Miyakogusa Predicted Gene

Lj3g3v3640170.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3640170.1 Non Characterized Hit- tr|I3SJB5|I3SJB5_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.64,0,seg,NULL;
Scramblase,Scramblase; UNCHARACTERIZED,NULL; PHOSPHOLIPID
SCRAMBLASE-RELATED,Scramblase,CUFF.46141.1
         (337 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g077510.1 | scramblase-like protein | HC | chr4:29674301-2...   496   e-140

>Medtr4g077510.1 | scramblase-like protein | HC |
           chr4:29674301-29666675 | 20130731
          Length = 350

 Score =  496 bits (1276), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 252/353 (71%), Positives = 273/353 (77%), Gaps = 19/353 (5%)

Query: 1   MNRLKEGLRFLSKIKFTSPHDVSRVRDFPIVSRRFGSKVDYQLTRDFLVKLWVADFKMXX 60
           MNRLK G R LSK    +  D        + ++ F ++   QL RDF VKLWV+D K   
Sbjct: 1   MNRLKHGWRLLSKSNINNLLDS---HPNALQTKLFATEAHQQLNRDFFVKLWVSDAKTQN 57

Query: 61  XXXXXXXXX----------------XXXXXXXXXXXXKHGVVKQPPVSQSVTGFLEPHSP 104
                                                   ++KQPP+SQSV+ F +P SP
Sbjct: 58  PRARKSIKCPGLDLDPRWFSASPVHADAAAAAAVTSKPKPLLKQPPISQSVSEFSKPESP 117

Query: 105 QEAMVAPLLARSNLLITRDIEWANLVLGFEQENRYAIVDACYPQSPVGFMREQSNVITRQ 164
           QEA VAPLLARSNLLITRDIEWANLVLGFEQENRY IVDACYPQSPVG +REQSN+ITRQ
Sbjct: 118 QEAKVAPLLARSNLLITRDIEWANLVLGFEQENRYGIVDACYPQSPVGLIREQSNLITRQ 177

Query: 165 LLRLRRPFVAYITDAMGNELFRVRRPFWWITSSIYAEIDGKEIGVVHRRWHLWRRIYDLY 224
           LLRLRRPFVA+ITDAMGNELFRVRRPFWWITSSIYAEIDGKEIGVVHRRWHLWRRIYDLY
Sbjct: 178 LLRLRRPFVAHITDAMGNELFRVRRPFWWITSSIYAEIDGKEIGVVHRRWHLWRRIYDLY 237

Query: 225 LGNKQFAVVENPGLWNWTFTLKDINGEVLGQIDRDWRGFGFEILTDAGQYVIRFGSSDPS 284
           LGN+QFAVVENPGLWNWTFTLKD +GEVL QIDRDWRGFGFEILTDAGQYVIRFG+SDPS
Sbjct: 238 LGNQQFAVVENPGLWNWTFTLKDADGEVLAQIDRDWRGFGFEILTDAGQYVIRFGNSDPS 297

Query: 285 SKIGLASAIQDLEVSRPLTLAERAVAVALAISLDNDYFSRHGGWGLPFMAVTE 337
           SKIGLA+AI+DLEV RPLTLAERAVAVALAISLDNDYFSRHGGWGLPF+ V E
Sbjct: 298 SKIGLANAIEDLEVKRPLTLAERAVAVALAISLDNDYFSRHGGWGLPFIDVGE 350