Miyakogusa Predicted Gene

Lj3g3v3667640.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3667640.2 Non Characterized Hit- tr|I1LNY5|I1LNY5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.48244
PE,91.12,0,seg,NULL; ThiF,UBA/THIF-type NAD/FAD binding fold; no
description,NAD(P)-binding domain; AUTOPHAGY-R,CUFF.46184.2
         (169 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr0003s0540.1 | ubiquitin-like modifier-activating enzyme ATG...   288   2e-78

>Medtr0003s0540.1 | ubiquitin-like modifier-activating enzyme ATG7 |
           HC | scaffold0003:305855-310747 | 20130731
          Length = 698

 Score =  288 bits (736), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 139/169 (82%), Positives = 150/169 (88%)

Query: 1   MGLSLIGEALITIPQGWKDVVPNAVGWEHHKGRKAPRCISLAQSMDPSRLAVSAADLNLK 60
           M LSL+GEALIT+PQGWKD VPNAVGWE +K RK P CI+LAQSMDP+RLAVSAADLNLK
Sbjct: 275 MSLSLVGEALITVPQGWKDAVPNAVGWEINKRRKGPMCINLAQSMDPTRLAVSAADLNLK 334

Query: 61  LMRWRXXXXXXXXXXXXVKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQ 120
           LMRWR            +KCLLLGAGTLGCQVARMLMAWGVRKITL+DNGRVAMSNPLRQ
Sbjct: 335 LMRWRALPSLDLSALSSLKCLLLGAGTLGCQVARMLMAWGVRKITLVDNGRVAMSNPLRQ 394

Query: 121 SLYTLDNCLNGGEFKATAAVESLKRIFPAVEAEGIVMAIPMPGHPINSQ 169
           SLYT D+CLNGGEFKATAAVESLKRIFPAVEAEGIVMAIPMPGHP++S+
Sbjct: 395 SLYTFDDCLNGGEFKATAAVESLKRIFPAVEAEGIVMAIPMPGHPVHSR 443