Miyakogusa Predicted Gene

Lj3g3v3527570.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3527570.1 tr|Q9SD22|Q9SD22_ARATH AT3g51250/F24M12_290
OS=Arabidopsis thaliana GN=F24M12.290 PE=2
SV=1,69.44,4e-19,Senescence,Senescence/spartin-associated; GB DEF:
PUTATIVE SENESCENCE-ASSOCIATED PROTEIN,NULL; FAMIL,CUFF.45958.1
         (72 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g073530.1 | senescence/dehydration-associated-like protein...    82   1e-16
Medtr5g022450.1 | senescence/dehydration-associated-like protein...    75   1e-14
Medtr5g022450.2 | senescence/dehydration-associated-like protein...    75   1e-14
Medtr8g075350.1 | senescence/dehydration-associated-like protein...    73   5e-14
Medtr6g088680.1 | senescence/dehydration-associated-like protein...    46   1e-05

>Medtr4g073530.1 | senescence/dehydration-associated-like protein |
           HC | chr4:27879029-27877517 | 20130731
          Length = 404

 Score = 82.0 bits (201), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 37/43 (86%), Positives = 40/43 (93%)

Query: 14  HKYGEEAAQVTNEGLDAAGHAIGTAWTVFKLRKALNPKRVIKP 56
           HKYGE+AA++TNEG DAAGHAIGTAW VFKLRKALNPK VIKP
Sbjct: 345 HKYGEKAAEITNEGFDAAGHAIGTAWAVFKLRKALNPKSVIKP 387


>Medtr5g022450.1 | senescence/dehydration-associated-like protein |
           HC | chr5:8850707-8856565 | 20130731
          Length = 460

 Score = 75.5 bits (184), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 32/43 (74%), Positives = 37/43 (86%)

Query: 14  HKYGEEAAQVTNEGLDAAGHAIGTAWTVFKLRKALNPKRVIKP 56
           H+YGEEAA  TNEGL+AAGHA+GTAW  FK+RKA+NPK V KP
Sbjct: 393 HRYGEEAAHATNEGLNAAGHALGTAWAAFKIRKAINPKSVFKP 435


>Medtr5g022450.2 | senescence/dehydration-associated-like protein |
           HC | chr5:8850707-8856565 | 20130731
          Length = 454

 Score = 75.1 bits (183), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 32/43 (74%), Positives = 37/43 (86%)

Query: 14  HKYGEEAAQVTNEGLDAAGHAIGTAWTVFKLRKALNPKRVIKP 56
           H+YGEEAA  TNEGL+AAGHA+GTAW  FK+RKA+NPK V KP
Sbjct: 387 HRYGEEAAHATNEGLNAAGHALGTAWAAFKIRKAINPKSVFKP 429


>Medtr8g075350.1 | senescence/dehydration-associated-like protein |
           HC | chr8:31871181-31867632 | 20130731
          Length = 477

 Score = 73.2 bits (178), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 31/43 (72%), Positives = 37/43 (86%)

Query: 14  HKYGEEAAQVTNEGLDAAGHAIGTAWTVFKLRKALNPKRVIKP 56
           H+YGEEAA  T+EGLDAAGHA+GTAW  FK+R+ALNPK  +KP
Sbjct: 414 HRYGEEAANATSEGLDAAGHAVGTAWAAFKIRQALNPKSALKP 456


>Medtr6g088680.1 | senescence/dehydration-associated-like protein |
           HC | chr6:33818763-33815362 | 20130731
          Length = 374

 Score = 45.8 bits (107), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/37 (54%), Positives = 25/37 (67%)

Query: 14  HKYGEEAAQVTNEGLDAAGHAIGTAWTVFKLRKALNP 50
           ++YGEEA + T      AGHA  TAW V K+RKA+NP
Sbjct: 321 NRYGEEAGEATEHVFATAGHAANTAWNVSKIRKAINP 357