Miyakogusa Predicted Gene

Lj3g3v3640210.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3640210.1 Non Characterized Hit- tr|I1LP14|I1LP14_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.17943
PE,48.48,0.000002,seg,NULL,CUFF.46137.1
         (125 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr0005s0160.1 | hypothetical protein | LC | scaffold0005:2559...    55   1e-08

>Medtr0005s0160.1 | hypothetical protein | LC |
           scaffold0005:255918-255622 | 20130731
          Length = 98

 Score = 55.5 bits (132), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/74 (50%), Positives = 51/74 (68%), Gaps = 5/74 (6%)

Query: 53  KAIGD-VFYGDDDYEEIHEHEKMYYKEDHVMESMRKASQIKAINKKKKQRNNDYCWSFFP 111
           KA+GD VFYG+DD EE++E     YK+D V+ SMR+A ++KA+ K  K++  +    +F 
Sbjct: 26  KAMGDDVFYGNDDCEEMNE---CIYKDD-VLVSMRRARELKALKKNNKKQKKNCYLKYFE 81

Query: 112 CFRFLKLLLGCGTK 125
           CFR L  LLGCGTK
Sbjct: 82  CFRCLWFLLGCGTK 95