Length = 332

 Score =  534 bits (1375), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 257/330 (77%), Positives = 278/330 (84%)

Query: 42  KEPVTVLVTGAAGQIGYALVPMIARGMMLGPNQPVFLHMLDIEPAAEALKGVKMELTDAA 101
           K+PV VLVTGAAGQIGYALVPMIARG+MLGP+QPV LHMLDI PAAE+L GVKMEL DAA
Sbjct: 3   KDPVRVLVTGAAGQIGYALVPMIARGVMLGPDQPVILHMLDIAPAAESLNGVKMELVDAA 62

Query: 102 FPLLKGVVATTDVVEACKDVNIAIMVGGFPRKEGMERKDVMSKNVSIYKXXXXXXXXXXX 161
           FPLLKGVVATTDVVEAC  VNIA+MVGGFPRKEGMERKDVMSKNVSIYK           
Sbjct: 63  FPLLKGVVATTDVVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKSQASALEKHAA 122

Query: 162 XDCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISERINVHVSDVKNV 221
            +CKVLVVANPANTNALILKEFAPSIP +NI+CLTRLDHNRALGQISER+NV VSDVKNV
Sbjct: 123 ANCKVLVVANPANTNALILKEFAPSIPERNISCLTRLDHNRALGQISERLNVQVSDVKNV 182

Query: 222 IIWGNHSSTQYPDVNHATITTSGGMKPVRDLIADHNWLNTEFITTVQQRGAAIIKARKXX 281
           IIWGNHSSTQYPDVNHAT+ T  G KPVR+L++D  WLN EFI+TVQQRGAAIIKARK  
Sbjct: 183 IIWGNHSSTQYPDVNHATVNTPAGEKPVRELVSDDAWLNGEFISTVQQRGAAIIKARKLS 242

Query: 282 XXXXXXXXXCDHIRDWVLGTPKGTWVSMGVCSDGSYGIQPGLIYSFPVTCEKGEWNIVQG 341
                    CDHIRDWVLGTP+GT+VSMGV SDGSY +  GLIYSFPVTC  GEW IVQG
Sbjct: 243 SALSAASAACDHIRDWVLGTPQGTFVSMGVYSDGSYNVPSGLIYSFPVTCANGEWKIVQG 302

Query: 342 LKIDQFSRDKMDKTAQELIEEKTLAKSCLN 371
           L ID+FSR K+D TA+EL EEK LA SCL+
Sbjct: 303 LSIDEFSRKKLDLTAEELSEEKNLAYSCLS 332


>Medtr1g076130.1 | cytoplasmic-like malate dehydrogenase | HC |
           chr1:33721743-33725370 | 20130731
          Length = 332

 Score =  526 bits (1354), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 254/330 (76%), Positives = 274/330 (83%)

Query: 42  KEPVTVLVTGAAGQIGYALVPMIARGMMLGPNQPVFLHMLDIEPAAEALKGVKMELTDAA 101
           K+PV VLVTGAAGQIGYALVPMIARG+MLGP+QPV LHMLDI PAAE+L GVKMEL DAA
Sbjct: 3   KDPVRVLVTGAAGQIGYALVPMIARGVMLGPDQPVILHMLDIPPAAESLNGVKMELVDAA 62

Query: 102 FPLLKGVVATTDVVEACKDVNIAIMVGGFPRKEGMERKDVMSKNVSIYKXXXXXXXXXXX 161
           FPLLKGVVATTDVVE C  VNIA+MVGGFPRKEGMERKDVM+KNVSIYK           
Sbjct: 63  FPLLKGVVATTDVVEGCTGVNIAVMVGGFPRKEGMERKDVMTKNVSIYKSQASALEKHAA 122

Query: 162 XDCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISERINVHVSDVKNV 221
            +CKVLVVANPANTNALILKEFAPSIP KNI+CLTRLDHNRALGQISER+NV VS+VKNV
Sbjct: 123 ANCKVLVVANPANTNALILKEFAPSIPEKNISCLTRLDHNRALGQISERLNVEVSNVKNV 182

Query: 222 IIWGNHSSTQYPDVNHATITTSGGMKPVRDLIADHNWLNTEFITTVQQRGAAIIKARKXX 281
           IIWGNHSS+QYPDVNHAT+  S   KPVR+L+AD  WLN EFI TVQQRGAAIIKARK  
Sbjct: 183 IIWGNHSSSQYPDVNHATVKISSAEKPVRELVADDAWLNGEFIATVQQRGAAIIKARKLS 242

Query: 282 XXXXXXXXXCDHIRDWVLGTPKGTWVSMGVCSDGSYGIQPGLIYSFPVTCEKGEWNIVQG 341
                    CDHIRDWVLGTP+GTWVSMGV SDGSY +  GLIYSFPVT   GEW IVQG
Sbjct: 243 SALSAASAACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTTRNGEWQIVQG 302

Query: 342 LKIDQFSRDKMDKTAQELIEEKTLAKSCLN 371
           L ID+FSR K+D TA+EL EEK LA SCL+
Sbjct: 303 LSIDEFSRKKLDLTAEELSEEKALAYSCLS 332


>Medtr1g090730.1 | NADP-dependent malate dehydrogenase | HC |
           chr1:40748776-40743707 | 20130731
          Length = 437

 Score =  236 bits (601), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 130/324 (40%), Positives = 187/324 (57%), Gaps = 6/324 (1%)

Query: 42  KEPVTVLVTGAAGQIGYALVPMIARGMMLGPNQPVFLHMLDIEPAAEALKGVKMELTDAA 101
           K+ +T+ V+GAAG I   L+  +A G + GPNQPV L +L  E + +AL+GV MEL D+ 
Sbjct: 92  KKLITIAVSGAAGMISNHLLFKLASGEVFGPNQPVALKLLGSERSLQALEGVAMELEDSL 151

Query: 102 FPLLKGVVATTDVVEACKDVNIAIMVGGFPRKEGMERKDVMSKNVSIYKXXXXXXXXXXX 161
           FPLL+ V+ + D  E  +D + A+++G  PR  G+ER  ++  N  I+            
Sbjct: 152 FPLLREVIISIDPYEVFQDADWALLIGAKPRGPGVERAALLDINGQIFAEQGKALNAVAS 211

Query: 162 XDCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISERINVHVSDVKNV 221
            + KV+VV NP NTNALI  + AP+IPAKN   LTRLD NRA  Q++ +  V    V N+
Sbjct: 212 RNVKVIVVGNPCNTNALICLKNAPNIPAKNFHALTRLDENRAKCQLALKAGVFYDKVSNM 271

Query: 222 IIWGNHSSTQYPDVNHATITTSGGMKPVRDLIADHNWLNTEFITTVQQRGAAIIKARKXX 281
            IWGNHS+TQ PD  +A I    G+ PV+++I DH WL  EF   VQ+RG  +I+     
Sbjct: 272 TIWGNHSTTQVPDFLNARID---GL-PVKEVIKDHKWLEEEFTEKVQKRGGVLIQKWGRS 327

Query: 282 XXXXXXXXXCDHIRDWVLGTPKGTWVSMGVCSDGS-YGIQPGLIYSFPVTCE-KGEWNIV 339
                     D IR  +  TP+G W S GV + G+ YGI   +++S P   +  G++ +V
Sbjct: 328 SAASTSVSIVDAIRSLITPTPEGDWFSTGVYTSGNPYGIAEDIVFSMPCRSKGDGDYELV 387

Query: 340 QGLKIDQFSRDKMDKTAQELIEEK 363
           + +  D + R K+ KT  EL+ EK
Sbjct: 388 KDVIFDDYLRQKLAKTEAELLAEK 411


>Medtr1g090730.2 | NADP-dependent malate dehydrogenase | HC |
           chr1:40748575-40744691 | 20130731
          Length = 408

 Score =  208 bits (530), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 113/270 (41%), Positives = 156/270 (57%), Gaps = 4/270 (1%)

Query: 42  KEPVTVLVTGAAGQIGYALVPMIARGMMLGPNQPVFLHMLDIEPAAEALKGVKMELTDAA 101
           K+ +T+ V+GAAG I   L+  +A G + GPNQPV L +L  E + +AL+GV MEL D+ 
Sbjct: 92  KKLITIAVSGAAGMISNHLLFKLASGEVFGPNQPVALKLLGSERSLQALEGVAMELEDSL 151

Query: 102 FPLLKGVVATTDVVEACKDVNIAIMVGGFPRKEGMERKDVMSKNVSIYKXXXXXXXXXXX 161
           FPLL+ V+ + D  E  +D + A+++G  PR  G+ER  ++  N  I+            
Sbjct: 152 FPLLREVIISIDPYEVFQDADWALLIGAKPRGPGVERAALLDINGQIFAEQGKALNAVAS 211

Query: 162 XDCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISERINVHVSDVKNV 221
            + KV+VV NP NTNALI  + AP+IPAKN   LTRLD NRA  Q++ +  V    V N+
Sbjct: 212 RNVKVIVVGNPCNTNALICLKNAPNIPAKNFHALTRLDENRAKCQLALKAGVFYDKVSNM 271

Query: 222 IIWGNHSSTQYPDVNHATITTSGGMKPVRDLIADHNWLNTEFITTVQQRGAAIIKARKXX 281
            IWGNHS+TQ PD  +A I    G+ PV+++I DH WL  EF   VQ+RG  +I+     
Sbjct: 272 TIWGNHSTTQVPDFLNARI---DGL-PVKEVIKDHKWLEEEFTEKVQKRGGVLIQKWGRS 327

Query: 282 XXXXXXXXXCDHIRDWVLGTPKGTWVSMGV 311
                     D IR  +  TP+G W S GV
Sbjct: 328 SAASTSVSIVDAIRSLITPTPEGDWFSTGV 357


>Medtr7g037650.1 | enoyl-acyl-carrier reductase | LC |
          chr7:13884962-13883315 | 20130731
          Length = 532

 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 38/46 (82%), Positives = 38/46 (82%)

Query: 54 GQIGYALVPMIARGMMLGPNQPVFLHMLDIEPAAEALKGVKMELTD 99
          GQIG AL PMIARGMMLG NQ V LHMLDIEP  EALKGVKMEL D
Sbjct: 24 GQIGDALAPMIARGMMLGTNQHVILHMLDIEPTLEALKGVKMELID 69