Miyakogusa Predicted Gene

Lj3g3v3640140.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3640140.1 Non Characterized Hit- tr|I1L5H6|I1L5H6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.25364
PE,91.01,0,seg,NULL; CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT
7,NULL; coiled-coil,NULL; COG7,Conserved olig,CUFF.46129.1
         (832 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr0004s0490.1 | oligomeric component-related/COG complex comp...  1517   0.0  
Medtr6g005610.1 | oligomeric component-related/COG complex compo...  1447   0.0  
Medtr6g005670.1 | oligomeric component-related/COG complex compo...  1247   0.0  

>Medtr0004s0490.1 | oligomeric component-related/COG complex
           component | HC | scaffold0004:240029-233585 | 20130731
          Length = 834

 Score = 1517 bits (3927), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 739/834 (88%), Positives = 786/834 (94%), Gaps = 2/834 (0%)

Query: 1   MMIDLGPFSNENFDPKKWINSASQTRHPQESLDKHLVDLEMKLQMLSEEIASSLEDQSSS 60
           MM+DL PFSNENFDPKKWINSA Q+RHP+ESLDKHLVDLEMKLQM+SEEIA+SLE+QS++
Sbjct: 1   MMVDLSPFSNENFDPKKWINSACQSRHPEESLDKHLVDLEMKLQMVSEEIAASLEEQSAA 60

Query: 61  ALLRVPRATRDVIRLRDDAVSLRSAVSAILLKLKKAEGSSAESIAALAKVDVVKQRMETA 120
           ALLRVPRATRDVIRLRDDAVSLRSAVSAIL KLKKAEGSS+ESI+ALAKVDVVKQRME A
Sbjct: 61  ALLRVPRATRDVIRLRDDAVSLRSAVSAILQKLKKAEGSSSESISALAKVDVVKQRMEAA 120

Query: 121 YETLQDAAGLTQLSSTVEDVFASGDLPRAAETLANMRHCLSAVGEVAEFANIRKQLEVLE 180
           YETLQDAAGLTQLSSTVEDVFASGDLPRAAETLANMRHCLSAVGEVAEFANIRKQL+VLE
Sbjct: 121 YETLQDAAGLTQLSSTVEDVFASGDLPRAAETLANMRHCLSAVGEVAEFANIRKQLQVLE 180

Query: 181 DRLDMMVQPRLTDALSNRKVDAAQDLRGILIRIGRFKSLESQYAKVHLKPIKQLWEDFVS 240
           DRLD MVQPRLTDALSNRKVDAAQDLRGILIRIGRFKSLESQY+KVHLKPIKQLWEDF S
Sbjct: 181 DRLDTMVQPRLTDALSNRKVDAAQDLRGILIRIGRFKSLESQYSKVHLKPIKQLWEDFES 240

Query: 241 RQRANKSANEKNEMERISSGGDFHSASPTISFSSWLPNFYDELLLYLEQEWKWCMVAFPE 300
           R+RANKSANEKNEMER SSGG F S  P +SFS+WLP+FYDELLLYLEQEWKWCMVAFPE
Sbjct: 241 RERANKSANEKNEMERTSSGGGFQSIPPALSFSNWLPSFYDELLLYLEQEWKWCMVAFPE 300

Query: 301 DYKTLVPRLLSETMVAIGSSFISHINLAIGEAVPETKALAKGIFDILSGDMQKGIKIQTK 360
           DYKTLVPRLLSETM+AIG+SFISHINLAIG+AVPETKALAKG+ DILSGDMQKGIK+QTK
Sbjct: 301 DYKTLVPRLLSETMMAIGASFISHINLAIGDAVPETKALAKGLSDILSGDMQKGIKLQTK 360

Query: 361 HLEVLIELHNMTGTFARNIQHLFSGSDVRVLMDVLKAVYMPYESFKQRYGQMERAILSSE 420
           HLE LI+LH++TGTFARNIQHLFSGSDV++LMDVLKAVY+PYESFKQRYGQMERAILSSE
Sbjct: 361 HLEALIDLHSITGTFARNIQHLFSGSDVQILMDVLKAVYLPYESFKQRYGQMERAILSSE 420

Query: 421 IAGVDLRGAVIRGVGAQGVELSETVRRMEESIPQVIILLEAAAERCISFTGGSEADELIL 480
           IAG+DLRGAVIRGVGAQGVELSETVRRMEESI QVIILLEA++ERCISFTGGSEADELIL
Sbjct: 421 IAGIDLRGAVIRGVGAQGVELSETVRRMEESIAQVIILLEASSERCISFTGGSEADELIL 480

Query: 481 ALDDIMLQYISTLQETLKSLRTVCGVDYGGD-TVKKEMEKKDGHQNARRVDLSSSEEEWS 539
           ALDDIML+YISTLQETLKSLRTVCGVDYGGD T KKE EKKDG QNARRVDL S+EEEWS
Sbjct: 481 ALDDIMLKYISTLQETLKSLRTVCGVDYGGDGTGKKEAEKKDGSQNARRVDLISNEEEWS 540

Query: 540 MVQGALQILTVADSLTSRSSVFEXXXXXXXXXXXXXXXFSVFGSSLDQNQTINDNEDGDL 599
           MVQGALQILTVADSLTSRSSVFE               FS FGS LD+NQTIN N++ + 
Sbjct: 541 MVQGALQILTVADSLTSRSSVFEASLRATLARLSTTLSFSAFGSRLDENQTINGNDNAEP 600

Query: 600 SVGGRAALDLATLRLVDVPEKARKLFNLLNQSKDPRFHALPIASQRVAAFADTVNELVYD 659
           S+GGRAALD+ATLRLVDVPEKARKLF+LLNQSKDPRFHALP+ASQRVAAFADTVNELVYD
Sbjct: 601 SLGGRAALDMATLRLVDVPEKARKLFSLLNQSKDPRFHALPLASQRVAAFADTVNELVYD 660

Query: 660 VLISKVRQRLSDVSRLPIWTSVEEQSAFPLPTFSAYPQSYVTSVGEYLLTLPQQLEPLAE 719
           VLISKVRQRLSDVSRLPIW+SVEEQ AF LPTFSAYPQSYVTSVGEYLLTLPQQLEPLAE
Sbjct: 661 VLISKVRQRLSDVSRLPIWSSVEEQGAFHLPTFSAYPQSYVTSVGEYLLTLPQQLEPLAE 720

Query: 720 GI-NSETNDEAQFFATEWMFKVAEGATALYIEQLRGIQNISDRGAQQLSVDIEYLSNVLS 778
           GI +SE NDEAQFFATEWMFKVAEGATALYIEQLRGIQ I+DRGAQQLSVDI+YLSNVLS
Sbjct: 721 GISSSEANDEAQFFATEWMFKVAEGATALYIEQLRGIQYITDRGAQQLSVDIDYLSNVLS 780

Query: 779 ALSMPIPPVLATFQTCLSTSRDQLKDLLKTDSGNQLDLPTANLVCKMRRVNLDS 832
           ALSMPIP VLATF +CLSTSRDQLKDLLKTDS NQLDLPTANLVCKMR++NLDS
Sbjct: 781 ALSMPIPAVLATFHSCLSTSRDQLKDLLKTDSANQLDLPTANLVCKMRQLNLDS 834


>Medtr6g005610.1 | oligomeric component-related/COG complex
           component | HC | chr6:853726-847060 | 20130731
          Length = 828

 Score = 1447 bits (3747), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 710/833 (85%), Positives = 762/833 (91%), Gaps = 6/833 (0%)

Query: 1   MMIDLGPFSNENFDPKKWINSASQTRHPQESLDKHLVDLEMKLQMLSEEIASSLEDQSSS 60
           MM+DL  FSN NFDPKKWIN+A  +RH Q+SLDKHL+DLEMKLQMLSEEI++SLE+QSS+
Sbjct: 1   MMVDLVQFSNSNFDPKKWINTACHSRHSQQSLDKHLIDLEMKLQMLSEEISASLEEQSSA 60

Query: 61  ALLRVPRATRDVIRLRDDAVSLRSAVSAILLKLKKAEGSSAESIAALAKVDVVKQRMETA 120
           ALL VPRATRDV+RLRDDA SLRSAVS IL  L+KAEGSSAESIAALAKVDVVKQRME A
Sbjct: 61  ALLHVPRATRDVVRLRDDAGSLRSAVSVILHNLQKAEGSSAESIAALAKVDVVKQRMEAA 120

Query: 121 YETLQDAAGLTQLSSTVEDVFASGDLPRAAETLANMRHCLSAVGEVAEFANIRKQLEVLE 180
           YETLQDAAGLTQLSSTVEDVF SGDLPRAAETLANMRHCLSAVGEVAEFANIRKQLEVLE
Sbjct: 121 YETLQDAAGLTQLSSTVEDVFTSGDLPRAAETLANMRHCLSAVGEVAEFANIRKQLEVLE 180

Query: 181 DRLDMMVQPRLTDALSNRKVDAAQDLRGILIRIGRFKSLESQYAKVHLKPIKQLWEDFVS 240
           DRLD MVQP LTDALSNRK+DAAQDLRG+LIRIGRFKSLESQY+KVHLKPIK+LWED  S
Sbjct: 181 DRLDTMVQPPLTDALSNRKIDAAQDLRGVLIRIGRFKSLESQYSKVHLKPIKKLWEDLES 240

Query: 241 RQRANKSANEKNEMERISSGGDFHSASPTISFSSWLPNFYDELLLYLEQEWKWCMVAFPE 300
           R+ A+KSANEK+EME +S+GGDF S SPTISFS+WLP+FYDELLLYLEQEWKWCMVAFPE
Sbjct: 241 REHASKSANEKSEMETMSTGGDFQS-SPTISFSNWLPSFYDELLLYLEQEWKWCMVAFPE 299

Query: 301 DYKTLVPRLLSETMVAIGSSFISHINLAIGEAVPETKALAKGIFDILSGDMQKGIKIQTK 360
           DYKTLVP+LLS+TM+AIG+SFISHINLAIG+AVPETKALAKG+ DILSGDMQKGIK+QTK
Sbjct: 300 DYKTLVPKLLSDTMMAIGASFISHINLAIGDAVPETKALAKGLSDILSGDMQKGIKLQTK 359

Query: 361 HLEVLIELHNMTGTFARNIQHLFSGSDVRVLMDVLKAVYMPYESFKQRYGQMERAILSSE 420
           HLE LIELHN+TGTFARNIQHLFSG DV VLMDVLK+VY+PYESFKQRYGQMERAILSSE
Sbjct: 360 HLESLIELHNITGTFARNIQHLFSGCDVLVLMDVLKSVYLPYESFKQRYGQMERAILSSE 419

Query: 421 IAGVDLRGAVIRGVGAQGVELSETVRRMEESIPQVIILLEAAAERCISFTGGSEADELIL 480
           IAG+DLRGAVIR VGAQGVELSET+RRMEESIPQVIILLEAAAERCISFTGGSEADELIL
Sbjct: 420 IAGIDLRGAVIRRVGAQGVELSETIRRMEESIPQVIILLEAAAERCISFTGGSEADELIL 479

Query: 481 ALDDIMLQYISTLQETLKSLRTVCGVDYGGDTVKKEMEKKDGHQNARRVDLSSSEEEWSM 540
           ALDDIML+YISTLQETLKSLRTVCGVDYGGD       KKD +QNAR+VDL S+EEEWSM
Sbjct: 480 ALDDIMLKYISTLQETLKSLRTVCGVDYGGDGTG----KKDENQNARKVDLISNEEEWSM 535

Query: 541 VQGALQILTVADSLTSRSSVFEXXXXXXXXXXXXXXXFSVFGSSLDQNQTINDNEDGDLS 600
           VQGALQILTVADSLTSRSSVFE               FS FGSSLDQNQ I+ NE  + S
Sbjct: 536 VQGALQILTVADSLTSRSSVFEASLRATLARFSTTLSFSAFGSSLDQNQIIHGNEYEEPS 595

Query: 601 VGGRAALDLATLRLVDVPEKARKLFNLLNQSKDPRFHALPIASQRVAAFADTVNELVYDV 660
            GGRA+LD+ATLRLV+VPEKARKLF+LLNQSKDPRFHALP+ASQRVAAF D VNELVYDV
Sbjct: 596 FGGRASLDMATLRLVNVPEKARKLFSLLNQSKDPRFHALPLASQRVAAFEDMVNELVYDV 655

Query: 661 LISKVRQRLSDVSRLPIWTSVEEQSAFPLPTFSAYPQSYVTSVGEYLLTLPQQLEPLAEG 720
           LISKVRQ LSDVSRLPIW+SVEEQSAF LP FSAYPQSYVTSVGEYLLTLPQQLEPLAEG
Sbjct: 656 LISKVRQCLSDVSRLPIWSSVEEQSAFHLPAFSAYPQSYVTSVGEYLLTLPQQLEPLAEG 715

Query: 721 INS-ETNDEAQFFATEWMFKVAEGATALYIEQLRGIQNISDRGAQQLSVDIEYLSNVLSA 779
           I++ E NDEAQFFATEWMFK+AEGAT LYIEQLRGIQ I+DRGAQQLSVDI+YLSNVLSA
Sbjct: 716 ISTGEANDEAQFFATEWMFKIAEGATTLYIEQLRGIQYITDRGAQQLSVDIDYLSNVLSA 775

Query: 780 LSMPIPPVLATFQTCLSTSRDQLKDLLKTDSGNQLDLPTANLVCKMRRVNLDS 832
           LSMPIP VL TF +CLSTSRDQLKDLLKTDS N LDLPTANLVCKMRRVNLDS
Sbjct: 776 LSMPIPAVLTTFHSCLSTSRDQLKDLLKTDSANHLDLPTANLVCKMRRVNLDS 828


>Medtr6g005670.1 | oligomeric component-related/COG complex
           component | HC | chr6:883840-878818 | 20130731
          Length = 755

 Score = 1247 bits (3226), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 637/832 (76%), Positives = 687/832 (82%), Gaps = 80/832 (9%)

Query: 2   MIDLGPFSNENFDPKKWINSASQTRHPQESLDKHLVDLEMKLQMLSEEIASSLEDQSSSA 61
           MIDL  FSN NFDPKKWIN+A  +RH Q     HL+DLEMKLQMLSEEI++SLE+QSS+A
Sbjct: 3   MIDLVSFSNSNFDPKKWINTACNSRHSQ-----HLIDLEMKLQMLSEEISASLEEQSSAA 57

Query: 62  LLRVPRATRDVIRLRDDAVSLRSAVSAILLKLKKAEGSSAESIAALAKVDVVKQRMETAY 121
           LLRVPRATRDVI LRDDA SL SAVS IL  L+K  GSSAESIAALAKVDVVKQRME AY
Sbjct: 58  LLRVPRATRDVICLRDDAGSLCSAVSVILHNLQKRNGSSAESIAALAKVDVVKQRMEVAY 117

Query: 122 ETLQDAAGLTQLSSTVEDVFASGDLPRAAETLANMRHCLSAVGEVAEFANIRKQLEVLED 181
           ETLQDAAGLTQLSSTVEDVF SGDLP AAETLANMRHCLSAVGEVAEFANIRKQLEVLED
Sbjct: 118 ETLQDAAGLTQLSSTVEDVFDSGDLPCAAETLANMRHCLSAVGEVAEFANIRKQLEVLED 177

Query: 182 RLDMMVQPRLTDALSNRKVDAAQDLRGILIRIGRFKSLESQYAKVHLKPIKQLWEDFVSR 241
           RLD M+             DAAQDL G+LIRIGRFKSLESQY+KVHLKPIKQLWED  SR
Sbjct: 178 RLDTMI-------------DAAQDLCGVLIRIGRFKSLESQYSKVHLKPIKQLWEDLESR 224

Query: 242 QRANKSANEKNEMERISSGGDFHSASPTISFSSWLPNFYDELLLYLEQEWKWCMVAFPED 301
           +RANKSANEK+EME +S+GGDF S SPT+SFS+WLP+FYDELLLYLEQEWKWCMVAFPED
Sbjct: 225 ERANKSANEKSEMETMSTGGDFQS-SPTVSFSNWLPSFYDELLLYLEQEWKWCMVAFPED 283

Query: 302 YKTLVPRLLSETMVAIGSSFISHINLAIGEAVPETKALAKGIFDILSGDMQKGIKIQTKH 361
           YKTLVP+LLSETM+AIG+SFISHINLAIG+AVPETKAL                      
Sbjct: 284 YKTLVPKLLSETMMAIGASFISHINLAIGDAVPETKAL---------------------- 321

Query: 362 LEVLIELHNMTGTFARNIQHLFSGSDVRVLMDVLKAVYMPYESFKQRYGQMERAILSSEI 421
                              HLFSGSDV+VL DVLK+VY+PYESFKQRYGQMERAILSSEI
Sbjct: 322 -------------------HLFSGSDVQVLTDVLKSVYLPYESFKQRYGQMERAILSSEI 362

Query: 422 AGVDLRGAVIRGVGAQGVELSETVRRMEESIPQVIILLEAAAERCISFTGGSEADELILA 481
             +DLRGAVIRGVGAQGVE+SETVRRMEESIPQV+ILLEAAA+RCI+FTGGSEADELILA
Sbjct: 363 EAIDLRGAVIRGVGAQGVEVSETVRRMEESIPQVVILLEAAAKRCINFTGGSEADELILA 422

Query: 482 LDDIMLQYISTLQETLKSLRTVCGVDYGGDTVKKEMEKKDGHQNARRVDLSSSEEEWSMV 541
           LDDIML+YIS LQETL SLRTVCGVDYGGD       KKD +QNARRVDL S+EEEWSMV
Sbjct: 423 LDDIMLKYISNLQETLNSLRTVCGVDYGGDGAG----KKDENQNARRVDLISNEEEWSMV 478

Query: 542 QGALQILTVADSLTSRSSVFEXXXXXXXXXXXXXXXFSVFGSSLDQNQTINDNEDGDLSV 601
           QGALQILTVADSL SRSSVFE               FS FGSSLDQNQ I+ NE  + S 
Sbjct: 479 QGALQILTVADSLKSRSSVFEASLRATLARLSTTLSFSAFGSSLDQNQIIHGNEYEEPSF 538

Query: 602 GGRAALDLATLRLVDVPEKARKLFNLLNQSKDPRFHALPIASQRVAAFADTVNELVYDVL 661
           GGR ALD+ATL+LV+VPEKARKLF+LLNQSKDPRFHALP+ASQRVAAF DT+NEL     
Sbjct: 539 GGR-ALDMATLQLVNVPEKARKLFSLLNQSKDPRFHALPLASQRVAAFEDTINEL----- 592

Query: 662 ISKVRQRLSDVSRLPIWTSVEEQSAFPLPTFSAYPQSYVTSVGEYLLTLPQQLEPLAEGI 721
                    DVSRL IW+SVEEQ+AF LPTFSAYPQSYVTSVGEYLLTLPQQLEPLAEG+
Sbjct: 593 ---------DVSRLSIWSSVEEQTAFRLPTFSAYPQSYVTSVGEYLLTLPQQLEPLAEGV 643

Query: 722 -NSETNDEAQFFATEWMFKVAEGATALYIEQLRGIQNISDRGAQQLSVDIEYLSNVLSAL 780
            +SE NDEAQFFATEWMFKVAEGAT LYIEQLRG+Q I+DRGAQQLSVDI+YLSNVLSAL
Sbjct: 644 SSSEANDEAQFFATEWMFKVAEGATTLYIEQLRGVQYITDRGAQQLSVDIDYLSNVLSAL 703

Query: 781 SMPIPPVLATFQTCLSTSRDQLKDLLKTDSGNQLDLPTANLVCKMRRVNLDS 832
           SMPIP VLATF +CLSTSRDQLKDL+KTDS NQLDLPTANLVCKMRRVNLDS
Sbjct: 704 SMPIPAVLATFHSCLSTSRDQLKDLVKTDSANQLDLPTANLVCKMRRVNLDS 755