Miyakogusa Predicted Gene

Lj3g3v3700150.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3700150.1 Non Characterized Hit- tr|I1LNV9|I1LNV9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.8818
PE=,58.27,0,seg,NULL; coiled-coil,NULL,CUFF.46356.1
         (490 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g037495.1 | hypothetical protein | HC | chr4:13798736-1379...   483   e-136

>Medtr4g037495.1 | hypothetical protein | HC |
           chr4:13798736-13794179 | 20130731
          Length = 827

 Score =  483 bits (1242), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 277/487 (56%), Positives = 332/487 (68%), Gaps = 40/487 (8%)

Query: 11  NWSSESNWTIASGTIPNCLTIQSSLSFTDDEQPTIESTXXXXXXXXXXXXXCEIKINFAG 70
           N++S++NWTI SGT+   LT QSSLS + D+     S              C+I INFA 
Sbjct: 9   NYTSQTNWTITSGTLNKTLTFQSSLSSSSDDDEESVSHPLLLHPPSPDSTPCQITINFAE 68

Query: 71  KHELRQVYIRSTARVYEIYCAPDLKTTGEYLCTVRCGVAVRDGDVLRCNLIESLPNRDSS 130
           KHE+RQ+Y+RSTARVYEIY      T  EYLCTVRCGVA RDG+VLR N I      + +
Sbjct: 69  KHEVRQIYVRSTARVYEIY------TNDEYLCTVRCGVATRDGEVLRSNEI-----GEEN 117

Query: 131 VKCEDDWVEVKVADTSDH---------ATQDLYEATAEIDDVDPCVSVTIRLLSLQSKGC 181
           V+ EDDWVEVK  D +           A QDL+EATAEI+D +PC+S+T+RLLSLQSKG 
Sbjct: 118 VRNEDDWVEVKADDANSQTKPNLNLTTAAQDLFEATAEINDANPCISLTLRLLSLQSKGS 177

Query: 182 VNVHEIYVFADPVDSETQETRNENSSSSSLMAMFLPTLMQLSKAKTGLGDLNAVRKEKQH 241
           V V EIYVF DPVDSE +E+ NEN S SSLMAMFLP+L+Q SK  TGL  L+AVRKEKQ 
Sbjct: 178 VCVDEIYVFGDPVDSEIEESHNENLSGSSLMAMFLPSLLQASKT-TGLSSLSAVRKEKQF 236

Query: 242 VSEDGLEENPCPSDSVIKTQLKGKASMSDPQEVKLKEVIEGS---SQPDIHTQVANMESG 298
           V +D L+E P PS  +I+ QL  + S+  P EV+LKEV  GS   SQ    +Q A MESG
Sbjct: 237 VLKDDLKETPQPSARIIENQLDEEDSIIRPHEVELKEVKGGSVGPSQSYTLSQAAKMESG 296

Query: 299 HAAVPLHAAKVDSSCSAVHSKIAEVVNNHSASTVPSQVAVTESNQGGFSGGGVERVLEQL 358
           HA VP  AA++DS+C A+ SK+AE+ NN  A  +PSQV +   NQG FSGG VER LE+L
Sbjct: 297 HA-VPSQAAQMDSNCRAIPSKVAEMENNRHA--IPSQVPI---NQGDFSGGNVERALEKL 350

Query: 359 VSRMDRLEQICLGFQEKMVMPMNSIETRLQRVEQQLDTLTQKLQSSASPSCYRISAPDAS 418
           +SRMDR+E+ICLGFQEKMV+PMNSIE RLQRVEQQL+TL+ K Q+S  PSCY+ISAPDAS
Sbjct: 351 MSRMDRIEEICLGFQEKMVVPMNSIEVRLQRVEQQLETLSMKRQNSELPSCYKISAPDAS 410

Query: 419 STESDDISCDIGLDDPAIREIESDNNYLHTEVSYVSPHD----------MSDLEYAPQIF 468
             ESD  SC+  LD     EIESD   LHTEV  VSP D          MS+ E   Q+ 
Sbjct: 411 FIESDTNSCENCLDCTVTGEIESDKKSLHTEVLNVSPQDVSPEDGCPENMSESESTTQLL 470

Query: 469 PGLVVTA 475
           PGLVVTA
Sbjct: 471 PGLVVTA 477