Miyakogusa Predicted Gene

Lj3g3v3510290.3
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3510290.3 CUFF.45912.3
         (467 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g074220.1 | RING/U-box protein | HC | chr4:28252952-282417...   788   0.0  
Medtr4g074220.2 | RING/U-box protein | HC | chr4:28252952-282447...   640   0.0  
Medtr3g093960.1 | U-box protein | HC | chr3:42923644-42929741 | ...   157   3e-38
Medtr3g093960.3 | U-box protein | HC | chr3:42923655-42929741 | ...   133   3e-31
Medtr2g069480.1 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxyg...   128   1e-29
Medtr2g069480.2 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxyg...   127   2e-29
Medtr3g093960.2 | U-box protein | HC | chr3:42923655-42929741 | ...   126   4e-29
Medtr3g093960.5 | U-box protein | HC | chr3:42923644-42929741 | ...    88   2e-17
Medtr3g093960.4 | U-box protein | HC | chr3:42923644-42926829 | ...    60   7e-09

>Medtr4g074220.1 | RING/U-box protein | HC | chr4:28252952-28241793
           | 20130731
          Length = 594

 Score =  788 bits (2034), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 394/478 (82%), Positives = 417/478 (87%), Gaps = 11/478 (2%)

Query: 1   MEALSASLTRHNAALIELGSEDTALMRCGLEGARLFFRSRAHLGVGKGSRGVYTYRAGRA 60
           +E L +SL ++NAA+IELGSEDTALMRCGLEGARLFFRSRAHLGVGKGSRGVY YRAGRA
Sbjct: 117 VEMLCSSLLKYNAAVIELGSEDTALMRCGLEGARLFFRSRAHLGVGKGSRGVYMYRAGRA 176

Query: 61  LEDWDSSPPCMADIFRCMGKVSRSALCAIARILRLRSDVFTQLLDDAPLPANEVSSSVLV 120
           LED DSSPPCMADIFRCMGK SR+AL AIAR LRLRSDVF QLLDDAPLPANEVS+SVLV
Sbjct: 177 LEDCDSSPPCMADIFRCMGKASRAALSAIARHLRLRSDVFNQLLDDAPLPANEVSASVLV 236

Query: 121 VTYSHASFQNG-----GGKPTMNGEVEKGLLTLISSDTPGLQVCDPNGRWYAADSGSGPG 175
            TYSHAS QNG     GGKPT+NGEVEKGLLTLISSDTPGLQVCDPNGRWY ADSGSGPG
Sbjct: 237 GTYSHASLQNGKGAIGGGKPTVNGEVEKGLLTLISSDTPGLQVCDPNGRWYLADSGSGPG 296

Query: 176 DLLLITGKALSHATAGLRPAASYRASPDYFPGPNSGRRTCLAYRLMPQGNAILDCSPIAA 235
           DLLLITG+ALSHATAGL PAASYRASPD F  PNSG RT LAYRLMPQGNAILDCSPIAA
Sbjct: 297 DLLLITGQALSHATAGLHPAASYRASPDCFMSPNSGGRTSLAYRLMPQGNAILDCSPIAA 356

Query: 236 AGHAIPHSYGPISVSQFMDDLAAEELIDNRCDIADVAQSNVSKEPSLRSVLSDPLSGAFL 295
           AGH IP  Y PISVSQFMDDLAAEELI +RCD  DVAQ NV+K+PSLRSVLSDPLSG+FL
Sbjct: 357 AGHVIPQRYVPISVSQFMDDLAAEELIGSRCDNDDVAQRNVNKDPSLRSVLSDPLSGSFL 416

Query: 296 EDAMLVSCGHSFGGALLRRVIETSRCTLCNVDVETGSLIPNXXXXXXXXXIKHEDDRRLF 355
           EDAMLVSCGHSFGG  LRRVIETSRCTLCNVD++  SLIPN         +KHEDDRRLF
Sbjct: 417 EDAMLVSCGHSFGGLTLRRVIETSRCTLCNVDIDPSSLIPNHALRAAAAAVKHEDDRRLF 476

Query: 356 RNASLRKRRKEMGDQMDTMRRVNRENGEFAAADGLQRRVQYPFSVNEKVIIKGNRRTPEK 415
           RNA+LRKRRKEMG+ MD +RRVNRENG+F + DGLQR VQYPFSVNEKVIIKGNRRTPEK
Sbjct: 477 RNAALRKRRKEMGEPMDPIRRVNRENGDFTSPDGLQRGVQYPFSVNEKVIIKGNRRTPEK 536

Query: 416 LVGKEAVITSQCLNGWYSLKIIGTEEIVRLQYRSLRKLPNSPTTE------PIQNSSS 467
            VGKEAVITSQCLNGWY LKIIG+ E VRLQYRSLRKL NSPT E      P+QNSSS
Sbjct: 537 FVGKEAVITSQCLNGWYLLKIIGSGENVRLQYRSLRKLLNSPTMEDQVQLQPVQNSSS 594


>Medtr4g074220.2 | RING/U-box protein | HC | chr4:28252952-28244715
           | 20130731
          Length = 511

 Score =  640 bits (1651), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 319/384 (83%), Positives = 338/384 (88%), Gaps = 5/384 (1%)

Query: 1   MEALSASLTRHNAALIELGSEDTALMRCGLEGARLFFRSRAHLGVGKGSRGVYTYRAGRA 60
           +E L +SL ++NAA+IELGSEDTALMRCGLEGARLFFRSRAHLGVGKGSRGVY YRAGRA
Sbjct: 117 VEMLCSSLLKYNAAVIELGSEDTALMRCGLEGARLFFRSRAHLGVGKGSRGVYMYRAGRA 176

Query: 61  LEDWDSSPPCMADIFRCMGKVSRSALCAIARILRLRSDVFTQLLDDAPLPANEVSSSVLV 120
           LED DSSPPCMADIFRCMGK SR+AL AIAR LRLRSDVF QLLDDAPLPANEVS+SVLV
Sbjct: 177 LEDCDSSPPCMADIFRCMGKASRAALSAIARHLRLRSDVFNQLLDDAPLPANEVSASVLV 236

Query: 121 VTYSHASFQNG-----GGKPTMNGEVEKGLLTLISSDTPGLQVCDPNGRWYAADSGSGPG 175
            TYSHAS QNG     GGKPT+NGEVEKGLLTLISSDTPGLQVCDPNGRWY ADSGSGPG
Sbjct: 237 GTYSHASLQNGKGAIGGGKPTVNGEVEKGLLTLISSDTPGLQVCDPNGRWYLADSGSGPG 296

Query: 176 DLLLITGKALSHATAGLRPAASYRASPDYFPGPNSGRRTCLAYRLMPQGNAILDCSPIAA 235
           DLLLITG+ALSHATAGL PAASYRASPD F  PNSG RT LAYRLMPQGNAILDCSPIAA
Sbjct: 297 DLLLITGQALSHATAGLHPAASYRASPDCFMSPNSGGRTSLAYRLMPQGNAILDCSPIAA 356

Query: 236 AGHAIPHSYGPISVSQFMDDLAAEELIDNRCDIADVAQSNVSKEPSLRSVLSDPLSGAFL 295
           AGH IP  Y PISVSQFMDDLAAEELI +RCD  DVAQ NV+K+PSLRSVLSDPLSG+FL
Sbjct: 357 AGHVIPQRYVPISVSQFMDDLAAEELIGSRCDNDDVAQRNVNKDPSLRSVLSDPLSGSFL 416

Query: 296 EDAMLVSCGHSFGGALLRRVIETSRCTLCNVDVETGSLIPNXXXXXXXXXIKHEDDRRLF 355
           EDAMLVSCGHSFGG  LRRVIETSRCTLCNVD++  SLIPN         +KHEDDRRLF
Sbjct: 417 EDAMLVSCGHSFGGLTLRRVIETSRCTLCNVDIDPSSLIPNHALRAAAAAVKHEDDRRLF 476

Query: 356 RNASLRKRRKEMGDQMDTMRRVNR 379
           RNA+LRKRRKEMG+ MD +RRVNR
Sbjct: 477 RNAALRKRRKEMGEPMDPIRRVNR 500


>Medtr3g093960.1 | U-box protein | HC | chr3:42923644-42929741 |
           20130731
          Length = 432

 Score =  157 bits (396), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 91/244 (37%), Positives = 140/244 (57%), Gaps = 25/244 (10%)

Query: 219 RLMPQGNAILDCSPIAAAGHAIPHSYGPISVSQFMDDLAAEELIDNRCDIA---DVAQSN 275
           RL    N++ DC    +  H +  + G  SV + M D       D+ C  +   D   S+
Sbjct: 191 RLGKNHNSVTDCEEYYS--HYLQGTEGSPSVQKVMVD-------DDGCGFSGRKDFVYSS 241

Query: 276 VSKEPSLRSVLSDPLSGAFLEDAMLVSCGHSFGGALLRRVIETSRCTLCNVDVETGSLIP 335
            S E SLR++LSDP+SG  ++DAM++ CGHSFGG  ++ VI    C  C+      S+ P
Sbjct: 242 ESGE-SLRAILSDPVSGTLMDDAMILPCGHSFGGGGIQHVIRMKACCTCSQATLEESISP 300

Query: 336 NXXXXXXXXXIKHEDDRRLFRNASLRKRRKEMGDQMDTMRRVNRENGEFAAADGLQRR-V 394
           N          + E++ + +R++   KR++E  DQ           GE A  +  + R V
Sbjct: 301 NLSLRAAVQAYRREEESQFYRSS---KRKRERFDQGGF--------GECAVVESSRTRGV 349

Query: 395 QYPFSVNEKVIIKGNRRTPEKLVGKEAVITSQCLNGWYSLKIIGTEEIVRLQYRSLRKLP 454
           Q+PF+V ++VIIKGN+RTP++ VG+EA++T+QCLNGWY +K +   E V+LQYRSL K+ 
Sbjct: 350 QFPFAVMDRVIIKGNKRTPQRFVGREAIVTTQCLNGWYVVKTLDNAESVKLQYRSLAKVS 409

Query: 455 NSPT 458
           ++P+
Sbjct: 410 DNPS 413


>Medtr3g093960.3 | U-box protein | HC | chr3:42923655-42929741 |
           20130731
          Length = 403

 Score =  133 bits (335), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 79/218 (36%), Positives = 122/218 (55%), Gaps = 25/218 (11%)

Query: 219 RLMPQGNAILDCSPIAAAGHAIPHSYGPISVSQFMDDLAAEELIDNRCDIA---DVAQSN 275
           RL    N++ DC    +  H +  + G  SV + M D       D+ C  +   D   S+
Sbjct: 191 RLGKNHNSVTDCEEYYS--HYLQGTEGSPSVQKVMVD-------DDGCGFSGRKDFVYSS 241

Query: 276 VSKEPSLRSVLSDPLSGAFLEDAMLVSCGHSFGGALLRRVIETSRCTLCNVDVETGSLIP 335
            S E SLR++LSDP+SG  ++DAM++ CGHSFGG  ++ VI    C  C+      S+ P
Sbjct: 242 ESGE-SLRAILSDPVSGTLMDDAMILPCGHSFGGGGIQHVIRMKACCTCSQATLEESISP 300

Query: 336 NXXXXXXXXXIKHEDDRRLFRNASLRKRRKEMGDQMDTMRRVNRENGEFAAADGLQRR-V 394
           N          + E++ + +R++   KR++E  DQ           GE A  +  + R V
Sbjct: 301 NLSLRAAVQAYRREEESQFYRSS---KRKRERFDQGGF--------GECAVVESSRTRGV 349

Query: 395 QYPFSVNEKVIIKGNRRTPEKLVGKEAVITSQCLNGWY 432
           Q+PF+V ++VIIKGN+RTP++ VG+EA++T+QCLNGW+
Sbjct: 350 QFPFAVMDRVIIKGNKRTPQRFVGREAIVTTQCLNGWF 387


>Medtr2g069480.1 | 2-oxoglutarate (2OG) and Fe(II)-dependent
           oxygenase superfamily protein | HC |
           chr2:28902861-28898270 | 20130731
          Length = 466

 Score =  128 bits (322), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 99/304 (32%), Positives = 144/304 (47%), Gaps = 44/304 (14%)

Query: 4   LSASLTRHNAALIELGSEDTALMRCGLEGARLFFRSRA------------HLGVGKGS-- 49
           LS SL + +A +++  + D AL+R GLE ARL+F  R              L   K S  
Sbjct: 35  LSQSLAQFSAVIVQFPATDAALLRSGLESARLYFNQRETYPPADMIHNSDSLDWCKTSGY 94

Query: 50  -------RGVYTYRAGRALEDWDSS---PPC-MADIFRCMGKVSRSALCAIARILRLRSD 98
                  +  Y YR G    + ++S   PP  ++DIF   GK +R  L AI+  L LRS 
Sbjct: 95  YADPNLWQETYDYRPGLTPLEPNNSIELPPAGLSDIFSLFGKAARDILDAISYHLNLRSS 154

Query: 99  VFTQLLDDAPLPANEVSSSVL-VVTYSHASFQNGGGK---------------PTMNGEVE 142
            F ++LD+ PL   E+SSSVL V  ++  SFQ                    P  + +V+
Sbjct: 155 PFVEILDNIPLRNQEISSSVLSVCCHARPSFQGPQQHHNIAATQEDGQLLMYPDNDHQVD 214

Query: 143 KGLLTLISSDTPGLQVCDPNGRWYAADSGSGPGDLLLITGKALSHATAGLRPAASYRASP 202
           K L++L+ SD  GL V D  GRW   D   GP + ++  G AL  ATAG    A ++   
Sbjct: 215 KSLISLVKSDRAGLHVRDYQGRWILVDGDLGPQEAIVYPGLALYQATAGYVNPALHKTDT 274

Query: 203 DYFPGPNSGRRTCLAYRLMPQGNAILDCSPIAAAGHAIPHSYG-PISVSQFMDDLAAEEL 261
           +     N   R  L ++L+P+    LDCS + AAG+ +   +  P+ V  FM      +L
Sbjct: 275 NM--EANMYGRCSLGFKLLPKSMTSLDCSEMRAAGYGVDSQFQLPVPVDDFMQRSHPTDL 332

Query: 262 IDNR 265
           + NR
Sbjct: 333 LFNR 336


>Medtr2g069480.2 | 2-oxoglutarate (2OG) and Fe(II)-dependent
           oxygenase superfamily protein | HC |
           chr2:28902861-28898270 | 20130731
          Length = 361

 Score =  127 bits (319), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 99/304 (32%), Positives = 144/304 (47%), Gaps = 44/304 (14%)

Query: 4   LSASLTRHNAALIELGSEDTALMRCGLEGARLFFRSRA------------HLGVGKGS-- 49
           LS SL + +A +++  + D AL+R GLE ARL+F  R              L   K S  
Sbjct: 35  LSQSLAQFSAVIVQFPATDAALLRSGLESARLYFNQRETYPPADMIHNSDSLDWCKTSGY 94

Query: 50  -------RGVYTYRAGRALEDWDSS---PPC-MADIFRCMGKVSRSALCAIARILRLRSD 98
                  +  Y YR G    + ++S   PP  ++DIF   GK +R  L AI+  L LRS 
Sbjct: 95  YADPNLWQETYDYRPGLTPLEPNNSIELPPAGLSDIFSLFGKAARDILDAISYHLNLRSS 154

Query: 99  VFTQLLDDAPLPANEVSSSVL-VVTYSHASFQNGGGK---------------PTMNGEVE 142
            F ++LD+ PL   E+SSSVL V  ++  SFQ                    P  + +V+
Sbjct: 155 PFVEILDNIPLRNQEISSSVLSVCCHARPSFQGPQQHHNIAATQEDGQLLMYPDNDHQVD 214

Query: 143 KGLLTLISSDTPGLQVCDPNGRWYAADSGSGPGDLLLITGKALSHATAGLRPAASYRASP 202
           K L++L+ SD  GL V D  GRW   D   GP + ++  G AL  ATAG    A ++   
Sbjct: 215 KSLISLVKSDRAGLHVRDYQGRWILVDGDLGPQEAIVYPGLALYQATAGYVNPALHKTDT 274

Query: 203 DYFPGPNSGRRTCLAYRLMPQGNAILDCSPIAAAGHAIPHSYG-PISVSQFMDDLAAEEL 261
           +     N   R  L ++L+P+    LDCS + AAG+ +   +  P+ V  FM      +L
Sbjct: 275 NM--EANMYGRCSLGFKLLPKSMTSLDCSEMRAAGYGVDSQFQLPVPVDDFMQRSHPTDL 332

Query: 262 IDNR 265
           + NR
Sbjct: 333 LFNR 336


>Medtr3g093960.2 | U-box protein | HC | chr3:42923655-42929741 |
           20130731
          Length = 385

 Score =  126 bits (317), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 78/216 (36%), Positives = 120/216 (55%), Gaps = 25/216 (11%)

Query: 219 RLMPQGNAILDCSPIAAAGHAIPHSYGPISVSQFMDDLAAEELIDNRCDIA---DVAQSN 275
           RL    N++ DC    +  H +  + G  SV + M D       D+ C  +   D   S+
Sbjct: 191 RLGKNHNSVTDCEEYYS--HYLQGTEGSPSVQKVMVD-------DDGCGFSGRKDFVYSS 241

Query: 276 VSKEPSLRSVLSDPLSGAFLEDAMLVSCGHSFGGALLRRVIETSRCTLCNVDVETGSLIP 335
            S E SLR++LSDP+SG  ++DAM++ CGHSFGG  ++ VI    C  C+      S+ P
Sbjct: 242 ESGE-SLRAILSDPVSGTLMDDAMILPCGHSFGGGGIQHVIRMKACCTCSQATLEESISP 300

Query: 336 NXXXXXXXXXIKHEDDRRLFRNASLRKRRKEMGDQMDTMRRVNRENGEFAAADGLQRR-V 394
           N          + E++ + +R++   KR++E  DQ           GE A  +  + R V
Sbjct: 301 NLSLRAAVQAYRREEESQFYRSS---KRKRERFDQGGF--------GECAVVESSRTRGV 349

Query: 395 QYPFSVNEKVIIKGNRRTPEKLVGKEAVITSQCLNG 430
           Q+PF+V ++VIIKGN+RTP++ VG+EA++T+QCLNG
Sbjct: 350 QFPFAVMDRVIIKGNKRTPQRFVGREAIVTTQCLNG 385


>Medtr3g093960.5 | U-box protein | HC | chr3:42923644-42929741 |
           20130731
          Length = 384

 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 63/193 (32%), Positives = 98/193 (50%), Gaps = 25/193 (12%)

Query: 219 RLMPQGNAILDCSPIAAAGHAIPHSYGPISVSQFMDDLAAEELIDNRCDIA---DVAQSN 275
           RL    N++ DC    +  H +  + G  SV + M D       D+ C  +   D   S+
Sbjct: 191 RLGKNHNSVTDCEEYYS--HYLQGTEGSPSVQKVMVD-------DDGCGFSGRKDFVYSS 241

Query: 276 VSKEPSLRSVLSDPLSGAFLEDAMLVSCGHSFGGALLRRVIETSRCTLCNVDVETGSLIP 335
            S E SLR++LSDP+SG  ++DAM++ CGHSFGG  ++ VI    C  C+      S+ P
Sbjct: 242 ESGE-SLRAILSDPVSGTLMDDAMILPCGHSFGGGGIQHVIRMKACCTCSQATLEESISP 300

Query: 336 NXXXXXXXXXIKHEDDRRLFRNASLRKRRKEMGDQMDTMRRVNRENGEFAAADGLQRR-V 394
           N          + E++ + +R++   KR++E  DQ           GE A  +  + R V
Sbjct: 301 NLSLRAAVQAYRREEESQFYRSS---KRKRERFDQGGF--------GECAVVESSRTRGV 349

Query: 395 QYPFSVNEKVIIK 407
           Q+PF+V ++VIIK
Sbjct: 350 QFPFAVMDRVIIK 362


>Medtr3g093960.4 | U-box protein | HC | chr3:42923644-42926829 |
           20130731
          Length = 307

 Score = 59.7 bits (143), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 38/101 (37%), Positives = 56/101 (55%), Gaps = 13/101 (12%)

Query: 219 RLMPQGNAILDCSPIAAAGHAIPHSYGPISVSQFMDDLAAEELIDNRCDIA---DVAQSN 275
           RL    N++ DC    +  H +  + G  SV + M D       D+ C  +   D   S+
Sbjct: 191 RLGKNHNSVTDCEEYYS--HYLQGTEGSPSVQKVMVD-------DDGCGFSGRKDFVYSS 241

Query: 276 VSKEPSLRSVLSDPLSGAFLEDAMLVSCGHSFGGALLRRVI 316
            S E SLR++LSDP+SG  ++DAM++ CGHSFGG  ++ VI
Sbjct: 242 ESGE-SLRAILSDPVSGTLMDDAMILPCGHSFGGGGIQHVI 281