Miyakogusa Predicted Gene

Lj3g3v3527360.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3527360.1 tr|G7JPJ7|G7JPJ7_MEDTR Protein ELC OS=Medicago
truncatula GN=MTR_4g075250 PE=4 SV=1,74.52,0,SB,Steadiness box;
UEV,Ubiquitin E2 variant, N-terminal; Vps23_core,Steadiness box; no
description,U,CUFF.45948.1
         (404 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g075250.1 | ubiquitin-conjugating enzyme/RWD-like protein ...   290   1e-78
Medtr5g075880.1 | tumor susceptibility protein 101 protein | HC ...   149   5e-36

>Medtr4g075250.1 | ubiquitin-conjugating enzyme/RWD-like protein |
           HC | chr4:28738871-28737155 | 20130731
          Length = 411

 Score =  290 bits (743), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 138/166 (83%), Positives = 150/166 (90%), Gaps = 4/166 (2%)

Query: 1   MVPPAVQSPDPQATQQFLSSVLSQRGPSAVPYSEDTKWLIRQHLVALTAAFPSLEPKTAT 60
           MVPP    P+P+ TQQFLSS+LSQRGPSA+PYSEDTKWLIRQHL++L   FPSLEPKTAT
Sbjct: 1   MVPPP---PNPE-TQQFLSSILSQRGPSALPYSEDTKWLIRQHLLSLLTTFPSLEPKTAT 56

Query: 61  FTHNDGRSVNLLQAVGTIPMTYQSVTYNIPVVIWLMESYPRHPPCVYVNPTRDMIIKRPH 120
           +THNDGR+VNLLQA GTIPMTYQSVTYNIP+VIWLMESYPRHPP VYVNPTRDMIIK  H
Sbjct: 57  YTHNDGRAVNLLQADGTIPMTYQSVTYNIPIVIWLMESYPRHPPRVYVNPTRDMIIKHAH 116

Query: 121 AHVNPSGLVSVPYLHNWIYPSSNLVDLVLSTSHLFARDPPLYSQRR 166
            HVNPSGLVSVP+LHNWIYPSSNLVDLVL+ S +F RDPPLYSQRR
Sbjct: 117 PHVNPSGLVSVPHLHNWIYPSSNLVDLVLALSLIFGRDPPLYSQRR 162



 Score =  269 bits (688), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 130/187 (69%), Positives = 144/187 (77%)

Query: 218 SQTEDPSEVFKRNAINKLVETVHNDVTALRKTRESEMEGLFSLQGVLKQREDHLNRGVRX 277
           + TEDP+EVF+RNAINKLVE VHNDVTALRKTRE EMEGLF LQGVLKQRE+ LN GV+ 
Sbjct: 225 THTEDPTEVFRRNAINKLVEMVHNDVTALRKTREGEMEGLFGLQGVLKQREEVLNNGVKE 284

Query: 278 XXXXXXXXXXXXXXVLMNTDILEGWLRENQGKKLGGLENAEEAFDCMDVLSKQMLDCTAS 337
                         VLMNTD+LEGWLRENQGKKLG +ENAEEAF+C+DVLSKQMLDCT++
Sbjct: 285 MPDEMEGLEQQLQMVLMNTDVLEGWLRENQGKKLGSVENAEEAFECVDVLSKQMLDCTSA 344

Query: 338 DLAVEDTLYALDKAVQVGAVPFDQYLRSVRALSREQFFXXXXXXXXXXXXXXXXXSNMAA 397
           DLA+EDTLYALDK VQVG+VPFDQYLRSVRALSREQFF                 +NMAA
Sbjct: 345 DLAIEDTLYALDKGVQVGSVPFDQYLRSVRALSREQFFHRATAAKVRAAQLQAQVANMAA 404

Query: 398 RIQHYAS 404
           R  HY S
Sbjct: 405 RNHHYGS 411


>Medtr5g075880.1 | tumor susceptibility protein 101 protein | HC |
           chr5:32282374-32281817 | 20130731
          Length = 185

 Score =  149 bits (376), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 75/133 (56%), Positives = 97/133 (72%), Gaps = 1/133 (0%)

Query: 32  YSEDTKWLIRQHLVALTAAFPSLEPKTATFTHNDGR-SVNLLQAVGTIPMTYQSVTYNIP 90
           YSEDTK+LIR HL++L   +P+L+P T T  +     + N++QA  TIPMTY++VTY+ P
Sbjct: 38  YSEDTKFLIRDHLLSLLTNYPTLKPGTNTMIYKISLGAFNIVQADSTIPMTYKAVTYHTP 97

Query: 91  VVIWLMESYPRHPPCVYVNPTRDMIIKRPHAHVNPSGLVSVPYLHNWIYPSSNLVDLVLS 150
           +VI L+ESYPRHPP VY+NP   + IK  H +V+ S LV VPYL NWIYP+SNLVDL L 
Sbjct: 98  IVISLLESYPRHPPLVYLNPPPYLKIKLHHPYVSSSSLVIVPYLQNWIYPTSNLVDLALD 157

Query: 151 TSHLFARDPPLYS 163
            S  F R+PPL+S
Sbjct: 158 LSLTFGREPPLFS 170