Miyakogusa Predicted Gene

Lj3g3v3527150.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3527150.1 tr|G7KK50|G7KK50_MEDTR Alanyl-tRNA synthetase
(Fragment) OS=Medicago truncatula GN=MTR_6g045600 PE=3,92.76,0,Class
II aaRS and biotin synthetases,NULL; AA_TRNA_LIGASE_II_ALA,Alanyl-tRNA
synthetase, class IIc, ,CUFF.46379.1
         (334 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g074640.1 | alanine-tRNA ligase | HC | chr4:28430949-28445...   588   e-168
Medtr4g074670.1 | alanyl-tRNA synthetase | HC | chr4:28452022-28...   548   e-156
Medtr3g118360.1 | alanine-tRNA ligase | HC | chr3:55395797-55404...   221   6e-58
Medtr3g118360.3 | alanine-tRNA ligase | HC | chr3:55395877-55403...   221   7e-58
Medtr3g118360.2 | alanine-tRNA ligase | HC | chr3:55395877-55404...   221   7e-58
Medtr4g074670.2 | alanyl-tRNA synthetase | HC | chr4:28452943-28...   212   3e-55
Medtr3g118360.4 | alanine-tRNA ligase | HC | chr3:55395797-55404...    60   4e-09

>Medtr4g074640.1 | alanine-tRNA ligase | HC | chr4:28430949-28445218
           | 20130731
          Length = 950

 Score =  588 bits (1517), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 270/290 (93%), Positives = 277/290 (95%), Gaps = 1/290 (0%)

Query: 44  MPGPDALDLEWPAKRVRDTFVNFFKESKNHVYWQSSPVVPFNDPTLLFANAGMNQFKPIF 103
           M G D LD+EWPA RVRDTFV FF+E KNHVYW+SSPVVP NDPTLLFANAGMNQ+KPIF
Sbjct: 1   MTGTDTLDIEWPANRVRDTFVKFFEE-KNHVYWKSSPVVPVNDPTLLFANAGMNQYKPIF 59

Query: 104 LGTADPNTDLSKLSRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKTE 163
           LGT DPNT LSKLSRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFK E
Sbjct: 60  LGTVDPNTALSKLSRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKEE 119

Query: 164 AIGWAWELLTKVYKLPSDRIYATYFGGDEKAGLAPDTEARDIWLQFLPPGRVLPFGCKDN 223
           AI WAWELLTKVYKLPSDRIYATYFGGDEKAGLAPDTEARDIWL+FLPPGRVLPFGCKDN
Sbjct: 120 AISWAWELLTKVYKLPSDRIYATYFGGDEKAGLAPDTEARDIWLKFLPPGRVLPFGCKDN 179

Query: 224 FWEMGDTGPCGPCTEIHFDRIGNRDAASLVNNDDPTCIEIWNLVFIQFNREADGSLKSLP 283
           FWEMGDTGPCGPCTEIHFDRIGNRDAASLVNNDDPTCIEIWNLVFIQFNREAD SLKSLP
Sbjct: 180 FWEMGDTGPCGPCTEIHFDRIGNRDAASLVNNDDPTCIEIWNLVFIQFNREADSSLKSLP 239

Query: 284 AKHVDTGMGFERLTSILQNKMSNYDTDVFLPIFDAIQLATGARPYSGKVG 333
           AKHVDTGMGFERLTSILQ K+SNYDTDVF+PIFDAIQLATGARPYSGKVG
Sbjct: 240 AKHVDTGMGFERLTSILQRKLSNYDTDVFMPIFDAIQLATGARPYSGKVG 289


>Medtr4g074670.1 | alanyl-tRNA synthetase | HC |
           chr4:28452022-28459826 | 20130731
          Length = 635

 Score =  548 bits (1412), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 250/290 (86%), Positives = 268/290 (92%), Gaps = 1/290 (0%)

Query: 44  MPGPDALDLEWPAKRVRDTFVNFFKESKNHVYWQSSPVVPFNDPTLLFANAGMNQFKPIF 103
           MP  +++D+EWPAKRVRDTF  FF+E KNHV+W+SS VVP NDPTLLFANAGMNQFKPIF
Sbjct: 1   MPETESIDIEWPAKRVRDTFAKFFEE-KNHVHWKSSAVVPLNDPTLLFANAGMNQFKPIF 59

Query: 104 LGTADPNTDLSKLSRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKTE 163
           LGT DPNT LSKL+RACN QKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFK E
Sbjct: 60  LGTVDPNTALSKLTRACNIQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKEE 119

Query: 164 AIGWAWELLTKVYKLPSDRIYATYFGGDEKAGLAPDTEARDIWLQFLPPGRVLPFGCKDN 223
           AI WAWELLT+VY LPSDRIY TYFGGDEK GL PD EARDIWL+FLPPGRVLPFG KDN
Sbjct: 120 AISWAWELLTEVYNLPSDRIYVTYFGGDEKTGLGPDNEARDIWLKFLPPGRVLPFGSKDN 179

Query: 224 FWEMGDTGPCGPCTEIHFDRIGNRDAASLVNNDDPTCIEIWNLVFIQFNREADGSLKSLP 283
           FWEMGDTGPCGPC+EIHFDRIGNR+A+S VN++DP CIE+WNLVFIQFNREADGSLKSLP
Sbjct: 180 FWEMGDTGPCGPCSEIHFDRIGNRNASSFVNDEDPNCIELWNLVFIQFNREADGSLKSLP 239

Query: 284 AKHVDTGMGFERLTSILQNKMSNYDTDVFLPIFDAIQLATGARPYSGKVG 333
           AKHVDTGMGFERLTSILQ+K SNYDTDVF+PIFDAIQ ATGARPYSGKVG
Sbjct: 240 AKHVDTGMGFERLTSILQHKNSNYDTDVFVPIFDAIQQATGARPYSGKVG 289


>Medtr3g118360.1 | alanine-tRNA ligase | HC | chr3:55395797-55404715
           | 20130731
          Length = 980

 Score =  221 bits (564), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 116/261 (44%), Positives = 164/261 (62%), Gaps = 21/261 (8%)

Query: 59  VRDTFVNFFKESKNHVYWQSSPVVPFNDPTLLFANAGMNQFKPIFLGTADPNTDLSKLSR 118
           +R+ F++F+  S+ H    S+ +VP +DPT+L   AGM QFKPIFLG         ++ R
Sbjct: 86  IRERFLSFYA-SRGHKVLPSASLVP-DDPTVLLTIAGMLQFKPIFLGKLP-----RQVPR 138

Query: 119 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKTEAIGWAWELLTKVYKL 178
           A  +Q+CIR     ND+++VG  + HHTFFEMLGN+SFGDYFK +AI WAW+L T  + L
Sbjct: 139 ATTSQRCIRT----NDINNVGHTSRHHTFFEMLGNFSFGDYFKKQAIQWAWDLSTIEFGL 194

Query: 179 PSDRIYATYFGGDEKAGLAPDTEARDIWLQFL--PPGRVLPFGCKDNFWEMGDTGPCGPC 236
           P +R++ + +          D E   +W Q +  P  R+   G +DNFW  G TGPCGPC
Sbjct: 195 PPERLWISVY--------QDDHETFQLWSQQVGVPVERIKRLGEEDNFWTSGVTGPCGPC 246

Query: 237 TEIHFDRIGNRDAASLVNNDDPTCIEIWNLVFIQFNREADGSLKSLPAKHVDTGMGFERL 296
           +EI++D    R  A     DD   IE +NLVF+Q+N++ DGSL+ L  K++DTG+G ER+
Sbjct: 247 SEIYYDFHPERGYADADLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERM 306

Query: 297 TSILQNKMSNYDTDVFLPIFD 317
             ILQ   +NY+TD+ LPI +
Sbjct: 307 ARILQKAPNNYETDLILPIIE 327


>Medtr3g118360.3 | alanine-tRNA ligase | HC | chr3:55395877-55403229
           | 20130731
          Length = 869

 Score =  221 bits (564), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 116/261 (44%), Positives = 164/261 (62%), Gaps = 21/261 (8%)

Query: 59  VRDTFVNFFKESKNHVYWQSSPVVPFNDPTLLFANAGMNQFKPIFLGTADPNTDLSKLSR 118
           +R+ F++F+  S+ H    S+ +VP +DPT+L   AGM QFKPIFLG         ++ R
Sbjct: 86  IRERFLSFYA-SRGHKVLPSASLVP-DDPTVLLTIAGMLQFKPIFLGKLP-----RQVPR 138

Query: 119 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKTEAIGWAWELLTKVYKL 178
           A  +Q+CIR     ND+++VG  + HHTFFEMLGN+SFGDYFK +AI WAW+L T  + L
Sbjct: 139 ATTSQRCIRT----NDINNVGHTSRHHTFFEMLGNFSFGDYFKKQAIQWAWDLSTIEFGL 194

Query: 179 PSDRIYATYFGGDEKAGLAPDTEARDIWLQFL--PPGRVLPFGCKDNFWEMGDTGPCGPC 236
           P +R++ + +          D E   +W Q +  P  R+   G +DNFW  G TGPCGPC
Sbjct: 195 PPERLWISVY--------QDDHETFQLWSQQVGVPVERIKRLGEEDNFWTSGVTGPCGPC 246

Query: 237 TEIHFDRIGNRDAASLVNNDDPTCIEIWNLVFIQFNREADGSLKSLPAKHVDTGMGFERL 296
           +EI++D    R  A     DD   IE +NLVF+Q+N++ DGSL+ L  K++DTG+G ER+
Sbjct: 247 SEIYYDFHPERGYADADLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERM 306

Query: 297 TSILQNKMSNYDTDVFLPIFD 317
             ILQ   +NY+TD+ LPI +
Sbjct: 307 ARILQKAPNNYETDLILPIIE 327


>Medtr3g118360.2 | alanine-tRNA ligase | HC | chr3:55395877-55404591
           | 20130731
          Length = 871

 Score =  221 bits (564), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 116/261 (44%), Positives = 164/261 (62%), Gaps = 21/261 (8%)

Query: 59  VRDTFVNFFKESKNHVYWQSSPVVPFNDPTLLFANAGMNQFKPIFLGTADPNTDLSKLSR 118
           +R+ F++F+  S+ H    S+ +VP +DPT+L   AGM QFKPIFLG         ++ R
Sbjct: 86  IRERFLSFYA-SRGHKVLPSASLVP-DDPTVLLTIAGMLQFKPIFLGKLP-----RQVPR 138

Query: 119 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKTEAIGWAWELLTKVYKL 178
           A  +Q+CIR     ND+++VG  + HHTFFEMLGN+SFGDYFK +AI WAW+L T  + L
Sbjct: 139 ATTSQRCIRT----NDINNVGHTSRHHTFFEMLGNFSFGDYFKKQAIQWAWDLSTIEFGL 194

Query: 179 PSDRIYATYFGGDEKAGLAPDTEARDIWLQFL--PPGRVLPFGCKDNFWEMGDTGPCGPC 236
           P +R++ + +          D E   +W Q +  P  R+   G +DNFW  G TGPCGPC
Sbjct: 195 PPERLWISVY--------QDDHETFQLWSQQVGVPVERIKRLGEEDNFWTSGVTGPCGPC 246

Query: 237 TEIHFDRIGNRDAASLVNNDDPTCIEIWNLVFIQFNREADGSLKSLPAKHVDTGMGFERL 296
           +EI++D    R  A     DD   IE +NLVF+Q+N++ DGSL+ L  K++DTG+G ER+
Sbjct: 247 SEIYYDFHPERGYADADLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERM 306

Query: 297 TSILQNKMSNYDTDVFLPIFD 317
             ILQ   +NY+TD+ LPI +
Sbjct: 307 ARILQKAPNNYETDLILPIIE 327


>Medtr4g074670.2 | alanyl-tRNA synthetase | HC |
           chr4:28452943-28459496 | 20130731
          Length = 453

 Score =  212 bits (540), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 95/107 (88%), Positives = 103/107 (96%)

Query: 227 MGDTGPCGPCTEIHFDRIGNRDAASLVNNDDPTCIEIWNLVFIQFNREADGSLKSLPAKH 286
           MGDTGPCGPC+EIHFDRIGNR+A+S VN++DP CIE+WNLVFIQFNREADGSLKSLPAKH
Sbjct: 1   MGDTGPCGPCSEIHFDRIGNRNASSFVNDEDPNCIELWNLVFIQFNREADGSLKSLPAKH 60

Query: 287 VDTGMGFERLTSILQNKMSNYDTDVFLPIFDAIQLATGARPYSGKVG 333
           VDTGMGFERLTSILQ+K SNYDTDVF+PIFDAIQ ATGARPYSGKVG
Sbjct: 61  VDTGMGFERLTSILQHKNSNYDTDVFVPIFDAIQQATGARPYSGKVG 107


>Medtr3g118360.4 | alanine-tRNA ligase | HC | chr3:55395797-55404715
           | 20130731
          Length = 702

 Score = 59.7 bits (143), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 24/49 (48%), Positives = 37/49 (75%)

Query: 269 IQFNREADGSLKSLPAKHVDTGMGFERLTSILQNKMSNYDTDVFLPIFD 317
           +Q+N++ DGSL+ L  K++DTG+G ER+  ILQ   +NY+TD+ LPI +
Sbjct: 1   MQYNKKDDGSLEPLKQKNIDTGLGLERMARILQKAPNNYETDLILPIIE 49