Miyakogusa Predicted Gene

Lj3g3v3711280.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3711280.1 tr|D7M4Y3|D7M4Y3_ARALL A_IG002N01.11 protein
OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_49045,46.1,9e-18,no
description,BTB/POZ fold; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,CUFF.46366.1
         (251 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g028190.1 | BTB/POZ domain protein POB1 | HC | chr8:105286...   146   2e-35
Medtr8g028190.3 | BTB/POZ domain protein POB1 | HC | chr8:105286...   143   2e-34
Medtr8g028190.2 | BTB/POZ domain protein POB1 | HC | chr8:105286...   143   2e-34
Medtr4g088460.1 | BTB/POZ domain protein | LC | chr4:35082007-35...   103   2e-22

>Medtr8g028190.1 | BTB/POZ domain protein POB1 | HC |
           chr8:10528673-10524289 | 20130731
          Length = 551

 Score =  146 bits (368), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 110/267 (41%), Positives = 134/267 (50%), Gaps = 83/267 (31%)

Query: 1   MESDRPRGGESV----------FNVSDKFLRIEIMAD-------TATTFSIAGCSKRR-- 41
           MES+   GG S            N SD+ LRIEIMAD       +    SIA  ++ R  
Sbjct: 15  MESEWAHGGSSSDADFGFAFNDSNFSDRVLRIEIMADPVDPQPDSENCTSIADWARHRKR 74

Query: 42  -------------PKEQVMNVY------CSAA---------------------------- 54
                        P EQ++N        C A+                            
Sbjct: 75  RREDIKKENVGDLPDEQILNGNQPDMDDCVASENQEEEVVAMVEESPSGDEAVNDNDEPN 134

Query: 55  -----ASTTVVRVQTLRISSSILAAKTPSFSKLF-----DSKQRHYTLRINASEEAVLME 104
                +   VVRV+TL ISS ILAAK+P F KLF     +S+ RH TLRINASEEA LME
Sbjct: 135 LGMDYSEPAVVRVKTLHISSPILAAKSPFFYKLFSNGMRESELRHVTLRINASEEAALME 194

Query: 105 LLKFMCSDILEI-------DELLTADQFEVFGRMRQCCQRLQNSPMTLDSALFYLELPHT 157
           LL FM S+ L I       D L+ AD+FEV   MR C + L+N  MT +SAL YLELP +
Sbjct: 195 LLNFMYSNTLSIKTAPGLLDVLMAADKFEVASCMRYCSRLLRNMQMTPESALLYLELPSS 254

Query: 158 VRMADAIQPLTIAANKYLAAHYKDITR 184
           V MADA+QPLT AA +YLA+ YKDIT+
Sbjct: 255 VLMADAVQPLTDAAKQYLASRYKDITK 281


>Medtr8g028190.3 | BTB/POZ domain protein POB1 | HC |
           chr8:10528673-10524338 | 20130731
          Length = 559

 Score =  143 bits (360), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 83/142 (58%), Positives = 99/142 (69%), Gaps = 12/142 (8%)

Query: 55  ASTTVVRVQTLRISSSILAAKTPSFSKLF-----DSKQRHYTLRINASEEAVLMELLKFM 109
           +   VVRV+TL ISS ILAAK+P F KLF     +S+ RH TLRINASEEA LMELL FM
Sbjct: 148 SEPAVVRVKTLHISSPILAAKSPFFYKLFSNGMRESELRHVTLRINASEEAALMELLNFM 207

Query: 110 CSDILEI-------DELLTADQFEVFGRMRQCCQRLQNSPMTLDSALFYLELPHTVRMAD 162
            S+ L I       D L+ AD+FEV   MR C + L+N  MT +SAL YLELP +V MAD
Sbjct: 208 YSNTLSIKTAPGLLDVLMAADKFEVASCMRYCSRLLRNMQMTPESALLYLELPSSVLMAD 267

Query: 163 AIQPLTIAANKYLAAHYKDITR 184
           A+QPLT AA +YLA+ YKDIT+
Sbjct: 268 AVQPLTDAAKQYLASRYKDITK 289


>Medtr8g028190.2 | BTB/POZ domain protein POB1 | HC |
           chr8:10528628-10524338 | 20130731
          Length = 591

 Score =  143 bits (360), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 83/142 (58%), Positives = 99/142 (69%), Gaps = 12/142 (8%)

Query: 55  ASTTVVRVQTLRISSSILAAKTPSFSKLF-----DSKQRHYTLRINASEEAVLMELLKFM 109
           +   VVRV+TL ISS ILAAK+P F KLF     +S+ RH TLRINASEEA LMELL FM
Sbjct: 180 SEPAVVRVKTLHISSPILAAKSPFFYKLFSNGMRESELRHVTLRINASEEAALMELLNFM 239

Query: 110 CSDILEI-------DELLTADQFEVFGRMRQCCQRLQNSPMTLDSALFYLELPHTVRMAD 162
            S+ L I       D L+ AD+FEV   MR C + L+N  MT +SAL YLELP +V MAD
Sbjct: 240 YSNTLSIKTAPGLLDVLMAADKFEVASCMRYCSRLLRNMQMTPESALLYLELPSSVLMAD 299

Query: 163 AIQPLTIAANKYLAAHYKDITR 184
           A+QPLT AA +YLA+ YKDIT+
Sbjct: 300 AVQPLTDAAKQYLASRYKDITK 321


>Medtr4g088460.1 | BTB/POZ domain protein | LC |
           chr4:35082007-35083494 | 20130731
          Length = 362

 Score =  103 bits (257), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 62/127 (48%), Positives = 83/127 (65%), Gaps = 12/127 (9%)

Query: 56  STTVVRVQTLRISSSILAAKTPSFSKLF-----DSKQRHYTLRINASEEAVLMELLKFMC 110
           S+  V+V T++ISS+ILAAK+P F KLF     +S Q H TLRI ASEEA ++ LLKFM 
Sbjct: 54  SSIAVKVITMQISSAILAAKSPLFFKLFSNGMRESDQTHVTLRITASEEAPVIALLKFMN 113

Query: 111 SDILEI-------DELLTADQFEVFGRMRQCCQRLQNSPMTLDSALFYLELPHTVRMADA 163
           ++IL +       + L+ AD+FEV   +R C Q L +  MTL+  L YL+LP +V M D 
Sbjct: 114 TNILNVTSPLVFLEVLVAADKFEVASCLRHCNQLLLSISMTLEFVLPYLDLPSSVLMDDG 173

Query: 164 IQPLTIA 170
           +QPLT A
Sbjct: 174 VQPLTDA 180