Miyakogusa Predicted Gene

Lj3g3v3599500.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3599500.1 Non Characterized Hit- tr|D7KN82|D7KN82_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,37.91,1e-18,seg,NULL,CUFF.46038.1
         (319 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g055160.1 | transmembrane protein, putative | HC | chr1:24...   455   e-128
Medtr1g055160.2 | transmembrane protein, putative | HC | chr1:24...   446   e-125
Medtr4g076880.2 | transmembrane protein, putative | HC | chr4:29...   443   e-124
Medtr4g076880.1 | transmembrane protein, putative | HC | chr4:29...   443   e-124
Medtr1g055145.1 | hypothetical protein | LC | chr1:24321651-2432...   124   1e-28

>Medtr1g055160.1 | transmembrane protein, putative | HC |
           chr1:24333758-24338398 | 20130731
          Length = 318

 Score =  455 bits (1170), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 231/303 (76%), Positives = 248/303 (81%), Gaps = 3/303 (0%)

Query: 18  HGGVFA--STVPAFLWSSHYNLVSDNGLKESVNYQVISPKDLAKSVSSEAGWSNFLCKGN 75
           +G VFA  STVPAFLWSSHY L+SDNGLKESVNYQVISPKDLAKSV SEAGWSNFLCKG 
Sbjct: 17  NGLVFAIPSTVPAFLWSSHYKLISDNGLKESVNYQVISPKDLAKSVLSEAGWSNFLCKGK 76

Query: 76  KFQEPLDLALLFIGGELQSSDLSVYEQADSVLLDLLEISFARSNTSMAFPYVSASEDVSL 135
           KFQ+PLDLALLF+GGELQSSDLS+ + ADS L D L+ SF RSNTSMAFPYVSASEDV+L
Sbjct: 77  KFQDPLDLALLFVGGELQSSDLSLNKHADSALSDFLKDSFVRSNTSMAFPYVSASEDVNL 136

Query: 136 EDLLVSGFTEACGDDLGIGNIASLGSCSRDNTNHEQTGALHSVQDYLTKRKEESHSGKTD 195
           ED LVSGF EACGDDLGIGN+A LGSCS    N E+T ALHSVQ YLTKRKEESH GKTD
Sbjct: 137 EDSLVSGFAEACGDDLGIGNVAFLGSCSMGTGNREETKALHSVQAYLTKRKEESHKGKTD 196

Query: 196 LVMFCNGHSQALKNVDRTQSEGEVLSELIRSVEESGAKYAVLYVSDPSRSIKYPSYRELQ 255
           LV+FCNG  QA KNVDRTQSEGEVLSELI SVEESGAKYAVLYVSD SRSI+YPSYR+LQ
Sbjct: 197 LVVFCNG-PQASKNVDRTQSEGEVLSELISSVEESGAKYAVLYVSDLSRSIQYPSYRDLQ 255

Query: 256 RFLAESTNGNESSNATICNPVCQLASXXXXXXXXXXXXXXXXXXXXCCMMGIDTPTRFET 315
           RFLAEST GN S+N+T C+ VCQL S                    CCMMGID+PTRFE 
Sbjct: 256 RFLAESTTGNGSTNSTACDGVCQLKSSLLEGLLVGIVLLIILISGLCCMMGIDSPTRFEA 315

Query: 316 PQE 318
           PQE
Sbjct: 316 PQE 318


>Medtr1g055160.2 | transmembrane protein, putative | HC |
           chr1:24333765-24338290 | 20130731
          Length = 316

 Score =  446 bits (1147), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 229/303 (75%), Positives = 246/303 (81%), Gaps = 5/303 (1%)

Query: 18  HGGVFA--STVPAFLWSSHYNLVSDNGLKESVNYQVISPKDLAKSVSSEAGWSNFLCKGN 75
           +G VFA  STVPAFLWSSHY L+SDNGLKESVNYQVISPKDLAKSV SEAGWSNFLCKG 
Sbjct: 17  NGLVFAIPSTVPAFLWSSHYKLISDNGLKESVNYQVISPKDLAKSVLSEAGWSNFLCKGK 76

Query: 76  KFQEPLDLALLFIGGELQSSDLSVYEQADSVLLDLLEISFARSNTSMAFPYVSASEDVSL 135
           KFQ+PLDLALLF+GGE  SSDLS+ + ADS L D L+ SF RSNTSMAFPYVSASEDV+L
Sbjct: 77  KFQDPLDLALLFVGGE--SSDLSLNKHADSALSDFLKDSFVRSNTSMAFPYVSASEDVNL 134

Query: 136 EDLLVSGFTEACGDDLGIGNIASLGSCSRDNTNHEQTGALHSVQDYLTKRKEESHSGKTD 195
           ED LVSGF EACGDDLGIGN+A LGSCS    N E+T ALHSVQ YLTKRKEESH GKTD
Sbjct: 135 EDSLVSGFAEACGDDLGIGNVAFLGSCSMGTGNREETKALHSVQAYLTKRKEESHKGKTD 194

Query: 196 LVMFCNGHSQALKNVDRTQSEGEVLSELIRSVEESGAKYAVLYVSDPSRSIKYPSYRELQ 255
           LV+FCNG  QA KNVDRTQSEGEVLSELI SVEESGAKYAVLYVSD SRSI+YPSYR+LQ
Sbjct: 195 LVVFCNG-PQASKNVDRTQSEGEVLSELISSVEESGAKYAVLYVSDLSRSIQYPSYRDLQ 253

Query: 256 RFLAESTNGNESSNATICNPVCQLASXXXXXXXXXXXXXXXXXXXXCCMMGIDTPTRFET 315
           RFLAEST GN S+N+T C+ VCQL S                    CCMMGID+PTRFE 
Sbjct: 254 RFLAESTTGNGSTNSTACDGVCQLKSSLLEGLLVGIVLLIILISGLCCMMGIDSPTRFEA 313

Query: 316 PQE 318
           PQE
Sbjct: 314 PQE 316


>Medtr4g076880.2 | transmembrane protein, putative | HC |
           chr4:29415805-29419613 | 20130731
          Length = 318

 Score =  443 bits (1140), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 224/296 (75%), Positives = 243/296 (82%), Gaps = 1/296 (0%)

Query: 23  ASTVPAFLWSSHYNLVSDNGLKESVNYQVISPKDLAKSVSSEAGWSNFLCKGNKFQEPLD 82
           ++TVPAFLWSSHYNLVS+NGLKESVNYQVIS KDLAKSV SEAGWSNFLCKG KFQ+PLD
Sbjct: 24  STTVPAFLWSSHYNLVSENGLKESVNYQVISLKDLAKSVLSEAGWSNFLCKGKKFQDPLD 83

Query: 83  LALLFIGGELQSSDLSVYEQADSVLLDLLEISFARSNTSMAFPYVSASEDVSLEDLLVSG 142
           LALLF+GGELQSSDLS+ + ADS L  LL+ SF RSNTSMAFPYVSASEDV+LED LVSG
Sbjct: 84  LALLFVGGELQSSDLSLNKHADSALSYLLKDSFVRSNTSMAFPYVSASEDVNLEDSLVSG 143

Query: 143 FTEACGDDLGIGNIASLGSCSRDNTNHEQTGALHSVQDYLTKRKEESHSGKTDLVMFCNG 202
           F EACGDDLGIGN+A LGSCS  N N E+T AL SVQ YLTKRKEESH GKTDLV+FCNG
Sbjct: 144 FAEACGDDLGIGNVAFLGSCSMGNGNREETAALQSVQAYLTKRKEESHKGKTDLVVFCNG 203

Query: 203 HSQALKNVDRTQSEGEVLSELIRSVEESGAKYAVLYVSDPSRSIKYPSYRELQRFLAEST 262
             QA KNVD T+SEGEVLSELI SVEESGAKYAVLYVSD SRSI+YPSYR+LQRFLAEST
Sbjct: 204 -PQASKNVDSTKSEGEVLSELISSVEESGAKYAVLYVSDISRSIQYPSYRDLQRFLAEST 262

Query: 263 NGNESSNATICNPVCQLASXXXXXXXXXXXXXXXXXXXXCCMMGIDTPTRFETPQE 318
            GN S+N+T C+ VCQL S                    CCMMGID+PTRFE PQE
Sbjct: 263 TGNGSTNSTACDGVCQLKSSLLEGLLVGIVLLIILISGLCCMMGIDSPTRFEAPQE 318


>Medtr4g076880.1 | transmembrane protein, putative | HC |
           chr4:29415805-29419572 | 20130731
          Length = 318

 Score =  443 bits (1140), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 224/296 (75%), Positives = 243/296 (82%), Gaps = 1/296 (0%)

Query: 23  ASTVPAFLWSSHYNLVSDNGLKESVNYQVISPKDLAKSVSSEAGWSNFLCKGNKFQEPLD 82
           ++TVPAFLWSSHYNLVS+NGLKESVNYQVIS KDLAKSV SEAGWSNFLCKG KFQ+PLD
Sbjct: 24  STTVPAFLWSSHYNLVSENGLKESVNYQVISLKDLAKSVLSEAGWSNFLCKGKKFQDPLD 83

Query: 83  LALLFIGGELQSSDLSVYEQADSVLLDLLEISFARSNTSMAFPYVSASEDVSLEDLLVSG 142
           LALLF+GGELQSSDLS+ + ADS L  LL+ SF RSNTSMAFPYVSASEDV+LED LVSG
Sbjct: 84  LALLFVGGELQSSDLSLNKHADSALSYLLKDSFVRSNTSMAFPYVSASEDVNLEDSLVSG 143

Query: 143 FTEACGDDLGIGNIASLGSCSRDNTNHEQTGALHSVQDYLTKRKEESHSGKTDLVMFCNG 202
           F EACGDDLGIGN+A LGSCS  N N E+T AL SVQ YLTKRKEESH GKTDLV+FCNG
Sbjct: 144 FAEACGDDLGIGNVAFLGSCSMGNGNREETAALQSVQAYLTKRKEESHKGKTDLVVFCNG 203

Query: 203 HSQALKNVDRTQSEGEVLSELIRSVEESGAKYAVLYVSDPSRSIKYPSYRELQRFLAEST 262
             QA KNVD T+SEGEVLSELI SVEESGAKYAVLYVSD SRSI+YPSYR+LQRFLAEST
Sbjct: 204 -PQASKNVDSTKSEGEVLSELISSVEESGAKYAVLYVSDISRSIQYPSYRDLQRFLAEST 262

Query: 263 NGNESSNATICNPVCQLASXXXXXXXXXXXXXXXXXXXXCCMMGIDTPTRFETPQE 318
            GN S+N+T C+ VCQL S                    CCMMGID+PTRFE PQE
Sbjct: 263 TGNGSTNSTACDGVCQLKSSLLEGLLVGIVLLIILISGLCCMMGIDSPTRFEAPQE 318


>Medtr1g055145.1 | hypothetical protein | LC |
           chr1:24321651-24323881 | 20130731
          Length = 282

 Score =  124 bits (312), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 65/100 (65%), Positives = 71/100 (71%), Gaps = 6/100 (6%)

Query: 123 AFPYVSASEDVSLEDLLVSG-----FTEACGDDLGIGNIASLGSCSRDNTNHEQTGALHS 177
            FP +   ED+   D+ V       F EACGDDLGIGN+A LGSCS    N E+T ALHS
Sbjct: 182 GFPSLWVLEDLGKVDIWVGDERIQRFAEACGDDLGIGNVAFLGSCSMGTGNREETKALHS 241

Query: 178 VQDYLTKRKEESHSGKTDLVMFCNGHSQALKNVDRTQSEG 217
           VQ YLTKRKEESH GKTDLV+FCNG  QA KNVDRTQSEG
Sbjct: 242 VQAYLTKRKEESHKGKTDLVVFCNG-PQASKNVDRTQSEG 280