Miyakogusa Predicted Gene

Lj3g3v3500240.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3500240.2 tr|H4F2D1|H4F2D1_9RHIZ NAD-dependent
epimerase/dehydratase OS=Rhizobium sp. PDO1-076 GN=PDO_4381
PE=,33.53,5e-19,no description,NAD(P)-binding domain; NAD(P)-binding
Rossmann-fold domains,NULL; BLL6421 PROTEIN,NUL,CUFF.45875.2
         (205 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g022940.1 | NAD-dependent epimerase/dehydratase family pro...   298   3e-81
Medtr1g022940.2 | NAD-dependent epimerase/dehydratase family pro...   297   5e-81

>Medtr1g022940.1 | NAD-dependent epimerase/dehydratase family
           protein | HC | chr1:7253109-7248613 | 20130731
          Length = 341

 Score =  298 bits (762), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 145/202 (71%), Positives = 166/202 (82%), Gaps = 3/202 (1%)

Query: 1   MEVGQ---IRGSAVYLHRGHHRRSLSVSLSIAPPKSEKRMFMLGMGFVGQTLARKLHNQG 57
           ME+G    +R    ++HR       + + ++   KSE  MF+LG+GFVGQTLARKL NQ 
Sbjct: 1   MEIGSPICLRHGHRHVHRNVRISLSTTTPTLLSTKSENSMFILGLGFVGQTLARKLQNQR 60

Query: 58  WVVSGTCTNHVKKKQLEDMGFHVHLFDANYPDLNVLQLLKNYTHFLVSVPPMLGIGDPML 117
           W VSGTCT HVKKK+LEDMGFHVHLFDAN+PD ++LQ L+NYTHFLVSVPP++GIGDPML
Sbjct: 61  WTVSGTCTTHVKKKKLEDMGFHVHLFDANHPDPSILQQLRNYTHFLVSVPPVVGIGDPML 120

Query: 118 QHEELIRSSLVNGDMQWLCYLSSTSVYGDCGGELVDEDYPTNPENELAKLRLASEEGWSN 177
           QHEELIRSSLVNGD++WL YLSSTSVYGDC GELVDEDYPTNPENE AKLRL SE GWSN
Sbjct: 121 QHEELIRSSLVNGDLKWLSYLSSTSVYGDCDGELVDEDYPTNPENESAKLRLNSELGWSN 180

Query: 178 LAHCLGFSPLIFRLGGIYGPRR 199
           LAH +G SPL+FRLGGIYGP R
Sbjct: 181 LAHHIGLSPLLFRLGGIYGPGR 202


>Medtr1g022940.2 | NAD-dependent epimerase/dehydratase family
           protein | HC | chr1:7253102-7249359 | 20130731
          Length = 251

 Score =  297 bits (760), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 146/208 (70%), Positives = 168/208 (80%), Gaps = 3/208 (1%)

Query: 1   MEVGQ---IRGSAVYLHRGHHRRSLSVSLSIAPPKSEKRMFMLGMGFVGQTLARKLHNQG 57
           ME+G    +R    ++HR       + + ++   KSE  MF+LG+GFVGQTLARKL NQ 
Sbjct: 1   MEIGSPICLRHGHRHVHRNVRISLSTTTPTLLSTKSENSMFILGLGFVGQTLARKLQNQR 60

Query: 58  WVVSGTCTNHVKKKQLEDMGFHVHLFDANYPDLNVLQLLKNYTHFLVSVPPMLGIGDPML 117
           W VSGTCT HVKKK+LEDMGFHVHLFDAN+PD ++LQ L+NYTHFLVSVPP++GIGDPML
Sbjct: 61  WTVSGTCTTHVKKKKLEDMGFHVHLFDANHPDPSILQQLRNYTHFLVSVPPVVGIGDPML 120

Query: 118 QHEELIRSSLVNGDMQWLCYLSSTSVYGDCGGELVDEDYPTNPENELAKLRLASEEGWSN 177
           QHEELIRSSLVNGD++WL YLSSTSVYGDC GELVDEDYPTNPENE AKLRL SE GWSN
Sbjct: 121 QHEELIRSSLVNGDLKWLSYLSSTSVYGDCDGELVDEDYPTNPENESAKLRLNSELGWSN 180

Query: 178 LAHCLGFSPLIFRLGGIYGPRRREERSI 205
           LAH +G SPL+FRLGGIYGP R    +I
Sbjct: 181 LAHHIGLSPLLFRLGGIYGPGRSAVDTI 208