Miyakogusa Predicted Gene
- Lj3g3v3689940.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v3689940.1 Non Characterized Hit- tr|I1LNW6|I1LNW6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.2269
PE=,71.53,0,ARATH130DUF,Protein of unknown function DUF1423, plant;
seg,NULL; SUBFAMILY NOT NAMED,NULL; VERNALIZ,CUFF.46194.1
(1226 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g039650.1 | oberon-like protein | HC | chr4:14080849-14086... 1331 0.0
Medtr5g097360.1 | potyviral VPg interacting protein | HC | chr5:... 286 8e-77
Medtr4g127880.4 | protein vernalization insensitive-like protein... 55 3e-07
Medtr4g127880.3 | protein vernalization insensitive-like protein... 55 3e-07
Medtr4g127880.1 | protein vernalization insensitive-like protein... 55 3e-07
Medtr5g006390.1 | CDPK adapter protein, putative | HC | chr5:891... 53 2e-06
Medtr6g085190.1 | protein vernalization insensitive-like protein... 52 4e-06
>Medtr4g039650.1 | oberon-like protein | HC | chr4:14080849-14086502 |
20130731
Length = 1236
Score = 1331 bits (3445), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 672/941 (71%), Positives = 767/941 (81%), Gaps = 25/941 (2%)
Query: 295 APED-ATGSEVQDSVPMETDEKQVQENECHPNDRNTGMDERQELPSEEEVKPNEGIDSEV 353
AP+D A GSE+Q + E + Q ++NECH D + M+E+Q L S+EE K + IDSEV
Sbjct: 312 APKDEAAGSEIQQTS--EDKQAQKKKNECHSGDADVVMEEKQTLSSKEEAKCTQDIDSEV 369
Query: 354 KNAEKGADEQPDIQNDPSKEMLVTGTELDNDGNEAEKKDVCLNADVAQCKEDAGKGSETE 413
K A K E P Q+DP+ E+ V +E+ N +KK+VCLN D +CKE+ KG++
Sbjct: 370 KVAGKEVCELPKTQDDPTNEISVAESEIGTTSNVDDKKNVCLNGDDTRCKEEMEKGTDKG 429
Query: 414 KILVNEEEHKQDKGADLATSTGVDKPELNDEVTKENEVPKEVNRGVVMESVTN-SNAKDK 472
K ++NEEE ++D G G +KPE + E + EN+V EV +G MESV+ +N KDK
Sbjct: 430 KAMLNEEEREEDNG------VGGNKPE-SIEGSTENDVADEV-KGETMESVSVINNVKDK 481
Query: 473 GKRVSAAPAVDAHSLEDGLWIDRGSRDIATCSVDVMEGPSTRGFELFSRSPVRK-EKPDL 531
GK +S P V AHS +DGLWIDRGS D+ATC VD MEGPS RGFELFS SPVRK EK D
Sbjct: 482 GKSISVTPDV-AHSSKDGLWIDRGSNDLATCPVDDMEGPSRRGFELFSTSPVRKAEKSDS 540
Query: 532 SVLNKQKDDSLAMGQLDLTLSLPNVLLPIGAPETTTQGPGSPSQARSVQSLSNTFCTNSD 591
VL K+ DDSLAMGQLDL+LSLPNVLLPIGA ET TQ PGSPSQARSVQSLSNTFCTNSD
Sbjct: 541 LVLKKENDDSLAMGQLDLSLSLPNVLLPIGAQETATQAPGSPSQARSVQSLSNTFCTNSD 600
Query: 592 GFTASMSFSGSQSLYHNPSCSLTKNNSVDYEQSVG----SRPLFSQGF-WQAQAQ-SDTK 645
GFTASMSFSGSQSLYHNPSCSLTKN SVDYEQSVG SRPLF QGF WQA +Q D K
Sbjct: 601 GFTASMSFSGSQSLYHNPSCSLTKN-SVDYEQSVGKSVGSRPLF-QGFDWQALSQQGDPK 658
Query: 646 QKEVPLGQRASVNGNGSFYQPQASWSVLEGQVVKGQHLMVLEGSTKMSGGIDRQLSFHKQ 705
QKEVP QR S+NGNGS YQPQASW VL+ Q +KGQH LEGS+KM G+++QLSFHKQ
Sbjct: 659 QKEVPSSQRTSMNGNGSLYQPQASWGVLDTQALKGQHSRALEGSSKMGSGLEKQLSFHKQ 718
Query: 706 LTGQSRRHDDVRSPSQSVGSHDIGSNYSYEKKREVRDRGSGSLYRTTSLKQKEQLLIGGS 765
++GQSRRHDDVRSP+QSVGSHD GSNYS+EKKRE R SG L+RTTS K +EQLL+GG
Sbjct: 719 ISGQSRRHDDVRSPTQSVGSHDNGSNYSFEKKRE---RSSGGLHRTTSQKGQEQLLMGGL 775
Query: 766 DFVETIIAKIVSEPVHALSRKFHEMNGQSIAGLKEGIREIMLNTDKRGQILAFQKVLQNR 825
DFV+TIIA+I+SE V +SRKFHEM+GQ + +KEGIRE+MLN D GQILAFQK+LQNR
Sbjct: 776 DFVKTIIARIISESVPVMSRKFHEMSGQYMTHMKEGIRELMLNADSHGQILAFQKILQNR 835
Query: 826 SDITLDDLLKCHRVQLEILVALKTGLTQFXXXXXXXXXXXXAQVFVNLRCRNLSCRSQLP 885
SDITLD L+KCHRVQLEILVA+KTGL + AQVF+NL+CRN+SCRSQLP
Sbjct: 836 SDITLDVLVKCHRVQLEILVAIKTGLAHYLHLGDNISSNDLAQVFLNLKCRNVSCRSQLP 895
Query: 886 VDECDCKVCVQKNGFCRECMCLVCSKFDNASNTCSWVGCDVCLHWCHTDCGLRESYIRNG 945
VDECDCK+CVQKNGFCRECMCLVCSKFDNASNT SWVGCDVCLHWCHTDCGLRESYIRNG
Sbjct: 896 VDECDCKLCVQKNGFCRECMCLVCSKFDNASNTVSWVGCDVCLHWCHTDCGLRESYIRNG 955
Query: 946 HSTTGTKGMTEMQFHCIACDHPSEMFGFVKEVFQNFAKDWSAETLCKELEYVKRIFAASK 1005
+STTGTKG TEMQFHCIACDHPSEMFGFVKEVFQNFAK+WSAE L KELEYVKRIF+ASK
Sbjct: 956 NSTTGTKGTTEMQFHCIACDHPSEMFGFVKEVFQNFAKEWSAEYLYKELEYVKRIFSASK 1015
Query: 1006 DIRGRQLHEIADQMLTRLVIKSSLPEVLRHIMSFLSDSDSSKLAMTTSFSGKEHVTENNG 1065
DIRGRQLHEIADQML RL IKS+LPEVLR IMSFLSD DSSKLAMTT+FSGKE EN+
Sbjct: 1016 DIRGRQLHEIADQMLPRLTIKSNLPEVLRRIMSFLSDCDSSKLAMTTNFSGKEQGKENSV 1075
Query: 1066 IAGPSQEVSWRKSIYAEKPPLLERPANILPSFDQNDKRSLAQEFQMSIVQKDFQFDELES 1125
+AGPSQE +W KSIY++K PLLERPA+ILP FDQNDKR++ QE Q+S VQKDF FDEL+S
Sbjct: 1076 VAGPSQEAAWLKSIYSDKAPLLERPASILPRFDQNDKRTMVQELQLSSVQKDFGFDELDS 1135
Query: 1126 IVKIKQAEAKMFQSRSDDARREAEGLKRISLAKSEKIEEEYNNRLAKLRLVETDEMRKQK 1185
I+KIK AEAKMFQ+R+DDARREAEGLKRI+LAK+EKIEEEY NR+ KLR ETDEMRK+K
Sbjct: 1136 IIKIKHAEAKMFQTRADDARREAEGLKRIALAKNEKIEEEYVNRITKLRFTETDEMRKRK 1195
Query: 1186 VEELQALERAHLEYLHMKNRMESDIKDLLSKMEATKMSLAM 1226
+EEL LERAH EYL+MK RMES+IKDLLSKMEATKM+LAM
Sbjct: 1196 LEELHGLERAHREYLNMKMRMESEIKDLLSKMEATKMNLAM 1236
Score = 114 bits (286), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 73/94 (77%), Positives = 75/94 (79%), Gaps = 3/94 (3%)
Query: 120 LIHRSESFCG--RREFPKGFRSERDRPRREGSVSSWRRGLKDFDESGARGSGRVGVAEER 177
LIHRSESFCG RREFPKGFRSERDR RREGSVSSWRRGLKDFDES G V EER
Sbjct: 152 LIHRSESFCGGSRREFPKGFRSERDRSRREGSVSSWRRGLKDFDESSRGSGGGSRV-EER 210
Query: 178 AVRSPKGLRDAVKSPTWSRDSESEQSKKRYSSSP 211
VRSPKG VKSP+WS+DSESEQSKKR S SP
Sbjct: 211 VVRSPKGFSRDVKSPSWSKDSESEQSKKRNSESP 244
Score = 93.2 bits (230), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/87 (62%), Positives = 61/87 (70%), Gaps = 8/87 (9%)
Query: 1 MKRLRSSDDLDSYG----GEKNACKDS-NLNRTIXXXXXQRSFYYKSDGVRKGLLXXXXX 55
MKRLRSS+DL SYG G+KN KDS NLNR+ QRSFYYK + VRK L+
Sbjct: 1 MKRLRSSEDLHSYGEKNGGDKNGVKDSSNLNRSFSSTG-QRSFYYKQENVRKSLISSSSS 59
Query: 56 XXXRYDRDRAVEEDREGSRMVRKRSEH 82
RY+RDR VEEDREGSR+VRKRSEH
Sbjct: 60 S--RYERDRTVEEDREGSRLVRKRSEH 84
>Medtr5g097360.1 | potyviral VPg interacting protein | HC |
chr5:42645832-42649703 | 20130731
Length = 565
Score = 286 bits (732), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 166/434 (38%), Positives = 244/434 (56%), Gaps = 12/434 (2%)
Query: 775 IVSEPVHALSRKFHEMNGQSIAGLKEGIREIMLNTD---KRGQILAFQKVLQNRSDITLD 831
I E V + K + G+ + LK G+R I+ + R + QK++Q+RSD+T
Sbjct: 92 IARERVDVIHEKMLRLPGEFLEELKTGLRVILEGGNGMQHRDEFFILQKLVQSRSDLTAK 151
Query: 832 DLLKCHRVQLEILVALKTGLTQFXXXXXXXXXXXXAQVFVNLRCRNLSCRSQLPVDECDC 891
L++ HRVQLEILVA+ TG+ F ++F+ RCRN++C++QLP D+C C
Sbjct: 152 TLIRAHRVQLEILVAINTGIQGFLHPNISLSQPSLIEIFLYKRCRNIACQNQLPADDCSC 211
Query: 892 KVCVQKNGFCRECMCLVCSKFDNASNTCSWVGCDVCLHWCHTDCGLRESYIRNGHSTTGT 951
+ C +GFC CMC +CSKFD NTC W+GCD+C HW HTDC +RE I G
Sbjct: 212 ETCTNNSGFCNLCMCTICSKFDFEVNTCRWIGCDLCSHWTHTDCAIREQLICMGPPVKSG 271
Query: 952 KGMTEMQFHCIACDHPSEMFGFVKEVFQNFAKDWSAETLCKELEYVKRIFAASKDIRGRQ 1011
G +EM F C +C SE+ G+VK+VFQ+ A W ++L +EL++V RIF SKD RG
Sbjct: 272 SGPSEMVFRCQSCSRTSELLGWVKDVFQHCAPSWDGDSLMRELDFVSRIFHGSKDHRGMN 331
Query: 1012 LHEIADQMLTRLVI-KSSLPEVLRHIMSFLS--DSDSSKLAMTTSFSGKEHVTEN--NGI 1066
L D + +L K R I++ D DS K ++ SG+ + N I
Sbjct: 332 LFWKCDDLKEKLKSRKMEAKAACRAILTVFQELDLDSPK-SLENVESGRLIAPQEACNRI 390
Query: 1067 AGPSQEVSWRKSIYA-EKPPLLERPANILPSFDQN--DKRSLAQEFQMSIVQKDFQFDEL 1123
A QE + A EK + ++ L + D+ DK A+E +M +K Q +EL
Sbjct: 391 AEVVQEAIRKMEFVADEKMRMFKKARLALEACDRELADKAREAEELKMERQKKKSQIEEL 450
Query: 1124 ESIVKIKQAEAKMFQSRSDDARREAEGLKRISLAKSEKIEEEYNNRLAKLRLVETDEMRK 1183
E IV++K AEA MFQ ++++A+REAE L+RI+LAKS+K EEEY + K +L E + ++
Sbjct: 451 ERIVRLKNAEADMFQLKANEAKREAERLQRIALAKSDKSEEEYTSNYLKQKLSEAEAEKQ 510
Query: 1184 QKVEELQALERAHL 1197
E+++ E + L
Sbjct: 511 YLYEKIKLQESSRL 524
>Medtr4g127880.4 | protein vernalization insensitive-like protein | HC
| chr4:53199551-53194200 | 20130731
Length = 710
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 72/158 (45%), Gaps = 24/158 (15%)
Query: 875 CRNLSCRSQLPVDECDCKVCVQKNGFCRECMCLVCSKFDNASNTCSWVGCD--------V 926
C+N +C++ L Q + FC+ C C +C ++D+ + W+ C
Sbjct: 122 CKNSACKATLN----------QGDAFCKRCSCCICHQYDDNKDPSLWLICSSEAPFPGVS 171
Query: 927 CLHWCHTDCGLRESYIRNGHSTTGTKGMTEMQFHCIACDHPSEMFGFVKEVFQNFAKDW- 985
C CH +C L+ +G G + + F+C++C +++ G ++ AKD
Sbjct: 172 CGLSCHLECALKHD--GSGIGKDGKRPKHDGGFYCVSCGKVNDLLGCWRKQLM-VAKDAR 228
Query: 986 SAETLCKELEYVKRIFAASKDIRGRQLHEIADQMLTRL 1023
+ LC + +++ ++ R+L+EI D+ + +L
Sbjct: 229 RVDILCYRVSLSQKLLQGTEMY--RELYEIVDEAVKKL 264
>Medtr4g127880.3 | protein vernalization insensitive-like protein | HC
| chr4:53199551-53194200 | 20130731
Length = 710
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 72/158 (45%), Gaps = 24/158 (15%)
Query: 875 CRNLSCRSQLPVDECDCKVCVQKNGFCRECMCLVCSKFDNASNTCSWVGCD--------V 926
C+N +C++ L Q + FC+ C C +C ++D+ + W+ C
Sbjct: 122 CKNSACKATLN----------QGDAFCKRCSCCICHQYDDNKDPSLWLICSSEAPFPGVS 171
Query: 927 CLHWCHTDCGLRESYIRNGHSTTGTKGMTEMQFHCIACDHPSEMFGFVKEVFQNFAKDW- 985
C CH +C L+ +G G + + F+C++C +++ G ++ AKD
Sbjct: 172 CGLSCHLECALKHD--GSGIGKDGKRPKHDGGFYCVSCGKVNDLLGCWRKQLM-VAKDAR 228
Query: 986 SAETLCKELEYVKRIFAASKDIRGRQLHEIADQMLTRL 1023
+ LC + +++ ++ R+L+EI D+ + +L
Sbjct: 229 RVDILCYRVSLSQKLLQGTEMY--RELYEIVDEAVKKL 264
>Medtr4g127880.1 | protein vernalization insensitive-like protein | HC
| chr4:53200104-53194200 | 20130731
Length = 730
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 73/158 (46%), Gaps = 24/158 (15%)
Query: 875 CRNLSCRSQLPVDECDCKVCVQKNGFCRECMCLVCSKFDNASNTCSWVGCD--------V 926
C+N +C++ L Q + FC+ C C +C ++D+ + W+ C
Sbjct: 142 CKNSACKATLN----------QGDAFCKRCSCCICHQYDDNKDPSLWLICSSEAPFPGVS 191
Query: 927 CLHWCHTDCGLRESYIRNGHSTTGTKGMTEMQFHCIACDHPSEMFGFVKEVFQNFAKDW- 985
C CH +C L+ + +G G + + F+C++C +++ G ++ AKD
Sbjct: 192 CGLSCHLECALK--HDGSGIGKDGKRPKHDGGFYCVSCGKVNDLLGCWRKQLM-VAKDAR 248
Query: 986 SAETLCKELEYVKRIFAASKDIRGRQLHEIADQMLTRL 1023
+ LC + +++ ++ R+L+EI D+ + +L
Sbjct: 249 RVDILCYRVSLSQKLLQGTE--MYRELYEIVDEAVKKL 284
>Medtr5g006390.1 | CDPK adapter protein, putative | HC |
chr5:891472-894633 | 20130731
Length = 469
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 64/141 (45%), Gaps = 12/141 (8%)
Query: 891 CKVCVQKNGFCRECMCLVCSKFDNAS-NTCSWVGCDV------CLHWCHTDCGLRESYIR 943
C +C ++GFCR+C C++C K N++ S++ C V C H H +C LR
Sbjct: 175 CDICCSESGFCRDCSCILCCKTVNSTLGGYSYIKCGVNVGEGICGHVAHVECALRSLLA- 233
Query: 944 NGHSTTGTKGMTEMQFHCIACDHPSEMFGFVKEVFQNF-AKDWSAETLCKELEYVKRIFA 1002
T G + ++HC CD +++ V+ + + A D + E K L+ +
Sbjct: 234 ---GTVGKSFGLDTEYHCRRCDGRTDLVSHVERLVEICKAVDLNDEIKKKVLDLGACLLR 290
Query: 1003 ASKDIRGRQLHEIADQMLTRL 1023
SK ++L + + +L
Sbjct: 291 GSKKPVAKELFNRVELAIAKL 311
>Medtr6g085190.1 | protein vernalization insensitive-like protein | HC
| chr6:32183355-32175843 | 20130731
Length = 639
Score = 52.0 bits (123), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 66/156 (42%), Gaps = 22/156 (14%)
Query: 875 CRNLSCRSQLPVDECDCKVCVQKNGFCRECMCLVCSKFDNASNTCSWVGC------DVCL 928
C+N +CR+ L D+ FCR C C +C FD+ + W+ C D C
Sbjct: 50 CKNSACRAVLSKDD----------TFCRRCSCCICHLFDDNKDPSLWLVCSESSQGDSCG 99
Query: 929 HWCHTDCGLRESYIRNGHSTTGTKGMTEMQFHCIACDHPSEMFGFVKEVFQNFAKDW-SA 987
CH +C L + G G + + C +C + + G K+ N AKD
Sbjct: 100 LSCHIECALHHEKV--GVVDHGQLMQLDGGYCCASCGKVTGILGSWKKQL-NIAKDARRV 156
Query: 988 ETLCKELEYVKRIFAASKDIRGRQLHEIADQMLTRL 1023
+ LC + R+ + +R ++LH++ + +L
Sbjct: 157 DVLCYRIYLSFRLLNGT--LRFKELHDMVQEAKAKL 190