Miyakogusa Predicted Gene

Lj3g3v3599420.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3599420.1 Non Characterized Hit- tr|D8S652|D8S652_SELML
Putative uncharacterized protein OS=Selaginella
moelle,40.88,9e-19,seg,NULL,CUFF.46118.1
         (154 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g076640.1 | hypothetical protein | LC | chr4:29313688-2931...   213   7e-56
Medtr4g076620.1 | hypothetical protein | HC | chr4:29307835-2930...   204   2e-53
Medtr4g076610.1 | hypothetical protein | HC | chr4:29303440-2930...   110   8e-25

>Medtr4g076640.1 | hypothetical protein | LC |
           chr4:29313688-29316024 | 20130731
          Length = 603

 Score =  213 bits (541), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 106/154 (68%), Positives = 123/154 (79%)

Query: 1   MQRAMAFAFGPSKVVAPGFATSGIKTSGVLKTAVSTEKIRAVTHSVIASAEKTSISAMRT 60
           MQ+ ++ A G SKV+APGFATSG KTS  +KTAVS EKIRAVT   IASAEKTS S +R 
Sbjct: 450 MQKLLSVALGSSKVMAPGFATSGAKTSVFMKTAVSAEKIRAVTQVAIASAEKTSFSTLRL 509

Query: 61  TFYEIMRKRKVRPIGFLPWATFAGSVXXXXXXXXXXDGIECAIESLPAAPSIASLGRGIQ 120
            FY+IMRKRK++ +GFLPWA+FAGS+          DGIECAI+SLPAAPSIASLGRGIQ
Sbjct: 510 AFYDIMRKRKIQRVGFLPWASFAGSIATCTGLILYEDGIECAIQSLPAAPSIASLGRGIQ 569

Query: 121 HLREASQAVMKTEGTRIQGSIESLVNRIKKARDQ 154
           +LREAS+AVM+TEGTRIQ SIES VN I+ A DQ
Sbjct: 570 NLREASKAVMQTEGTRIQKSIESFVNSIRTAGDQ 603


>Medtr4g076620.1 | hypothetical protein | HC |
           chr4:29307835-29309972 | 20130731
          Length = 623

 Score =  204 bits (519), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 102/154 (66%), Positives = 116/154 (75%), Gaps = 12/154 (7%)

Query: 1   MQRAMAFAFGPSKVVAPGFATSGIKTSGVLKTAVSTEKIRAVTHSVIASAEKTSISAMRT 60
           MQ+ ++ + GPS             TSG +K A S EKIRAVTH VI SAEKTS+SAMR 
Sbjct: 482 MQKVLSVSLGPSN------------TSGFMKAAASAEKIRAVTHGVIYSAEKTSVSAMRA 529

Query: 61  TFYEIMRKRKVRPIGFLPWATFAGSVXXXXXXXXXXDGIECAIESLPAAPSIASLGRGIQ 120
            FYEIMRKRK++ +GFLPWATFAGS+          DGIECA+ESLPAAPSIASLGRGIQ
Sbjct: 530 AFYEIMRKRKIQRVGFLPWATFAGSIGTCTGLLLYGDGIECAVESLPAAPSIASLGRGIQ 589

Query: 121 HLREASQAVMKTEGTRIQGSIESLVNRIKKARDQ 154
           +LREASQAVM+TEGTR+Q SIESLVNRI K RDQ
Sbjct: 590 NLREASQAVMQTEGTRVQKSIESLVNRITKPRDQ 623


>Medtr4g076610.1 | hypothetical protein | HC |
           chr4:29303440-29303908 | 20130731
          Length = 115

 Score =  110 bits (274), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 53/85 (62%), Positives = 63/85 (74%)

Query: 66  MRKRKVRPIGFLPWATFAGSVXXXXXXXXXXDGIECAIESLPAAPSIASLGRGIQHLREA 125
           MRK K++ +GFLPWATFAG            DGIECAIESLPAA S ASL RGIQ+L E 
Sbjct: 1   MRKLKMQRVGFLPWATFAGRTGTCTALLFYGDGIECAIESLPAASSFASLSRGIQNLCEV 60

Query: 126 SQAVMKTEGTRIQGSIESLVNRIKK 150
           SQAVM+  GTR++ SIES+VNRI++
Sbjct: 61  SQAVMQIAGTRVRNSIESIVNRIER 85