Miyakogusa Predicted Gene

Lj3g3v3541710.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3541710.1 Non Characterized Hit- tr|I3SDS4|I3SDS4_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,97.06,0,ERLUMENR,ER lumen protein retaining receptor; ER LUMEN
PROTEIN RETAINING RECEPTOR,NULL; ER LUMEN PRO,CUFF.45982.1
         (272 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g075550.1 | ER lumen protein retaining receptor-like prote...   544   e-155
Medtr3g113920.1 | ER lumen protein retaining receptor-like prote...   475   e-134
Medtr8g012595.1 | ER lumen protein retaining receptor-like prote...   253   2e-67
Medtr8g012605.1 | ER lumen protein retaining receptor-like prote...   245   3e-65
Medtr8g012615.1 | ER lumen protein retaining receptor family pro...   214   6e-56
Medtr8g012600.1 | ER lumen protein retaining receptor-like prote...   114   1e-25
Medtr7g056337.1 | ER lumen protein retaining receptor-like prote...   101   9e-22
Medtr8g087430.1 | ER lumen protein retaining receptor-like prote...   100   2e-21
Medtr8g012610.1 | ER lumen protein retaining receptor family pro...    49   4e-06

>Medtr4g075550.1 | ER lumen protein retaining receptor-like protein
           | HC | chr4:28868861-28872059 | 20130731
          Length = 272

 Score =  544 bits (1402), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 264/272 (97%), Positives = 268/272 (98%)

Query: 1   MRPQRMSIHTVATWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSLGI 60
           MRPQR SIH ++TWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSLGI
Sbjct: 1   MRPQRTSIHAISTWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSLGI 60

Query: 61  SVLIYKLMKEKTCAGLSLKSQELTAMFLAVRLYCSFVMEYDIHTLLDFATFATTVWVIYM 120
           SVLIYKLMKEKTCAGLSLKSQELTA+FLAVRLYCSFVMEYDIHT+LD ATF TTVWVIYM
Sbjct: 61  SVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTILDLATFVTTVWVIYM 120

Query: 121 IRFKLKASYMEEKDNFAIYYVVIPCAVLALLIHPSTSHHILNRIFWAFCVYLEAVSVLPQ 180
           IRFKLKASYMEEKDNFAIYYVVIPCAVLALLIHPSTSHHILNRIFWAFCVYLEAVSVLPQ
Sbjct: 121 IRFKLKASYMEEKDNFAIYYVVIPCAVLALLIHPSTSHHILNRIFWAFCVYLEAVSVLPQ 180

Query: 181 LRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDTRGHLLVALGYGLWPSMVLISE 240
           LRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDTRGHLLVALGYGLWPSMVLISE
Sbjct: 181 LRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDTRGHLLVALGYGLWPSMVLISE 240

Query: 241 IVQTFILADFCYYYVKSVFGGQLVLRLPSGVV 272
           IVQTFILADFCYYYVKSVFGGQLVLRLPSGVV
Sbjct: 241 IVQTFILADFCYYYVKSVFGGQLVLRLPSGVV 272


>Medtr3g113920.1 | ER lumen protein retaining receptor-like protein
           | HC | chr3:53127367-53124389 | 20130731
          Length = 272

 Score =  475 bits (1222), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 226/272 (83%), Positives = 247/272 (90%)

Query: 1   MRPQRMSIHTVATWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSLGI 60
           M+  +  IH V  W+RRQPPK+K FLA++SG+AALV LR IVHDHDNLFVAAE VH+LG+
Sbjct: 1   MKATKSPIHAVTKWLRRQPPKMKLFLAILSGIAALVFLRMIVHDHDNLFVAAEFVHALGV 60

Query: 61  SVLIYKLMKEKTCAGLSLKSQELTAMFLAVRLYCSFVMEYDIHTLLDFATFATTVWVIYM 120
           ++LIYKL +EKTCAGLSLKSQELTA+FLAVRLYCSFVMEYDIHTLLD AT  TT+WVIYM
Sbjct: 61  ALLIYKLAQEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLDTATLGTTLWVIYM 120

Query: 121 IRFKLKASYMEEKDNFAIYYVVIPCAVLALLIHPSTSHHILNRIFWAFCVYLEAVSVLPQ 180
           IRFKLK+SYM+ KDN AIYYVVIPCAVL+LLIHP+T HH  NRI WAFCVYLEAVSVLPQ
Sbjct: 121 IRFKLKSSYMDAKDNLAIYYVVIPCAVLSLLIHPTTRHHYANRILWAFCVYLEAVSVLPQ 180

Query: 181 LRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDTRGHLLVALGYGLWPSMVLISE 240
           LRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDTRG LL ALGYGLWPSMVL+SE
Sbjct: 181 LRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDTRGRLLTALGYGLWPSMVLLSE 240

Query: 241 IVQTFILADFCYYYVKSVFGGQLVLRLPSGVV 272
           IVQT ILADFCYYY+KS+ GGQLVLRLPSGVV
Sbjct: 241 IVQTSILADFCYYYIKSLVGGQLVLRLPSGVV 272


>Medtr8g012595.1 | ER lumen protein retaining receptor-like protein
           | HC | chr8:3661072-3664753 | 20130731
          Length = 272

 Score =  253 bits (645), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 132/271 (48%), Positives = 189/271 (69%), Gaps = 3/271 (1%)

Query: 1   MRPQRMS-IHTVATWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSLG 59
           M  +R S ++ +  W+R++  KVK FL ++    A+V+L+  + + +  F A+E VH +G
Sbjct: 1   MGSKRDSPVNVMFGWLRKRSMKVKIFLGILLAFCAIVVLKHTIREPNFFFKASETVHIIG 60

Query: 60  ISVLIYKLMKEKTCAGLSLKSQELTAMFLAVRLYCSFVMEYDIHTLLDFATFATTVWVIY 119
           + VLIYKL   K+C+G+SLKSQELTA+FLA RL     +  ++H++LD     +T+ VI+
Sbjct: 61  LIVLIYKLYVHKSCSGISLKSQELTALFLATRLVGRAYIMANLHSVLDLILLLSTLLVIW 120

Query: 120 MIRFKLKASYMEEKDNFAIYYVVIPCAVLALLIHPSTSHHI-LNRIFWAFCVYLEAVSVL 178
           MIRFKLK+SY++E DN  +  +V  CA+LA++IHP  +HH  + R+FW F  YLE +S+L
Sbjct: 121 MIRFKLKSSYIKEFDNMWLSLLVAFCAILAIIIHPLFTHHSWIARVFWVFPTYLETISIL 180

Query: 179 PQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDTRGHLLVALGYG-LWPSMVL 237
           PQLR MQN KIVE FT +YVFALGV+RFLS A W++   DTRG  L   G+G  W   + 
Sbjct: 181 PQLRYMQNAKIVETFTGYYVFALGVSRFLSLAFWIIHTYDTRGKYLFFFGHGYFWMLSLF 240

Query: 238 ISEIVQTFILADFCYYYVKSVFGGQLVLRLP 268
           +SEI+Q+FILADFCYYY+KS   G+L+ ++P
Sbjct: 241 LSEIIQSFILADFCYYYIKSFMQGKLLRKMP 271


>Medtr8g012605.1 | ER lumen protein retaining receptor-like protein
           | LC | chr8:3675646-3679229 | 20130731
          Length = 268

 Score =  245 bits (626), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 120/243 (49%), Positives = 173/243 (71%), Gaps = 2/243 (0%)

Query: 1   MRPQRMS-IHTVATWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSLG 59
           M  +R S ++ ++ W+R++  KVK FL ++   +ALV L+F + D +  F  +E +H +G
Sbjct: 1   MGSKRDSPVNVLSIWLRKRSMKVKIFLGILLAFSALVALKFTIRDPNFFFQVSETIHIVG 60

Query: 60  ISVLIYKLMKEKTCAGLSLKSQELTAMFLAVRLYCSFVMEYDIHTLLDFATFATTVWVIY 119
           + VLIYKL  +KTC+GLSLKSQE+TA+FL +RL  S  ME +IHT+LD     +T+ VI+
Sbjct: 61  LIVLIYKLYAQKTCSGLSLKSQEITALFLTIRLGVSAYMEANIHTVLDLIYLLSTLLVIW 120

Query: 120 MIRFKLKASYMEEKDNFAIYYVVIPCAVLALLIHPSTSHHILNRIFWAFCVYLEAVSVLP 179
           +IRFKLK+SYM+E DN  + ++V+P A+LA+ IHP T H  + R+ WAF VY+EA+S+LP
Sbjct: 121 LIRFKLKSSYMKEFDNMWLSFLVVPSAILAIFIHPFTRHVWIARVLWAFTVYVEAISILP 180

Query: 180 QLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDTRGHLLVALGYG-LWPSMVLI 238
           QLR MQN K+VE FT +YVFALGV+RF+S A+W++   +T G  L   GYG LW    L+
Sbjct: 181 QLRYMQNAKMVETFTGYYVFALGVSRFVSLAYWIIHTYETGGKYLFLFGYGYLWMLAALL 240

Query: 239 SEI 241
           +E+
Sbjct: 241 TEV 243


>Medtr8g012615.1 | ER lumen protein retaining receptor family
           protein | HC | chr8:3685289-3686754 | 20130731
          Length = 204

 Score =  214 bits (545), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 102/195 (52%), Positives = 145/195 (74%), Gaps = 1/195 (0%)

Query: 75  GLSLKSQELTAMFLAVRLYCSFVMEYDIHTLLDFATFATTVWVIYMIRFKLKASYMEEKD 134
           GLSLK QEL A+FLA RL CS VME+D  T++D   F  T+ +I+++RF+LK+SY++E D
Sbjct: 9   GLSLKFQELNALFLATRLGCSVVMEFDYRTVMDLLYFLLTLMIIWLMRFRLKSSYIKEFD 68

Query: 135 NFAIYYVVIPCAVLALLIHPSTSHHILNRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFT 194
              + ++V+P A+LA+LI+P+T H  + R+ +AF +YLE VSVLPQ+R MQN K+VE FT
Sbjct: 69  TMWLSFLVVPSAILAVLINPATPHMWIVRVLFAFTMYLETVSVLPQIRYMQNAKMVETFT 128

Query: 195 AHYVFALGVARFLSCAHWVLQVLDTRGHLLVALGYG-LWPSMVLISEIVQTFILADFCYY 253
            +YVFALGV+RF S A+W++ V ++ G  L   GYG  W  ++ + E+VQ+FILADFCYY
Sbjct: 129 GYYVFALGVSRFFSLAYWIIHVYESGGRYLFFFGYGYFWMVVLQVLELVQSFILADFCYY 188

Query: 254 YVKSVFGGQLVLRLP 268
           Y+KS   GQL+ ++P
Sbjct: 189 YIKSFMQGQLLRKMP 203


>Medtr8g012600.1 | ER lumen protein retaining receptor-like protein
           | LC | chr8:3666180-3669994 | 20130731
          Length = 298

 Score =  114 bits (284), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 55/135 (40%), Positives = 92/135 (68%)

Query: 8   IHTVATWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSLGISVLIYKL 67
           ++ +++W+R +  KVK FL ++    A+V L+  + D +  ++A+  +H LG+  LIYKL
Sbjct: 9   VNVLSSWLRNRSMKVKIFLGILLAFCAVVTLKLTIKDLELFYIASNTIHILGLFALIYKL 68

Query: 68  MKEKTCAGLSLKSQELTAMFLAVRLYCSFVMEYDIHTLLDFATFATTVWVIYMIRFKLKA 127
              K+C+GLSLK+QELTA+FLA RL     ++ +IH+ LD     +T+ VI++IRF+LK+
Sbjct: 69  YVHKSCSGLSLKTQELTALFLATRLVGRIYIKANIHSALDVILLVSTLLVIWLIRFRLKS 128

Query: 128 SYMEEKDNFAIYYVV 142
           SY++E DN  + ++V
Sbjct: 129 SYIKEFDNMRLSFLV 143


>Medtr7g056337.1 | ER lumen protein retaining receptor-like protein
           | HC | chr7:19836915-19832407 | 20130731
          Length = 215

 Score =  101 bits (251), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 77/229 (33%), Positives = 131/229 (57%), Gaps = 21/229 (9%)

Query: 47  NLF-VAAEAVHSLGISVLIYKLMKEKTCAGLSLKSQELTAMFLAVR---LYCSFVMEYDI 102
           N+F +A +  H   + VL+ K+   K+CAG+SLK+QEL A+  A R   ++ ++V  Y+ 
Sbjct: 2   NIFRLAGDMTHLASVLVLLLKIHTIKSCAGVSLKTQELYALVFAARYLDIFTNYVSLYN- 60

Query: 103 HTLLDFATFATTVWVIYMIRFK--LKASYMEEKDNFAIYYVVIPCAVLALLIHPSTSHHI 160
            T++      ++  +++ +R+   ++ SY +++D F  Y++V+PC +LALLI+   +   
Sbjct: 61  -TVMKLIFLGSSFSIVWYMRYHKIVRRSYDKDQDTFRHYFLVLPCLLLALLINEKFT--- 116

Query: 161 LNRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDTR 220
              + W F +YLEAV++LPQL ++Q T+ ++  T  YVF LG  R L   +WV +   T 
Sbjct: 117 FKEVMWTFSLYLEAVAILPQLVLLQRTRNIDNLTGQYVFLLGGYRALYILNWVYRYF-TE 175

Query: 221 GHLLVALGYGLWPSMVLISEIVQTFILADFCYYYVKSVFGGQLVLRLPS 269
            H +  + +        +S +VQT + ADF YYY +S    Q  L LP+
Sbjct: 176 PHFVHWITW--------VSGLVQTLLYADFFYYYFQSWKNNQ-KLHLPA 215


>Medtr8g087430.1 | ER lumen protein retaining receptor-like protein
           | HC | chr8:36139880-36135155 | 20130731
          Length = 215

 Score =  100 bits (248), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/229 (34%), Positives = 126/229 (55%), Gaps = 21/229 (9%)

Query: 47  NLF-VAAEAVHSLGISVLIYKLMKEKTCAGLSLKSQELTAM-FLA--VRLYCSFVMEYDI 102
           N+F +A +  H L I VL+ K+   K+C+G+S K+QEL A+ FLA  + L+  F+  Y+ 
Sbjct: 2   NIFRLAGDMTHLLSILVLLLKIYATKSCSGVSRKTQELYAIVFLARYLDLFTDFISVYN- 60

Query: 103 HTLLDFATFATTVWVIYMIRFK--LKASYMEEKDNFAIYYVVIPCAVLALLIHPSTSHHI 160
            T +     A+++ +++ IR    +K SY ++ D F  Y +V    +LAL +H   +   
Sbjct: 61  -TFMKIVFIASSLAIVWCIRVHPMVKRSYDKDLDTFRHYLLVAASFLLALFLHEKFT--- 116

Query: 161 LNRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDTR 220
              IFWAF +YLEAV++LPQL ++Q +  V+  T  YVF LG  R L   +W+ +     
Sbjct: 117 FLEIFWAFSIYLEAVAILPQLVLLQRSGNVDNLTGQYVFFLGAYRGLYILNWIYRY---- 172

Query: 221 GHLLVALGYGLWPSMVLISEIVQTFILADFCYYYVKSVFGGQLVLRLPS 269
              L    +  W  +  +S +VQT + ADF YYY  S +     L+LP+
Sbjct: 173 ---LTEPRFTRW--IACVSGVVQTALYADFFYYYFIS-WKNNSKLKLPA 215


>Medtr8g012610.1 | ER lumen protein retaining receptor family
          protein, putative | HC | chr8:3683083-3683593 |
          20130731
          Length = 87

 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 21/72 (29%), Positives = 45/72 (62%)

Query: 4  QRMSIHTVATWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSLGISVL 63
          +  +++ +  W+ ++  KVK  L ++    A+V+L+  + D    ++A+ ++H +G+ VL
Sbjct: 5  RDFAVNVLIGWLSKRSMKVKILLGILLAFCAVVILKHTITDPHFFYIASGSIHIIGLVVL 64

Query: 64 IYKLMKEKTCAG 75
          +YKL+  KTC+G
Sbjct: 65 VYKLIVNKTCSG 76