Miyakogusa Predicted Gene
- Lj3g3v3500230.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v3500230.1 tr|D7LE02|D7LE02_ARALL Pentatricopeptide
repeat-containing protein OS=Arabidopsis lyrata subsp.
lyra,27.2,5e-19,PPR_2,Pentatricopeptide repeat; PPR,Pentatricopeptide
repeat; PGR3 (PROTON GRADIENT REGULATION 3),NU,CUFF.45874.1
(259 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g074150.2 | PPR containing plant-like protein | HC | chr4:... 360 1e-99
Medtr4g074150.1 | PPR containing plant-like protein | HC | chr4:... 360 1e-99
Medtr2g036960.1 | PPR containing plant-like protein | HC | chr2:... 167 7e-42
Medtr7g076707.1 | PPR containing plant-like protein | HC | chr7:... 157 6e-39
Medtr7g093900.1 | PPR containing plant-like protein | HC | chr7:... 156 2e-38
Medtr7g093900.2 | PPR containing plant-like protein | HC | chr7:... 156 2e-38
Medtr2g018870.1 | PPR containing plant-like protein | HC | chr2:... 154 6e-38
Medtr6g093170.1 | PPR containing protein | HC | chr6:35177726-35... 152 3e-37
Medtr5g024360.1 | PPR containing plant-like protein | HC | chr5:... 150 2e-36
Medtr4g113830.1 | organelle transcript processing protein, putat... 148 6e-36
Medtr8g086560.1 | PPR containing plant protein | HC | chr8:35911... 147 1e-35
Medtr4g007160.1 | PPR containing plant-like protein | HC | chr4:... 146 2e-35
Medtr5g006420.1 | organelle transcript processing protein, putat... 145 3e-35
Medtr3g098280.1 | pentatricopeptide (PPR) repeat protein | HC | ... 145 5e-35
Medtr2g094430.1 | pentatricopeptide (PPR) repeat protein | HC | ... 145 5e-35
Medtr4g024860.1 | SLOW growth protein | HC | chr4:8430392-842602... 144 6e-35
Medtr5g095690.1 | pentatricopeptide (PPR) repeat protein | HC | ... 144 8e-35
Medtr4g086490.1 | PPR containing plant protein | HC | chr4:33903... 144 1e-34
Medtr2g024080.1 | PPR containing plant-like protein | HC | chr2:... 142 3e-34
Medtr1g014340.1 | PPR containing plant-like protein | HC | chr1:... 142 4e-34
Medtr1g014340.2 | PPR containing plant-like protein | HC | chr1:... 142 4e-34
Medtr8g105210.1 | PPR containing plant-like protein | HC | chr8:... 142 4e-34
Medtr3g011940.1 | pentatricopeptide (PPR) repeat protein | HC | ... 141 6e-34
Medtr1g085700.1 | pentatricopeptide (PPR) repeat protein, putati... 141 6e-34
Medtr7g032360.1 | PPR containing plant-like protein | HC | chr7:... 141 6e-34
Medtr7g076020.1 | pentatricopeptide (PPR) repeat protein | HC | ... 141 7e-34
Medtr5g018690.1 | PPR containing protein | HC | chr5:6968759-697... 140 1e-33
Medtr7g033400.1 | PPR containing protein | HC | chr7:12012362-12... 139 4e-33
Medtr3g109380.2 | PPR containing plant-like protein | HC | chr3:... 138 6e-33
Medtr3g109380.1 | PPR containing plant-like protein | HC | chr3:... 138 6e-33
Medtr1g112500.1 | pentatricopeptide (PPR) repeat protein | HC | ... 137 8e-33
Medtr7g023780.1 | editing factor 22 | HC | chr7:7790817-7787040 ... 137 1e-32
Medtr4g094592.1 | pentatricopeptide (PPR) repeat protein | HC | ... 136 2e-32
Medtr5g043450.1 | PPR containing plant-like protein | HC | chr5:... 136 2e-32
Medtr7g089260.1 | pentatricopeptide (PPR) repeat protein | HC | ... 135 3e-32
Medtr8g086040.1 | pentatricopeptide (PPR) repeat protein | HC | ... 134 8e-32
Medtr4g011570.1 | pentatricopeptide (PPR) repeat protein | HC | ... 134 8e-32
Medtr4g082470.1 | PPR containing plant-like protein | HC | chr4:... 132 2e-31
Medtr3g011950.1 | pentatricopeptide (PPR) repeat protein | HC | ... 132 3e-31
Medtr3g117150.1 | organelle transcript processing protein, putat... 132 3e-31
Medtr5g044260.1 | PPR containing plant-like protein | HC | chr5:... 132 4e-31
Medtr4g032895.1 | pentatricopeptide (PPR) repeat protein | HC | ... 131 5e-31
Medtr1g012380.1 | PPR containing plant-like protein | HC | chr1:... 131 8e-31
Medtr2g048855.1 | pentatricopeptide (PPR) repeat protein | HC | ... 130 2e-30
Medtr1g007610.1 | pentatricopeptide (PPR) repeat protein | HC | ... 130 2e-30
Medtr7g105440.1 | PPR containing plant-like protein | HC | chr7:... 130 2e-30
Medtr3g052720.1 | organelle transcript processing protein, putat... 129 3e-30
Medtr2g013500.1 | PPR containing plant-like protein | HC | chr2:... 129 4e-30
Medtr3g080230.1 | PPR containing plant-like protein | HC | chr3:... 128 6e-30
Medtr3g080230.2 | PPR containing plant-like protein | HC | chr3:... 128 6e-30
Medtr8g098250.1 | PPR containing plant-like protein | HC | chr8:... 128 6e-30
Medtr8g074780.1 | PPR containing plant-like protein | HC | chr8:... 127 7e-30
Medtr8g105720.1 | PPR containing plant-like protein | HC | chr8:... 127 8e-30
Medtr4g131300.1 | PPR containing plant-like protein | HC | chr4:... 127 1e-29
Medtr5g006570.1 | pentatricopeptide (PPR) repeat protein | HC | ... 127 1e-29
Medtr3g096440.1 | PPR containing plant-like protein | HC | chr3:... 127 2e-29
Medtr4g085110.1 | pentatricopeptide (PPR) repeat protein | HC | ... 126 2e-29
Medtr5g020650.1 | PPR containing plant-like protein | HC | chr5:... 126 2e-29
Medtr8g068150.1 | SLOW growth protein, putative | HC | chr8:2840... 125 3e-29
Medtr1g073160.1 | PPR containing plant-like protein | HC | chr1:... 125 3e-29
Medtr8g028890.1 | PPR containing plant-like protein | HC | chr8:... 125 3e-29
Medtr1g052100.1 | PPR containing plant-like protein | HC | chr1:... 125 3e-29
Medtr3g045450.1 | pentatricopeptide (PPR) repeat protein | HC | ... 125 4e-29
Medtr1g059720.1 | organelle transcript processing protein, putat... 125 5e-29
Medtr7g417770.1 | PPR containing plant-like protein | HC | chr7:... 125 5e-29
Medtr7g017700.1 | PPR containing plant-like protein | HC | chr7:... 125 5e-29
Medtr7g108530.1 | PPR containing plant-like protein | HC | chr7:... 125 6e-29
Medtr7g105540.1 | PPR containing plant-like protein | HC | chr7:... 124 7e-29
Medtr7g037430.1 | pentatricopeptide (PPR) repeat protein | LC | ... 124 7e-29
Medtr3g089880.1 | pentatricopeptide (PPR) repeat protein | HC | ... 124 7e-29
Medtr7g005870.1 | PPR containing plant-like protein | HC | chr7:... 124 8e-29
Medtr6g032915.1 | pentatricopeptide (PPR) repeat protein | HC | ... 124 1e-28
Medtr8g102760.1 | PPR containing plant-like protein | HC | chr8:... 123 2e-28
Medtr7g083820.1 | pentatricopeptide (PPR) repeat protein | HC | ... 123 2e-28
Medtr7g083820.2 | pentatricopeptide (PPR) repeat protein | HC | ... 123 2e-28
Medtr5g049780.1 | pentatricopeptide (PPR) repeat protein | HC | ... 122 2e-28
Medtr3g006800.1 | pentatricopeptide (PPR) repeat protein | HC | ... 122 2e-28
Medtr4g088840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 122 2e-28
Medtr8g479320.2 | PPR containing plant-like protein | HC | chr8:... 122 3e-28
Medtr8g479320.1 | PPR containing plant-like protein | HC | chr8:... 122 3e-28
Medtr8g107740.1 | pentatricopeptide (PPR) repeat protein | HC | ... 122 4e-28
Medtr7g076350.1 | pentatricopeptide (PPR) repeat protein | HC | ... 122 4e-28
Medtr5g031490.1 | pentatricopeptide (PPR) repeat protein | HC | ... 122 4e-28
Medtr5g043780.1 | PPR containing plant-like protein | HC | chr5:... 122 5e-28
Medtr3g105370.2 | pentatricopeptide (PPR) repeat protein | HC | ... 121 5e-28
Medtr3g105370.1 | pentatricopeptide (PPR) repeat protein | HC | ... 121 5e-28
Medtr3g105370.3 | pentatricopeptide (PPR) repeat protein | HC | ... 121 5e-28
Medtr4g130500.1 | pentatricopeptide (PPR) repeat protein | HC | ... 121 6e-28
Medtr7g100810.1 | pentatricopeptide (PPR) repeat protein | HC | ... 121 6e-28
Medtr6g018720.1 | PPR containing plant-like protein | HC | chr6:... 121 7e-28
Medtr3g037470.1 | TPR superfamily protein | HC | chr3:13772234-1... 121 7e-28
Medtr3g072900.1 | PPR containing plant-like protein | HC | chr3:... 121 7e-28
Medtr5g091640.1 | PPR containing plant-like protein | HC | chr5:... 121 8e-28
Medtr7g053240.1 | pentatricopeptide (PPR) repeat protein | HC | ... 121 8e-28
Medtr7g078360.1 | PPR containing plant-like protein | HC | chr7:... 121 8e-28
Medtr1g114220.1 | PPR containing plant-like protein | HC | chr1:... 120 1e-27
Medtr6g060510.1 | pentatricopeptide (PPR) repeat protein | HC | ... 120 1e-27
Medtr7g092100.1 | RNAediting factor 1 | HC | chr7:36467361-36465... 120 1e-27
Medtr2g087120.1 | PPR containing plant-like protein | HC | chr2:... 120 1e-27
Medtr5g008600.1 | pentatricopeptide (PPR) repeat protein | HC | ... 120 1e-27
Medtr2g009760.1 | PPR containing plant-like protein | HC | chr2:... 120 1e-27
Medtr1g111020.2 | pentatricopeptide (PPR) repeat protein | HC | ... 120 2e-27
Medtr7g011100.1 | pentatricopeptide (PPR) repeat protein | HC | ... 120 2e-27
Medtr4g108890.1 | PPR containing plant-like protein | HC | chr4:... 120 2e-27
Medtr3g096420.1 | PPR containing plant-like protein | HC | chr3:... 120 2e-27
Medtr3g026690.1 | PPR containing plant-like protein | HC | chr3:... 120 2e-27
Medtr1g040000.1 | PPR containing plant-like protein | HC | chr1:... 119 2e-27
Medtr8g065730.2 | PPR containing plant-like protein | HC | chr8:... 119 2e-27
Medtr8g065730.1 | PPR containing plant-like protein | HC | chr8:... 119 2e-27
Medtr4g068900.1 | PPR containing plant-like protein | HC | chr4:... 119 2e-27
Medtr1g111020.1 | pentatricopeptide (PPR) repeat protein | HC | ... 119 3e-27
Medtr7g078420.1 | PPR containing plant-like protein | HC | chr7:... 119 3e-27
Medtr1g071240.1 | pentatricopeptide (PPR) repeat protein | HC | ... 119 3e-27
Medtr2g016780.1 | editing factor, putative | HC | chr2:5197710-5... 119 3e-27
Medtr3g012530.1 | pentatricopeptide (PPR) repeat protein | HC | ... 119 4e-27
Medtr5g043920.1 | PPR containing plant-like protein | HC | chr5:... 119 4e-27
Medtr4g023510.1 | PPR containing plant-like protein | HC | chr4:... 118 5e-27
Medtr7g084830.1 | PPR containing plant-like protein | HC | chr7:... 118 5e-27
Medtr1g040635.1 | pentatricopeptide (PPR) repeat protein | HC | ... 118 6e-27
Medtr1g059810.1 | pentatricopeptide (PPR) repeat protein | HC | ... 118 6e-27
Medtr2g021710.1 | PPR containing plant-like protein | HC | chr2:... 118 7e-27
Medtr8g069550.1 | PPR containing plant-like protein | HC | chr8:... 117 8e-27
Medtr8g069550.2 | PPR containing plant-like protein | HC | chr8:... 117 8e-27
Medtr7g016960.1 | pentatricopeptide (PPR) repeat protein | HC | ... 117 9e-27
Medtr1g099590.1 | pentatricopeptide (PPR) repeat protein | HC | ... 117 1e-26
Medtr4g094502.1 | pentatricopeptide (PPR) repeat protein | HC | ... 117 1e-26
Medtr3g098230.1 | PPR containing plant-like protein | HC | chr3:... 117 1e-26
Medtr8g027150.1 | PPR containing plant-like protein | HC | chr8:... 117 1e-26
Medtr2g058990.1 | pentatricopeptide (PPR) repeat protein | HC | ... 116 2e-26
Medtr7g056073.1 | basic helix loop helix protein, putative | HC ... 116 2e-26
Medtr2g101710.1 | PPR containing plant protein | HC | chr2:43758... 116 2e-26
Medtr7g079860.1 | pentatricopeptide (PPR) repeat protein | HC | ... 116 2e-26
Medtr4g015760.4 | PPR containing plant-like protein | HC | chr4:... 115 3e-26
Medtr4g015760.1 | PPR containing plant-like protein | HC | chr4:... 115 3e-26
Medtr4g015760.2 | PPR containing plant-like protein | HC | chr4:... 115 3e-26
Medtr4g015760.3 | PPR containing plant-like protein | HC | chr4:... 115 3e-26
Medtr3g063220.1 | PPR containing plant-like protein | HC | chr3:... 115 5e-26
Medtr5g088310.1 | pentatricopeptide (PPR) repeat protein | HC | ... 115 5e-26
Medtr3g434800.1 | pentatricopeptide (PPR) repeat protein | HC | ... 115 6e-26
Medtr8g106950.1 | pentatricopeptide (PPR) repeat protein | HC | ... 115 6e-26
Medtr2g035620.1 | PPR containing plant protein | HC | chr2:15068... 114 8e-26
Medtr7g082690.1 | PPR containing plant-like protein | HC | chr7:... 114 9e-26
Medtr2g049310.1 | PPR containing plant-like protein | HC | chr2:... 114 1e-25
Medtr2g086150.1 | PPR containing plant-like protein | HC | chr2:... 114 1e-25
Medtr8g031210.1 | PPR containing plant-like protein | HC | chr8:... 114 1e-25
Medtr8g031210.3 | PPR containing plant-like protein | HC | chr8:... 114 1e-25
Medtr8g031210.2 | PPR containing plant-like protein | HC | chr8:... 114 1e-25
Medtr3g005330.1 | PPR containing plant-like protein | HC | chr3:... 114 1e-25
Medtr8g087980.1 | PPR containing plant-like protein | HC | chr8:... 113 1e-25
Medtr1g103840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 113 1e-25
Medtr4g006900.1 | PPR containing plant-like protein | HC | chr4:... 113 1e-25
Medtr4g014050.1 | PPR containing plant-like protein | HC | chr4:... 113 2e-25
Medtr6g075280.1 | pentatricopeptide (PPR) repeat protein | HC | ... 113 2e-25
Medtr5g098860.1 | PPR containing plant-like protein | HC | chr5:... 112 3e-25
Medtr4g031160.1 | pentatricopeptide (PPR) repeat protein | HC | ... 112 3e-25
Medtr1g059280.1 | pentatricopeptide (PPR) repeat protein | HC | ... 112 3e-25
Medtr4g095065.1 | pentatricopeptide (PPR) repeat protein | HC | ... 112 3e-25
Medtr3g084440.1 | pentatricopeptide (PPR) repeat protein | HC | ... 112 3e-25
Medtr8g066670.1 | chlororespiratory reduction protein, putative ... 112 3e-25
Medtr3g111500.1 | PPR containing plant-like protein | HC | chr3:... 112 4e-25
Medtr5g023040.1 | pentatricopeptide (PPR) repeat protein | HC | ... 112 5e-25
Medtr8g063290.1 | pentatricopeptide (PPR) repeat protein | HC | ... 112 5e-25
Medtr4g083630.1 | PPR containing plant-like protein | HC | chr4:... 111 6e-25
Medtr8g066250.1 | PPR containing plant-like protein | HC | chr8:... 111 6e-25
Medtr1g103660.1 | PPR containing plant-like protein | HC | chr1:... 110 1e-24
Medtr3g029530.1 | pentatricopeptide (PPR) repeat protein | HC | ... 110 1e-24
Medtr8g096030.1 | PPR containing plant-like protein | HC | chr8:... 110 1e-24
Medtr1g083890.1 | PPR containing plant-like protein | HC | chr1:... 110 1e-24
Medtr4g098940.1 | PPR containing plant-like protein | HC | chr4:... 110 1e-24
Medtr2g072010.1 | PPR containing plant-like protein | HC | chr2:... 110 2e-24
Medtr5g040920.1 | pentatricopeptide (PPR) repeat protein | HC | ... 110 2e-24
Medtr3g466010.1 | PPR containing plant-like protein | HC | chr3:... 110 2e-24
Medtr7g011030.1 | pentatricopeptide (PPR) repeat protein | HC | ... 110 2e-24
Medtr5g008840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 109 2e-24
Medtr8g089940.1 | pentatricopeptide (PPR) repeat protein | HC | ... 109 3e-24
Medtr2g094420.1 | PPR containing plant-like protein | HC | chr2:... 109 3e-24
Medtr5g094220.1 | PPR containing plant-like protein | HC | chr5:... 108 3e-24
Medtr2g042550.1 | pentatricopeptide (PPR) repeat protein | HC | ... 108 4e-24
Medtr4g094402.5 | pentatricopeptide (PPR) repeat protein | HC | ... 108 4e-24
Medtr4g094402.4 | pentatricopeptide (PPR) repeat protein | HC | ... 108 4e-24
Medtr4g094402.3 | pentatricopeptide (PPR) repeat protein | HC | ... 108 4e-24
Medtr4g094402.2 | pentatricopeptide (PPR) repeat protein | HC | ... 108 4e-24
Medtr2g087110.1 | pentatricopeptide (PPR) repeat protein | HC | ... 108 5e-24
Medtr1g040585.1 | pentatricopeptide (PPR) repeat protein | HC | ... 108 5e-24
Medtr1g111670.1 | pentatricopeptide (PPR) repeat protein | HC | ... 108 5e-24
Medtr4g113240.1 | pentatricopeptide (PPR) repeat protein | HC | ... 108 6e-24
Medtr0013s0120.1 | pentatricopeptide (PPR) repeat protein | HC |... 108 6e-24
Medtr4g094402.1 | pentatricopeptide (PPR) repeat protein | HC | ... 108 6e-24
Medtr7g074040.1 | pentatricopeptide (PPR) repeat protein | HC | ... 108 7e-24
Medtr4g087150.1 | PPR containing plant-like protein | HC | chr4:... 108 7e-24
Medtr2g019350.1 | PPR containing plant-like protein | HC | chr2:... 107 8e-24
Medtr5g018370.1 | PPR containing plant-like protein | HC | chr5:... 107 9e-24
Medtr6g022140.2 | pentatricopeptide (PPR) repeat protein | HC | ... 107 1e-23
Medtr1g041310.1 | pentatricopeptide (PPR) repeat protein | HC | ... 107 1e-23
Medtr6g059820.1 | PPR containing plant-like protein | HC | chr6:... 107 1e-23
Medtr8g009490.1 | pentatricopeptide (PPR) repeat protein | HC | ... 107 1e-23
Medtr6g022140.1 | pentatricopeptide (PPR) repeat protein | HC | ... 107 1e-23
Medtr6g066360.1 | PPR containing plant-like protein | HC | chr6:... 106 2e-23
Medtr2g436470.1 | pentatricopeptide (PPR) repeat protein | HC | ... 106 2e-23
Medtr4g119420.1 | pentatricopeptide (PPR) repeat protein | HC | ... 106 2e-23
Medtr4g073930.1 | PPR containing plant-like protein | HC | chr4:... 106 2e-23
Medtr0011s0300.1 | PPR containing plant-like protein | HC | scaf... 106 3e-23
Medtr8g088300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 105 4e-23
Medtr8g106910.1 | pentatricopeptide (PPR) repeat protein | HC | ... 105 5e-23
Medtr1g038860.1 | PPR containing plant-like protein | LC | chr1:... 105 5e-23
Medtr7g106930.1 | pentatricopeptide (PPR) repeat protein | HC | ... 105 6e-23
Medtr7g011840.1 | PPR containing plant-like protein | HC | chr7:... 104 8e-23
Medtr2g071810.1 | PPR containing plant-like protein | HC | chr2:... 104 8e-23
Medtr2g026210.1 | PPR containing plant-like protein | HC | chr2:... 104 8e-23
Medtr3g027990.1 | pentatricopeptide (PPR) repeat protein | HC | ... 104 1e-22
Medtr1g039030.1 | pentatricopeptide (PPR) repeat protein | HC | ... 104 1e-22
Medtr4g094692.1 | pentatricopeptide (PPR) repeat protein | HC | ... 103 1e-22
Medtr1g040565.1 | pentatricopeptide (PPR) repeat protein | HC | ... 103 1e-22
Medtr4g099480.1 | pentatricopeptide (PPR) repeat protein | HC | ... 103 1e-22
Medtr2g087200.1 | pentatricopeptide (PPR) repeat protein | HC | ... 103 1e-22
Medtr1g067280.1 | PPR containing plant-like protein | HC | chr1:... 103 1e-22
Medtr1g040535.1 | pentatricopeptide (PPR) repeat protein | LC | ... 103 2e-22
Medtr5g013950.1 | pentatricopeptide (PPR) repeat protein | HC | ... 103 2e-22
Medtr5g027980.1 | pentatricopeptide (PPR) repeat protein | HC | ... 103 2e-22
Medtr1g073300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 103 2e-22
Medtr3g101700.1 | PPR containing plant-like protein | HC | chr3:... 103 2e-22
Medtr7g103230.1 | PPR containing plant-like protein | HC | chr7:... 102 3e-22
Medtr3g088820.1 | PPR containing plant-like protein | HC | chr3:... 102 3e-22
Medtr1g037590.1 | pentatricopeptide (PPR) repeat protein | HC | ... 101 5e-22
Medtr4g064770.1 | pentatricopeptide (PPR) repeat protein | HC | ... 101 6e-22
Medtr2g028240.1 | PPR containing plant-like protein | HC | chr2:... 101 6e-22
Medtr7g111120.1 | PPR containing plant-like protein | HC | chr7:... 101 7e-22
Medtr4g011730.1 | PPR containing plant-like protein | HC | chr4:... 101 8e-22
Medtr3g011920.1 | PPR containing plant-like protein | HC | chr3:... 101 9e-22
Medtr5g025580.1 | PPR containing plant-like protein | HC | chr5:... 100 1e-21
Medtr7g109860.1 | pentatricopeptide (PPR) repeat protein | HC | ... 100 1e-21
Medtr4g108660.1 | PPR containing plant-like protein | HC | chr4:... 100 1e-21
Medtr1g084570.1 | PPR containing plant-like protein | HC | chr1:... 100 1e-21
Medtr8g075460.1 | PPR containing plant-like protein | HC | chr8:... 100 2e-21
Medtr8g035960.1 | PPR containing plant-like protein | HC | chr8:... 100 2e-21
Medtr5g067140.1 | pentatricopeptide (PPR) repeat protein | HC | ... 99 3e-21
Medtr3g088825.1 | PPR containing plant-like protein | HC | chr3:... 99 3e-21
Medtr4g119120.1 | PPR containing plant-like protein | HC | chr4:... 99 5e-21
Medtr7g082550.1 | PPR containing plant-like protein | HC | chr7:... 98 8e-21
Medtr8g065040.1 | PPR containing plant-like protein | HC | chr8:... 98 9e-21
Medtr5g024100.1 | PPR containing plant-like protein | HC | chr5:... 97 1e-20
Medtr4g078750.1 | PPR containing plant-like protein | HC | chr4:... 97 1e-20
Medtr7g113540.1 | PPR containing plant-like protein | HC | chr7:... 97 1e-20
Medtr1g007600.1 | pentatricopeptide (PPR) repeat protein | HC | ... 97 2e-20
Medtr6g012850.1 | pentatricopeptide (PPR) repeat protein | HC | ... 97 2e-20
Medtr3g408390.1 | PPR containing plant-like protein | HC | chr3:... 96 2e-20
Medtr5g008690.1 | PPR containing plant-like protein | HC | chr5:... 96 3e-20
Medtr2g006810.1 | PPR containing plant-like protein | HC | chr2:... 96 4e-20
Medtr6g060470.1 | pentatricopeptide (PPR) repeat protein | HC | ... 96 4e-20
Medtr5g038580.1 | PPR containing plant-like protein | HC | chr5:... 96 4e-20
Medtr3g077200.1 | PPR containing plant-like protein | HC | chr3:... 95 6e-20
Medtr8g089960.1 | pentatricopeptide (PPR) repeat protein | HC | ... 95 8e-20
Medtr3g117620.1 | PPR containing plant-like protein | HC | chr3:... 94 9e-20
Medtr8g027810.1 | pentatricopeptide (PPR) repeat protein | HC | ... 94 9e-20
Medtr1g059280.2 | pentatricopeptide (PPR) repeat protein | HC | ... 94 1e-19
Medtr5g031630.1 | PPR containing plant-like protein, putative | ... 93 2e-19
Medtr5g071190.1 | PPR containing plant-like protein | HC | chr5:... 93 3e-19
Medtr2g015530.1 | pentatricopeptide (PPR) repeat protein | HC | ... 92 5e-19
Medtr4g118700.1 | PPR containing plant-like protein | HC | chr4:... 92 7e-19
Medtr5g022740.1 | PPR containing plant-like protein | HC | chr5:... 91 7e-19
Medtr0493s0010.1 | pentatricopeptide (PPR) repeat protein | HC |... 91 9e-19
Medtr4g094658.1 | pentatricopeptide (PPR) repeat protein | HC | ... 91 1e-18
Medtr2g082550.1 | PPR containing plant-like protein, putative | ... 91 1e-18
Medtr6g016020.1 | PPR containing plant-like protein | HC | chr6:... 90 2e-18
Medtr8g063450.1 | PPR containing plant-like protein | HC | chr8:... 88 7e-18
Medtr4g094645.1 | pentatricopeptide (PPR) repeat protein | HC | ... 87 2e-17
Medtr4g133610.1 | PPR containing plant-like protein | HC | chr4:... 86 3e-17
Medtr4g087150.2 | PPR containing plant-like protein | HC | chr4:... 86 3e-17
Medtr2g007570.1 | PPR containing plant-like protein | HC | chr2:... 86 4e-17
Medtr3g088835.1 | PPR containing plant-like protein | HC | chr3:... 84 1e-16
Medtr5g012660.1 | PPR containing plant-like protein | HC | chr5:... 84 1e-16
Medtr4g108030.1 | PPR containing plant-like protein | HC | chr4:... 83 3e-16
Medtr4g074470.1 | PPR containing plant-like protein | HC | chr4:... 82 4e-16
Medtr3g053350.1 | PPR containing plant-like protein | HC | chr3:... 80 2e-15
Medtr3g053350.2 | PPR containing plant-like protein | HC | chr3:... 80 2e-15
Medtr5g008260.1 | pentatricopeptide (PPR) repeat protein | HC | ... 76 2e-14
Medtr5g025200.1 | PPR repeat protein | HC | chr5:10223562-102249... 76 3e-14
Medtr4g084680.1 | PPR containing plant-like protein | HC | chr4:... 75 6e-14
Medtr5g095130.1 | PPR containing plant-like protein | HC | chr5:... 75 7e-14
Medtr2g061460.1 | pentatricopeptide (PPR) repeat protein | HC | ... 74 1e-13
Medtr5g008300.1 | PPR containing plant-like protein | HC | chr5:... 74 2e-13
Medtr6g471100.1 | pentatricopeptide (PPR) repeat protein | LC | ... 73 3e-13
Medtr7g076550.1 | pentatricopeptide (PPR) repeat protein | HC | ... 72 5e-13
Medtr5g031740.1 | PPR containing plant-like protein | HC | chr5:... 71 9e-13
Medtr5g090210.1 | PPR containing plant-like protein | HC | chr5:... 70 2e-12
Medtr8g105170.1 | PPR containing plant-like protein | LC | chr8:... 70 2e-12
Medtr6g065540.1 | pentatricopeptide (PPR) repeat protein | HC | ... 70 2e-12
Medtr5g068510.1 | PPR containing plant-like protein | HC | chr5:... 70 2e-12
Medtr0054s0140.1 | pentatricopeptide (PPR) repeat protein | LC |... 69 4e-12
Medtr8g039270.1 | PPR containing plant-like protein | HC | chr8:... 69 6e-12
Medtr6g079310.1 | pentatricopeptide (PPR) repeat protein | HC | ... 67 2e-11
Medtr6g079830.1 | pentatricopeptide (PPR) repeat protein | LC | ... 66 3e-11
Medtr1g050495.1 | pentatricopeptide (PPR) repeat protein | LC | ... 65 6e-11
Medtr1g033960.1 | PPR containing plant-like protein | HC | chr1:... 65 7e-11
Medtr2g099400.1 | PPR superfamily protein | HC | chr2:42618637-4... 65 7e-11
Medtr3g105900.1 | proton gradient regulation protein | HC | chr3... 65 9e-11
Medtr7g017570.1 | PPR containing plant protein | HC | chr7:56046... 65 9e-11
Medtr6g079920.1 | pentatricopeptide (PPR) repeat protein | LC | ... 64 1e-10
Medtr4g107210.1 | PPR containing plant-like protein | HC | chr4:... 64 1e-10
Medtr6g079210.1 | pentatricopeptide (PPR) repeat protein | HC | ... 64 2e-10
Medtr6g079180.1 | pentatricopeptide (PPR) repeat protein | HC | ... 64 2e-10
Medtr1g045850.1 | pentatricopeptide (PPR) repeat protein | LC | ... 64 2e-10
Medtr2g035630.1 | pentatricopeptide (PPR) repeat protein | HC | ... 64 2e-10
Medtr6g092220.1 | PPR containing plant-like protein | HC | chr6:... 63 2e-10
Medtr6g079220.1 | pentatricopeptide (PPR) repeat protein | LC | ... 63 3e-10
Medtr6g072030.1 | pentatricopeptide (PPR) repeat protein | HC | ... 63 4e-10
Medtr5g029690.1 | PPR containing plant-like protein | HC | chr5:... 62 6e-10
Medtr7g044790.1 | PPR containing plant-like protein | HC | chr7:... 62 7e-10
Medtr5g090170.1 | PPR containing plant-like protein | HC | chr5:... 62 7e-10
Medtr5g090170.4 | PPR containing plant-like protein | HC | chr5:... 62 8e-10
Medtr5g090170.2 | PPR containing plant-like protein | HC | chr5:... 62 8e-10
Medtr5g090170.3 | PPR containing plant-like protein | HC | chr5:... 62 8e-10
Medtr5g090170.5 | PPR containing plant-like protein | HC | chr5:... 62 8e-10
Medtr5g090170.6 | PPR containing plant-like protein | HC | chr5:... 62 8e-10
Medtr2g023220.1 | PPR containing plant-like protein | HC | chr2:... 62 8e-10
Medtr5g077930.1 | PPR containing plant-like protein | HC | chr5:... 61 8e-10
Medtr6g077800.1 | pentatricopeptide (PPR) repeat protein | LC | ... 61 1e-09
Medtr8g107050.2 | pentatricopeptide (PPR) repeat protein | LC | ... 61 1e-09
Medtr6g077540.1 | pentatricopeptide (PPR) repeat protein | HC | ... 61 1e-09
Medtr5g043790.1 | PPR repeat protein | LC | chr5:19242401-192435... 61 1e-09
Medtr0237s0070.1 | pentatricopeptide (PPR) repeat protein | LC |... 61 1e-09
Medtr7g017530.1 | PPR containing plant protein | HC | chr7:55963... 61 1e-09
Medtr8g107050.1 | pentatricopeptide (PPR) repeat protein | LC | ... 60 1e-09
Medtr6g079380.1 | pentatricopeptide (PPR) repeat protein | LC | ... 60 1e-09
Medtr7g067460.1 | TCP-1/cpn60 chaperonin family protein | HC | c... 60 2e-09
Medtr7g024140.1 | PPR containing plant-like protein, putative | ... 60 2e-09
Medtr7g091470.1 | PPR containing plant-like protein | HC | chr7:... 60 2e-09
Medtr6g022260.1 | PPR containing plant-like protein | HC | chr6:... 60 2e-09
Medtr6g069840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 60 2e-09
Medtr6g092170.1 | PPR containing plant-like protein | HC | chr6:... 60 2e-09
Medtr6g069840.3 | pentatricopeptide (PPR) repeat protein | HC | ... 60 2e-09
Medtr6g069840.2 | pentatricopeptide (PPR) repeat protein | HC | ... 60 2e-09
Medtr6g082970.1 | pentatricopeptide (PPR) repeat protein | LC | ... 60 3e-09
Medtr6g091880.1 | PPR containing plant-like protein | HC | chr6:... 60 3e-09
Medtr6g079960.1 | pentatricopeptide (PPR) repeat protein, putati... 59 3e-09
Medtr1g008310.1 | PPR containing plant-like protein | HC | chr1:... 59 3e-09
Medtr4g068360.1 | PPR containing plant-like protein | HC | chr4:... 59 3e-09
Medtr4g107180.1 | pentatricopeptide (PPR) repeat protein | LC | ... 59 4e-09
Medtr1g066900.1 | PPR containing plant-like protein | HC | chr1:... 59 4e-09
Medtr6g078160.1 | pentatricopeptide (PPR) repeat protein | HC | ... 59 4e-09
Medtr8g054410.2 | PPR containing plant-like protein | HC | chr8:... 59 4e-09
Medtr8g054410.1 | PPR containing plant-like protein | HC | chr8:... 59 4e-09
Medtr2g049740.1 | PPR containing plant-like protein | HC | chr2:... 59 4e-09
Medtr6g045263.1 | PPR containing plant-like protein | HC | chr6:... 59 5e-09
Medtr3g037490.1 | PPR containing plant-like protein | HC | chr3:... 59 5e-09
Medtr6g045263.2 | PPR containing plant-like protein | HC | chr6:... 59 5e-09
Medtr8g070050.1 | pentatricopeptide (PPR) repeat protein | HC | ... 59 5e-09
Medtr0654s0010.1 | pentatricopeptide (PPR) repeat protein | HC |... 59 6e-09
Medtr0308s0020.1 | pentatricopeptide (PPR) repeat protein | LC |... 58 7e-09
Medtr2g041700.1 | PPR containing plant-like protein | HC | chr2:... 58 8e-09
Medtr6g034150.1 | PPR containing plant-like protein | HC | chr6:... 58 8e-09
Medtr6g079250.1 | pentatricopeptide (PPR) repeat protein | HC | ... 58 9e-09
Medtr4g108650.1 | PPR containing plant-like protein | HC | chr4:... 58 9e-09
Medtr6g069180.1 | pentatricopeptide (PPR) repeat protein | LC | ... 58 1e-08
Medtr6g069180.2 | pentatricopeptide (PPR) repeat protein | LC | ... 58 1e-08
Medtr2g036560.1 | PPR containing plant-like protein | HC | chr2:... 58 1e-08
Medtr3g088505.3 | PPR containing plant-like protein | HC | chr3:... 58 1e-08
Medtr3g088505.1 | PPR containing plant-like protein | HC | chr3:... 58 1e-08
Medtr3g088505.2 | PPR containing plant-like protein | HC | chr3:... 58 1e-08
Medtr3g088505.4 | PPR containing plant-like protein | HC | chr3:... 58 1e-08
Medtr6g079240.1 | pentatricopeptide (PPR) repeat protein | HC | ... 58 1e-08
Medtr3g061000.1 | pentatricopeptide (PPR) repeat protein | LC | ... 58 1e-08
Medtr6g079300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 58 1e-08
Medtr7g451470.1 | PPR containing plant-like protein | LC | chr7:... 57 1e-08
Medtr8g103480.2 | PPR containing plant-like protein | HC | chr8:... 57 1e-08
Medtr8g103480.1 | PPR containing plant-like protein | HC | chr8:... 57 1e-08
Medtr1g100593.1 | PPR containing plant-like protein | HC | chr1:... 57 1e-08
Medtr1g100593.2 | PPR containing plant-like protein | HC | chr1:... 57 1e-08
Medtr5g039750.1 | PPR containing plant-like protein | LC | chr5:... 57 2e-08
Medtr7g091410.4 | PPR containing plant-like protein | HC | chr7:... 57 2e-08
Medtr7g091410.3 | PPR containing plant-like protein | HC | chr7:... 57 2e-08
Medtr7g091410.2 | PPR containing plant-like protein | HC | chr7:... 57 2e-08
Medtr0110s0060.1 | pentatricopeptide (PPR) repeat protein | HC |... 57 2e-08
Medtr1g112240.1 | PPR containing plant-like protein | HC | chr1:... 57 2e-08
Medtr1g031720.1 | PPR containing plant-like protein | LC | chr1:... 57 2e-08
Medtr4g098660.1 | pentatricopeptide (PPR) repeat protein | HC | ... 57 2e-08
Medtr7g091410.1 | PPR containing plant-like protein | HC | chr7:... 57 3e-08
Medtr6g068790.1 | pentatricopeptide (PPR) repeat protein | LC | ... 56 3e-08
Medtr0019s0210.3 | pentatricopeptide (PPR) repeat protein | LC |... 56 3e-08
Medtr0019s0210.2 | pentatricopeptide (PPR) repeat protein | LC |... 56 3e-08
Medtr0019s0210.1 | pentatricopeptide (PPR) repeat protein | LC |... 56 3e-08
Medtr8g070060.1 | pentatricopeptide (PPR) repeat protein | HC | ... 56 3e-08
Medtr1g114300.1 | PPR containing plant-like protein | HC | chr1:... 56 3e-08
Medtr4g089005.1 | pentatricopeptide (PPR) repeat protein | HC | ... 56 3e-08
Medtr6g080210.1 | pentatricopeptide (PPR) repeat protein | HC | ... 56 3e-08
Medtr6g080200.1 | pentatricopeptide (PPR) repeat protein | HC | ... 56 4e-08
Medtr6g080200.2 | pentatricopeptide (PPR) repeat protein | HC | ... 56 4e-08
Medtr5g007250.1 | PPR containing plant-like protein | HC | chr5:... 56 4e-08
Medtr7g012890.1 | pentatricopeptide (PPR) repeat protein | LC | ... 56 4e-08
Medtr5g089850.1 | PPR containing protein | HC | chr5:39081850-39... 56 4e-08
Medtr8g080940.1 | PPR containing plant-like protein | HC | chr8:... 56 4e-08
Medtr7g090340.1 | PPR containing plant-like protein | HC | chr7:... 55 4e-08
Medtr8g080940.2 | PPR containing plant-like protein | HC | chr8:... 55 5e-08
Medtr4g076540.1 | PPR containing plant-like protein | HC | chr4:... 55 5e-08
Medtr3g088950.1 | pentatricopeptide (PPR) repeat protein, putati... 55 5e-08
Medtr5g077220.1 | PPR containing plant-like protein | HC | chr5:... 55 5e-08
Medtr6g079440.1 | RNA processing factor 2, putative | HC | chr6:... 55 5e-08
Medtr2g026645.1 | pentatricopeptide (PPR) repeat protein | HC | ... 55 7e-08
Medtr6g478210.1 | pentatricopeptide (PPR) repeat protein | HC | ... 55 7e-08
Medtr4g040410.1 | PPR containing plant-like protein | HC | chr4:... 55 7e-08
Medtr6g079890.1 | pentatricopeptide (PPR) repeat protein | LC | ... 55 8e-08
Medtr8g064830.1 | pentatricopeptide (PPR) repeat protein | HC | ... 55 9e-08
Medtr4g075270.1 | PPR containing plant-like protein | HC | chr4:... 54 1e-07
Medtr8g071300.1 | PPR containing plant-like protein | HC | chr8:... 54 1e-07
Medtr5g039700.1 | PPR containing plant-like protein | HC | chr5:... 54 1e-07
Medtr1g080110.1 | pentatricopeptide (PPR) repeat protein | HC | ... 54 1e-07
Medtr8g071970.1 | PPR containing plant-like protein | HC | chr8:... 54 1e-07
Medtr6g460480.1 | organelle transcript processing protein, putat... 54 1e-07
Medtr4g086270.1 | PPR containing plant-like protein | HC | chr4:... 54 2e-07
Medtr1g048080.1 | pentatricopeptide (PPR) repeat protein | HC | ... 54 2e-07
Medtr5g006640.1 | PPR containing plant-like protein | HC | chr5:... 54 2e-07
Medtr6g079590.1 | pentatricopeptide (PPR) repeat protein | LC | ... 54 2e-07
Medtr2g437460.1 | pentatricopeptide (PPR) repeat protein | HC | ... 54 2e-07
Medtr0573s0020.1 | pentatricopeptide (PPR) repeat protein | HC |... 54 2e-07
Medtr1g095880.1 | PPR containing plant-like protein | HC | chr1:... 53 2e-07
Medtr0014s0250.1 | pentatricopeptide (PPR) repeat protein | LC |... 53 2e-07
Medtr3g091460.1 | PPR containing plant-like protein | HC | chr3:... 53 2e-07
Medtr8g089700.1 | PPR containing plant-like protein | HC | chr8:... 53 3e-07
Medtr8g083130.1 | pentatricopeptide (PPR) repeat protein | HC | ... 53 3e-07
Medtr2g021850.1 | PPR containing plant-like protein | HC | chr2:... 53 3e-07
Medtr6g078190.1 | pentatricopeptide (PPR) repeat protein | LC | ... 53 4e-07
Medtr6g478130.1 | pentatricopeptide (PPR) repeat protein | HC | ... 52 4e-07
Medtr2g035450.1 | PPR containing plant-like protein | HC | chr2:... 52 4e-07
Medtr3g034990.2 | pentatricopeptide (PPR) repeat protein | LC | ... 52 4e-07
Medtr3g034990.1 | pentatricopeptide (PPR) repeat protein | LC | ... 52 4e-07
Medtr1g029490.1 | pentatricopeptide (PPR) repeat protein | LC | ... 52 4e-07
Medtr6g078210.1 | pentatricopeptide (PPR) repeat protein | LC | ... 52 4e-07
Medtr2g103520.1 | PPR containing plant-like protein | HC | chr2:... 52 5e-07
Medtr5g018230.2 | PPR containing plant-like protein | HC | chr5:... 52 5e-07
Medtr5g018230.1 | PPR containing plant-like protein | HC | chr5:... 52 5e-07
Medtr3g448620.1 | pentatricopeptide (PPR) repeat protein | LC | ... 52 7e-07
Medtr6g080040.1 | pentatricopeptide (PPR) repeat protein | HC | ... 52 8e-07
Medtr3g115270.1 | PPR containing plant-like protein | HC | chr3:... 51 9e-07
Medtr3g115270.2 | PPR containing plant-like protein | HC | chr3:... 51 9e-07
Medtr3g091500.1 | pentatricopeptide (PPR) repeat protein | LC | ... 51 1e-06
Medtr6g065560.1 | PPR containing plant-like protein | LC | chr6:... 51 1e-06
Medtr1g035250.1 | PPR containing plant-like protein | HC | chr1:... 51 1e-06
Medtr1g068960.1 | PPR containing plant-like protein | HC | chr1:... 51 1e-06
Medtr1g113010.1 | PPR containing plant-like protein | HC | chr1:... 50 1e-06
Medtr0014s0210.1 | pentatricopeptide (PPR) repeat protein | LC |... 50 2e-06
Medtr0051s0090.1 | pentatricopeptide (PPR) repeat protein | LC |... 50 2e-06
Medtr1g055295.1 | PPR containing plant-like protein | HC | chr1:... 50 2e-06
Medtr7g016910.1 | pentatricopeptide (PPR) repeat protein | HC | ... 50 2e-06
Medtr6g061120.1 | pentatricopeptide (PPR) repeat protein | HC | ... 50 2e-06
Medtr2g037740.1 | PPR containing plant-like protein | HC | chr2:... 50 2e-06
Medtr6g445320.1 | pentatricopeptide (PPR) repeat protein | LC | ... 50 2e-06
Medtr2g018550.1 | pentatricopeptide (PPR) repeat protein | HC | ... 50 2e-06
Medtr7g025610.1 | PPR containing plant-like protein, putative | ... 50 3e-06
Medtr4g133740.1 | pentatricopeptide (PPR) repeat protein | HC | ... 49 4e-06
Medtr8g098755.1 | PPR containing plant-like protein | HC | chr8:... 49 4e-06
Medtr8g015530.1 | PPR repeat protein | LC | chr8:5078258-5077407... 49 4e-06
Medtr2g100200.2 | PPR containing plant-like protein | HC | chr2:... 49 4e-06
Medtr2g100200.1 | PPR containing plant-like protein | HC | chr2:... 49 4e-06
Medtr0014s0180.1 | pentatricopeptide (PPR) repeat protein | LC |... 49 5e-06
Medtr5g033780.1 | PPR domain protein | HC | chr5:14574724-145743... 49 5e-06
Medtr0014s0260.1 | pentatricopeptide (PPR) repeat protein | LC |... 48 8e-06
Medtr2g094423.1 | PPR containing plant-like protein | LC | chr2:... 48 1e-05
>Medtr4g074150.2 | PPR containing plant-like protein | HC |
chr4:28198214-28202779 | 20130731
Length = 606
Score = 360 bits (923), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 177/262 (67%), Positives = 211/262 (80%), Gaps = 6/262 (2%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVED---PFMIYAQIFKLGFDLDRFAGNALISAFANS 57
M + GV+PD+HTFPLLLK+FSK V + PFM+YAQ+FKLGFD D F N ISAF S
Sbjct: 95 MHEMGVQPDKHTFPLLLKIFSKNGVPNDHLPFMVYAQVFKLGFDHDCFVCNGFISAFGCS 154
Query: 58 GFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVL 117
GF+ +AC+VFDES +DI+AWTALING+VKN +P EAL+CFV+MR G +D TV SVL
Sbjct: 155 GFMKNACKVFDESPERDIVAWTALINGFVKNGVPGEALRCFVEMRLKGVVIDGFTVASVL 214
Query: 118 RAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYR 177
RAAA+ GD FGK VHGFYV+ GRV LDG V+ AL+DMYFKCG+C+DACKVFDEMP YR
Sbjct: 215 RAAALVGDYCFGKRVHGFYVETGRVVLDGSVYCALVDMYFKCGYCEDACKVFDEMP--YR 272
Query: 178 DVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVH 237
DVV W+V+VAG+VQC K+QDA+ F ML DNVVPNEFTLTSVLSACAH GALDQG+LVH
Sbjct: 273 DVVAWTVVVAGFVQCKKYQDALSFFRRMLLDNVVPNEFTLTSVLSACAHVGALDQGRLVH 332
Query: 238 QYIECKKVSLNSVELGTALVDM 259
+Y+E +LN+V LGT+LVDM
Sbjct: 333 RYMEHNDCNLNAV-LGTSLVDM 353
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 99/186 (53%), Gaps = 3/186 (1%)
Query: 49 ALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGV 108
AL+ + G+ AC+VFDE +D++AWT ++ G+V+ +AL F +M
Sbjct: 248 ALVDMYFKCGYCEDACKVFDEMPYRDVVAWTVVVAGFVQCKKYQDALSFFRRMLLDNVVP 307
Query: 109 DALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKV 168
+ T+ SVL A A G + G+ VH Y++ L+ + ++L+DMY KCG D A V
Sbjct: 308 NEFTLTSVLSACAHVGALDQGRLVHR-YMEHNDCNLNAVLGTSLVDMYAKCGCVDKALMV 366
Query: 169 FDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSG 228
F+ + ++V W+ ++ G A+ +F ML + PN+ T VL AC+H G
Sbjct: 367 FENL--QVKNVHTWTAMINGLAVHGDALGALNIFSRMLESGLRPNDVTFLGVLGACSHGG 424
Query: 229 ALDQGK 234
+D+GK
Sbjct: 425 FVDEGK 430
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 65/133 (48%)
Query: 41 DLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVK 100
+L+ G +L+ +A G + A VF+ VK++ WTA+ING + AL F +
Sbjct: 341 NLNAVLGTSLVDMYAKCGCVDKALMVFENLQVKNVHTWTAMINGLAVHGDALGALNIFSR 400
Query: 101 MRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCG 160
M +G + +T + VL A + G + GK + ++ + + ++D+ + G
Sbjct: 401 MLESGLRPNDVTFLGVLGACSHGGFVDEGKKLFEMMRHTYHLKPNMEHYGCMVDLLGRAG 460
Query: 161 HCDDACKVFDEMP 173
+DA ++ D MP
Sbjct: 461 CLEDAKQIIDNMP 473
>Medtr4g074150.1 | PPR containing plant-like protein | HC |
chr4:28198256-28202779 | 20130731
Length = 606
Score = 360 bits (923), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 177/262 (67%), Positives = 211/262 (80%), Gaps = 6/262 (2%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVED---PFMIYAQIFKLGFDLDRFAGNALISAFANS 57
M + GV+PD+HTFPLLLK+FSK V + PFM+YAQ+FKLGFD D F N ISAF S
Sbjct: 95 MHEMGVQPDKHTFPLLLKIFSKNGVPNDHLPFMVYAQVFKLGFDHDCFVCNGFISAFGCS 154
Query: 58 GFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVL 117
GF+ +AC+VFDES +DI+AWTALING+VKN +P EAL+CFV+MR G +D TV SVL
Sbjct: 155 GFMKNACKVFDESPERDIVAWTALINGFVKNGVPGEALRCFVEMRLKGVVIDGFTVASVL 214
Query: 118 RAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYR 177
RAAA+ GD FGK VHGFYV+ GRV LDG V+ AL+DMYFKCG+C+DACKVFDEMP YR
Sbjct: 215 RAAALVGDYCFGKRVHGFYVETGRVVLDGSVYCALVDMYFKCGYCEDACKVFDEMP--YR 272
Query: 178 DVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVH 237
DVV W+V+VAG+VQC K+QDA+ F ML DNVVPNEFTLTSVLSACAH GALDQG+LVH
Sbjct: 273 DVVAWTVVVAGFVQCKKYQDALSFFRRMLLDNVVPNEFTLTSVLSACAHVGALDQGRLVH 332
Query: 238 QYIECKKVSLNSVELGTALVDM 259
+Y+E +LN+V LGT+LVDM
Sbjct: 333 RYMEHNDCNLNAV-LGTSLVDM 353
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 99/186 (53%), Gaps = 3/186 (1%)
Query: 49 ALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGV 108
AL+ + G+ AC+VFDE +D++AWT ++ G+V+ +AL F +M
Sbjct: 248 ALVDMYFKCGYCEDACKVFDEMPYRDVVAWTVVVAGFVQCKKYQDALSFFRRMLLDNVVP 307
Query: 109 DALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKV 168
+ T+ SVL A A G + G+ VH Y++ L+ + ++L+DMY KCG D A V
Sbjct: 308 NEFTLTSVLSACAHVGALDQGRLVHR-YMEHNDCNLNAVLGTSLVDMYAKCGCVDKALMV 366
Query: 169 FDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSG 228
F+ + ++V W+ ++ G A+ +F ML + PN+ T VL AC+H G
Sbjct: 367 FENL--QVKNVHTWTAMINGLAVHGDALGALNIFSRMLESGLRPNDVTFLGVLGACSHGG 424
Query: 229 ALDQGK 234
+D+GK
Sbjct: 425 FVDEGK 430
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 65/133 (48%)
Query: 41 DLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVK 100
+L+ G +L+ +A G + A VF+ VK++ WTA+ING + AL F +
Sbjct: 341 NLNAVLGTSLVDMYAKCGCVDKALMVFENLQVKNVHTWTAMINGLAVHGDALGALNIFSR 400
Query: 101 MRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCG 160
M +G + +T + VL A + G + GK + ++ + + ++D+ + G
Sbjct: 401 MLESGLRPNDVTFLGVLGACSHGGFVDEGKKLFEMMRHTYHLKPNMEHYGCMVDLLGRAG 460
Query: 161 HCDDACKVFDEMP 173
+DA ++ D MP
Sbjct: 461 CLEDAKQIIDNMP 473
>Medtr2g036960.1 | PPR containing plant-like protein | HC |
chr2:16044626-16048085 | 20130731
Length = 702
Score = 167 bits (424), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 93/261 (35%), Positives = 153/261 (58%), Gaps = 6/261 (2%)
Query: 1 MRQKGVEPDQHTFPLL-LKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M+ + P+ TFP + L + + + + ++FKLG D D N++++ + G
Sbjct: 108 MKTLNISPNNFTFPFVFLACANLEEIRMARLAHCEVFKLGLDNDHHTVNSMVTMYFRCGE 167
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMR-STGTGVDALTVVSVLR 118
G A +VFDE + KD+++W +L++GY K EA++ F ++R +G D +++VSVL
Sbjct: 168 NGVARKVFDEITEKDLVSWNSLLSGYAKLGFAREAVEVFGRLREESGFEPDEMSLVSVLG 227
Query: 119 AAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRD 178
A GD G+WV GF V+ G ++++ Y+ SAL+ MY KCG + ++FD MP RD
Sbjct: 228 ACGELGDLELGRWVEGFVVERG-MKVNSYIGSALISMYSKCGELVSSRRIFDGMP--SRD 284
Query: 179 VVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQ 238
+ W+ ++ Y Q +AI +F +M + V PN+ TLT+VLSACA GALD GK + +
Sbjct: 285 FITWNAAISAYAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSACASIGALDLGKQMDE 344
Query: 239 YIECKKVSLNSVELGTALVDM 259
Y + + + + + TAL+DM
Sbjct: 345 YATHRGLQ-HDIFVATALIDM 364
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 114/201 (56%), Gaps = 5/201 (2%)
Query: 35 IFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEA 94
+ + G ++ + G+ALIS ++ G + S+ ++FD +D I W A I+ Y +N + EA
Sbjct: 245 VVERGMKVNSYIGSALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEA 304
Query: 95 LKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMD 154
+ F M+ G + +T+ +VL A A G + GK + + G +Q D +V +AL+D
Sbjct: 305 ISLFHSMKENGVDPNKVTLTAVLSACASIGALDLGKQMDEYATHRG-LQHDIFVATALID 363
Query: 155 MYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSD--NVVP 212
MY KCG + A +VF++MP ++ W+ +++ K ++A+ +F M + + P
Sbjct: 364 MYAKCGSLESAQRVFNDMP--RKNDASWNAMISALASHGKAKEALSLFERMSDEGGSARP 421
Query: 213 NEFTLTSVLSACAHSGALDQG 233
N+ T S+LSAC H+G +D+G
Sbjct: 422 NDITFVSLLSACVHAGLVDEG 442
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 82/183 (44%), Gaps = 17/183 (9%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVED---PFMIYAQIFKLGFDLDRFAGNALISAFANS 57
M++ GV+P++ T +L + D YA G D F ALI +A
Sbjct: 311 MKENGVDPNKVTLTAVLSACASIGALDLGKQMDEYAT--HRGLQHDIFVATALIDMYAKC 368
Query: 58 GFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGV--DALTVVS 115
G + SA +VF++ K+ +W A+I+ + EAL F +M G + +T VS
Sbjct: 369 GSLESAQRVFNDMPRKNDASWNAMISALASHGKAKEALSLFERMSDEGGSARPNDITFVS 428
Query: 116 VLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYV-----WSALMDMYFKCGHCDDACKVFD 170
+L A AG + G+ + L G V +S ++D+ + GH +A V +
Sbjct: 429 LLSACVHAGLVD-----EGYRLFDMMSTLFGLVPKIEHYSCMVDLLSRAGHLYEAWDVIE 483
Query: 171 EMP 173
+MP
Sbjct: 484 KMP 486
>Medtr7g076707.1 | PPR containing plant-like protein | HC |
chr7:28928185-28925455 | 20130731
Length = 569
Score = 157 bits (398), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 101/284 (35%), Positives = 154/284 (54%), Gaps = 45/284 (15%)
Query: 12 TFPLLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESS 71
T+P LLK ++ ++A++ KLGFD D F NALI +A +G A +VFDE S
Sbjct: 79 TYPFLLKACARISNVSCTTVHARVLKLGFDSDLFVSNALIHGYAGFCELGFARKVFDEMS 138
Query: 72 VKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKW 131
+D+++W +LI GY + SE L F +MR DA+T+V V+ A + G+W
Sbjct: 139 ERDLVSWNSLICGYGRCRRYSEVLVVFEEMRMADVKGDAVTMVKVVLACTV-----LGEW 193
Query: 132 --VHGF--YVQAGRVQLDGYVWSALMDM-------------------------------Y 156
V Y++ +V++D Y+ + L+DM Y
Sbjct: 194 GVVDAMIEYIEENKVEVDVYLGNTLIDMYGRRSMVDLARRVFDRMRDRNMVSWNAMIMGY 253
Query: 157 FKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFT 216
K G+ A K+FD+MP +RDV+ W+ +++ Y Q +F A+R+F M+ V P+E T
Sbjct: 254 GKAGNLVAARKLFDDMP--HRDVISWTSMISSYSQAGQFGKAVRLFQEMMVTKVKPDEIT 311
Query: 217 LTSVLSACAHSGALDQGKLVHQYIECKKVSLNS-VELGTALVDM 259
+ SVLSACAH GALD G+ VH+YI +K +N+ + +G AL+DM
Sbjct: 312 VASVLSACAHIGALDVGEAVHEYI--RKYDVNADIYVGNALIDM 353
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 125/233 (53%), Gaps = 6/233 (2%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFI 60
+ + VE D + L+ M+ + + D + ++F D + + NA+I + +G +
Sbjct: 203 IEENKVEVDVYLGNTLIDMYGRRSMVD---LARRVFDRMRDRNMVSWNAMIMGYGKAGNL 259
Query: 61 GSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAA 120
+A ++FD+ +D+I+WT++I+ Y + +A++ F +M T D +TV SVL A
Sbjct: 260 VAARKLFDDMPHRDVISWTSMISSYSQAGQFGKAVRLFQEMMVTKVKPDEITVASVLSAC 319
Query: 121 AMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVV 180
A G + G+ VH Y++ V D YV +AL+DMY KCG + VF+EM RD V
Sbjct: 320 AHIGALDVGEAVHE-YIRKYDVNADIYVGNALIDMYCKCGAVEKGLSVFEEM--GKRDSV 376
Query: 181 CWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
W+ ++AG A+ +F ML + V P T VL ACAH+G +D+G
Sbjct: 377 SWTSVIAGLAVNGSADSALNLFSLMLREGVRPTHGTFVGVLLACAHAGVVDKG 429
>Medtr7g093900.1 | PPR containing plant-like protein | HC |
chr7:37365900-37360699 | 20130731
Length = 854
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/290 (33%), Positives = 148/290 (51%), Gaps = 33/290 (11%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M Q VE D +F LK + V + +Y ++K+GFD + N LI +A G
Sbjct: 85 MFQLRVEMDSRSFVFALKACQQFETVFEGESVYCVVWKMGFDCELLVRNGLIHFYAERGL 144
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ +A QVFDESS KD++ WT +I+GY +D EA++ F M + + +T+++V+ A
Sbjct: 145 LKNARQVFDESSDKDVVTWTTMIDGYAAHDCSEEAMEVFELMLLSHVEPNEVTLIAVVSA 204
Query: 120 AAMAGDDNFGKWVH-------------------GFYVQAG-----------RVQLDGYVW 149
+ G+ GK VH YV+ D Y W
Sbjct: 205 CSDMGNLEMGKRVHEKVEEKNMRCSLSLHNALLDMYVKCDCLVDARELFDRMATKDVYSW 264
Query: 150 SALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDN 209
+++++ Y KCG + A + FD+ P ++ VCWS ++AGY Q NK ++++++F M+
Sbjct: 265 TSMVNGYAKCGDLESARRFFDQTP--RKNAVCWSAMIAGYSQNNKPKESLKLFHEMMERG 322
Query: 210 VVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
VVP E TL SVLSAC L+ G +HQY K+ SV L A+VDM
Sbjct: 323 VVPIEHTLVSVLSACGQLTCLNLGDWIHQYFVVGKIIPLSVTLENAIVDM 372
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 110/192 (57%), Gaps = 2/192 (1%)
Query: 43 DRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMR 102
D ++ ++++ +A G + SA + FD++ K+ + W+A+I GY +N+ P E+LK F +M
Sbjct: 260 DVYSWTSMVNGYAKCGDLESARRFFDQTPRKNAVCWSAMIAGYSQNNKPKESLKLFHEMM 319
Query: 103 STGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHC 162
G T+VSVL A N G W+H ++V + L + +A++DMY KCG
Sbjct: 320 ERGVVPIEHTLVSVLSACGQLTCLNLGDWIHQYFVVGKIIPLSVTLENAIVDMYAKCGSI 379
Query: 163 DDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLS 222
D A +VF MP R+++ W+ ++AGY + + AI VF M + PN T S+L+
Sbjct: 380 DAATEVFSTMP--ERNLISWNTMIAGYAANGRAKQAINVFDQMRNMGFEPNNITFVSLLT 437
Query: 223 ACAHSGALDQGK 234
AC+H G + +G+
Sbjct: 438 ACSHGGLISEGR 449
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 104/207 (50%), Gaps = 4/207 (1%)
Query: 53 AFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALT 112
A A+SG + A +F+ + W +I GY P A FV M +D+ +
Sbjct: 37 ALAHSGDLHYAHTIFNRVEQPNTFMWNTMIRGYQNARKPIFAFSFFVYMFQLRVEMDSRS 96
Query: 113 VVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEM 172
V L+A G+ V+ + G + V + L+ Y + G +A +VFDE
Sbjct: 97 FVFALKACQQFETVFEGESVYCVVWKMG-FDCELLVRNGLIHFYAERGLLKNARQVFDE- 154
Query: 173 PYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQ 232
S +DVV W+ ++ GY + ++A+ VF ML +V PNE TL +V+SAC+ G L+
Sbjct: 155 -SSDKDVVTWTTMIDGYAAHDCSEEAMEVFELMLLSHVEPNEVTLIAVVSACSDMGNLEM 213
Query: 233 GKLVHQYIECKKVSLNSVELGTALVDM 259
GK VH+ +E K + S+ L AL+DM
Sbjct: 214 GKRVHEKVEEKNMRC-SLSLHNALLDM 239
>Medtr7g093900.2 | PPR containing plant-like protein | HC |
chr7:37366165-37359102 | 20130731
Length = 663
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/290 (33%), Positives = 148/290 (51%), Gaps = 33/290 (11%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M Q VE D +F LK + V + +Y ++K+GFD + N LI +A G
Sbjct: 135 MFQLRVEMDSRSFVFALKACQQFETVFEGESVYCVVWKMGFDCELLVRNGLIHFYAERGL 194
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ +A QVFDESS KD++ WT +I+GY +D EA++ F M + + +T+++V+ A
Sbjct: 195 LKNARQVFDESSDKDVVTWTTMIDGYAAHDCSEEAMEVFELMLLSHVEPNEVTLIAVVSA 254
Query: 120 AAMAGDDNFGKWVH-------------------GFYVQAG-----------RVQLDGYVW 149
+ G+ GK VH YV+ D Y W
Sbjct: 255 CSDMGNLEMGKRVHEKVEEKNMRCSLSLHNALLDMYVKCDCLVDARELFDRMATKDVYSW 314
Query: 150 SALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDN 209
+++++ Y KCG + A + FD+ P ++ VCWS ++AGY Q NK ++++++F M+
Sbjct: 315 TSMVNGYAKCGDLESARRFFDQTP--RKNAVCWSAMIAGYSQNNKPKESLKLFHEMMERG 372
Query: 210 VVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
VVP E TL SVLSAC L+ G +HQY K+ SV L A+VDM
Sbjct: 373 VVPIEHTLVSVLSACGQLTCLNLGDWIHQYFVVGKIIPLSVTLENAIVDM 422
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 110/192 (57%), Gaps = 2/192 (1%)
Query: 43 DRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMR 102
D ++ ++++ +A G + SA + FD++ K+ + W+A+I GY +N+ P E+LK F +M
Sbjct: 310 DVYSWTSMVNGYAKCGDLESARRFFDQTPRKNAVCWSAMIAGYSQNNKPKESLKLFHEMM 369
Query: 103 STGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHC 162
G T+VSVL A N G W+H ++V + L + +A++DMY KCG
Sbjct: 370 ERGVVPIEHTLVSVLSACGQLTCLNLGDWIHQYFVVGKIIPLSVTLENAIVDMYAKCGSI 429
Query: 163 DDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLS 222
D A +VF MP R+++ W+ ++AGY + + AI VF M + PN T S+L+
Sbjct: 430 DAATEVFSTMP--ERNLISWNTMIAGYAANGRAKQAINVFDQMRNMGFEPNNITFVSLLT 487
Query: 223 ACAHSGALDQGK 234
AC+H G + +G+
Sbjct: 488 ACSHGGLISEGR 499
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 121/250 (48%), Gaps = 6/250 (2%)
Query: 12 TFPLLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALIS--AFANSGFIGSACQVFDE 69
T P LL M S + I A++ G F + +I+ A A+SG + A +F+
Sbjct: 44 TNPTLLIMESCSTMRQLKQIQARMTLTGIITHAFPVSRVIAFCALAHSGDLHYAHTIFNR 103
Query: 70 SSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFG 129
+ W +I GY P A FV M +D+ + V L+A G
Sbjct: 104 VEQPNTFMWNTMIRGYQNARKPIFAFSFFVYMFQLRVEMDSRSFVFALKACQQFETVFEG 163
Query: 130 KWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGY 189
+ V+ + G + V + L+ Y + G +A +VFDE S +DVV W+ ++ GY
Sbjct: 164 ESVYCVVWKMG-FDCELLVRNGLIHFYAERGLLKNARQVFDE--SSDKDVVTWTTMIDGY 220
Query: 190 VQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNS 249
+ ++A+ VF ML +V PNE TL +V+SAC+ G L+ GK VH+ +E K + S
Sbjct: 221 AAHDCSEEAMEVFELMLLSHVEPNEVTLIAVVSACSDMGNLEMGKRVHEKVEEKNMRC-S 279
Query: 250 VELGTALVDM 259
+ L AL+DM
Sbjct: 280 LSLHNALLDM 289
>Medtr2g018870.1 | PPR containing plant-like protein | HC |
chr2:6013889-6015841 | 20130731
Length = 613
Score = 154 bits (390), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 89/229 (38%), Positives = 130/229 (56%), Gaps = 4/229 (1%)
Query: 6 VEPDQHTFPLLLKMFSKPV-VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSAC 64
VEPD HT+P LLK SK + V D MI++ + GF+ F N+L+ +A G SA
Sbjct: 136 VEPDTHTYPFLLKAISKSLNVRDGEMIHSVTVRNGFESLIFVRNSLLHIYAACGDTESAY 195
Query: 65 QVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAG 124
+VF+ +D++AW ++ING+ N P+EAL F +M G D TVVS+ A A G
Sbjct: 196 KVFELMGERDLVAWNSVINGFALNGKPNEALSLFREMSLKGVEPDGFTVVSLFSACAELG 255
Query: 125 DDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSV 184
G+ VH + ++ G + + +V ++L+D Y KCG +A +VF EM S R+VV W+
Sbjct: 256 ALELGRRVHVYLLKVG-LTGNLHVNNSLLDFYAKCGSIREAQQVFSEM--SERNVVSWTS 312
Query: 185 LVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
LV G ++A+ +F M +VP E T VL AC+H G LD+G
Sbjct: 313 LVVGLAVNGFGEEALGLFKEMERQKIVPREITFVGVLYACSHCGMLDEG 361
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 93/178 (52%), Gaps = 3/178 (1%)
Query: 63 ACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAM 122
A VF ++ W +I GY ++D + AL + KM + D T +L+A +
Sbjct: 93 AHNVFTLLYNPNVFTWNTMIRGYAESDNSTPALGLYRKMLGSCVEPDTHTYPFLLKAISK 152
Query: 123 AGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCW 182
+ + G+ +H V+ G L +V ++L+ +Y CG + A KVF+ M RD+V W
Sbjct: 153 SLNVRDGEMIHSVTVRNGFESLI-FVRNSLLHIYAACGDTESAYKVFELM--GERDLVAW 209
Query: 183 SVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYI 240
+ ++ G+ K +A+ +F M V P+ FT+ S+ SACA GAL+ G+ VH Y+
Sbjct: 210 NSVINGFALNGKPNEALSLFREMSLKGVEPDGFTVVSLFSACAELGALELGRRVHVYL 267
>Medtr6g093170.1 | PPR containing protein | HC |
chr6:35177726-35180122 | 20130731
Length = 608
Score = 152 bits (384), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 150/291 (51%), Gaps = 35/291 (12%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPV-VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
+R G+ PD +T+P +LK + I+A +FK G D D + N+ + +A G
Sbjct: 94 LRLNGLYPDNYTYPFVLKAVAFIADFRQGTKIHAFVFKTGLDSDYYVSNSFMDMYAELGR 153
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMR-STGTGVDALTVVSVLR 118
I ++FDE S +D ++W +I+G VK EA++ F +MR + + TVVS L
Sbjct: 154 IDFVRKLFDEISERDSVSWNVMISGCVKCRRFEEAVEVFQRMRVDSNEKISEATVVSSLT 213
Query: 119 AAAMAGDDNFGKWVHGF------------------------YVQAGRVQLDGYV------ 148
A A + + GK +HGF YV R DG +
Sbjct: 214 ACAASRNVEVGKEIHGFIIEKELDFTMRMGNALLDMYCKCGYVSVAREIFDGMIEKNVNC 273
Query: 149 WSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSD 208
W++++ Y CG D A +FD+ P RDVV W+ ++ GYVQ N+F +A+ +F M
Sbjct: 274 WTSMVTGYVSCGELDKARDLFDKSPT--RDVVLWTAMINGYVQFNRFDEAVALFEEMQVR 331
Query: 209 NVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
V P++F + ++L+ CA G L+ G+ +H Y+ ++ +++V +GT+L++M
Sbjct: 332 GVKPDKFIVVALLTCCAQLGTLEHGRWIHDYVRENRIVVDAV-VGTSLIEM 381
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 108/194 (55%), Gaps = 3/194 (1%)
Query: 49 ALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGV 108
++++ + + G + A +FD+S +D++ WTA+INGYV+ + EA+ F +M+ G
Sbjct: 276 SMVTGYVSCGELDKARDLFDKSPTRDVVLWTAMINGYVQFNRFDEAVALFEEMQVRGVKP 335
Query: 109 DALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKV 168
D VV++L A G G+W+H YV+ R+ +D V ++L++MY KCG + + +V
Sbjct: 336 DKFIVVALLTCCAQLGTLEHGRWIHD-YVRENRIVVDAVVGTSLIEMYAKCGCVEKSLEV 394
Query: 169 FDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSG 228
F+ + +D W+ ++ G K +A+ +F M P++ T +L+AC+H G
Sbjct: 395 FNGLKE--KDTASWTSIICGLAMNGKTIEALELFEEMKIFGAKPDDVTFIVLLNACSHGG 452
Query: 229 ALDQGKLVHQYIEC 242
+++G + + C
Sbjct: 453 LVEEGHKLFHSMSC 466
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 82/175 (46%), Gaps = 3/175 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M+ +GV+PD+ LL ++ +E I+ + + +D G +LI +A G
Sbjct: 328 MQVRGVKPDKFIVVALLTCCAQLGTLEHGRWIHDYVRENRIVVDAVVGTSLIEMYAKCGC 387
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ + +VF+ KD +WT++I G N EAL+ F +M+ G D +T + +L A
Sbjct: 388 VEKSLEVFNGLKEKDTASWTSIICGLAMNGKTIEALELFEEMKIFGAKPDDVTFIVLLNA 447
Query: 120 AAMAGDDNFG-KWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMP 173
+ G G K H G ++ + + +D+ + G +A ++ ++P
Sbjct: 448 CSHGGLVEEGHKLFHSMSCIYG-IEPNLEHYGCFIDLLGRAGLLHEAEELIKKLP 501
>Medtr5g024360.1 | PPR containing plant-like protein | HC |
chr5:9808546-9804666 | 20130731
Length = 611
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/271 (33%), Positives = 148/271 (54%), Gaps = 20/271 (7%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPFM---IYAQIFKLGFDLDRFAGNALISAFANS 57
M Q G PD TFP +LK S + D +++ I K GF+ + + L++ +
Sbjct: 98 MLQNGYSPDHFTFPFVLKACS--FIYDQVSGKCVHSCILKSGFEANVYVATGLLNMYVEC 155
Query: 58 GFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVL 117
+ S +VFD+ +++AWT LINGYV ND P EAL+ F +M G + +T+V+ L
Sbjct: 156 KNMESGLKVFDKIPKWNVVAWTCLINGYVINDQPREALEVFKEMGRWGVEANEVTMVNAL 215
Query: 118 RAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVW---------SALMDMYFKCGHCDDACKV 168
A A D + G+WVH +AG D +V+ +A+++MY KCG + A ++
Sbjct: 216 IACARCRDVDTGRWVHERVCKAG---YDPFVFASNSNVILATAIVEMYAKCGWLNVAREL 272
Query: 169 FDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSG 228
F++MP R++V W+ ++ Y Q ++ +A+ +F+ ML++ P++ T SVLS CA
Sbjct: 273 FNKMP--ERNIVAWNCMINAYNQYERYNEALGLFFYMLANGFCPDKATFLSVLSVCARRC 330
Query: 229 ALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
L G+ VH Y+ K + L TAL+DM
Sbjct: 331 VLALGETVHAYL-LKSNMAKDIALATALLDM 360
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 109/212 (51%), Gaps = 10/212 (4%)
Query: 31 IYAQIFKLGFDLDRFAGN-------ALISAFANSGFIGSACQVFDESSVKDIIAWTALIN 83
++ ++ K G+D FA N A++ +A G++ A ++F++ ++I+AW +IN
Sbjct: 230 VHERVCKAGYDPFVFASNSNVILATAIVEMYAKCGWLNVARELFNKMPERNIVAWNCMIN 289
Query: 84 GYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQ 143
Y + + +EAL F M + G D T +SVL A G+ VH + +++ +
Sbjct: 290 AYNQYERYNEALGLFFYMLANGFCPDKATFLSVLSVCARRCVLALGETVHAYLLKSNMAK 349
Query: 144 LDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFW 203
D + +AL+DMY K G A K+F+ +DVV W+ ++ +A+ +F
Sbjct: 350 -DIALATALLDMYAKNGELGSAQKIFNN-SLEKKDVVMWTSMINALAIHGHGNEALSLFQ 407
Query: 204 NMLSDN-VVPNEFTLTSVLSACAHSGALDQGK 234
M D+ +VP+ T VL AC+H G +++ +
Sbjct: 408 IMQEDSSLVPDHITYIGVLFACSHVGLVEEAQ 439
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 93/192 (48%), Gaps = 6/192 (3%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKP-VVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M G PD+ TF +L + ++ V+ ++A + K D AL+ +A +G
Sbjct: 307 MLANGFCPDKATFLSVLSVCARRCVLALGETVHAYLLKSNMAKDIALATALLDMYAKNGE 366
Query: 60 IGSACQVFDES-SVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGV-DALTVVSVL 117
+GSA ++F+ S KD++ WT++IN + +EAL F M+ + V D +T + VL
Sbjct: 367 LGSAQKIFNNSLEKKDVVMWTSMINALAIHGHGNEALSLFQIMQEDSSLVPDHITYIGVL 426
Query: 118 RAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYR 177
A + G + ++ + + +S ++D+ + GH +A K+ + M S R
Sbjct: 427 FACSHVGLVEEAQKQFNLMTKSYGILPEKEHYSCMVDLLSRAGHFREAEKLMETM--SIR 484
Query: 178 -DVVCWSVLVAG 188
++ W L+ G
Sbjct: 485 PNIAIWGALLNG 496
>Medtr4g113830.1 | organelle transcript processing protein, putative
| HC | chr4:46849211-46846995 | 20130731
Length = 738
Score = 148 bits (373), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 91/287 (31%), Positives = 145/287 (50%), Gaps = 35/287 (12%)
Query: 5 GVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDL--------------------- 42
GV+P+ HTFP L K +K + ++A KL
Sbjct: 126 GVQPNSHTFPFLFKSCTKAKATHEGKQLHAHALKLALHFNPHVHTSVIHMYASVGEMDFA 185
Query: 43 ----------DRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPS 92
D + ALI+ + + G + A ++FDE VKD+++W A+I+GYV++
Sbjct: 186 RLVFDKSSLRDAVSFTALITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFE 245
Query: 93 EALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSAL 152
EA+ CF +M+ + T+V VL A GKW+ G +V+ + + +AL
Sbjct: 246 EAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELGKWI-GSWVRDNGFGSNLQLTNAL 304
Query: 153 MDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVP 212
+DMY KCG D A ++FD + +DV+ W+ ++ GY + +++A+ +F ML NV P
Sbjct: 305 IDMYCKCGETDIARELFDGI--EEKDVISWNTMIGGYSYLSLYEEALALFEVMLRSNVKP 362
Query: 213 NEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
N+ T +L ACA GALD GK VH YI+ + ++ L T+L+DM
Sbjct: 363 NDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDM 409
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 104/202 (51%), Gaps = 6/202 (2%)
Query: 39 GFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCF 98
GF + NALI + G A ++FD KD+I+W +I GY L EAL F
Sbjct: 293 GFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVISWNTMIGGYSYLSLYEEALALF 352
Query: 99 VKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFK 158
M + + +T + +L A A G + GKWVH + + R + +W++L+DMY K
Sbjct: 353 EVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAK 412
Query: 159 CGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVV-PNEFTL 217
CG + A +VF M R++ W+ +++G+ + A+ +F M++ + P++ T
Sbjct: 413 CGCIEAAERVFRSM--HSRNLASWNAMLSGFAMHGHAERALALFSEMVNKGLFRPDDITF 470
Query: 218 TSVLSACAHSGALDQGKLVHQY 239
VLSAC +G +D G HQY
Sbjct: 471 VGVLSACTQAGLVDLG---HQY 489
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 124/264 (46%), Gaps = 38/264 (14%)
Query: 31 IYAQIFKLGFDLDRFAGNALIS--AFANSGFIGSACQVFDESS---VKDIIAWTALINGY 85
I++ I K G + F + LI A + SG + A +F+E+ ++ W +LI GY
Sbjct: 47 IHSLIIKTGLNNTVFVQSKLIHFCAVSPSGDLSYALSLFEENQQHHKHNVFIWNSLIRGY 106
Query: 86 VKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHG----------- 134
+ P +L F +M G ++ T + ++ A + GK +H
Sbjct: 107 SLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSCTKAKATHEGKQLHAHALKLALHFNP 166
Query: 135 --------FYVQAGRVQL-----------DGYVWSALMDMYFKCGHCDDACKVFDEMPYS 175
Y G + D ++AL+ Y G DDA ++FDE+P
Sbjct: 167 HVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGYVSQGCLDDARRLFDEIP-- 224
Query: 176 YRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKL 235
+DVV W+ +++GYVQ +F++AI F+ M NV+PN+ T+ VLSAC H+ + + GK
Sbjct: 225 VKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELGKW 284
Query: 236 VHQYIECKKVSLNSVELGTALVDM 259
+ ++ N ++L AL+DM
Sbjct: 285 IGSWVRDNGFGSN-LQLTNALIDM 307
>Medtr8g086560.1 | PPR containing plant protein | HC |
chr8:35911406-35914374 | 20130731
Length = 908
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/260 (35%), Positives = 154/260 (59%), Gaps = 5/260 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M++ GV + +TF +LK F+ V++ ++ + KLGF + N+LI+A+ G
Sbjct: 186 MQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGG 245
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ SA +FDE S D+++W ++ING V N L+ F++M G VD T+VSVL A
Sbjct: 246 VESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVA 305
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
A G+ + G+ +HGF V+A + + + L+DMY KCG+ + A +VF +M + +
Sbjct: 306 CANIGNLSLGRALHGFGVKACFSE-EVVFSNTLLDMYSKCGNLNGATEVFVKMGDT--TI 362
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQY 239
V W+ ++A YV+ + DAI +F M S V P+ +T+TS++ ACA S +LD+G+ VH Y
Sbjct: 363 VSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSY 422
Query: 240 IECKKVSLNSVELGTALVDM 259
+ K +++ + AL++M
Sbjct: 423 V-IKNGMGSNLPVTNALINM 441
Score = 124 bits (311), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 78/234 (33%), Positives = 130/234 (55%), Gaps = 5/234 (2%)
Query: 1 MRQKGVEPDQHTFPLLLKMFS-KPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M+ KGV PD +T ++ + ++ +++ + K G + NALI+ +A G
Sbjct: 388 MQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGS 447
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ A VF + VKDI++W +I GY +N LP+EAL+ F+ M+ D +T+ VL A
Sbjct: 448 VEEARLVFSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDMQKQFKP-DDITMACVLPA 506
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
A + G+ +HG ++ G D +V AL+DMY KCG A +FD +P +D+
Sbjct: 507 CAGLAALDKGREIHGHILRRGYFS-DLHVACALVDMYAKCGLLVLAQLLFDMIP--KKDL 563
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
+ W+V++AGY +AI F M + P+E + +++L+AC+HSG L++G
Sbjct: 564 ISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSAILNACSHSGLLNEG 617
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 121/212 (57%), Gaps = 5/212 (2%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTG 107
N L+ ++ G + A +VF + I++WT++I YV+ L S+A+ F +M+S G
Sbjct: 335 NTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVR 394
Query: 108 VDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACK 167
D TV S++ A A + + G+ VH + ++ G + + V +AL++MY KCG ++A
Sbjct: 395 PDIYTVTSIVHACACSSSLDKGRDVHSYVIKNG-MGSNLPVTNALINMYAKCGSVEEARL 453
Query: 168 VFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHS 227
VF ++P +D+V W+ ++ GY Q +A+ +F +M P++ T+ VL ACA
Sbjct: 454 VFSKIPV--KDIVSWNTMIGGYSQNLLPNEALELFLDM-QKQFKPDDITMACVLPACAGL 510
Query: 228 GALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
ALD+G+ +H +I ++ + + + ALVDM
Sbjct: 511 AALDKGREIHGHI-LRRGYFSDLHVACALVDM 541
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 104/218 (47%), Gaps = 3/218 (1%)
Query: 22 KPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTAL 81
K +ED +++ I G +D G L+ + N G + ++FD+ + W L
Sbjct: 107 KKSLEDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLL 166
Query: 82 INGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGR 141
++ Y K E++ F KM+ G + T VL+ A G K VHG+ ++ G
Sbjct: 167 MSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLG- 225
Query: 142 VQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRV 201
+ V ++L+ YFK G + A +FDE+ S DVV W+ ++ G V + + +
Sbjct: 226 FGSNTAVVNSLIAAYFKFGGVESAHNLFDEL--SEPDVVSWNSMINGCVVNGFSGNGLEI 283
Query: 202 FWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQY 239
F ML V + TL SVL ACA+ G L G+ +H +
Sbjct: 284 FIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGF 321
>Medtr4g007160.1 | PPR containing plant-like protein | HC |
chr4:976511-978646 | 20130731
Length = 595
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/257 (35%), Positives = 144/257 (56%), Gaps = 8/257 (3%)
Query: 4 KGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGS 62
G PD +T P +LK ++ + + I+ K D F N+ + ++ G
Sbjct: 103 NGFVPDVYTVPAVLKSCARFSGIAEVKQIHTLAVKTDLWCDMFVQNSFVHVYSICGDTVG 162
Query: 63 ACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAM 122
A +VFD V+D+++WT LI+GY+K L ++A+ F++M +A T VS+L A
Sbjct: 163 ASKVFDFMPVRDVVSWTGLISGYMKAGLFNDAVALFLRM---DVAPNAATFVSILGACGK 219
Query: 123 AGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCW 182
G N GK +HG + + + V + LMDMY KC DA ++FDE+P +D+V W
Sbjct: 220 LGCLNLGKGIHGLVSKYPHGK-ELVVSNTLMDMYVKCESVTDAKRLFDEIPE--KDIVSW 276
Query: 183 SVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIEC 242
+ +++G VQ Q+++ +F+ ML P+ LTSVLSACA G LD G+ VH+YI+
Sbjct: 277 TSMISGLVQYQCPQESLDLFYEMLGSGFEPDGVILTSVLSACASLGLLDYGRWVHEYIDH 336
Query: 243 KKVSLNSVELGTALVDM 259
++ + V +GT+L+DM
Sbjct: 337 SRIKWD-VHIGTSLIDM 352
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 113/204 (55%), Gaps = 3/204 (1%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
I+ + K + N L+ + + A ++FDE KDI++WT++I+G V+
Sbjct: 229 IHGLVSKYPHGKELVVSNTLMDMYVKCESVTDAKRLFDEIPEKDIVSWTSMISGLVQYQC 288
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
P E+L F +M +G D + + SVL A A G ++G+WVH Y+ R++ D ++ +
Sbjct: 289 PQESLDLFYEMLGSGFEPDGVILTSVLSACASLGLLDYGRWVHE-YIDHSRIKWDVHIGT 347
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV 210
+L+DMY KCG + A ++F+ +P +++ W+ + G Q+A++ F ++
Sbjct: 348 SLIDMYAKCGCIEMAQQMFNLLP--SKNIRTWNAYIGGLAINGHGQEALKQFGYLVESGT 405
Query: 211 VPNEFTLTSVLSACAHSGALDQGK 234
PNE T +V SAC HSG +D+G+
Sbjct: 406 RPNEITFLAVFSACCHSGLVDEGR 429
>Medtr5g006420.1 | organelle transcript processing protein, putative
| HC | chr5:911890-915336 | 20130731
Length = 726
Score = 145 bits (367), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 145/281 (51%), Gaps = 32/281 (11%)
Query: 9 DQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVF 67
D+ +FP LLK SK I+ KLGF D F LI+ +A+ I A +F
Sbjct: 120 DRFSFPSLLKAVSKVSAFNHGLEIHGLASKLGFVDDPFIQTGLIAMYASCRRIMDARLLF 179
Query: 68 DESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDN 127
D+ D +AW +I+GY +N +AL+ F MRS+ D++ + +VL A AG+ +
Sbjct: 180 DKMCHPDAVAWNMIIDGYCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSACGHAGNLS 239
Query: 128 FGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSY----------- 176
+G+ +H F G +D ++ +AL++MY CG D A K++D + +
Sbjct: 240 YGRTIHEFVKDNG-YAIDSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSGY 298
Query: 177 ------------------RDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLT 218
RD+VCWS +++GY + ++ Q+A+++F ML VP++ T+
Sbjct: 299 AKLGMVKDARFIFDQMIERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQITML 358
Query: 219 SVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
SV+SAC+H GAL Q +H Y++ ++ + AL+DM
Sbjct: 359 SVISACSHVGALAQANWIHTYVDRSGFG-RALSVNNALIDM 398
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 107/186 (57%), Gaps = 3/186 (1%)
Query: 49 ALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGV 108
A++S +A G + A +FD+ +D++ W+A+I+GY ++D P EALK F +M +
Sbjct: 293 AMLSGYAKLGMVKDARFIFDQMIERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVP 352
Query: 109 DALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKV 168
D +T++SV+ A + G W+H + ++G + V +AL+DMY KCG+ A +V
Sbjct: 353 DQITMLSVISACSHVGALAQANWIHTYVDRSGFGRALS-VNNALIDMYAKCGNLVKAREV 411
Query: 169 FDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSG 228
F+ MP ++V+ WS ++ + AI++F M N+ PN T VL AC H+G
Sbjct: 412 FENMPR--KNVISWSSMINAFAMHGNADSAIKLFRRMKEVNIEPNGVTFIGVLYACGHAG 469
Query: 229 ALDQGK 234
+++G+
Sbjct: 470 LVEEGE 475
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 99/180 (55%), Gaps = 5/180 (2%)
Query: 81 LINGYVKNDLPSEALKCFVKMRSTGT-GVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQA 139
L+ ++ P + + + +R+ +D + S+L+A + N G +HG +
Sbjct: 91 LLRHLSRSSFPEKTIFLYHNLRAINAFALDRFSFPSLLKAVSKVSAFNHGLEIHGLASKL 150
Query: 140 GRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAI 199
G V D ++ + L+ MY C DA +FD+M + D V W++++ GY Q + DA+
Sbjct: 151 GFVD-DPFIQTGLIAMYASCRRIMDARLLFDKM--CHPDAVAWNMIIDGYCQNGHYDDAL 207
Query: 200 RVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
R+F +M S ++ P+ L +VLSAC H+G L G+ +H++++ +++S L TAL++M
Sbjct: 208 RLFEDMRSSDMKPDSVILCTVLSACGHAGNLSYGRTIHEFVKDNGYAIDS-HLQTALINM 266
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 86/189 (45%), Gaps = 2/189 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M QK PDQ T ++ S + I+ + + GF NALI +A G
Sbjct: 345 MLQKRSVPDQITMLSVISACSHVGALAQANWIHTYVDRSGFGRALSVNNALIDMYAKCGN 404
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ A +VF+ K++I+W+++IN + + A+K F +M+ + +T + VL A
Sbjct: 405 LVKAREVFENMPRKNVISWSSMINAFAMHGNADSAIKLFRRMKEVNIEPNGVTFIGVLYA 464
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
AG G+ + + + + ++D+Y + A ++ + MP++ +V
Sbjct: 465 CGHAGLVEEGEKLFSSMINEHGISPTREHYGCMVDLYCRANFLRKAIELIETMPFA-PNV 523
Query: 180 VCWSVLVAG 188
+ W L++
Sbjct: 524 IIWGSLMSA 532
>Medtr3g098280.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:44861451-44859606 | 20130731
Length = 554
Score = 145 bits (365), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 78/203 (38%), Positives = 121/203 (59%), Gaps = 7/203 (3%)
Query: 35 IFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEA 94
IFKLGFD + F NALI+A+ + G + A ++FDE +DI++W+ LI+ VKN+LP+EA
Sbjct: 103 IFKLGFDTNIFVQNALINAYGSRGSLDVAVKLFDEMRRRDIVSWSTLISCLVKNNLPAEA 162
Query: 95 LKCFVKM----RSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
L F +M R +D ++SV+ A + G G WVH F V+ G + + + +
Sbjct: 163 LSVFQQMQMGHRDIRNWLDRAIMLSVISAVSSLGVIELGIWVHSFIVRMG-IVMTVPLGT 221
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV 210
AL++MY +CG D + KVFDEMP R+VV W+ L+ G + ++A++VF+ M +
Sbjct: 222 ALINMYSRCGLIDRSVKVFDEMP--ERNVVTWTALINGLAVHGRSREALKVFYEMKESGL 279
Query: 211 VPNEFTLTSVLSACAHSGALDQG 233
P+ VL AC+H G ++ G
Sbjct: 280 KPDGALFIGVLVACSHGGLVEDG 302
>Medtr2g094430.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:40268645-40272453 | 20130731
Length = 678
Score = 145 bits (365), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 86/259 (33%), Positives = 142/259 (54%), Gaps = 5/259 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M + + PD TF +LK ++ + MI++ +FK GFD D F ++ ++ GF
Sbjct: 95 MHKAAIVPDSFTFSFVLKACARLNLFHLGVMIHSLVFKTGFDCDVFVKTNVVCFYSKCGF 154
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ A +VFD+ VK++++WT +I G ++ EA+ F + +G D +V VLRA
Sbjct: 155 LRDAWKVFDDMVVKNVVSWTGMICGCIEFGKFREAVDLFRGLLESGLRPDGFVIVRVLRA 214
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
A GD G+W+ + G + + +V ++L+DMY KCG ++A VFD M +D+
Sbjct: 215 CARLGDLESGRWIDRCMRECG-LSRNVFVATSLVDMYTKCGSMEEARFVFDGM--VEKDI 271
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQY 239
VCWS ++ GY ++AI +F+ M NV P+ + + LS+CA GAL+ G
Sbjct: 272 VCWSAMIQGYASNGLPREAIELFFEMRKVNVRPDCYAMVGALSSCASLGALELGNWAKGL 331
Query: 240 IECKKVSLNSVELGTALVD 258
+ ++ N V LGT+L+D
Sbjct: 332 MNYEEFLSNPV-LGTSLID 349
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 107/233 (45%), Gaps = 4/233 (1%)
Query: 3 QKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIG 61
+ G+ PD +L+ ++ +E I + + G + F +L+ + G +
Sbjct: 198 ESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGLSRNVFVATSLVDMYTKCGSME 257
Query: 62 SACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAA 121
A VFD KDI+ W+A+I GY N LP EA++ F +MR D +V L + A
Sbjct: 258 EARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMRKVNVRPDCYAMVGALSSCA 317
Query: 122 MAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVC 181
G G W G + + + ++L+D Y KCG ++A V+ M +D V
Sbjct: 318 SLGALELGNWAKGL-MNYEEFLSNPVLGTSLIDFYAKCGSMEEALGVYKMM--KEKDRVV 374
Query: 182 WSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGK 234
++ +++G + A VF M + PNE T +L C H+G +D G+
Sbjct: 375 FNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNEHTFVGLLCGCTHAGLVDDGR 427
>Medtr4g024860.1 | SLOW growth protein | HC | chr4:8430392-8426025 |
20130731
Length = 1026
Score = 144 bits (364), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 90/287 (31%), Positives = 147/287 (51%), Gaps = 38/287 (13%)
Query: 6 VEPDQHTFPLLLK----MFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIG 61
++PD HT+PLLLK +S + + + K GF+ D F NA I+ + G +
Sbjct: 154 LKPDNHTYPLLLKGCCGQYSSCL---GLGVLGHVLKFGFECDIFVHNASITMLLSCGELS 210
Query: 62 SACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAA 121
A VF++S V+D++ W ++I G VK L EA+K + +M + + +T++ ++ + +
Sbjct: 211 VAYDVFNKSRVRDLVTWNSMITGCVKRGLAIEAIKIYKEMEAEKVRPNEITMIGMISSCS 270
Query: 122 MAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSY----- 176
D N GK H Y++ ++ + +ALMDMY KCG A +FD M
Sbjct: 271 QVQDLNLGKEFH-CYIKEHGLEFTIPLTNALMDMYVKCGELLTARVLFDNMAQKTLVSWT 329
Query: 177 ------------------------RDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVP 212
+ VV W+ +++G VQ + ++A+ +F M + P
Sbjct: 330 TMVLGYARFGFLDVAREILYKIPEKSVVPWNAIISGCVQAKQGKEALALFHEMQIRTIEP 389
Query: 213 NEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
++ T+ + LSAC+ GALD G +H YIE K+S++ V LGTALVDM
Sbjct: 390 DKVTMVNCLSACSQLGALDVGIWIHHYIERHKLSID-VALGTALVDM 435
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 104/187 (55%), Gaps = 3/187 (1%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTG 107
++ +A GF+ A ++ + K ++ W A+I+G V+ EAL F +M+
Sbjct: 329 TTMVLGYARFGFLDVAREILYKIPEKSVVPWNAIISGCVQAKQGKEALALFHEMQIRTIE 388
Query: 108 VDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACK 167
D +T+V+ L A + G + G W+H Y++ ++ +D + +AL+DMY KCG+ A +
Sbjct: 389 PDKVTMVNCLSACSQLGALDVGIWIH-HYIERHKLSIDVALGTALVDMYAKCGNIARALQ 447
Query: 168 VFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHS 227
VF+E+P R+ + W+ ++ G QDA+ F M+ +VP+E T VLSAC H
Sbjct: 448 VFEEIPQ--RNCLTWTAVICGLALHGNAQDALSYFSKMIHIGIVPDEITFLGVLSACCHG 505
Query: 228 GALDQGK 234
G +++G+
Sbjct: 506 GLVEEGR 512
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 109/232 (46%), Gaps = 7/232 (3%)
Query: 31 IYAQIFKLGFDLDRFAGNALIS--AFANSGFIGSACQVFDESSVKDIIAWTALINGYVKN 88
I AQ+ G + FA + L++ A + S + ++ ++ +W A I GYV++
Sbjct: 76 IQAQMVSTGLIENGFAASRLVAFCALSESKELDYCTRILYRIKELNVFSWNAAIRGYVES 135
Query: 89 DLPSEALKCFVKMRSTGT-GVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGY 147
+ +M GT D T +L+ G V G ++ G + D +
Sbjct: 136 GDIEGGFMLYKRMLLGGTLKPDNHTYPLLLKGCCGQYSSCLGLGVLGHVLKFG-FECDIF 194
Query: 148 VWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLS 207
V +A + M CG A VF++ RD+V W+ ++ G V+ +AI+++ M +
Sbjct: 195 VHNASITMLLSCGELSVAYDVFNK--SRVRDLVTWNSMITGCVKRGLAIEAIKIYKEMEA 252
Query: 208 DNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
+ V PNE T+ ++S+C+ L+ GK H YI+ + ++ L AL+DM
Sbjct: 253 EKVRPNEITMIGMISSCSQVQDLNLGKEFHCYIKEHGLEF-TIPLTNALMDM 303
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 77/174 (44%), Gaps = 1/174 (0%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVED-PFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M+ + +EPD+ T L S+ D I+ I + +D G AL+ +A G
Sbjct: 382 MQIRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYIERHKLSIDVALGTALVDMYAKCGN 441
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
I A QVF+E ++ + WTA+I G + +AL F KM G D +T + VL A
Sbjct: 442 IARALQVFEEIPQRNCLTWTAVICGLALHGNAQDALSYFSKMIHIGIVPDEITFLGVLSA 501
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMP 173
G G+ V +S ++D+ + GH ++A ++ MP
Sbjct: 502 CCHGGLVEEGRKYFSEMSSKFNVSPKLKHYSCMVDLLGRAGHLEEAEELVKNMP 555
>Medtr5g095690.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:41831683-41828172 | 20130731
Length = 811
Score = 144 bits (363), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 91/259 (35%), Positives = 147/259 (56%), Gaps = 7/259 (2%)
Query: 3 QKGVEPDQHTFPLLLKMF-SKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIG 61
++G E + F LLK+ S + + ++A ++KLG D F G ALI A++ G +
Sbjct: 129 KEGHEVNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHADAFVGTALIDAYSVRGNVD 188
Query: 62 SACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAA 121
A VFD+ KD+++WT ++ Y +N E+L+ F +MR G + T+ L++
Sbjct: 189 VARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGYKPNNFTISGALKSCL 248
Query: 122 MAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVC 181
N GK VHG ++ G D +V AL+++Y K G DA ++F+EMP + D++
Sbjct: 249 GLEAFNVGKSVHGCALK-GCYDHDLFVGIALLELYAKSGEIIDAQRLFEEMPKT--DLIP 305
Query: 182 WSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIE 241
WS+++A Y Q ++ ++A+ +F M +VVPN FT SVL ACA S +LD GK +H +
Sbjct: 306 WSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLGKQIHSCV- 364
Query: 242 CKKVSLNS-VELGTALVDM 259
K LNS V + A++D+
Sbjct: 365 -LKFGLNSNVFVSNAIMDV 382
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/220 (34%), Positives = 125/220 (56%), Gaps = 4/220 (1%)
Query: 40 FDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFV 99
+D D F G AL+ +A SG I A ++F+E D+I W+ +I Y ++D EAL F+
Sbjct: 268 YDHDLFVGIALLELYAKSGEIIDAQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFL 327
Query: 100 KMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKC 159
+MR T + T SVL+A A + + GK +H ++ G + + +V +A+MD+Y KC
Sbjct: 328 RMRQTSVVPNNFTFASVLQACASSVSLDLGKQIHSCVLKFG-LNSNVFVSNAIMDVYAKC 386
Query: 160 GHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTS 219
G +++ K+F+E+P R+ V W+ ++ GYVQ + A+ +F +ML ++ P E T +S
Sbjct: 387 GEIENSMKLFEELPD--RNDVTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSS 444
Query: 220 VLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
VL A A AL+ G +H + K + + +L+DM
Sbjct: 445 VLRASASLAALEPGLQIHS-LTIKTMYNKDTVVANSLIDM 483
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 119/235 (50%), Gaps = 4/235 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVED-PFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
MRQ V P+ TF +L+ + V D I++ + K G + + F NA++ +A G
Sbjct: 329 MRQTSVVPNNFTFASVLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGE 388
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
I ++ ++F+E ++ + W +I GYV+ A+ F M +T SVLRA
Sbjct: 389 IENSMKLFEELPDRNDVTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRA 448
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
+A G +H ++ D V ++L+DMY KCG +DA FD+M + RD
Sbjct: 449 SASLAALEPGLQIHSLTIKT-MYNKDTVVANSLIDMYAKCGRINDARLTFDKM--NKRDE 505
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGK 234
V W+ ++ GY +A+ +F M + PN+ T VLSAC+++G L +G+
Sbjct: 506 VSWNAMICGYSMHGMSMEALNLFDMMQHTDCKPNKLTFVGVLSACSNAGLLYKGQ 560
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 112/232 (48%), Gaps = 7/232 (3%)
Query: 9 DQHTFPLLLKMFSKPVVEDPF---MIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQ 65
D H++ +L+ + DP ++ I K G LD FA N L++ + S + A +
Sbjct: 33 DSHSYAHMLQQIIRNGA-DPIAGKHLHCHILKRGTSLDLFAQNILLNFYVQSNSLQDASK 91
Query: 66 VFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGD 125
+FDE + I++ L GY ++ +AL +++ G V+ ++L+
Sbjct: 92 LFDEMPQTNTISFVTLAQGYSRDHQFHQALHFILRIFKEGHEVNPFVFTTLLKLLVSMDL 151
Query: 126 DNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVL 185
+ +H + G D +V +AL+D Y G+ D A VFD++ +D+V W+ +
Sbjct: 152 AHLCWTLHACVYKLGH-HADAFVGTALIDAYSVRGNVDVARHVFDDI--CCKDMVSWTGM 208
Query: 186 VAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVH 237
VA Y + +++++++F M PN FT++ L +C A + GK VH
Sbjct: 209 VACYAENCFYEESLQLFNQMRIMGYKPNNFTISGALKSCLGLEAFNVGKSVH 260
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 111/251 (44%), Gaps = 13/251 (5%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDP-FMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M + ++P + T+ +L+ + +P I++ K ++ D N+LI +A G
Sbjct: 430 MLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYNKDTVVANSLIDMYAKCGR 489
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
I A FD+ + +D ++W A+I GY + + EAL F M+ T + LT V VL A
Sbjct: 490 INDARLTFDKMNKRDEVSWNAMICGYSMHGMSMEALNLFDMMQHTDCKPNKLTFVGVLSA 549
Query: 120 AAMA-----GDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPY 174
+ A G +F + ++ VW + + G D+A K+ E+ Y
Sbjct: 550 CSNAGLLYKGQAHFESMSKDYDIKPCIEHYTCMVW-----LLGRLGRFDEAMKLIGEIAY 604
Query: 175 SYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGK 234
V+ W L+ V +K D RV + + ++ T + + A +G D
Sbjct: 605 Q-PSVMVWRALLGACV-IHKKVDLGRVCAQHVLEMEPHDDATHVLLSNMYATAGRWDNVA 662
Query: 235 LVHQYIECKKV 245
V +Y++ KKV
Sbjct: 663 FVRKYMQKKKV 673
>Medtr4g086490.1 | PPR containing plant protein | HC |
chr4:33903624-33910415 | 20130731
Length = 1183
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/260 (35%), Positives = 153/260 (58%), Gaps = 5/260 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M++ GV + +TF +LK F+ V++ ++ + KLGF + N+LI+A+ G
Sbjct: 461 MQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGG 520
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ SA +FDE S D+++W ++ING V N L+ F++M G VD T+VSVL A
Sbjct: 521 VESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVA 580
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
A G+ + G+ +HGF V+A + + + L+DMY KCG+ + A +VF +M + +
Sbjct: 581 WANIGNLSLGRALHGFGVKACFSE-EVVFSNTLLDMYSKCGNLNGATEVFVKMGDT--TI 637
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQY 239
V W+ +A YV+ + DAI +F M S V P+ +T+TS++ ACA S +LD+G+ VH Y
Sbjct: 638 VSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSY 697
Query: 240 IECKKVSLNSVELGTALVDM 259
+ K +++ + AL++M
Sbjct: 698 V-IKNGMGSNLPVTNALINM 716
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/234 (33%), Positives = 129/234 (55%), Gaps = 5/234 (2%)
Query: 1 MRQKGVEPDQHTFPLLLKMFS-KPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M+ KGV PD +T ++ + ++ +++ + K G + NALI+ +A G
Sbjct: 663 MQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGS 722
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ A VF + VKDI++W +I GY +N LP+EAL+ F+ M+ D +T+ VL A
Sbjct: 723 VEEARLVFSKIPVKDIVSWNTMIGGYSQNSLPNEALELFLDMQKQFKP-DDITMACVLPA 781
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
A + G+ +HG ++ G D +V AL+DMY KCG A +FD +P +D+
Sbjct: 782 CAGLAALDKGREIHGHILRRGYFS-DLHVACALVDMYAKCGLLVLAQLLFDMIP--KKDL 838
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
+ W+V++AGY +AI F M + P+E + + +L+AC+HSG L++G
Sbjct: 839 ISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSVILNACSHSGLLNEG 892
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 121/212 (57%), Gaps = 5/212 (2%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTG 107
N L+ ++ G + A +VF + I++WT+ I YV+ L S+A+ F +M+S G
Sbjct: 610 NTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVR 669
Query: 108 VDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACK 167
D TV S++ A A + + G+ VH + ++ G + + V +AL++MY KCG ++A
Sbjct: 670 PDIYTVTSIVHACACSSSLDKGRDVHSYVIKNG-MGSNLPVTNALINMYAKCGSVEEARL 728
Query: 168 VFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHS 227
VF ++P +D+V W+ ++ GY Q + +A+ +F +M P++ T+ VL ACA
Sbjct: 729 VFSKIPV--KDIVSWNTMIGGYSQNSLPNEALELFLDM-QKQFKPDDITMACVLPACAGL 785
Query: 228 GALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
ALD+G+ +H +I ++ + + + ALVDM
Sbjct: 786 AALDKGREIHGHI-LRRGYFSDLHVACALVDM 816
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 103/218 (47%), Gaps = 3/218 (1%)
Query: 22 KPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTAL 81
K +ED +++ I G +D G L+ + N G + ++FD+ + W L
Sbjct: 382 KKSLEDGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLL 441
Query: 82 INGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGR 141
++ Y K E++ F KM+ G + T VL+ A G K VHG+ ++ G
Sbjct: 442 MSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLG- 500
Query: 142 VQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRV 201
+ V ++L+ YFK G + A +FDE+ S DVV W+ ++ G V + + +
Sbjct: 501 FGSNTAVVNSLIAAYFKFGGVESAHNLFDEL--SEPDVVSWNSMINGCVVNGFSGNGLEI 558
Query: 202 FWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQY 239
F ML V + TL SVL A A+ G L G+ +H +
Sbjct: 559 FIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGF 596
>Medtr2g024080.1 | PPR containing plant-like protein | HC |
chr2:8563899-8566215 | 20130731
Length = 767
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 123/208 (59%), Gaps = 3/208 (1%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
I+ I + LD A N+L++ +A G + + VFD S +D+++W A++ GY +N
Sbjct: 391 IHGYILRQKLSLDTAAHNSLVTMYAKCGHLDQSYIVFDRMSKRDLVSWNAIVAGYAQNGC 450
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
+A F +MRS D++T+VS+++ A G + GKW+HGF ++ G ++ V +
Sbjct: 451 VYKAFSLFNEMRSCHQTPDSITIVSLVQGCASTGQLHPGKWIHGFVIRNG-LRPCILVDT 509
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV 210
+L+DMY KCG D A + F+ MP +D+V WS ++AGY K + A+R++ L +
Sbjct: 510 SLVDMYCKCGDLDSAQRCFNLMP--SQDLVSWSAIIAGYGYHGKGETALRLYSKFLETRI 567
Query: 211 VPNEFTLTSVLSACAHSGALDQGKLVHQ 238
PN S+LS+C+H+G +DQG +++
Sbjct: 568 KPNHVIFLSILSSCSHNGLIDQGLNIYE 595
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/260 (33%), Positives = 138/260 (53%), Gaps = 5/260 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKM-FSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M+ +G+EP F +L + S + +++ QI + GF LD + I + G
Sbjct: 259 MKLQGLEPGLQAFGSVLSVAVSTGDMRLGRLVHGQILRGGFVLDAHIETSFIVMYLKGGN 318
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
I A ++F+ S KD++ WTA+I+G V+N+ +AL F +M G T+ SV+ A
Sbjct: 319 INVAFKMFERSLDKDVVLWTAMISGLVQNENADKALAVFDQMFKFGMKPSTETMASVITA 378
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
A G N GK +HG Y+ ++ LD ++L+ MY KCGH D + VFD M S RD+
Sbjct: 379 CAQLGAFNLGKSIHG-YILRQKLSLDTAAHNSLVTMYAKCGHLDQSYIVFDRM--SKRDL 435
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQY 239
V W+ +VAGY Q A +F M S + P+ T+ S++ CA +G L GK +H +
Sbjct: 436 VSWNAIVAGYAQNGCVYKAFSLFNEMRSCHQTPDSITIVSLVQGCASTGQLHPGKWIHGF 495
Query: 240 IECKKVSLNSVELGTALVDM 259
+ + + + T+LVDM
Sbjct: 496 V-IRNGLRPCILVDTSLVDM 514
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 130/251 (51%), Gaps = 9/251 (3%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPFM--IYAQIFKLGFDLDRFAGNALISAFANSG 58
MR +G++P T LL +F V E P++ ++ GF D N++++ + G
Sbjct: 161 MRYEGIQPSSVT--LLSLLFG--VSEVPYVQCLHGCAIFYGFMSDLNLLNSMVNLYGKCG 216
Query: 59 FIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLR 118
I ++F+ +D+++W +L++ Y + E L +M+ G SVL
Sbjct: 217 SIEDCRKLFEFMDRRDVVSWNSLLSAYAQIGDLCEVLLLLKRMKLQGLEPGLQAFGSVLS 276
Query: 119 AAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRD 178
A GD G+ VHG ++ G V LD ++ ++ + MY K G+ + A K+F+ +D
Sbjct: 277 VAVSTGDMRLGRLVHGQILRGGFV-LDAHIETSFIVMYLKGGNINVAFKMFERS--LDKD 333
Query: 179 VVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQ 238
VV W+ +++G VQ A+ VF M + P+ T+ SV++ACA GA + GK +H
Sbjct: 334 VVLWTAMISGLVQNENADKALAVFDQMFKFGMKPSTETMASVITACAQLGAFNLGKSIHG 393
Query: 239 YIECKKVSLNS 249
YI +K+SL++
Sbjct: 394 YILRQKLSLDT 404
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 116/241 (48%), Gaps = 7/241 (2%)
Query: 1 MRQKGVEPDQHTFPLLLKMFS-KPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M + D +TFP LLK S + ++ ++ G D + ++LI+ + G+
Sbjct: 60 MLNANIPSDAYTFPSLLKACSFLNLFHLGNSLHQRVIVNGLSTDSYIASSLINFYVKFGY 119
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
A +VFD ++++ WT +I Y K EA F +MR G ++T++S+L
Sbjct: 120 NDVARKVFDFMPERNVVPWTTVIGCYSKMGDVREAFSLFRQMRYEGIQPSSVTLLSLLFG 179
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
+ + + + +HG + G + D + ++++++Y KCG +D K+F+ M RDV
Sbjct: 180 VS---EVPYVQCLHGCAIFYGFMS-DLNLLNSMVNLYGKCGSIEDCRKLFEFM--DRRDV 233
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQY 239
V W+ L++ Y Q + + + M + P SVLS +G + G+LVH
Sbjct: 234 VSWNSLLSAYAQIGDLCEVLLLLKRMKLQGLEPGLQAFGSVLSVAVSTGDMRLGRLVHGQ 293
Query: 240 I 240
I
Sbjct: 294 I 294
>Medtr1g014340.1 | PPR containing plant-like protein | HC |
chr1:3000992-3003085 | 20130731
Length = 697
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 87/260 (33%), Positives = 143/260 (55%), Gaps = 5/260 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPV-VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
MR+ G EPD T + ++ + ++ I+ ++ GF +D F AL+ + G
Sbjct: 198 MRRFGFEPDSVTITTAISSCARLLDLDRGREIHKELVNSGFRMDSFVSAALVDMYGKCGQ 257
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ A +VF++ K ++AW ++INGY ++ F +M S G T+ S L A
Sbjct: 258 LEMAIEVFEQMPNKTVVAWNSMINGYGFKGDGISCIQLFKRMYSEGVKPTLTTLTSTLMA 317
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
+ + GK+VHG+ ++ R+Q D ++ S+LMD+YFKCG + A +F MP +
Sbjct: 318 CSQSAQLLEGKFVHGYIIR-NRIQPDIFLNSSLMDLYFKCGKVESAETIFKLMPKT--TT 374
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQY 239
V W+V+++GYV K DA+R+F M V P+ T TSVL+AC+ AL++G+ +H
Sbjct: 375 VSWNVMISGYVTEGKLFDALRLFGEMSKSFVEPDAITFTSVLAACSQLAALEKGREIHNL 434
Query: 240 IECKKVSLNSVELGTALVDM 259
I + + N V +G AL+DM
Sbjct: 435 IVERNLGNNEVVMG-ALLDM 453
Score = 120 bits (302), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 141/257 (54%), Gaps = 9/257 (3%)
Query: 6 VEPDQHTFPLLLKM---FSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGS 62
++PD +T+P +LK + V+ MI+ + K G +D G++L+ +A
Sbjct: 102 LKPDSYTYPSVLKACGGLRRVVLGQ--MIHTCLVKEGLMVDIVVGSSLVGMYAKCNEFEC 159
Query: 63 ACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAM 122
A ++FDE KD+ W +I+ Y ++ EAL+ F MR G D++T+ + + + A
Sbjct: 160 AVKLFDEMPDKDVACWNTVISCYYQSGKFEEALRYFGMMRRFGFEPDSVTITTAISSCAR 219
Query: 123 AGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCW 182
D + G+ +H V +G ++D +V +AL+DMY KCG + A +VF++MP + VV W
Sbjct: 220 LLDLDRGREIHKELVNSG-FRMDSFVSAALVDMYGKCGQLEMAIEVFEQMP--NKTVVAW 276
Query: 183 SVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIEC 242
+ ++ GY I++F M S+ V P TLTS L AC+ S L +GK VH YI
Sbjct: 277 NSMINGYGFKGDGISCIQLFKRMYSEGVKPTLTTLTSTLMACSQSAQLLEGKFVHGYIIR 336
Query: 243 KKVSLNSVELGTALVDM 259
++ + + L ++L+D+
Sbjct: 337 NRIQPD-IFLNSSLMDL 352
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 108/213 (50%), Gaps = 4/213 (1%)
Query: 21 SKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTA 80
S ++E F ++ I + D F ++L+ + G + SA +F ++W
Sbjct: 321 SAQLLEGKF-VHGYIIRNRIQPDIFLNSSLMDLYFKCGKVESAETIFKLMPKTTTVSWNV 379
Query: 81 LINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAG 140
+I+GYV +AL+ F +M + DA+T SVL A + G+ +H V+
Sbjct: 380 MISGYVTEGKLFDALRLFGEMSKSFVEPDAITFTSVLAACSQLAALEKGREIHNLIVERN 439
Query: 141 RVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIR 200
+ + V AL+DMY KCG ++A VF +P RD+V W+ ++ Y + +A+
Sbjct: 440 -LGNNEVVMGALLDMYAKCGAVEEAFGVFKCLPE--RDLVSWTSMITAYGSHGRVYEALE 496
Query: 201 VFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
+F ML NV P+ T ++LSAC+H+G +D G
Sbjct: 497 LFAEMLQSNVKPDRVTFLAILSACSHAGLVDDG 529
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 126/252 (50%), Gaps = 6/252 (2%)
Query: 10 QHTFPLLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDE 69
+ PLL + ++ +++ ++ LG D + LIS + + A VFD
Sbjct: 4 RKLIPLLRASVNSKSLKQGKVLHQKVVTLGLQNDVYVCKNLISLYVSCNLFDYAKNVFDV 63
Query: 70 -SSVKDIIAWTALINGYVKNDLPSEALKCFVK-MRSTGTGVDALTVVSVLRAAAMAGDDN 127
+ +I L+ GY +N + EAL F K M D+ T SVL+A
Sbjct: 64 IENPFEISLCNGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKACGGLRRVV 123
Query: 128 FGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVA 187
G+ +H V+ G + +D V S+L+ MY KC + A K+FDEMP +DV CW+ +++
Sbjct: 124 LGQMIHTCLVKEG-LMVDIVVGSSLVGMYAKCNEFECAVKLFDEMP--DKDVACWNTVIS 180
Query: 188 GYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSL 247
Y Q KF++A+R F M P+ T+T+ +S+CA LD+G+ +H+ + +
Sbjct: 181 CYYQSGKFEEALRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIHKELVNSGFRM 240
Query: 248 NSVELGTALVDM 259
+S + ALVDM
Sbjct: 241 DSF-VSAALVDM 251
>Medtr1g014340.2 | PPR containing plant-like protein | HC |
chr1:3000992-3003085 | 20130731
Length = 697
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 87/260 (33%), Positives = 143/260 (55%), Gaps = 5/260 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPV-VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
MR+ G EPD T + ++ + ++ I+ ++ GF +D F AL+ + G
Sbjct: 198 MRRFGFEPDSVTITTAISSCARLLDLDRGREIHKELVNSGFRMDSFVSAALVDMYGKCGQ 257
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ A +VF++ K ++AW ++INGY ++ F +M S G T+ S L A
Sbjct: 258 LEMAIEVFEQMPNKTVVAWNSMINGYGFKGDGISCIQLFKRMYSEGVKPTLTTLTSTLMA 317
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
+ + GK+VHG+ ++ R+Q D ++ S+LMD+YFKCG + A +F MP +
Sbjct: 318 CSQSAQLLEGKFVHGYIIR-NRIQPDIFLNSSLMDLYFKCGKVESAETIFKLMPKT--TT 374
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQY 239
V W+V+++GYV K DA+R+F M V P+ T TSVL+AC+ AL++G+ +H
Sbjct: 375 VSWNVMISGYVTEGKLFDALRLFGEMSKSFVEPDAITFTSVLAACSQLAALEKGREIHNL 434
Query: 240 IECKKVSLNSVELGTALVDM 259
I + + N V +G AL+DM
Sbjct: 435 IVERNLGNNEVVMG-ALLDM 453
Score = 120 bits (302), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 141/257 (54%), Gaps = 9/257 (3%)
Query: 6 VEPDQHTFPLLLKM---FSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGS 62
++PD +T+P +LK + V+ MI+ + K G +D G++L+ +A
Sbjct: 102 LKPDSYTYPSVLKACGGLRRVVLGQ--MIHTCLVKEGLMVDIVVGSSLVGMYAKCNEFEC 159
Query: 63 ACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAM 122
A ++FDE KD+ W +I+ Y ++ EAL+ F MR G D++T+ + + + A
Sbjct: 160 AVKLFDEMPDKDVACWNTVISCYYQSGKFEEALRYFGMMRRFGFEPDSVTITTAISSCAR 219
Query: 123 AGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCW 182
D + G+ +H V +G ++D +V +AL+DMY KCG + A +VF++MP + VV W
Sbjct: 220 LLDLDRGREIHKELVNSG-FRMDSFVSAALVDMYGKCGQLEMAIEVFEQMP--NKTVVAW 276
Query: 183 SVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIEC 242
+ ++ GY I++F M S+ V P TLTS L AC+ S L +GK VH YI
Sbjct: 277 NSMINGYGFKGDGISCIQLFKRMYSEGVKPTLTTLTSTLMACSQSAQLLEGKFVHGYIIR 336
Query: 243 KKVSLNSVELGTALVDM 259
++ + + L ++L+D+
Sbjct: 337 NRIQPD-IFLNSSLMDL 352
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 108/213 (50%), Gaps = 4/213 (1%)
Query: 21 SKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTA 80
S ++E F ++ I + D F ++L+ + G + SA +F ++W
Sbjct: 321 SAQLLEGKF-VHGYIIRNRIQPDIFLNSSLMDLYFKCGKVESAETIFKLMPKTTTVSWNV 379
Query: 81 LINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAG 140
+I+GYV +AL+ F +M + DA+T SVL A + G+ +H V+
Sbjct: 380 MISGYVTEGKLFDALRLFGEMSKSFVEPDAITFTSVLAACSQLAALEKGREIHNLIVERN 439
Query: 141 RVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIR 200
+ + V AL+DMY KCG ++A VF +P RD+V W+ ++ Y + +A+
Sbjct: 440 -LGNNEVVMGALLDMYAKCGAVEEAFGVFKCLPE--RDLVSWTSMITAYGSHGRVYEALE 496
Query: 201 VFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
+F ML NV P+ T ++LSAC+H+G +D G
Sbjct: 497 LFAEMLQSNVKPDRVTFLAILSACSHAGLVDDG 529
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 126/252 (50%), Gaps = 6/252 (2%)
Query: 10 QHTFPLLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDE 69
+ PLL + ++ +++ ++ LG D + LIS + + A VFD
Sbjct: 4 RKLIPLLRASVNSKSLKQGKVLHQKVVTLGLQNDVYVCKNLISLYVSCNLFDYAKNVFDV 63
Query: 70 -SSVKDIIAWTALINGYVKNDLPSEALKCFVK-MRSTGTGVDALTVVSVLRAAAMAGDDN 127
+ +I L+ GY +N + EAL F K M D+ T SVL+A
Sbjct: 64 IENPFEISLCNGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKACGGLRRVV 123
Query: 128 FGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVA 187
G+ +H V+ G + +D V S+L+ MY KC + A K+FDEMP +DV CW+ +++
Sbjct: 124 LGQMIHTCLVKEG-LMVDIVVGSSLVGMYAKCNEFECAVKLFDEMP--DKDVACWNTVIS 180
Query: 188 GYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSL 247
Y Q KF++A+R F M P+ T+T+ +S+CA LD+G+ +H+ + +
Sbjct: 181 CYYQSGKFEEALRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIHKELVNSGFRM 240
Query: 248 NSVELGTALVDM 259
+S + ALVDM
Sbjct: 241 DSF-VSAALVDM 251
>Medtr8g105210.1 | PPR containing plant-like protein | HC |
chr8:44370221-44373841 | 20130731
Length = 959
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 91/263 (34%), Positives = 146/263 (55%), Gaps = 11/263 (4%)
Query: 1 MRQKGVEPDQHTFPLLLK----MFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFAN 56
M V PD++TFP ++K + + P+ + M++ +GF +D F G++LI + +
Sbjct: 168 MLGSNVAPDKYTFPYVIKACGGLNNVPLCK---MVHELARSMGFHMDLFIGSSLIKLYTD 224
Query: 57 SGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSV 116
+G+I A +FDE V+D I W ++NGYVKN + AL F +MR++ ++++ V +
Sbjct: 225 NGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMRNSCVKPNSVSFVCL 284
Query: 117 LRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSY 176
L A G G +HG +++G + D V + ++ MY KCG+ DA K+FD MP +
Sbjct: 285 LSVCATRGIVRAGIQLHGLVIRSG-FESDPTVANTIITMYSKCGNLFDARKIFDIMPQT- 342
Query: 177 RDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLV 236
D V W+ L+AGYVQ +A+ +F M++ V + T S L + SG+L K V
Sbjct: 343 -DTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSITFASFLPSVLKSGSLKYCKEV 401
Query: 237 HQYIECKKVSLNSVELGTALVDM 259
H YI V + V L +ALVD+
Sbjct: 402 HSYIVRHGVPFD-VYLKSALVDI 423
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 107/203 (52%), Gaps = 3/203 (1%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
++ I K G + G+++ +A SG + A Q F VKD + W +I + +N
Sbjct: 502 LHCDILKKGLENVCQVGSSITYMYAKSGRLDLAYQFFRRMPVKDSVCWNLMIVSFSQNGK 561
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
P A+ F +M ++GT D++++ + L A A +GK +H F V+ + D +V S
Sbjct: 562 PELAIDLFRQMGTSGTKFDSVSLSATLSACANYPALYYGKELHCFVVRNSFIS-DTFVAS 620
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV 210
L+DMY KCG A VFD M +++ V W+ ++A Y + ++ + +F M+ +
Sbjct: 621 TLIDMYSKCGKLALARSVFDMM--DWKNEVSWNSIIAAYGNHGRPRECLDLFHEMVEAGI 678
Query: 211 VPNEFTLTSVLSACAHSGALDQG 233
P+ T ++SAC H+G +D+G
Sbjct: 679 QPDHVTFLVIMSACGHAGLVDEG 701
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 134/263 (50%), Gaps = 11/263 (4%)
Query: 1 MRQKGVEPDQHTF----PLLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFAN 56
M GV+ D TF P +LK S ++ +++ I + G D + +AL+ +
Sbjct: 370 MVTSGVKLDSITFASFLPSVLKSGSLKYCKE---VHSYIVRHGVPFDVYLKSALVDIYFK 426
Query: 57 SGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSV 116
G + AC+ F ++++ D+ TA+I+GYV N L EAL F + G + LT+ SV
Sbjct: 427 GGDVEMACKTFQQNTLVDVAVCTAMISGYVLNGLNVEALNLFRWLIQEGMVPNCLTMASV 486
Query: 117 LRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSY 176
L A A GK +H ++ G ++ V S++ MY K G D A + F MP
Sbjct: 487 LPACAALASLKLGKELHCDILKKG-LENVCQVGSSITYMYAKSGRLDLAYQFFRRMP--V 543
Query: 177 RDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLV 236
+D VCW++++ + Q K + AI +F M + + +L++ LSACA+ AL GK +
Sbjct: 544 KDSVCWNLMIVSFSQNGKPELAIDLFRQMGTSGTKFDSVSLSATLSACANYPALYYGKEL 603
Query: 237 HQYIECKKVSLNSVELGTALVDM 259
H ++ + ++ + + L+DM
Sbjct: 604 HCFV-VRNSFISDTFVASTLIDM 625
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 66/154 (42%), Gaps = 1/154 (0%)
Query: 35 IFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEA 94
+ + F D F + LI ++ G + A VFD K+ ++W ++I Y + P E
Sbjct: 607 VVRNSFISDTFVASTLIDMYSKCGKLALARSVFDMMDWKNEVSWNSIIAAYGNHGRPREC 666
Query: 95 LKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMD 154
L F +M G D +T + ++ A AG + G + + + ++ ++D
Sbjct: 667 LDLFHEMVEAGIQPDHVTFLVIMSACGHAGLVDEGIYYFRCMTEEYGICARMEHFACMVD 726
Query: 155 MYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAG 188
+Y + G +A MP++ D W L+
Sbjct: 727 LYGRAGRLHEAFDTIKSMPFT-PDAGTWGSLLGA 759
>Medtr3g011940.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:3127058-3124158 | 20130731
Length = 845
Score = 141 bits (356), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 84/246 (34%), Positives = 134/246 (54%), Gaps = 4/246 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPV-VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M+ GV P + F LL++ K +E I+ Q+ GF+ D F+ ++ + G
Sbjct: 109 MQNDGVRPVVYDFAYLLQLCGKKFELEKGREIHGQVIVNGFEYDLFSMIGVMGFYVKCGE 168
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
I A +VF+ S KD+++WT+LI GY +N P AL F +M+ G D++T+VS+L A
Sbjct: 169 IDDAFKVFERLSEKDLVSWTSLIAGYAQNGYPKRALDLFYRMQEAGLKADSVTLVSILPA 228
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
A D GK +HG+ ++ G + V +AL+ MYF+CG A VF+ M +
Sbjct: 229 VADIKDLRIGKSIHGYALRLG-FESKVSVINALLYMYFECGCERIARLVFEGMI--NKCA 285
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQY 239
V W+ ++ GY Q K ++A F ML + V P + + L+ACA G L++G+ VH+
Sbjct: 286 VSWNTMIDGYAQIGKSEEAFATFLKMLDEGVEPTRVAIMAALTACADLGDLERGRFVHKL 345
Query: 240 IECKKV 245
+ KK+
Sbjct: 346 VLQKKL 351
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 113/209 (54%), Gaps = 3/209 (1%)
Query: 25 VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALING 84
+E ++ + + D + N+L+S ++ + A +F+ K + W A+I G
Sbjct: 336 LERGRFVHKLVLQKKLDFEVPVMNSLLSMYSKCKRVDLAASIFENLKKKTNVTWNAMILG 395
Query: 85 YVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQL 144
Y +N +EAL F M+S D T+V+V+ A A + KW+HG ++ +
Sbjct: 396 YAQNGCVNEALYLFCVMQSQEVKPDCFTLVAVITALADLSVNRMAKWIHGLAIRT-FMDN 454
Query: 145 DGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWN 204
D YV +AL+DMY KCG A K+FD M R V+ W+ ++ GY ++AI +F N
Sbjct: 455 DVYVATALIDMYAKCGATQTARKLFDMM--HERHVITWNAMIDGYGTHGLGKEAIDIFDN 512
Query: 205 MLSDNVVPNEFTLTSVLSACAHSGALDQG 233
M + V+PN+ T SV+SAC+HSG +++G
Sbjct: 513 MQKEAVIPNDTTFLSVISACSHSGFVEEG 541
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 123/265 (46%), Gaps = 15/265 (5%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVED------PFMIYAQIFKLGFDLDRFAGNALISAF 54
M++ G++ D T +L P V D I+ +LGF+ NAL+ +
Sbjct: 210 MQEAGLKADSVTLVSIL-----PAVADIKDLRIGKSIHGYALRLGFESKVSVINALLYMY 264
Query: 55 ANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVV 114
G A VF+ K ++W +I+GY + EA F+KM G + ++
Sbjct: 265 FECGCERIARLVFEGMINKCAVSWNTMIDGYAQIGKSEEAFATFLKMLDEGVEPTRVAIM 324
Query: 115 SVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPY 174
+ L A A GD G++VH +Q ++ + V ++L+ MY KC D A +F+ +
Sbjct: 325 AALTACADLGDLERGRFVHKLVLQK-KLDFEVPVMNSLLSMYSKCKRVDLAASIFENL-- 381
Query: 175 SYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGK 234
+ V W+ ++ GY Q +A+ +F M S V P+ FTL +V++A A K
Sbjct: 382 KKKTNVTWNAMILGYAQNGCVNEALYLFCVMQSQEVKPDCFTLVAVITALADLSVNRMAK 441
Query: 235 LVHQYIECKKVSLNSVELGTALVDM 259
+H + + N V + TAL+DM
Sbjct: 442 WIHG-LAIRTFMDNDVYVATALIDM 465
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 93/197 (47%), Gaps = 3/197 (1%)
Query: 43 DRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMR 102
D LI+ F G I A VFD K + + A++ GY KN +AL + +M+
Sbjct: 51 DHLFQTKLINMFFKHGSINEASLVFDTVEHKQDVLYHAMLKGYAKNSSLCDALCFYHRMQ 110
Query: 103 STGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHC 162
+ G +L+ + G+ +HG + G + D + +M Y KCG
Sbjct: 111 NDGVRPVVYDFAYLLQLCGKKFELEKGREIHGQVIVNG-FEYDLFSMIGVMGFYVKCGEI 169
Query: 163 DDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLS 222
DDA KVF+ + S +D+V W+ L+AGY Q + A+ +F+ M + + TL S+L
Sbjct: 170 DDAFKVFERL--SEKDLVSWTSLIAGYAQNGYPKRALDLFYRMQEAGLKADSVTLVSILP 227
Query: 223 ACAHSGALDQGKLVHQY 239
A A L GK +H Y
Sbjct: 228 AVADIKDLRIGKSIHGY 244
>Medtr1g085700.1 | pentatricopeptide (PPR) repeat protein, putative
| HC | chr1:38304139-38306748 | 20130731
Length = 739
Score = 141 bits (356), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 94/261 (36%), Positives = 140/261 (53%), Gaps = 6/261 (2%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M + G PD +T+PL+LK S +E +Y I + F ALI F
Sbjct: 127 MLRHGFAPDNYTYPLVLKACSSLQAIEIGRWVYHNILINEEKANLFVQCALIDMFVKCES 186
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ A +VFDE +V+D+ WTALI G V N EA+ F KMR G D++ V SVL
Sbjct: 187 LEDARKVFDEMNVRDLATWTALICGNVWNGEWDEAVLLFRKMRLEGLKADSVIVASVLPV 246
Query: 120 AAMAGDD-NFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRD 178
+ G +HG +++G D YV +A++DMY KCG+ D+AC VF M +RD
Sbjct: 247 CGRLMEGLKLGMAMHGCALRSG-FDSDLYVSNAIIDMYCKCGYPDEACLVFSYM--VFRD 303
Query: 179 VVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQ 238
+V WS L+AGY Q ++++ ++ M++ + NE +++VL A QGK +H
Sbjct: 304 IVSWSTLIAGYSQNGMYKESFELYVRMVNMGLTTNEIVVSTVLPALGKLKLFKQGKEMHN 363
Query: 239 YIECKKVSLNSVELGTALVDM 259
++ K+ L V +G+ALVDM
Sbjct: 364 FV-LKQGLLTDVVVGSALVDM 383
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/224 (34%), Positives = 115/224 (51%), Gaps = 4/224 (1%)
Query: 36 FKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEAL 95
+ GFD D + NA+I + G+ AC VF +DI++W+ LI GY +N + E+
Sbjct: 265 LRSGFDSDLYVSNAIIDMYCKCGYPDEACLVFSYMVFRDIVSWSTLIAGYSQNGMYKESF 324
Query: 96 KCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDM 155
+ +V+M + G + + V +VL A GK +H F ++ G + D V SAL+DM
Sbjct: 325 ELYVRMVNMGLTTNEIVVSTVLPALGKLKLFKQGKEMHNFVLKQGLLT-DVVVGSALVDM 383
Query: 156 YFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEF 215
Y CG +A +F M D++ W+ L+AGY FQ A F + PN
Sbjct: 384 YANCGSIKEAESIFRNM--LDMDIMVWNSLIAGYNLVGDFQSAFFTFREIWVAEHRPNHI 441
Query: 216 TLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
TL SVL C GAL QGK +H Y + LN + +G +L+DM
Sbjct: 442 TLVSVLPICTQIGALRQGKEIHCYATRSGLGLN-ISVGNSLIDM 484
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 106/205 (51%), Gaps = 5/205 (2%)
Query: 35 IFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGY-VKNDLPSE 93
+ K G D G+AL+ +AN G I A +F DI+ W +LI GY + D S
Sbjct: 365 VLKQGLLTDVVVGSALVDMYANCGSIKEAESIFRNMLDMDIMVWNSLIAGYNLVGDFQS- 423
Query: 94 ALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALM 153
A F ++ + +T+VSVL G GK +H + ++G + L+ V ++L+
Sbjct: 424 AFFTFREIWVAEHRPNHITLVSVLPICTQIGALRQGKEIHCYATRSG-LGLNISVGNSLI 482
Query: 154 DMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPN 213
DMY KCG + KVF++M ++ + ++ +++ + ++ + M + PN
Sbjct: 483 DMYSKCGFLELGVKVFNQM--MVKNTITYNTMISACGAHGLGEKGLKFYEQMNEAGMKPN 540
Query: 214 EFTLTSVLSACAHSGALDQGKLVHQ 238
+ T S+LSAC+H+G +D+G L++
Sbjct: 541 KVTFISLLSACSHAGLVDRGWLLYN 565
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 76/157 (48%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
I+ + G L+ GN+LI ++ GF+ +VF++ VK+ I + +I+ + L
Sbjct: 462 IHCYATRSGLGLNISVGNSLIDMYSKCGFLELGVKVFNQMMVKNTITYNTMISACGAHGL 521
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
+ LK + +M G + +T +S+L A + AG + G ++ V ++ D +S
Sbjct: 522 GEKGLKFYEQMNEAGMKPNKVTFISLLSACSHAGLVDRGWLLYNSMVNDYGIKPDMEHYS 581
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVA 187
++D+ + G D A K MP + V S+L A
Sbjct: 582 CMVDLIGRTGDLDGAYKFITTMPVTPDANVLGSLLGA 618
>Medtr7g032360.1 | PPR containing plant-like protein | HC |
chr7:11369613-11371524 | 20130731
Length = 541
Score = 141 bits (355), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 88/271 (32%), Positives = 136/271 (50%), Gaps = 40/271 (14%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPF--MIYAQIFKLGFDLDRFAGNALISAFANSG 58
M KG+ P+ TFP L+K S+ +I+A + K GF D F GN+LIS F N G
Sbjct: 119 MLNKGIVPNNLTFPFLVKGCSRLQYGGTVGEVIHAHVLKFGFLNDVFVGNSLISLFMNFG 178
Query: 59 FIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMR--------STGTGV-- 108
+A +VFDE V+D+++W +++ GY++N AL F KM S TG+
Sbjct: 179 LSKNARKVFDEMFVRDVVSWNSMVVGYLRNGEVEMALNLFRKMNGRNIITWNSIITGLVQ 238
Query: 109 -------------------------DALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQ 143
D +T+ SVL A A+ G + GKWVH Y++ ++
Sbjct: 239 AGHAKESLEIFHEMQFLSGDDVVKPDKITIASVLSACALLGSIDHGKWVHA-YLRKNDIE 297
Query: 144 LDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFW 203
D + +AL++MY KCG A ++F++MP +D W+ +++ + + A F
Sbjct: 298 CDVVIGTALVNMYGKCGDVQQAIEIFNDMPE--KDASAWTAMISVFALHGFGKKAFDCFL 355
Query: 204 NMLSDNVVPNEFTLTSVLSACAHSGALDQGK 234
M V PN T +LSAC+HSG ++QG+
Sbjct: 356 EMEKAGVKPNHVTFVGLLSACSHSGLVEQGR 386
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 112/249 (44%), Gaps = 46/249 (18%)
Query: 53 AFANSGFIGSACQVFDESSVKDIIAWTALINGYV------KNDLPSEALKCFVKMRSTGT 106
+F+N A VF ++ + +I Y ++ +AL + +M + G
Sbjct: 65 SFSNYASFNYANNVFHMIKYPELRVYNIMIRSYGCIEGGDDSNCCYKALMLYKQMLNKGI 124
Query: 107 GVDALTVVSVLRAAA-MAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDA 165
+ LT +++ + + G+ +H ++ G + D +V ++L+ ++ G +A
Sbjct: 125 VPNNLTFPFLVKGCSRLQYGGTVGEVIHAHVLKFGFLN-DVFVGNSLISLFMNFGLSKNA 183
Query: 166 CKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVV-------------- 211
KVFDEM RDVV W+ +V GY++ + + A+ +F M N++
Sbjct: 184 RKVFDEM--FVRDVVSWNSMVVGYLRNGEVEMALNLFRKMNGRNIITWNSIITGLVQAGH 241
Query: 212 ---------------------PNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSV 250
P++ T+ SVLSACA G++D GK VH Y+ + + V
Sbjct: 242 AKESLEIFHEMQFLSGDDVVKPDKITIASVLSACALLGSIDHGKWVHAYLRKNDIECDVV 301
Query: 251 ELGTALVDM 259
+GTALV+M
Sbjct: 302 -IGTALVNM 309
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 75/158 (47%), Gaps = 1/158 (0%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
++A + K + D G AL++ + G + A ++F++ KD AWTA+I+ + +
Sbjct: 287 VHAYLRKNDIECDVVIGTALVNMYGKCGDVQQAIEIFNDMPEKDASAWTAMISVFALHGF 346
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
+A CF++M G + +T V +L A + +G G+ + ++ Y ++
Sbjct: 347 GKKAFDCFLEMEKAGVKPNHVTFVGLLSACSHSGLVEQGRCCFDVMKRVYSIEPQIYHYA 406
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAG 188
++D+ + D+A + MP DV W L+ G
Sbjct: 407 CMVDILSRARLFDEALFLIRSMPMK-PDVYVWGALLGG 443
>Medtr7g076020.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:28566228-28568873 | 20130731
Length = 808
Score = 141 bits (355), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 79/238 (33%), Positives = 134/238 (56%), Gaps = 4/238 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFI 60
M + ++ D +TFP +L + +P ++ I K GF+ + NAL+ +A +G +
Sbjct: 328 MHGRNMKIDDYTFPSVLNCCVVGSI-NPKSVHGLIIKTGFENYKLVSNALVDMYAKTGDM 386
Query: 61 GSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAA 120
A VF++ KD+I+WT+L+ GY +N+ E+LK F MR TG D V S+L A
Sbjct: 387 DCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASILSAC 446
Query: 121 AMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVV 180
A FGK VH ++++G ++ V+++L+ MY KCG DDA +F M +DV+
Sbjct: 447 AELTLLEFGKQVHLDFIKSG-LRWSQSVYNSLVAMYAKCGCLDDADAIFVSM--QVKDVI 503
Query: 181 CWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQ 238
W+ ++ GY Q K +++++ + M+S P+ T +L AC+H+G +D+G+ Q
Sbjct: 504 TWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHAGLVDEGRKYFQ 561
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/241 (33%), Positives = 131/241 (54%), Gaps = 12/241 (4%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPF--MIYAQIFKLGFDLDRFAGNALISAFANSG 58
M +GVE +Q+TFP +L S V+ F ++ I K GF + + +AL+ +A G
Sbjct: 227 MHAQGVECNQYTFPTILTACS-SVLARCFGEQVHGFIVKSGFGSNVYVQSALVDMYAKCG 285
Query: 59 FIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLR 118
+ +A + + D+++W +L+ G+V++ L EAL+ F M +D T SVL
Sbjct: 286 DLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLN 345
Query: 119 AAAMAGDDNFGKWVHGFYVQAGRVQLDGY--VWSALMDMYFKCGHCDDACKVFDEMPYSY 176
+ + K VHG ++ G + Y V +AL+DMY K G D A VF++M
Sbjct: 346 CCVVGSIN--PKSVHGLIIKTG---FENYKLVSNALVDMYAKTGDMDCAYTVFEKML--E 398
Query: 177 RDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLV 236
+DV+ W+ LV GY Q N ++++++F +M V P++F + S+LSACA L+ GK V
Sbjct: 399 KDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASILSACAELTLLEFGKQV 458
Query: 237 H 237
H
Sbjct: 459 H 459
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 115/217 (52%), Gaps = 2/217 (0%)
Query: 43 DRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMR 102
D ++ N +IS++ N G + A ++FD S K I W+++I+GY K EA F MR
Sbjct: 66 DEYSWNTMISSYVNVGRLVEARELFDGCSCKSSITWSSIISGYCKFGCKVEAFDLFRSMR 125
Query: 103 STGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHC 162
G T+ SVLR + G G+ +HGF V+ G + + +V + L+DMY KC
Sbjct: 126 LEGWKASQFTLGSVLRVCSSLGLIQTGEMIHGFVVKNG-FEGNVFVVTGLVDMYAKCKCV 184
Query: 163 DDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLS 222
+A +F + + ++ V W+ +V GY Q A+ F M + V N++T ++L+
Sbjct: 185 SEAEFLFKGLEFDRKNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILT 244
Query: 223 ACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
AC+ A G+ VH +I K ++V + +ALVDM
Sbjct: 245 ACSSVLARCFGEQVHGFI-VKSGFGSNVYVQSALVDM 280
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 106/222 (47%), Gaps = 19/222 (8%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
MR GV PDQ +L ++ ++E ++ K G + N+L++ +A G
Sbjct: 427 MRVTGVNPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGC 486
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ A +F VKD+I WTA+I GY +N +LK + M S+GT D +T + +L A
Sbjct: 487 LDDADAIFVSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFA 546
Query: 120 AAMAGDDNFGKWVHGFYVQAGRV---QLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSY 176
+ AG + G+ ++ Q +V + ++ ++D++ + G D+A ++ D+M
Sbjct: 547 CSHAGLVDEGR---KYFQQMNKVYGIKPGPEHYACMIDLFGRSGKLDEAKQLLDQMDVK- 602
Query: 177 RDVVCWSVLVAGYVQCNKFQDAIRVFWNM-LSDNVVPNEFTL 217
D W L++ A RV N+ L++ N F L
Sbjct: 603 PDATVWKSLLS----------ACRVHENLELAERAATNLFEL 634
>Medtr5g018690.1 | PPR containing protein | HC |
chr5:6968759-6971652 | 20130731
Length = 663
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/287 (32%), Positives = 145/287 (50%), Gaps = 36/287 (12%)
Query: 5 GVEPDQHTFPLLLKM-FSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSA 63
G+ P+Q T P +LK +K ++AQ FKLG NA+++ + G I SA
Sbjct: 129 GILPNQFTIPFVLKACAAKSCYWLGVCVHAQSFKLGMGSHACVQNAILNIYVACGLITSA 188
Query: 64 CQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMA 123
+VFD+ S + +++W ++INGY K EA+ F +M+ G D T+V +L +
Sbjct: 189 RRVFDDISERTLVSWNSMINGYSKMGRSEEAVLMFREMQEVGLEPDVFTLVGLLSVSTKH 248
Query: 124 GDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWS 183
G+ + G++VH V G +++D V +ALMDMY KCG+ A VFD+M +DVV W+
Sbjct: 249 GNFDLGRFVHLHMVVTG-IEIDSIVTNALMDMYAKCGNLKCAKSVFDQML--DKDVVSWT 305
Query: 184 VLVAGY-------------------------------VQCNKFQDAIRVFWNMLSDNVVP 212
++ Y VQ + +A+ +F+ M V+
Sbjct: 306 CMINAYANHGLIDCALEFFNQMPGKNVVSWNSIIWCHVQEGLYAEAVDLFYRMCDSGVMA 365
Query: 213 NEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
N+ TL ++LS+C+H G L GK H YI ++L S L A++DM
Sbjct: 366 NDTTLVAILSSCSHMGDLALGKQAHSYIFDNNITL-SATLCNAIIDM 411
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 120/230 (52%), Gaps = 6/230 (2%)
Query: 5 GVEPDQHTFPLLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSAC 64
G+E D L+ M++K +F D D + +I+A+AN G I A
Sbjct: 265 GIEIDSIVTNALMDMYAKC---GNLKCAKSVFDQMLDKDVVSWTCMINAYANHGLIDCAL 321
Query: 65 QVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAG 124
+ F++ K++++W ++I +V+ L +EA+ F +M +G + T+V++L + + G
Sbjct: 322 EFFNQMPGKNVVSWNSIIWCHVQEGLYAEAVDLFYRMCDSGVMANDTTLVAILSSCSHMG 381
Query: 125 DDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSV 184
D GK H Y+ + L + +A++DMY KCG A VF MP ++ V W+V
Sbjct: 382 DLALGKQAHS-YIFDNNITLSATLCNAIIDMYAKCGALQTAMDVFFGMP--EKNAVSWNV 438
Query: 185 LVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGK 234
++ ++AI +F M + V P+E T T +LSAC+HSG +D G+
Sbjct: 439 IIGALALHGYGKEAIEMFEKMQASGVCPDEITFTGLLSACSHSGLVDTGQ 488
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 110/229 (48%), Gaps = 4/229 (1%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
++AQI G L+S+ + A ++FD+ + + LI GY +
Sbjct: 55 VHAQIILHGLATQVLTLGKLVSSSVQLRDLRYAHKLFDQIPQPNKFMFNHLIKGYSNSSD 114
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
P ++L + +M G + T+ VL+A A G VH + G + V +
Sbjct: 115 PIKSLLLYRRMVCDGILPNQFTIPFVLKACAAKSCYWLGVCVHAQSFKLG-MGSHACVQN 173
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV 210
A++++Y CG A +VFD++ S R +V W+ ++ GY + + ++A+ +F M +
Sbjct: 174 AILNIYVACGLITSARRVFDDI--SERTLVSWNSMINGYSKMGRSEEAVLMFREMQEVGL 231
Query: 211 VPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
P+ FTL +LS G D G+ VH ++ + ++S+ + AL+DM
Sbjct: 232 EPDVFTLVGLLSVSTKHGNFDLGRFVHLHMVVTGIEIDSI-VTNALMDM 279
>Medtr7g033400.1 | PPR containing protein | HC |
chr7:12012362-12010888 | 20130731
Length = 486
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 89/239 (37%), Positives = 128/239 (53%), Gaps = 6/239 (2%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK--PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSG 58
MR+ GV P +HTFP LLK S V+ ++A + K G D GN L+ ++ SG
Sbjct: 129 MRRHGVIPGKHTFPFLLKACSSLSNVLPHCKQVHAHVVKFGLCFDCHVGNGLVRGYSVSG 188
Query: 59 FIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLR 118
+ A VFDE +K++ WT +I GY +N +EAL F +M G + T+ SVL
Sbjct: 189 DLVDARYVFDEIPMKNLSLWTTMICGYAQNCCYNEALDLFERMVVVGFEPNGATLASVLS 248
Query: 119 AAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRD 178
A +G G+ +H F G V++ + +AL+ MY K G A K+FDEMP R+
Sbjct: 249 VCARSGCLELGERIHEFMRVKG-VEVGVILGTALVYMYAKNGDILTARKLFDEMP--ERN 305
Query: 179 VVCWSVLVAGYVQCNKFQDAIRVFWNMLSDN-VVPNEFTLTSVLSACAHSGALDQGKLV 236
VV W+ ++ G +DA+ +F M + VVPN T VLSAC H+G +D G+ V
Sbjct: 306 VVTWNAMICGLASHGHVEDALGLFECMKEEEIVVPNAVTFVGVLSACCHAGLIDVGREV 364
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 119/232 (51%), Gaps = 8/232 (3%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGF--IGSACQVFDESSVKDIIAWTALINGYVKN 88
I+AQ+ D+FA + L S+FA S F + A ++F + W LI + +
Sbjct: 58 IHAQMIITSRINDQFATSRLFSSFALSPFGNLEHASRIFSSLHKPNSFMWNTLIRAH-QQ 116
Query: 89 DLPSEALKCFVKMRSTGTGVDALTVVSVLRA-AAMAGDDNFGKWVHGFYVQAGRVQLDGY 147
P +L +++MR G T +L+A ++++ K VH V+ G + D +
Sbjct: 117 QQPHISLSLYIQMRRHGVIPGKHTFPFLLKACSSLSNVLPHCKQVHAHVVKFG-LCFDCH 175
Query: 148 VWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLS 207
V + L+ Y G DA VFDE+P +++ W+ ++ GY Q + +A+ +F M+
Sbjct: 176 VGNGLVRGYSVSGDLVDARYVFDEIPM--KNLSLWTTMICGYAQNCCYNEALDLFERMVV 233
Query: 208 DNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
PN TL SVLS CA SG L+ G+ +H+++ K V + + LGTALV M
Sbjct: 234 VGFEPNGATLASVLSVCARSGCLELGERIHEFMRVKGVEVGVI-LGTALVYM 284
>Medtr3g109380.2 | PPR containing plant-like protein | HC |
chr3:50595856-50594240 | 20130731
Length = 538
Score = 138 bits (347), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 83/258 (32%), Positives = 134/258 (51%), Gaps = 35/258 (13%)
Query: 8 PDQHTFPLLLKMFSKPVVEDPFM-IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQV 66
PD+ TFP ++K + + M ++ ++K G D NALI + G + +AC+V
Sbjct: 109 PDKFTFPFVIKSCTGILCHRLGMQVHGLVYKFGADFHCITENALIDMYTKFGDLTNACKV 168
Query: 67 FDESSVKDIIAWTALINGYVK-----------NDLP--------------------SEAL 95
F+E S +D+I+W +LI GYVK +D+P +AL
Sbjct: 169 FEEMSHRDVISWNSLIFGYVKLGQMNSARELFDDMPVRTIVSWTTMITGYGRMGCYGDAL 228
Query: 96 KCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDM 155
F +M+ G D +++++VL A A G GKW+H + + G ++ G + +AL++M
Sbjct: 229 DVFREMQMVGIEPDEISIIAVLPACAQLGALEVGKWIHMYADKNGFLRKTG-ICNALIEM 287
Query: 156 YFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEF 215
Y KCG D+A +FD++ +DV+ WS ++ G K +AI++F M V PNE
Sbjct: 288 YAKCGCIDEAWNLFDQL--VEKDVISWSTMIGGLANHGKGYEAIQLFEEMCKVRVAPNEI 345
Query: 216 TLTSVLSACAHSGALDQG 233
T VL AC+H+G D+G
Sbjct: 346 TFLGVLLACSHTGLWDEG 363
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 112/261 (42%), Gaps = 34/261 (13%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
I+A + KL F ++ + N G + A +F + +I + A+I Y N
Sbjct: 29 IHAHVVKLSLSQSNFLVTKMLDSCDNLGHVSYATLLFKQLLHPNIFTYNAIIRTYAHNRH 88
Query: 91 PSEALKCFVKMRSTGTGV---DALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGY 147
S A+ FV+M + T D T V+++ G VHG + G
Sbjct: 89 HSSAISVFVQMLTHSTNSVFPDKFTFPFVIKSCTGILCHRLGMQVHGLVYKFG-ADFHCI 147
Query: 148 VWSALMDMYFKCGHCDDACKVFDEMPYS-----------------------------YRD 178
+AL+DMY K G +ACKVF+EM + R
Sbjct: 148 TENALIDMYTKFGDLTNACKVFEEMSHRDVISWNSLIFGYVKLGQMNSARELFDDMPVRT 207
Query: 179 VVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQ 238
+V W+ ++ GY + + DA+ VF M + P+E ++ +VL ACA GAL+ GK +H
Sbjct: 208 IVSWTTMITGYGRMGCYGDALDVFREMQMVGIEPDEISIIAVLPACAQLGALEVGKWIHM 267
Query: 239 YIECKKVSLNSVELGTALVDM 259
Y + K L + AL++M
Sbjct: 268 YAD-KNGFLRKTGICNALIEM 287
>Medtr3g109380.1 | PPR containing plant-like protein | HC |
chr3:50595856-50594240 | 20130731
Length = 538
Score = 138 bits (347), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 83/258 (32%), Positives = 134/258 (51%), Gaps = 35/258 (13%)
Query: 8 PDQHTFPLLLKMFSKPVVEDPFM-IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQV 66
PD+ TFP ++K + + M ++ ++K G D NALI + G + +AC+V
Sbjct: 109 PDKFTFPFVIKSCTGILCHRLGMQVHGLVYKFGADFHCITENALIDMYTKFGDLTNACKV 168
Query: 67 FDESSVKDIIAWTALINGYVK-----------NDLP--------------------SEAL 95
F+E S +D+I+W +LI GYVK +D+P +AL
Sbjct: 169 FEEMSHRDVISWNSLIFGYVKLGQMNSARELFDDMPVRTIVSWTTMITGYGRMGCYGDAL 228
Query: 96 KCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDM 155
F +M+ G D +++++VL A A G GKW+H + + G ++ G + +AL++M
Sbjct: 229 DVFREMQMVGIEPDEISIIAVLPACAQLGALEVGKWIHMYADKNGFLRKTG-ICNALIEM 287
Query: 156 YFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEF 215
Y KCG D+A +FD++ +DV+ WS ++ G K +AI++F M V PNE
Sbjct: 288 YAKCGCIDEAWNLFDQL--VEKDVISWSTMIGGLANHGKGYEAIQLFEEMCKVRVAPNEI 345
Query: 216 TLTSVLSACAHSGALDQG 233
T VL AC+H+G D+G
Sbjct: 346 TFLGVLLACSHTGLWDEG 363
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 112/261 (42%), Gaps = 34/261 (13%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
I+A + KL F ++ + N G + A +F + +I + A+I Y N
Sbjct: 29 IHAHVVKLSLSQSNFLVTKMLDSCDNLGHVSYATLLFKQLLHPNIFTYNAIIRTYAHNRH 88
Query: 91 PSEALKCFVKMRSTGTGV---DALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGY 147
S A+ FV+M + T D T V+++ G VHG + G
Sbjct: 89 HSSAISVFVQMLTHSTNSVFPDKFTFPFVIKSCTGILCHRLGMQVHGLVYKFG-ADFHCI 147
Query: 148 VWSALMDMYFKCGHCDDACKVFDEMPYS-----------------------------YRD 178
+AL+DMY K G +ACKVF+EM + R
Sbjct: 148 TENALIDMYTKFGDLTNACKVFEEMSHRDVISWNSLIFGYVKLGQMNSARELFDDMPVRT 207
Query: 179 VVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQ 238
+V W+ ++ GY + + DA+ VF M + P+E ++ +VL ACA GAL+ GK +H
Sbjct: 208 IVSWTTMITGYGRMGCYGDALDVFREMQMVGIEPDEISIIAVLPACAQLGALEVGKWIHM 267
Query: 239 YIECKKVSLNSVELGTALVDM 259
Y + K L + AL++M
Sbjct: 268 YAD-KNGFLRKTGICNALIEM 287
>Medtr1g112500.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:50925869-50923259 | 20130731
Length = 710
Score = 137 bits (346), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 83/253 (32%), Positives = 141/253 (55%), Gaps = 5/253 (1%)
Query: 8 PDQHTFPLLLKMFSKPVVEDPFM-IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQV 66
PD T+P+++K S+ + D + ++ Q K GFDL+ F N+L++ + N G +A V
Sbjct: 112 PDHFTYPIVIKACSELLFVDMGVGVHGQTAKCGFDLNSFVQNSLLAMYMNVGEKEAARLV 171
Query: 67 FDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDD 126
F+ + +++W LING +N+ +AL+ + +M G GVD TVVSVL+A + +
Sbjct: 172 FELMQERTVVSWNTLINGLFRNNCAEDALRVYSRMVDEGVGVDCATVVSVLQACGVLKNV 231
Query: 127 NFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLV 186
G+ V ++ G + V +AL+DMY KCG ++A + + M +DVV W+ L+
Sbjct: 232 ELGREVRALTLEKGYWG-NVVVRNALLDMYVKCGEMEEARLLLNGM--EEKDVVTWTTLI 288
Query: 187 AGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVS 246
GYV + A+ + +M + V PN ++ S+LSAC +L GK +H + + +
Sbjct: 289 NGYVVNGDARSALMLCRSMQLEGVKPNLVSVASLLSACGDLVSLKHGKCLHAWAIRQNIE 348
Query: 247 LNSVELGTALVDM 259
+ V + TAL+DM
Sbjct: 349 -SEVVMETALIDM 360
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 133/261 (50%), Gaps = 4/261 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPV-VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M+ +GV+P+ + LL V ++ ++A + + + ALI +A
Sbjct: 307 MQLEGVKPNLVSVASLLSACGDLVSLKHGKCLHAWAIRQNIESEVVMETALIDMYAKCNE 366
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ +VF ++S K W A+++G+V N L A++ F +M D+ T S+L A
Sbjct: 367 GNLSYKVFMKTSKKRTAPWNAVLSGFVHNRLARNAVQLFKEMLLENVQPDSPTFNSLLPA 426
Query: 120 AAMAGDDNFGKWVHGFYVQAGRV-QLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRD 178
A+ D +H + V+ G + +L+ V S L+D+Y KCG A ++FD +P +D
Sbjct: 427 YAILADLKQAMNMHCYLVKLGFLCKLE--VASMLVDIYSKCGTLGYAHQIFDMIPLKDKD 484
Query: 179 VVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQ 238
++ W+ ++ Y + + A+ +F M+ PNE T TSVL AC+H+G +DQG +
Sbjct: 485 IIIWTAIIDAYGKHGYGEMAVSLFNQMVQSGEKPNEVTFTSVLHACSHAGLVDQGLSLFN 544
Query: 239 YIECKKVSLNSVELGTALVDM 259
+ K + SV+ T +VD+
Sbjct: 545 LMLKKYQVIPSVDHYTCIVDL 565
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 121/250 (48%), Gaps = 5/250 (2%)
Query: 11 HTFPLLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDES 70
H LL K + + + ++A I G + L + +A A Q+FD+
Sbjct: 14 HFESLLRKYSASNSLSETKKLHALIITYGLFSSSQLSSKLATTYAQCHHASYASQLFDKL 73
Query: 71 SVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGV-DALTVVSVLRAAAMAGDDNFG 129
+++ +W ++ YV+ P +AL FV+M +G + D T V++A + + G
Sbjct: 74 PKRNLFSWNTMMRMYVQMGRPHDALNMFVEMLHSGRAMPDHFTYPIVIKACSELLFVDMG 133
Query: 130 KWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGY 189
VHG + G L+ +V ++L+ MY G + A VF+ M R VV W+ L+ G
Sbjct: 134 VGVHGQTAKCG-FDLNSFVQNSLLAMYMNVGEKEAARLVFELM--QERTVVSWNTLINGL 190
Query: 190 VQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNS 249
+ N +DA+RV+ M+ + V + T+ SVL AC ++ G+ V + + +K +
Sbjct: 191 FRNNCAEDALRVYSRMVDEGVGVDCATVVSVLQACGVLKNVELGREV-RALTLEKGYWGN 249
Query: 250 VELGTALVDM 259
V + AL+DM
Sbjct: 250 VVVRNALLDM 259
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 97/206 (47%), Gaps = 3/206 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPV-VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M + V+PD TF LL ++ ++ ++ + KLGF + L+ ++ G
Sbjct: 408 MLLENVQPDSPTFNSLLPAYAILADLKQAMNMHCYLVKLGFLCKLEVASMLVDIYSKCGT 467
Query: 60 IGSACQVFDESSVKD--IIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVL 117
+G A Q+FD +KD II WTA+I+ Y K+ A+ F +M +G + +T SVL
Sbjct: 468 LGYAHQIFDMIPLKDKDIIIWTAIIDAYGKHGYGEMAVSLFNQMVQSGEKPNEVTFTSVL 527
Query: 118 RAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYR 177
A + AG + G + ++ +V ++ ++D+ + G +DA + MP ++
Sbjct: 528 HACSHAGLVDQGLSLFNLMLKKYQVIPSVDHYTCIVDLLGRAGRLNDAYNLIRTMPITHN 587
Query: 178 DVVCWSVLVAGYVQCNKFQDAIRVFW 203
V ++L A + N I W
Sbjct: 588 HAVWGALLGACVIHENVELGEIAARW 613
>Medtr7g023780.1 | editing factor 22 | HC | chr7:7790817-7787040 |
20130731
Length = 719
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/260 (31%), Positives = 141/260 (54%), Gaps = 4/260 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPV-VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M+ G+ PD+ TFP +LK S+ + +++A + GF F N L++ +A G
Sbjct: 136 MKWVGLHPDKFTFPCVLKACSELLDFGLSCLVHAHVIVYGFGSHVFVQNGLVALYAKCGR 195
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
IG A VFD + I++WTA+++GY +N P EAL+ F +MR T D +++VSV+RA
Sbjct: 196 IGMARMVFDRLYDRTIVSWTAIVSGYGQNGEPWEALRMFDQMRKTDVKPDWISLVSVMRA 255
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
D G+ +HG ++ G ++ + + +L Y KCG A FD+M + V
Sbjct: 256 YTDVDDLEQGRSLHGCIIKMG-LEEEPDLLISLTAFYAKCGEVTVAKSFFDKMK-TPNKV 313
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQY 239
+ W+ +++GY + ++A+ +F M+S N+ P+ TL S + ACA G+L + + Y
Sbjct: 314 MMWNAMISGYAKNGHAEEAVELFQAMISRNIKPDSITLRSAVLACAQVGSLKLAQWMDDY 373
Query: 240 IECKKVSLNSVELGTALVDM 259
+ K + + T L+DM
Sbjct: 374 VRKSKYG-GDIFVNTTLIDM 392
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 123/235 (52%), Gaps = 5/235 (2%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
MR+ V+PD + +++ ++ +E ++ I K+G + + +L + +A G
Sbjct: 237 MRKTDVKPDWISLVSVMRAYTDVDDLEQGRSLHGCIIKMGLEEEPDLLISLTAFYAKCGE 296
Query: 60 IGSACQVFDESSVKD-IIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLR 118
+ A FD+ + ++ W A+I+GY KN EA++ F M S D++T+ S +
Sbjct: 297 VTVAKSFFDKMKTPNKVMMWNAMISGYAKNGHAEEAVELFQAMISRNIKPDSITLRSAVL 356
Query: 119 AAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRD 178
A A G +W+ YV+ + D +V + L+DMY KCG + A VFD S +D
Sbjct: 357 ACAQVGSLKLAQWMDD-YVRKSKYGGDIFVNTTLIDMYAKCGSVESARLVFDRA--SVKD 413
Query: 179 VVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
VV WS ++ GY + +AI ++ M + V PN+ T +L+AC+HSG + QG
Sbjct: 414 VVMWSAMIMGYGLHGQGWEAIYLYHAMKQEGVCPNDVTFIGLLTACSHSGLIKQG 468
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 103/209 (49%), Gaps = 3/209 (1%)
Query: 29 FMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKN 88
+ ++ Q+ G +RF L++ +N G I A ++FDE D+ W A+I Y +N
Sbjct: 64 YQVHNQLVLSGLQHNRFLMTKLVNQSSNLGQIFYARKLFDEFPDPDLFMWNAIIRTYSRN 123
Query: 89 DLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYV 148
++ ++ + M+ G D T VL+A + D VH + G +V
Sbjct: 124 NMYRNVIEMYRWMKWVGLHPDKFTFPCVLKACSELLDFGLSCLVHAHVIVYG-FGSHVFV 182
Query: 149 WSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSD 208
+ L+ +Y KCG A VFD + Y R +V W+ +V+GY Q + +A+R+F M
Sbjct: 183 QNGLVALYAKCGRIGMARMVFDRL-YD-RTIVSWTAIVSGYGQNGEPWEALRMFDQMRKT 240
Query: 209 NVVPNEFTLTSVLSACAHSGALDQGKLVH 237
+V P+ +L SV+ A L+QG+ +H
Sbjct: 241 DVKPDWISLVSVMRAYTDVDDLEQGRSLH 269
>Medtr4g094592.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:38323846-38321575 | 20130731
Length = 628
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/268 (32%), Positives = 140/268 (52%), Gaps = 12/268 (4%)
Query: 1 MRQKGVE-PDQHTFPLLLKMFSKPV-VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSG 58
MR GV PD+ TFP +++ V + I+ +FK G +LD F G+AL++ +
Sbjct: 123 MRLLGVVIPDKFTFPCVIRACGDAGDVFEVKKIHGLLFKFGLELDVFVGSALVTTYLKFW 182
Query: 59 FIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLR 118
+ A +VF+E V+D++ W +++NGY + EAL F +M G TV VL
Sbjct: 183 LVVDAHEVFEELPVRDVVLWNSMVNGYAQIGCFEEALGMFRRMVENGVVPCRYTVTGVLS 242
Query: 119 AAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRD 178
++ GD + G+ VHGF + G V +AL+DMY KC DA VF+ M +D
Sbjct: 243 IYSVIGDFDNGQAVHGFLTKMG-YHSSVVVLNALIDMYGKCKCASDALNVFEVM--DEKD 299
Query: 179 VVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQ 238
+ W+ +++ + +C +++F ML + V P+ T+T+VL AC H AL G+ +H
Sbjct: 300 MFSWNSIISVHQRCGDHYGTLKLFDRMLGNKVQPDLVTVTTVLPACTHLAALMHGREIHG 359
Query: 239 YI-------ECKKVSLNSVELGTALVDM 259
Y+ E + + V L AL+DM
Sbjct: 360 YMIVNGLGKEGRNNDFDDVLLNNALMDM 387
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 79/232 (34%), Positives = 126/232 (54%), Gaps = 7/232 (3%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSV--KDIIAWTALINGYVKN 88
++ + K GF A ++I+ ++ I A +VF+ + K++ A+ A+I G+V N
Sbjct: 51 LHTHLLKNGFFASPLAITSIINMYSKCTLINYALKVFNYPTHHDKNVFAYNAIIAGFVSN 110
Query: 89 DLPSEALKCFVKMRSTGTGV-DALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGY 147
L + + +MR G + D T V+RA AGD K +HG + G ++LD +
Sbjct: 111 GLSQHSFGLYKQMRLLGVVIPDKFTFPCVIRACGDAGDVFEVKKIHGLLFKFG-LELDVF 169
Query: 148 VWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLS 207
V SAL+ Y K DA +VF+E+P RDVV W+ +V GY Q F++A+ +F M+
Sbjct: 170 VGSALVTTYLKFWLVVDAHEVFEELP--VRDVVLWNSMVNGYAQIGCFEEALGMFRRMVE 227
Query: 208 DNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
+ VVP +T+T VLS + G D G+ VH ++ K +SV + AL+DM
Sbjct: 228 NGVVPCRYTVTGVLSIYSVIGDFDNGQAVHGFLT-KMGYHSSVVVLNALIDM 278
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 128/269 (47%), Gaps = 14/269 (5%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVED---PFMIYAQIFKLGFDLDRFAGNALISAFANS 57
M + GV P ++T +L ++S V+ D ++ + K+G+ NALI +
Sbjct: 225 MVENGVVPCRYTVTGVLSIYS--VIGDFDNGQAVHGFLTKMGYHSSVVVLNALIDMYGKC 282
Query: 58 GFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVL 117
A VF+ KD+ +W ++I+ + + LK F +M D +TV +VL
Sbjct: 283 KCASDALNVFEVMDEKDMFSWNSIISVHQRCGDHYGTLKLFDRMLGNKVQPDLVTVTTVL 342
Query: 118 RAAAMAGDDNFGKWVHGFYVQAGRVQL-------DGYVWSALMDMYFKCGHCDDACKVFD 170
A G+ +HG+ + G + D + +ALMDMY KCG DA VFD
Sbjct: 343 PACTHLAALMHGREIHGYMIVNGLGKEGRNNDFDDVLLNNALMDMYAKCGSMRDARMVFD 402
Query: 171 EMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGAL 230
M + +DV W++++ GY +A+ F M +VPNE + +LSAC+H+G +
Sbjct: 403 NM--TEKDVASWNIMITGYGMHGYGDEALDTFTRMRQAQLVPNEISFVGLLSACSHAGMV 460
Query: 231 DQGKLVHQYIECKKVSLNSVELGTALVDM 259
+G ++ K SVE T ++DM
Sbjct: 461 KEGLEFLAEMDSKYGVPPSVEHYTCVIDM 489
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 67/156 (42%), Gaps = 4/156 (2%)
Query: 43 DRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMR 102
D NAL+ +A G + A VFD + KD+ +W +I GY + EAL F +MR
Sbjct: 377 DVLLNNALMDMYAKCGSMRDARMVFDNMTEKDVASWNIMITGYGMHGYGDEALDTFTRMR 436
Query: 103 STGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHC 162
+ ++ V +L A + AG G V ++ ++DM + G
Sbjct: 437 QAQLVPNEISFVGLLSACSHAGMVKEGLEFLAEMDSKYGVPPSVEHYTCVIDMLCRAGKL 496
Query: 163 DDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDA 198
+A + MP+ D V W L+A C ++D
Sbjct: 497 VEAYDLMLTMPFK-ADPVGWRALLAA---CRIYKDT 528
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 77/150 (51%), Gaps = 3/150 (2%)
Query: 109 DALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKV 168
D T ++ L+ A + GK +H ++ G +++++MY KC + A KV
Sbjct: 28 DIGTCITSLQQCAQTTNLTKGKQLHTHLLKNGFFA-SPLAITSIINMYSKCTLINYALKV 86
Query: 169 FDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNM-LSDNVVPNEFTLTSVLSACAHS 227
F+ + ++V ++ ++AG+V Q + ++ M L V+P++FT V+ AC +
Sbjct: 87 FNYPTHHDKNVFAYNAIIAGFVSNGLSQHSFGLYKQMRLLGVVIPDKFTFPCVIRACGDA 146
Query: 228 GALDQGKLVHQYIECKKVSLNSVELGTALV 257
G + + K +H + + L+ V +G+ALV
Sbjct: 147 GDVFEVKKIHGLLFKFGLELD-VFVGSALV 175
>Medtr5g043450.1 | PPR containing plant-like protein | HC |
chr5:19108134-19105482 | 20130731
Length = 828
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/228 (33%), Positives = 130/228 (57%), Gaps = 3/228 (1%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
++ +I K GF DR G +L+ + F+ A +VFDE V+D++ W+++I+ YV+N +
Sbjct: 124 LHGRILKSGFCEDRVIGTSLVGMYGELCFLRDAKKVFDEMCVRDLVLWSSIISCYVENGV 183
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
E L+ F M G D++ ++SV A G K VHG+ ++ G V DG + +
Sbjct: 184 YREGLEMFRSMICEGIRPDSVMLLSVAEACGKIGCLRLAKSVHGYVMREGMVG-DGSLSN 242
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV 210
+L+ MY +CG+ A ++F+ + R CW+ +++ Y Q F++A+ VF M V
Sbjct: 243 SLIVMYSQCGYLCRAKRLFECI--DDRSTSCWTSMISAYNQNECFEEALDVFIKMQDSEV 300
Query: 211 VPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVD 258
PN+ T+ SVL++CA G L +GK VH ++ + + ++LG AL+D
Sbjct: 301 EPNDVTMISVLNSCARLGRLKEGKSVHCFVLRNAMGVTGLDLGPALID 348
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 114/205 (55%), Gaps = 4/205 (1%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
I+ + K GF D F N+L+ ++ GF SA +F++ K I+AW +I G+ +N +
Sbjct: 428 IHGHVMKRGF-FDEFVQNSLMDMYSKCGFASSAYTIFNKIKHKSIVAWNCMICGFSQNGI 486
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
EAL F +M ++ +T +S ++A + G + GKW+H + G Q D Y+ +
Sbjct: 487 SVEALSLFDEMFKNRLEINKVTFLSAIQACSNLGYLDKGKWIHHKIIVTGN-QNDLYIDT 545
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV 210
AL+DMY KCG A KVFD + + VV WS ++A + + A +F M+ N+
Sbjct: 546 ALVDMYAKCGDLQTAQKVFDSIV--EKSVVSWSTMIAAHGIHGQINAATSLFHKMVLSNI 603
Query: 211 VPNEFTLTSVLSACAHSGALDQGKL 235
PNE T ++LSAC H+G++ +GK
Sbjct: 604 KPNEVTFMNILSACRHAGSVKEGKF 628
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 118/221 (53%), Gaps = 9/221 (4%)
Query: 39 GFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCF 98
G DL G ALI ++ + S ++ ++I++W LI+ Y + L EA+ F
Sbjct: 339 GLDL----GPALIDFYSACWKMSSCEKLLHSIGNENIVSWNTLISFYAREGLNDEAMAFF 394
Query: 99 VKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFK 158
M + G D+ ++ S + A+A +G FG+ +HG ++ G D +V ++LMDMY K
Sbjct: 395 ACMVAKGIMPDSFSLASSISASASSGSIQFGQQIHGHVMKRGF--FDEFVQNSLMDMYSK 452
Query: 159 CGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLT 218
CG A +F+++ ++ +V W+ ++ G+ Q +A+ +F M + + N+ T
Sbjct: 453 CGFASSAYTIFNKIK--HKSIVAWNCMICGFSQNGISVEALSLFDEMFKNRLEINKVTFL 510
Query: 219 SVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
S + AC++ G LD+GK +H I + N + + TALVDM
Sbjct: 511 SAIQACSNLGYLDKGKWIHHKIIVTG-NQNDLYIDTALVDM 550
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 106/213 (49%), Gaps = 6/213 (2%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
++A + + A L+ +++ G + S+ VF D ++ LI ++ N L
Sbjct: 20 LHAHLVVTSLHNNPLASTKLLESYSQMGSLQSSRLVFYTHPSPDSFMFSVLIKCHLWNHL 79
Query: 91 PSEALKCF---VKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGY 147
E L F ++M S T A SV+RA G+ G+ +HG +++G + D
Sbjct: 80 FREVLSLFNHHIQMGSKLTQNCAFLYPSVIRAVTGVGELIVGRKLHGRILKSGFCE-DRV 138
Query: 148 VWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLS 207
+ ++L+ MY + DA KVFDEM RD+V WS +++ YV+ +++ + +F +M+
Sbjct: 139 IGTSLVGMYGELCFLRDAKKVFDEM--CVRDLVLWSSIISCYVENGVYREGLEMFRSMIC 196
Query: 208 DNVVPNEFTLTSVLSACAHSGALDQGKLVHQYI 240
+ + P+ L SV AC G L K VH Y+
Sbjct: 197 EGIRPDSVMLLSVAEACGKIGCLRLAKSVHGYV 229
>Medtr7g089260.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:34908078-34912174 | 20130731
Length = 1099
Score = 135 bits (340), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 145/262 (55%), Gaps = 7/262 (2%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPV-VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M+ +GV+ D T +L + ++ V + +I+ + K G D D F NALI+ ++ G
Sbjct: 213 MKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGR 272
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ A VFD+ V+D+++W ++I Y +N+ PS AL+ F M+ G D LTVVS+
Sbjct: 273 LQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSI 332
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
+ D + + GF ++ + D + +AL++MY K G+ + A VFD++P +D
Sbjct: 333 FSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLP--RKDT 390
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSD--NVVPNEFTLTSVLSACAHSGALDQGKLVH 237
+ W+ LV GY Q +AI + NM+ + + +PN+ T S++ A +H GAL QG +H
Sbjct: 391 ISWNTLVTGYTQNGLASEAIDAY-NMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIH 449
Query: 238 QYIECKKVSLNSVELGTALVDM 259
+ + L+ V + T L+D+
Sbjct: 450 AKLIKNSLYLD-VFVATCLIDL 470
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/239 (32%), Positives = 129/239 (53%), Gaps = 10/239 (4%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK---PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANS 57
M+ G+ PD T L +FS+ + + + I + D D GNAL++ +A
Sbjct: 314 MQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFV-IRREWLDKDVVIGNALVNMYAKL 372
Query: 58 GFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRS-TGTGVDALTVVSV 116
G++ A VFD+ KD I+W L+ GY +N L SEA+ + M T + T VS+
Sbjct: 373 GYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSI 432
Query: 117 LRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSY 176
+ A + G G +H ++ + LD +V + L+D+Y KCG +DA +F E+P
Sbjct: 433 IPAYSHVGALQQGMKIHAKLIK-NSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIP--- 488
Query: 177 RDV-VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGK 234
RD V W+ ++A + ++A+++F +ML++ V + T S+LSAC+HSG +D+G+
Sbjct: 489 RDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQ 547
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 133/254 (52%), Gaps = 5/254 (1%)
Query: 6 VEPDQHTFPLLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQ 65
+ PD +TFP +LK V D ++ +FK+GF+ D F +L+ ++ G + A +
Sbjct: 120 LRPDFYTFPPILKACVSLV--DGKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHK 177
Query: 66 VFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGD 125
VF + VKD+ +W A+I+G+ +N + AL +M+ G +D +TV S+L A + D
Sbjct: 178 VFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDD 237
Query: 126 DNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVL 185
G +H ++ G + D +V +AL++MY K G DA VFD+M RD+V W+ +
Sbjct: 238 VINGVLIHLHVLKHG-LDSDVFVSNALINMYSKFGRLQDAQMVFDQM--EVRDLVSWNSI 294
Query: 186 VAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKV 245
+A Y Q N A+R F M + P+ T+ S+ S + + + ++ ++
Sbjct: 295 IAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREW 354
Query: 246 SLNSVELGTALVDM 259
V +G ALV+M
Sbjct: 355 LDKDVVIGNALVNM 368
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 112/234 (47%), Gaps = 13/234 (5%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
++A + G + LI+ + G I + FD K+I +W ++I+ YV+
Sbjct: 41 LHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRFGK 100
Query: 91 PSEALKCFVKMRSTGTG----VDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDG 146
EA+ C ++ S G D T +L+A D GK VH + G + D
Sbjct: 101 YHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVD---GKKVHCCVFKMG-FEDDV 156
Query: 147 YVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNML 206
+V ++L+ +Y + G D A KVF +MP +DV W+ +++G+ Q A+ V M
Sbjct: 157 FVAASLVHLYSRYGVLDVAHKVFVDMP--VKDVGSWNAMISGFCQNGNAAGALGVLNRMK 214
Query: 207 SDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNS-VELGTALVDM 259
+ V + T+ S+L CA S + G L+H ++ K L+S V + AL++M
Sbjct: 215 GEGVKMDTITVASILPVCAQSDDVINGVLIHLHV--LKHGLDSDVFVSNALINM 266
>Medtr8g086040.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:35708903-35705786 | 20130731
Length = 616
Score = 134 bits (337), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 85/280 (30%), Positives = 135/280 (48%), Gaps = 39/280 (13%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNA----------- 49
M V P TF L + P + ++A +F GF D + GN
Sbjct: 103 MLNNNVSPVSFTFSALFSLLKNPSLGSQLHLHAFLF--GFVNDLYVGNTIIHMYVKFGVL 160
Query: 50 --------------------LISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKND 89
LI A+A SG + SAC++F VKD++AWT+++ GY +N
Sbjct: 161 DCARKVFDEMPHRDVVTWTELIVAYARSGDMDSACELFVGLPVKDMVAWTSMVTGYSQNA 220
Query: 90 LPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDG--Y 147
+P +AL+ F KMR G D +T+V + A A G + W+ ++ R +
Sbjct: 221 MPKKALQFFRKMREAGVVTDEITLVGAISACAQLGVSGYADWIREI-AESSRFGSGSNVF 279
Query: 148 VWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLS 207
V SAL+DMY KCG+ ++A VF M +V +S ++ G+ + + AI++F+ ML
Sbjct: 280 VGSALIDMYSKCGNVEEAYNVFKGM--KEMNVFSYSSMIVGFAVHGRARSAIKLFYEMLE 337
Query: 208 DNVVPNEFTLTSVLSACAHSGALDQG-KLVHQYIECKKVS 246
+ + PN T + +AC+H+G ++QG +L EC VS
Sbjct: 338 NGIKPNHVTFVGLFTACSHAGMVEQGQQLFGAMKECYGVS 377
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 97/227 (42%), Gaps = 40/227 (17%)
Query: 66 VFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALT---VVSVLRAAAM 122
+F + + ++ALI Y +N +++ + M + + T + S+L+ ++
Sbjct: 68 LFSQVHSPNPFLYSALIRAYARNGPFHHSIRLYTSMLNNNVSPVSFTFSALFSLLKNPSL 127
Query: 123 AGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYS------- 175
+ ++ GF D YV + ++ MY K G D A KVFDEMP+
Sbjct: 128 GSQLHLHAFLFGFVN-------DLYVGNTIIHMYVKFGVLDCARKVFDEMPHRDVVTWTE 180
Query: 176 ----------------------YRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPN 213
+D+V W+ +V GY Q + A++ F M VV +
Sbjct: 181 LIVAYARSGDMDSACELFVGLPVKDMVAWTSMVTGYSQNAMPKKALQFFRKMREAGVVTD 240
Query: 214 EFTLTSVLSACAHSGALDQGKLVHQYIECKKV-SLNSVELGTALVDM 259
E TL +SACA G + + E + S ++V +G+AL+DM
Sbjct: 241 EITLVGAISACAQLGVSGYADWIREIAESSRFGSGSNVFVGSALIDM 287
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 94/215 (43%), Gaps = 5/215 (2%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVE---DPFMIYAQIFKLGFDLDRFAGNALISAFANS 57
MR+ GV D+ T + ++ V D A+ + G + F G+ALI ++
Sbjct: 232 MREAGVVTDEITLVGAISACAQLGVSGYADWIREIAESSRFGSGSNVFVGSALIDMYSKC 291
Query: 58 GFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVL 117
G + A VF ++ +++++I G+ + A+K F +M G + +T V +
Sbjct: 292 GNVEEAYNVFKGMKEMNVFSYSSMIVGFAVHGRARSAIKLFYEMLENGIKPNHVTFVGLF 351
Query: 118 RAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYR 177
A + AG G+ + G + V ++ + D+ + GH + A ++ MP
Sbjct: 352 TACSHAGMVEQGQQLFGAMKECYGVSPTADHYACMADLLGRAGHLEKALQLVQTMPMEPN 411
Query: 178 DVVCWSVLVAGYVQCNK--FQDAIRVFWNMLSDNV 210
V ++L A ++ N + A R + + DN+
Sbjct: 412 GGVWGALLGASHIHGNPDVAEIASRSLFELEPDNL 446
>Medtr4g011570.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:2848688-2851472 | 20130731
Length = 873
Score = 134 bits (337), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 87/257 (33%), Positives = 136/257 (52%), Gaps = 7/257 (2%)
Query: 5 GVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSA 63
GV PD +TFP +L+ P + I+ + + GF+ D NALI+ +A G I +A
Sbjct: 195 GVRPDVYTFPCVLRTCGGVPDLVKGREIHVHVLRFGFESDVDVINALITMYAKCGDIDTA 254
Query: 64 CQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMA 123
VFD+ KD I+W A+I G +N E L F +M D +T+ SV+ A +
Sbjct: 255 RLVFDKMPKKDRISWNAMIAGCFENGECLEGLTLFCRMIEYPVDPDLMTMTSVITACELI 314
Query: 124 GDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWS 183
GD+ G+ +HG YV + D V+++L+ MY G ++A KVF + RDVV W+
Sbjct: 315 GDERLGREIHG-YVMRTKFSRDPSVYNSLIQMYSSVGLVEEAEKVFSQT--ECRDVVMWT 371
Query: 184 VLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECK 243
+++GY Q A+ + M ++ ++P+E T+ VLSAC+ LD G +H+ + K
Sbjct: 372 AMISGYENNLMHQKALETYKMMEAEGIIPDEITIGVVLSACSCLCDLDTGMNLHE--KAK 429
Query: 244 KVSLN-SVELGTALVDM 259
K L V + L+DM
Sbjct: 430 KTGLIFYVIVANKLIDM 446
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/234 (34%), Positives = 121/234 (51%), Gaps = 6/234 (2%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPFM-IYAQIFKLGFDLDRFAGNALISAFANSGF 59
M +G+ PD+ T ++L S D M ++ + K G N LI +A
Sbjct: 393 MEAEGIIPDEITIGVVLSACSCLCDLDTGMNLHEKAKKTGLIFYVIVANKLIDMYAKCKC 452
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
I A +VF K+II+WT++I G N+ +AL F +M + +T+V VL A
Sbjct: 453 IDKALEVFHSIRDKNIISWTSIILGLRINNRCYDALFFFKEMMRRQKP-NWVTLVCVLSA 511
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
A G GK +H + ++ G V DGY+ +A++DMY +CG + A K F + +DV
Sbjct: 512 CARIGAFTCGKEIHAYALRTG-VSDDGYMPNAVLDMYVRCGRMEYAWKQFFSID---QDV 567
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
W++L+ GY + K A +F ML NVVPNE T S+L AC+ SG + +G
Sbjct: 568 STWNILLTGYAERGKGTLATELFRRMLESNVVPNEVTFISILCACSRSGMVAEG 621
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 111/213 (52%), Gaps = 12/213 (5%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
I+ + + F D N+LI +++ G + A +VF ++ +D++ WTA+I+GY N +
Sbjct: 323 IHGYVMRTKFSRDPSVYNSLIQMYSSVGLVEEAEKVFSQTECRDVVMWTAMISGYENNLM 382
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
+AL+ + M + G D +T+ VL A + D + G +H +A + L YV
Sbjct: 383 HQKALETYKMMEAEGIIPDEITIGVVLSACSCLCDLDTGMNLHE---KAKKTGLIFYVIV 439
Query: 151 A--LMDMYFKCGHCDDACKVFDEMPYSYRD--VVCWSVLVAGYVQCNKFQDAIRVFWNML 206
A L+DMY KC D A +VF +S RD ++ W+ ++ G N+ DA+ F M+
Sbjct: 440 ANKLIDMYAKCKCIDKALEVF----HSIRDKNIISWTSIILGLRINNRCYDALFFFKEMM 495
Query: 207 SDNVVPNEFTLTSVLSACAHSGALDQGKLVHQY 239
PN TL VLSACA GA GK +H Y
Sbjct: 496 RRQK-PNWVTLVCVLSACARIGAFTCGKEIHAY 527
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 99/200 (49%), Gaps = 3/200 (1%)
Query: 47 GNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGT 106
GN L+S F G + A VF +++ +W L+ GY K EAL + +M G
Sbjct: 137 GNVLLSMFVKFGNLVDAWYVFGRMPERNLFSWNVLVGGYAKGGFFDEALNLYDRMLWVGV 196
Query: 107 GVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDAC 166
D T VLR D G+ +H ++ G + D V +AL+ MY KCG D A
Sbjct: 197 RPDVYTFPCVLRTCGGVPDLVKGREIHVHVLRFG-FESDVDVINALITMYAKCGDIDTAR 255
Query: 167 KVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAH 226
VFD+MP +D + W+ ++AG + + + + +F M+ V P+ T+TSV++AC
Sbjct: 256 LVFDKMP--KKDRISWNAMIAGCFENGECLEGLTLFCRMIEYPVDPDLMTMTSVITACEL 313
Query: 227 SGALDQGKLVHQYIECKKVS 246
G G+ +H Y+ K S
Sbjct: 314 IGDERLGREIHGYVMRTKFS 333
>Medtr4g082470.1 | PPR containing plant-like protein | HC |
chr4:32162319-32165367 | 20130731
Length = 700
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/221 (34%), Positives = 123/221 (55%), Gaps = 7/221 (3%)
Query: 43 DRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMR 102
D F +L+ A++ G + A +VFDE + +++WT++I YV+N+ E L F +MR
Sbjct: 168 DSFVLTSLVDAYSKCGKLRDARKVFDEIPDRSVVSWTSMIVAYVQNECAEEGLMLFNRMR 227
Query: 103 STGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHC 162
+ TV S++ A G + GKWVHG+ ++ G ++++ Y+ ++L++MY KCG
Sbjct: 228 EGFLDGNVFTVGSLVTACTKLGCLHQGKWVHGYVIKNG-IEINSYLATSLLNMYVKCGDI 286
Query: 163 DDACKVFDEMPYSY----RDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLT 218
DA VFDE S D+V W+ ++ GY Q Q A+ +F + ++PN TL
Sbjct: 287 GDARSVFDEFSVSTCGGGDDLVFWTAMIVGYTQRGYPQAALELFTDKKWYRILPNSVTLA 346
Query: 219 SVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
S+LSACA + GKL+H + K L+ L +LVDM
Sbjct: 347 SLLSACAQLENIVMGKLLHVLV--VKYGLDDTSLRNSLVDM 385
Score = 128 bits (322), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 73/217 (33%), Positives = 122/217 (56%), Gaps = 4/217 (1%)
Query: 30 MIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKND 89
+++ + K G D D N+L+ +A G I A VF + KD+++W ++I+GY ++
Sbjct: 363 LLHVLVVKYGLD-DTSLRNSLVDMYAKCGLIPDAHYVFATTVDKDVVSWNSVISGYAQSG 421
Query: 90 LPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVW 149
EAL F +MR DA+TVV VL A A G G +HGF ++ G V YV
Sbjct: 422 SAYEALDLFNRMRMESFLPDAVTVVGVLSACASVGAHQIGLSLHGFALKYGLVSSSIYVG 481
Query: 150 SALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDN 209
+AL++ Y KCG A VFD M ++ V W+ ++ G ++ +F +ML +
Sbjct: 482 TALLNFYAKCGDATSARMVFDGM--GEKNAVTWAAMIGGCGMQGDGVGSLALFRDMLKEE 539
Query: 210 VVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVS 246
+VPNE T++L+AC+HSG +++G ++ ++ CK+++
Sbjct: 540 LVPNEVVFTTLLAACSHSGMVEEGLMIFDFM-CKELN 575
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 109/213 (51%), Gaps = 6/213 (2%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTG 107
LIS +A+ GF+ A +F ++ +I + ND+ S + + R+T
Sbjct: 72 TTLISLYASFGFLRHARTLFHRLPSPTHHSFKLIIRWHFLNDVHSHVVSFYNLARTTLGS 131
Query: 108 VDALTVVSV-LRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDAC 166
+ L V S+ L+ A+ D +H +++ D +V ++L+D Y KCG DA
Sbjct: 132 FNDLVVFSILLKTASQLRDIVLTTKLHCNILKSNAA--DSFVLTSLVDAYSKCGKLRDAR 189
Query: 167 KVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAH 226
KVFDE+P R VV W+ ++ YVQ ++ + +F M + N FT+ S+++AC
Sbjct: 190 KVFDEIP--DRSVVSWTSMIVAYVQNECAEEGLMLFNRMREGFLDGNVFTVGSLVTACTK 247
Query: 227 SGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
G L QGK VH Y+ + +NS L T+L++M
Sbjct: 248 LGCLHQGKWVHGYVIKNGIEINSY-LATSLLNM 279
>Medtr3g011950.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:3128021-3130773 | 20130731
Length = 810
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 139/260 (53%), Gaps = 5/260 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPV-VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M+ VEP + F LL++ + ++ ++ + K GF+ + FA ++++ +A
Sbjct: 126 MQNDEVEPVVYDFTYLLQLCGENFDLKKGMEVHGMLIKNGFESNLFAMTSVVNLYAKCRK 185
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
I A ++F +D++ W ++ GY +N +ALK + M+ G D++T+VSVL A
Sbjct: 186 IDDAYKMFVRMPERDLVCWNTVVAGYAQNGFARKALKLVLDMQEDGKKADSITLVSVLPA 245
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
A G+ VHG+ V+ G + V +AL+DMYFKCG + VF M S ++V
Sbjct: 246 VADVKGLRIGRSVHGYAVRLGFDSMVN-VSTALLDMYFKCGEVETGRLVFQRM--SSKNV 302
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQY 239
V W+ ++ G Q + ++A F M + V P ++ L AC++ G L++GK VH+
Sbjct: 303 VSWNTVIDGLAQNGESEEAFATFLKMFEEKVEPTNVSMMGALHACSNLGDLERGKFVHRL 362
Query: 240 IECKKVSLNSVELGTALVDM 259
++ K+S N V + +L+ M
Sbjct: 363 LDQMKLSSN-VSVMNSLISM 381
Score = 114 bits (285), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 106/187 (56%), Gaps = 4/187 (2%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTG 107
N+LIS ++ + A VFD K + W A+I GY +N +EAL F M+S G
Sbjct: 376 NSLISMYSKCKRVDIAASVFDNLEGKTNVTWNAMILGYAQNGCVNEALNLFCTMQSQGIK 435
Query: 108 VDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACK 167
D+ T VSV+ A A KW+HG ++ + + +V +AL+DMY KCG + A +
Sbjct: 436 PDSFTFVSVITALADLSVTRQAKWIHGLAIRTN-MDTNVFVATALVDMYAKCGAIETARE 494
Query: 168 VFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSD-NVVPNEFTLTSVLSACAH 226
+FD M R V+ W+ ++ GY + A+ +F +M ++ ++ PN+ T SV+SAC+H
Sbjct: 495 LFDMM--QERHVITWNAMIDGYGTHGLGKAALDLFDDMQNEASLKPNDITFLSVISACSH 552
Query: 227 SGALDQG 233
SG +++G
Sbjct: 553 SGFVEEG 559
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 109/229 (47%), Gaps = 4/229 (1%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
++ +LGFD AL+ + G + + VF S K++++W +I+G +N
Sbjct: 258 VHGYAVRLGFDSMVNVSTALLDMYFKCGEVETGRLVFQRMSSKNVVSWNTVIDGLAQNGE 317
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
EA F+KM ++++ L A + GD GK+VH Q ++ + V +
Sbjct: 318 SEEAFATFLKMFEEKVEPTNVSMMGALHACSNLGDLERGKFVHRLLDQM-KLSSNVSVMN 376
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV 210
+L+ MY KC D A VFD + + V W+ ++ GY Q +A+ +F M S +
Sbjct: 377 SLISMYSKCKRVDIAASVFDNL--EGKTNVTWNAMILGYAQNGCVNEALNLFCTMQSQGI 434
Query: 211 VPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
P+ FT SV++A A Q K +H + N V + TALVDM
Sbjct: 435 KPDSFTFVSVITALADLSVTRQAKWIHGLAIRTNMDTN-VFVATALVDM 482
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 123/251 (49%), Gaps = 8/251 (3%)
Query: 10 QHTFPLLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDE 69
+H +LL++ + + + I I K GF LIS F G I A +VFD
Sbjct: 37 RHPSSILLELTTS--ISELHQILPHIIKNGFYNQHLFQTKLISLFCKFGTINEALRVFDS 94
Query: 70 SSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFG 129
K + + L+ GYVKN SE+L F +M++ +L+ D G
Sbjct: 95 VETKLDVLYHTLLKGYVKNSSLSESLSFFKRMQNDEVEPVVYDFTYLLQLCGENFDLKKG 154
Query: 130 KWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGY 189
VHG ++ G + + + ++++++Y KC DDA K+F MP RD+VCW+ +VAGY
Sbjct: 155 MEVHGMLIKNG-FESNLFAMTSVVNLYAKCRKIDDAYKMFVRMP--ERDLVCWNTVVAGY 211
Query: 190 VQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNS 249
Q + A+++ +M D + TL SVL A A L G+ VH Y ++ +S
Sbjct: 212 AQNGFARKALKLVLDMQEDGKKADSITLVSVLPAVADVKGLRIGRSVHGY--AVRLGFDS 269
Query: 250 -VELGTALVDM 259
V + TAL+DM
Sbjct: 270 MVNVSTALLDM 280
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 90/195 (46%), Gaps = 2/195 (1%)
Query: 1 MRQKGVEPDQHTF-PLLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M+ +G++PD TF ++ + V I+ + D + F AL+ +A G
Sbjct: 429 MQSQGIKPDSFTFVSVITALADLSVTRQAKWIHGLAIRTNMDTNVFVATALVDMYAKCGA 488
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGT-GVDALTVVSVLR 118
I +A ++FD + +I W A+I+GY + L AL F M++ + + +T +SV+
Sbjct: 489 IETARELFDMMQERHVITWNAMIDGYGTHGLGKAALDLFDDMQNEASLKPNDITFLSVIS 548
Query: 119 AAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRD 178
A + +G G + + ++ + A++D+ + G DDA K EMP
Sbjct: 549 ACSHSGFVEEGLYYFKIMKEGYGLEPSMDHYGAMVDLLGRAGKLDDAWKFIHEMPIKPGI 608
Query: 179 VVCWSVLVAGYVQCN 193
V ++L A + N
Sbjct: 609 TVLGAMLGACKIHKN 623
>Medtr3g117150.1 | organelle transcript processing protein, putative
| HC | chr3:54810037-54807667 | 20130731
Length = 571
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 79/228 (34%), Positives = 128/228 (56%), Gaps = 4/228 (1%)
Query: 7 EPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQ 65
+PD T+ LK + + + ++ I K+GF D + NALI ++ G + A Q
Sbjct: 93 KPDTFTYSFALKSCGRLKLTQQAKQLHGFINKMGFGFDLYIQNALIHMYSEIGELVIARQ 152
Query: 66 VFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGD 125
VFD S +D+++WT++I G+V + L EA++ F +M G V+ TV+SVLR A +G
Sbjct: 153 VFDRMSHRDVVSWTSMIAGFVNHHLTVEAIQLFQRMLEVGVDVNEATVISVLRGCADSGA 212
Query: 126 DNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVL 185
+ G+ VHG + G + V +AL+ MY KCG + A +VFD++ RDV W+ +
Sbjct: 213 LSVGRKVHGIVKEKG-IDFKANVCTALIHMYSKCGCLESAREVFDDV--LDRDVFVWTAM 269
Query: 186 VAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
+ G ++AI +F M + NV P+E T+ VLSA ++G + +G
Sbjct: 270 IYGLACHGMCKEAIELFLEMETCNVKPDERTIMVVLSAYRNAGLVREG 317
>Medtr5g044260.1 | PPR containing plant-like protein | HC |
chr5:19452918-19451090 | 20130731
Length = 565
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 83/234 (35%), Positives = 130/234 (55%), Gaps = 14/234 (5%)
Query: 8 PDQHTFPLLLK----MFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSA 63
PD+HT+P +LK +FS + + ++A + KLGF+LD + N+LI +A+ G++ +A
Sbjct: 83 PDKHTYPFVLKACAYLFS---LFEGKQVHAHVLKLGFELDTYICNSLIHFYASCGYLETA 139
Query: 64 CQVFDE-SSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAM 122
+VFD +++++W +I+ Y K L F +M D T+ SV+RA
Sbjct: 140 RKVFDRMCEWRNVVSWNVMIDSYAKVGDYDIVLIMFCEMMKVYEP-DCYTMQSVIRACGG 198
Query: 123 AGDDNFGKWVHGFYVQA--GRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVV 180
G + G WVH F ++ V D V + L+DMY KCG + A +VF+ M SYRDV
Sbjct: 199 LGSLSLGMWVHAFVLKKCDKNVVCDVLVNTCLVDMYCKCGSLEIAKQVFEGM--SYRDVS 256
Query: 181 CWSVLVAGYVQCNKFQDAIRVFWNMLS-DNVVPNEFTLTSVLSACAHSGALDQG 233
W+ ++ G+ K + A+ F M+ + +VPN T VLSAC HSG +D+G
Sbjct: 257 SWNSIILGFAVHGKAKAALDYFVRMVKVEKIVPNSITFVGVLSACNHSGMVDEG 310
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 95/201 (47%), Gaps = 9/201 (4%)
Query: 65 QVFDESSVKDIIAWTALINGYVKNDLPSEA----LKCFVKMRSTGTGVDALTVVSVLRAA 120
Q+ + W LI Y K+ L + K + + D T VL+A
Sbjct: 36 QILRTIHTPNSFTWNILIQSYSKSTLHKQKAILLYKAIITEQENELFPDKHTYPFVLKAC 95
Query: 121 AMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVV 180
A GK VH ++ G +LD Y+ ++L+ Y CG+ + A KVFD M +R+VV
Sbjct: 96 AYLFSLFEGKQVHAHVLKLG-FELDTYICNSLIHFYASCGYLETARKVFDRMC-EWRNVV 153
Query: 181 CWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYI 240
W+V++ Y + + + +F M+ P+ +T+ SV+ AC G+L G VH ++
Sbjct: 154 SWNVMIDSYAKVGDYDIVLIMFCEMMKV-YEPDCYTMQSVIRACGGLGSLSLGMWVHAFV 212
Query: 241 --ECKKVSLNSVELGTALVDM 259
+C K + V + T LVDM
Sbjct: 213 LKKCDKNVVCDVLVNTCLVDM 233
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 68/150 (45%), Gaps = 1/150 (0%)
Query: 43 DRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMR 102
D L+ + G + A QVF+ S +D+ +W ++I G+ + AL FV+M
Sbjct: 223 DVLVNTCLVDMYCKCGSLEIAKQVFEGMSYRDVSSWNSIILGFAVHGKAKAALDYFVRMV 282
Query: 103 STGTGV-DALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGH 161
V +++T V VL A +G + G + V+ + L+D+Y + GH
Sbjct: 283 KVEKIVPNSITFVGVLSACNHSGMVDEGLMYFEMMTKEYNVEPSLVHYGCLVDLYARAGH 342
Query: 162 CDDACKVFDEMPYSYRDVVCWSVLVAGYVQ 191
+A V EMP V+ S+L A Y Q
Sbjct: 343 IQEALNVVSEMPIKPDAVIWRSLLDACYKQ 372
>Medtr4g032895.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:11375774-11372564 | 20130731
Length = 938
Score = 131 bits (330), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 79/239 (33%), Positives = 128/239 (53%), Gaps = 5/239 (2%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDL-DRFAGNALISAFANSG 58
M+ G++P + TF L+ + P V I+ I K G F G +L+ + +S
Sbjct: 535 MQILGLKPSEITFASLIDCCKESPKVILGMQIHCAILKNGLLCGSEFLGTSLLGMYMDSQ 594
Query: 59 FIGSACQVFDE-SSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVL 117
+ +F E S++K I+ WTALI+G+ +ND +AL + +MR D T V+VL
Sbjct: 595 KLAEGNILFSELSNLKSIVLWTALISGHTQNDCSDQALNLYREMRDNNILPDQATFVTVL 654
Query: 118 RAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYR 177
RA A+ G+ +H G LD SAL+DMY KCG A KVF+E+P +
Sbjct: 655 RACALLSSLQDGQEIHSLIFHTG-FDLDELTSSALVDMYAKCGDVKSAAKVFEELPIK-K 712
Query: 178 DVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLV 236
DV+ W+ ++ G+ + + A++VF M +V P++ T VL+AC+H+G + +G+ +
Sbjct: 713 DVISWNSMIVGFAKNGYAERALKVFDEMTLSSVSPDDVTFLGVLTACSHAGLVSEGRQI 771
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 86/253 (33%), Positives = 135/253 (53%), Gaps = 7/253 (2%)
Query: 9 DQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVF 67
D TF L+ + + + +D ++ ++ + GF LD +++A N G + AC++F
Sbjct: 140 DTATFTALIGGYVRVGMFDDALQLFDEM-QSGFVLDELVIVTVLNACVNLGKLDHACELF 198
Query: 68 DE-SSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDD 126
DE +++AW +I+G+ K EA++ + KMR G T+ SVL A A GD
Sbjct: 199 DEMDGCGNVVAWNVMISGHGKRGYHKEAVEFYRKMRMNGVISSRSTLASVLSAVAGLGDL 258
Query: 127 NFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLV 186
G VHG V+ G + YV S+L++MY KC DA KVFD + R+VV W+ ++
Sbjct: 259 GCGLLVHGEAVKLG-FESSVYVASSLINMYGKCEMLCDAKKVFDVV--CDRNVVMWNTIL 315
Query: 187 AGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVS 246
Y Q D + +F M+ P+EFT +S+LS+CA LD G+ +H I KK
Sbjct: 316 GVYAQNGCLSDVMELFSEMMGCGNDPDEFTYSSILSSCACFDFLDIGRQLHSTI-IKKRF 374
Query: 247 LNSVELGTALVDM 259
+++ + ALVDM
Sbjct: 375 TDNLCVNNALVDM 387
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 129/261 (49%), Gaps = 7/261 (2%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPFM-IYAQIFKLGFDLDRFAGNALISAFANSGF 59
MR GV + T +L + + ++ + KLGF+ + ++LI+ +
Sbjct: 233 MRMNGVISSRSTLASVLSAVAGLGDLGCGLLVHGEAVKLGFESSVYVASSLINMYGKCEM 292
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ A +VFD ++++ W ++ Y +N S+ ++ F +M G D T S+L +
Sbjct: 293 LCDAKKVFDVVCDRNVVMWNTILGVYAQNGCLSDVMELFSEMMGCGNDPDEFTYSSILSS 352
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
A + G+ +H ++ R + V +AL+DMY K G +A K F+ M YRD
Sbjct: 353 CACFDFLDIGRQLHSTIIKK-RFTDNLCVNNALVDMYAKAGALKEARKQFERMK--YRDN 409
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQY 239
+ W+ ++ GYVQ + +A +F M VVP+E + S+LSAC + L+ G H
Sbjct: 410 ISWNAILVGYVQEEEETEAFNMFRRMNRHGVVPDEVCMASILSACGNIKVLEAGLQFHGL 469
Query: 240 IECKKVSLNS-VELGTALVDM 259
K+ L++ + G++L+DM
Sbjct: 470 --SVKLGLDTNLFAGSSLIDM 488
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 124/256 (48%), Gaps = 5/256 (1%)
Query: 5 GVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSA 63
G +PD+ T+ +L + ++ +++ I K F + NAL+ +A +G + A
Sbjct: 338 GNDPDEFTYSSILSSCACFDFLDIGRQLHSTIIKKRFTDNLCVNNALVDMYAKAGALKEA 397
Query: 64 CQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMA 123
+ F+ +D I+W A++ GYV+ + +EA F +M G D + + S+L A
Sbjct: 398 RKQFERMKYRDNISWNAILVGYVQEEEETEAFNMFRRMNRHGVVPDEVCMASILSACGNI 457
Query: 124 GDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWS 183
G HG V+ G + + + S+L+DMY KCG +DA K++ MP VV +
Sbjct: 458 KVLEAGLQFHGLSVKLG-LDTNLFAGSSLIDMYSKCGGIEDARKIYSCMP--EWSVVSMN 514
Query: 184 VLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECK 243
L+AGY ++AI + M + P+E T S++ C S + G +H I
Sbjct: 515 ALIAGYA-IKDTKEAINLLHEMQILGLKPSEITFASLIDCCKESPKVILGMQIHCAILKN 573
Query: 244 KVSLNSVELGTALVDM 259
+ S LGT+L+ M
Sbjct: 574 GLLCGSEFLGTSLLGM 589
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 123/260 (47%), Gaps = 4/260 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M + GV PD+ +L V+E + KLG D + FAG++LI ++ G
Sbjct: 435 MNRHGVVPDEVCMASILSACGNIKVLEAGLQFHGLSVKLGLDTNLFAGSSLIDMYSKCGG 494
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
I A +++ +++ ALI GY D EA+ +M+ G +T S++
Sbjct: 495 IEDARKIYSCMPEWSVVSMNALIAGYAIKD-TKEAINLLHEMQILGLKPSEITFASLIDC 553
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
+ G +H ++ G + ++ ++L+ MY + +F E+ + + +
Sbjct: 554 CKESPKVILGMQIHCAILKNGLLCGSEFLGTSLLGMYMDSQKLAEGNILFSELS-NLKSI 612
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQY 239
V W+ L++G+ Q + A+ ++ M +N++P++ T +VL ACA +L G+ +H
Sbjct: 613 VLWTALISGHTQNDCSDQALNLYREMRDNNILPDQATFVTVLRACALLSSLQDGQEIHSL 672
Query: 240 IECKKVSLNSVELGTALVDM 259
I L+ + +ALVDM
Sbjct: 673 IFHTGFDLDELT-SSALVDM 691
>Medtr1g012380.1 | PPR containing plant-like protein | HC |
chr1:2444546-2447496 | 20130731
Length = 600
Score = 131 bits (329), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 86/262 (32%), Positives = 138/262 (52%), Gaps = 6/262 (2%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M + GV P++ TFP +LK + + ++ + K GF+ D N LI + G
Sbjct: 116 MLRYGVTPNKFTFPFVLKGCAGIGSLRLGKCVHGCVVKFGFEEDVHVLNTLIHMYCCLGE 175
Query: 60 IGS--ACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVL 117
G A +VFD+S D + W+A+I G+V+ S A+ F +M+ G D +T+VSVL
Sbjct: 176 DGFEFAEKVFDDSPKMDTVTWSAMIAGFVRLGCSSRAVDLFREMQVMGVCPDEITMVSVL 235
Query: 118 RAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYR 177
A A G GKWV YV+ + + +AL+DM+ KCG+ D A K+F +M R
Sbjct: 236 SACADLGALELGKWVES-YVEKKNIPKSVELCNALIDMFAKCGNVDKAIKLFRQM--DSR 292
Query: 178 DVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVH 237
+V W+ ++AG + DA+ +F M+ + + P++ VLSAC+HSG +D+G+
Sbjct: 293 TIVSWTSVIAGLAMHGRGLDAVSLFDEMVENGITPDDVAFIGVLSACSHSGLVDKGRYYF 352
Query: 238 QYIECKKVSLNSVELGTALVDM 259
+E + VE +VD+
Sbjct: 353 GSMERNFSIVPKVEHYGCMVDL 374
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/240 (33%), Positives = 110/240 (45%), Gaps = 15/240 (6%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQ-VFDESSVK-------DIIAWTALI 82
I+A I K G + S +N I A +F S D + LI
Sbjct: 37 IHAFILKTGLQNNPLILTKFTSTSSNLNSIHYATSFLFPPSHTTSTPTPSYDAFLFNTLI 96
Query: 83 NGYVKN-DLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGR 141
Y + D S + + M G + T VL+ A G GK VHG V+ G
Sbjct: 97 RAYSQTRDSKSNSFLFYRTMLRYGVTPNKFTFPFVLKGCAGIGSLRLGKCVHGCVVKFG- 155
Query: 142 VQLDGYVWSALMDMYFKCGH--CDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAI 199
+ D +V + L+ MY G + A KVFD+ P D V WS ++AG+V+ A+
Sbjct: 156 FEEDVHVLNTLIHMYCCLGEDGFEFAEKVFDDSPK--MDTVTWSAMIAGFVRLGCSSRAV 213
Query: 200 RVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
+F M V P+E T+ SVLSACA GAL+ GK V Y+E K + SVEL AL+DM
Sbjct: 214 DLFREMQVMGVCPDEITMVSVLSACADLGALELGKWVESYVEKKNIP-KSVELCNALIDM 272
>Medtr2g048855.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:21642144-21644166 | 20130731
Length = 625
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/211 (34%), Positives = 125/211 (59%), Gaps = 6/211 (2%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAF--ANSG-FIGSACQVFDESSVKDIIAWTALINGYVK 87
++A + K G DRF GN+L++ + N G + A +FD VKD+I+WT+LI+GY +
Sbjct: 72 VHAHVLKSGLHSDRFVGNSLLTLYFKLNPGPHLSHARHLFDSLHVKDVISWTSLISGYTR 131
Query: 88 NDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGY 147
+DLP +++ F +M + +A T+ SV++A + D N G+ H + G +
Sbjct: 132 SDLPHQSISLFYEMLAFPVQPNAFTLSSVIKACSALNDVNLGRCFHSMVLTRG-FDWNTV 190
Query: 148 VWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNM-L 206
V +L+DMY DDA +VFDE+ + DV CW+ +++ + + + F+++++ F+ M
Sbjct: 191 VSCSLIDMYGWNRAVDDARRVFDEL-FVKDDVFCWTSIISCFTRNDMFKESLKFFYVMNR 249
Query: 207 SDNVVPNEFTLTSVLSACAHSGALDQGKLVH 237
VVP+ +T ++L+ACA+ G L QGK VH
Sbjct: 250 VRGVVPDGYTFGTILTACANLGLLRQGKEVH 280
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 126/237 (53%), Gaps = 9/237 (3%)
Query: 2 RQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFI 60
R +GV PD +TF +L + ++ ++ ++ LGF + ++L+ + G +
Sbjct: 249 RVRGVVPDGYTFGTILTACANLGLLRQGKEVHGKVVGLGFGGNVVVESSLLDMYGKCGCV 308
Query: 61 GSACQVFDE-SSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ VF+ S K+ ++WTA++ Y +N L V+ R ++ VLRA
Sbjct: 309 RHSRIVFERLSDEKNNVSWTAMLGVYCQNKEYQNVLD-LVRERGD---LNFYAFGIVLRA 364
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
+ N GK VH YV+ G + D + SAL+D+Y KCG D AC +F M R++
Sbjct: 365 CSGLAAVNHGKEVHCMYVRKGGSK-DVIIESALVDLYAKCGMVDFACTMFASM--EVRNL 421
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLV 236
+ W+ +V+G+ Q + +A+ +F +M+ + + P+ T +VL AC+H+G +D+G+ V
Sbjct: 422 ITWNSMVSGFAQNGRGVEALALFEDMIKEGIKPDSITFVAVLFACSHAGLVDEGRKV 478
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 117/231 (50%), Gaps = 11/231 (4%)
Query: 32 YAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKD-IIAWTALINGYVKNDL 90
++ + GFD + +LI + + + A +VFDE VKD + WT++I+ + +ND+
Sbjct: 177 HSMVLTRGFDWNTVVSCSLIDMYGWNRAVDDARRVFDELFVKDDVFCWTSIISCFTRNDM 236
Query: 91 PSEALKCFVKM-RSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVW 149
E+LK F M R G D T ++L A A G GK VHG V G + V
Sbjct: 237 FKESLKFFYVMNRVRGVVPDGYTFGTILTACANLGLLRQGKEVHGKVVGLG-FGGNVVVE 295
Query: 150 SALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDN 209
S+L+DMY KCG C ++ E ++ V W+ ++ Y Q ++Q+ + +++ +
Sbjct: 296 SSLLDMYGKCG-CVRHSRIVFERLSDEKNNVSWTAMLGVYCQNKEYQNVL----DLVRER 350
Query: 210 VVPNEFTLTSVLSACAHSGALDQGKLVH-QYIECKKVSLNSVELGTALVDM 259
N + VL AC+ A++ GK VH Y+ +K V + +ALVD+
Sbjct: 351 GDLNFYAFGIVLRACSGLAAVNHGKEVHCMYV--RKGGSKDVIIESALVDL 399
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 81/148 (54%), Gaps = 7/148 (4%)
Query: 115 SVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCG---HCDDACKVFDE 171
S+L+ + + G VH +++G + D +V ++L+ +YFK H A +FD
Sbjct: 55 SLLQTSVKTNSFHHGASVHAHVLKSG-LHSDRFVGNSLLTLYFKLNPGPHLSHARHLFDS 113
Query: 172 MPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALD 231
+ +DV+ W+ L++GY + + +I +F+ ML+ V PN FTL+SV+ AC+ ++
Sbjct: 114 L--HVKDVISWTSLISGYTRSDLPHQSISLFYEMLAFPVQPNAFTLSSVIKACSALNDVN 171
Query: 232 QGKLVHQYIECKKVSLNSVELGTALVDM 259
G+ H + + N+V + +L+DM
Sbjct: 172 LGRCFHSMVLTRGFDWNTV-VSCSLIDM 198
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 108/222 (48%), Gaps = 7/222 (3%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
+R++G + + + F ++L+ S V ++ + G D +AL+ +A G
Sbjct: 347 VRERG-DLNFYAFGIVLRACSGLAAVNHGKEVHCMYVRKGGSKDVIIESALVDLYAKCGM 405
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ AC +F V+++I W ++++G+ +N EAL F M G D++T V+VL A
Sbjct: 406 VDFACTMFASMEVRNLITWNSMVSGFAQNGRGVEALALFEDMIKEGIKPDSITFVAVLFA 465
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
+ AG + G+ V + G + + ++ ++D+ + G D+A + + Y D
Sbjct: 466 CSHAGLVDEGRKVFTLMGEYGIKPVVEH-YNCMIDLLGRAGFIDEAECLLENADCRY-DK 523
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVL 221
W+ L+ +C+ ++ A RV M+ + +F L+ VL
Sbjct: 524 SLWAALLGACTKCSDYRTAERVARKMIE---LEPDFHLSYVL 562
>Medtr1g007610.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:453448-455881 | 20130731
Length = 668
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/236 (34%), Positives = 131/236 (55%), Gaps = 7/236 (2%)
Query: 1 MRQKGVEPDQHTFPLLLKM--FSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSG 58
M + G+ P++ L+K F V D I+ +K GF + F G++L+ +A G
Sbjct: 186 MVRDGLRPNEFALSSLVKCCGFLGSCV-DGKQIHGCCWKYGFQENVFVGSSLVDMYARCG 244
Query: 59 FIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLR 118
+ + VFDE K+ ++W ALI+G+ + EAL FVKM+ G G T ++L
Sbjct: 245 ELRESRLVFDELESKNEVSWNALISGFARKGEGEEALGLFVKMQREGFGATEFTYSALLC 304
Query: 119 AAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRD 178
+++ G GKW+H +++G+ +L GYV + L+ MY K G+ DA KVFD + D
Sbjct: 305 SSSTTGSLEQGKWLHAHMMKSGK-KLVGYVGNTLLHMYAKSGNICDAKKVFDRLVKV--D 361
Query: 179 VVCWSVLVAGYVQCNKFQDAIRVFWN-MLSDNVVPNEFTLTSVLSACAHSGALDQG 233
VV + ++ GY Q ++A+ +F ML + PN+ T SVL+AC+H+G LD+G
Sbjct: 362 VVSCNSMLIGYAQHGLGKEAVELFEEMMLWVEIEPNDITFLSVLTACSHAGLLDEG 417
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 131/241 (54%), Gaps = 11/241 (4%)
Query: 6 VEPDQHTFPLLLK---MFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGS 62
+EPD+ + LLK M K ++ +++ + F D N+++ +A G +
Sbjct: 87 LEPDRTIYNKLLKRCTMLGK--LKQGKLVHTHLMNSKFRNDLVIKNSILFMYAKCGSLEI 144
Query: 63 ACQVFDESSVKDIIAWTALINGYVKNDLPSE---ALKCFVKMRSTGTGVDALTVVSVLRA 119
A QVFDE VKD++ WT++I GY ++ S AL F++M G + + S+++
Sbjct: 145 ARQVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRPNEFALSSLVKC 204
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
G GK +HG + G Q + +V S+L+DMY +CG ++ VFDE+ ++
Sbjct: 205 CGFLGSCVDGKQIHGCCWKYG-FQENVFVGSSLVDMYARCGELRESRLVFDEL--ESKNE 261
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQY 239
V W+ L++G+ + + ++A+ +F M + EFT +++L + + +G+L+QGK +H +
Sbjct: 262 VSWNALISGFARKGEGEEALGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQGKWLHAH 321
Query: 240 I 240
+
Sbjct: 322 M 322
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 104/228 (45%), Gaps = 5/228 (2%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKP-VVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M+++G + T+ LL S +E ++A + K G L + GN L+ +A SG
Sbjct: 287 MQREGFGATEFTYSALLCSSSTTGSLEQGKWLHAHMMKSGKKLVGYVGNTLLHMYAKSGN 346
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRS-TGTGVDALTVVSVLR 118
I A +VFD D+++ +++ GY ++ L EA++ F +M + +T +SVL
Sbjct: 347 ICDAKKVFDRLVKVDVVSCNSMLIGYAQHGLGKEAVELFEEMMLWVEIEPNDITFLSVLT 406
Query: 119 AAAMAGDDNFGKWVHGFYVQAG-RVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYR 177
A + AG + G + + G +L Y + ++D++ + G D A +EMP
Sbjct: 407 ACSHAGLLDEGLYYFELMKKYGLEPKLSHY--TTVVDLFGRAGLLDQAKSFIEEMPIEPN 464
Query: 178 DVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACA 225
+ ++L A + N A + D P TL S + A A
Sbjct: 465 ATIWGALLGASKMHKNTEMGAYAAQKVLELDPFYPGAHTLLSNIYASA 512
>Medtr7g105440.1 | PPR containing plant-like protein | HC |
chr7:42760641-42762768 | 20130731
Length = 589
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 115/187 (61%), Gaps = 4/187 (2%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTG 107
+I +A +G + S+ +F++++ KD++AW+ALI+GYV+N +EALK F++M S
Sbjct: 247 TTMIDGYAKAGDMESSRFLFEQAAEKDVVAWSALISGYVQNGEANEALKVFLEMESMKVI 306
Query: 108 VDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQL-DGYVWSALMDMYFKCGHCDDAC 166
D +VS++ AA+ GD + V YV + L YV SAL+DM KCG+ + A
Sbjct: 307 PDEFVLVSLMSAASQLGDLKLAQRVDS-YVDNSSIDLQQDYVISALVDMNAKCGNMERAL 365
Query: 167 KVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAH 226
K+F EMP RD+V + ++ G+ +DA+ +F ML + +VP+E T VL+AC+H
Sbjct: 366 KLFREMP--KRDLVSYCSMIHGFSIHGHGEDAVNLFNRMLMEGIVPDEAAFTIVLTACSH 423
Query: 227 SGALDQG 233
SG +D+G
Sbjct: 424 SGLVDKG 430
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 137/262 (52%), Gaps = 16/262 (6%)
Query: 1 MRQKGVEPDQHTFPLLLKMFS---KPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANS 57
M+ +G PD +T+P ++K S K +V ++ +F+ G D D F G L+ +
Sbjct: 106 MKAEGAVPDSYTYPSVIKACSGTCKVLVGKS--VHGSVFRCGLDQDLFVGTTLVDMYGKC 163
Query: 58 GFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVL 117
G IG A +VFDE S +++++WTA++ GYV EA K F +M + +++
Sbjct: 164 GEIGDARKVFDELSDRNVVSWTAMVVGYVTAGDVVEAKKVFDEMPLRNVA----SWNAMI 219
Query: 118 RAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYR 177
R GD + + V + V ++ ++D Y K G + + +F++ + +
Sbjct: 220 RGFVKVGDLSSARGVFDSMPEKNVVS-----FTTMIDGYAKAGDMESSRFLFEQA--AEK 272
Query: 178 DVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVH 237
DVV WS L++GYVQ + +A++VF M S V+P+EF L S++SA + G L + V
Sbjct: 273 DVVAWSALISGYVQNGEANEALKVFLEMESMKVIPDEFVLVSLMSAASQLGDLKLAQRVD 332
Query: 238 QYIECKKVSLNSVELGTALVDM 259
Y++ + L + +ALVDM
Sbjct: 333 SYVDNSSIDLQQDYVISALVDM 354
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 94/183 (51%), Gaps = 7/183 (3%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGS---ACQVFDESSVKDIIAWTALINGYVK 87
++A I + G + D+F + IS AN+ I + + VF+ W I + +
Sbjct: 34 VHASIIQRGLEQDQFLISNFIS-LANTLSISTLSYSTAVFNRVLNPSTFLWNTFIRTHCQ 92
Query: 88 NDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGY 147
+ S+ + F++M++ G D+ T SV++A + GK VHG + G Q D +
Sbjct: 93 SSFFSDTISAFIRMKAEGAVPDSYTYPSVIKACSGTCKVLVGKSVHGSVFRCGLDQ-DLF 151
Query: 148 VWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLS 207
V + L+DMY KCG DA KVFDE+ S R+VV W+ +V GYV +A +VF M
Sbjct: 152 VGTTLVDMYGKCGEIGDARKVFDEL--SDRNVVSWTAMVVGYVTAGDVVEAKKVFDEMPL 209
Query: 208 DNV 210
NV
Sbjct: 210 RNV 212
>Medtr3g052720.1 | organelle transcript processing protein, putative
| HC | chr3:20868148-20864227 | 20130731
Length = 1150
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 125/247 (50%), Gaps = 33/247 (13%)
Query: 43 DRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMR 102
+ A N++I F G I A +FD KD+++W+A+I+ Y +N + EAL FV M
Sbjct: 241 NTIASNSMIVLFGKEGCIAKARSLFDRIEGKDMVSWSAMISCYEQNGMCEEALVLFVDMN 300
Query: 103 STGTGVDALTVVSVLRAAAMAGDDNFGKWVHGF--------YVQ---------------- 138
+ G VD + VVS + A G+ VHG YV
Sbjct: 301 ANGVMVDEVVVVSAISACTSLSAVRMGRSVHGLAAKIGIQDYVSLQNALIHLYSNCGEIL 360
Query: 139 ------AGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQC 192
+G V LD W++++ Y CG+ +DA K+FD M +DVV WS +++GY Q
Sbjct: 361 DAQKIFSGGVLLDLVSWNSMISGYLMCGYVEDAKKLFDSM--VEKDVVSWSAMISGYAQH 418
Query: 193 NKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVEL 252
F +A+ +F M + P+E + SV+SAC H ALD GK +H YI + ++N + L
Sbjct: 419 GCFSEAVALFQEMQLLGIRPDETAIVSVISACTHMAALDLGKWIHAYISKNEFNVNVI-L 477
Query: 253 GTALVDM 259
GT LVDM
Sbjct: 478 GTTLVDM 484
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 109/201 (54%), Gaps = 3/201 (1%)
Query: 34 QIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSE 93
+IF G LD + N++IS + G++ A ++FD KD+++W+A+I+GY ++ SE
Sbjct: 364 KIFSGGVLLDLVSWNSMISGYLMCGYVEDAKKLFDSMVEKDVVSWSAMISGYAQHGCFSE 423
Query: 94 ALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALM 153
A+ F +M+ G D +VSV+ A + GKW+H Y+ ++ + + L+
Sbjct: 424 AVALFQEMQLLGIRPDETAIVSVISACTHMAALDLGKWIHA-YISKNEFNVNVILGTTLV 482
Query: 154 DMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPN 213
DMY KCG ++A +VF M + V W+ L+ G + ++ VF +M +PN
Sbjct: 483 DMYMKCGCVENALEVFYAM--EEKGVSTWNALILGLAMNGLVEKSLNVFADMKKTKTLPN 540
Query: 214 EFTLTSVLSACAHSGALDQGK 234
E T VL AC H G +D+G+
Sbjct: 541 EITFMGVLGACRHMGLVDEGR 561
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 87/198 (43%), Gaps = 5/198 (2%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVED-PFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M+ G+ PD+ ++ + D I+A I K F+++ G L+ + G
Sbjct: 431 MQLLGIRPDETAIVSVISACTHMAALDLGKWIHAYISKNEFNVNVILGTTLVDMYMKCGC 490
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ +A +VF K + W ALI G N L ++L F M+ T T + +T + VL A
Sbjct: 491 VENALEVFYAMEEKGVSTWNALILGLAMNGLVEKSLNVFADMKKTKTLPNEITFMGVLGA 550
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
G + G+ Q +++ + + ++D+ + G +A ++ + MP + DV
Sbjct: 551 CRHMGLVDEGRRYFSSMTQEHKIEPNVKHYGCMVDLLGRAGLLKEAEELIESMPMA-PDV 609
Query: 180 VCWSVLVAGYVQCNKFQD 197
W L+ C K +
Sbjct: 610 ATWGALLGA---CRKHHN 624
>Medtr2g013500.1 | PPR containing plant-like protein | HC |
chr2:3639056-3640975 | 20130731
Length = 515
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 84/233 (36%), Positives = 134/233 (57%), Gaps = 12/233 (5%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
I+A++ K G D F N L+ + +S + SA +VF D+++WT+LI+G K
Sbjct: 80 IHARLIKSGHIFDGFIKNTLLYFYLSSNDVVSATRVFKSIPSPDVVSWTSLISGLSKCGF 139
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYV-- 148
+EA++ F S +ALT+VS + A + G FGK +H + +++ + +DG +
Sbjct: 140 ETEAIEAF---SSINVKPNALTLVSAISACSSIGAIKFGKAIHAYGLKS--LMIDGNIVF 194
Query: 149 WSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNML-S 207
++A +D+Y KCG +A VF +M S RDV+ W+ L+ Y + + +A+ VF M+ S
Sbjct: 195 YNAALDLYAKCGFFSNARNVFVKM--SKRDVISWTTLLMAYARGGQCGEAVEVFKQMIVS 252
Query: 208 DNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLN-SVELGTALVDM 259
PNE T+ +VLSACA G+L G VH YIE K++ L+ +G ALV+M
Sbjct: 253 GEAEPNESTVVTVLSACASIGSLSLGCWVHDYIE-KRIDLDVDGNIGNALVNM 304
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 105/189 (55%), Gaps = 3/189 (1%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTG 107
NA + +A GF +A VF + S +D+I+WT L+ Y + EA++ F +M +G
Sbjct: 196 NAALDLYAKCGFFSNARNVFVKMSKRDVISWTTLLMAYARGGQCGEAVEVFKQMIVSGEA 255
Query: 108 -VDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDAC 166
+ TVV+VL A A G + G WVH + + + +DG + +AL++MY KCG
Sbjct: 256 EPNESTVVTVLSACASIGSLSLGCWVHDYIEKRIDLDVDGNIGNALVNMYVKCGDMKMGL 315
Query: 167 KVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAH 226
KVF+ + ++DV+ W ++ G + +++F +ML V+P++ T +LSAC+H
Sbjct: 316 KVFNMVV--HKDVISWGTVICGLAMNGYGKQVVQMFSHMLVHGVLPDDVTFIGLLSACSH 373
Query: 227 SGALDQGKL 235
G + +G +
Sbjct: 374 VGLVSEGMM 382
>Medtr3g080230.1 | PPR containing plant-like protein | HC |
chr3:36292375-36290915 | 20130731
Length = 486
Score = 128 bits (321), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 145/301 (48%), Gaps = 53/301 (17%)
Query: 1 MRQKGVEPDQHTFPLLLKM--FSKPVVEDPFMIYAQIFKLGF------------------ 40
MR+ + PD+ +F LLK F+ P+V D I+ +FK GF
Sbjct: 98 MRRNSIAPDEFSFTFLLKSRSFTMPLVHD---IHGAVFKFGFCRHLHVQNALIHLYAVGG 154
Query: 41 -----------------DLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALIN 83
D+D + + L+ A A +G + A +VFD +D+++WT +++
Sbjct: 155 VTISARKVFEDAVRVGLDVDIVSWSGLLVAHAKAGELDVARKVFDGMPERDVVSWTIMLS 214
Query: 84 GYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQ 143
Y K P E L F +MR G D +TV+SV+ A A GD G+ VH F V+
Sbjct: 215 AYSKAKRPHETLDLFQEMRLAGVWPDEVTVLSVISACAELGDAEMGRMVHKF------VE 268
Query: 144 LDGYVW-----SALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDA 198
+G+ W ++L+DMY KCG ++A +VFD + ++ W+ ++ +DA
Sbjct: 269 ENGFGWMVALCNSLIDMYGKCGCLEEAWQVFDRT--KRKSLITWNAMMMVCANHGYAEDA 326
Query: 199 IRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVD 258
R+F M+ VVP+ T+ ++L A AH G +D+G + + ++ +E A+VD
Sbjct: 327 FRLFEGMIGSGVVPDGVTILALLVAYAHKGFVDEGIRLFESMQRDYGVEPRIEHYGAVVD 386
Query: 259 M 259
M
Sbjct: 387 M 387
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 84/188 (44%), Gaps = 2/188 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
MR GV PD+ T ++ ++ E M++ + + GF N+LI + G
Sbjct: 232 MRLAGVWPDEVTVLSVISACAELGDAEMGRMVHKFVEENGFGWMVALCNSLIDMYGKCGC 291
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ A QVFD + K +I W A++ + +A + F M +G D +T++++L A
Sbjct: 292 LEEAWQVFDRTKRKSLITWNAMMMVCANHGYAEDAFRLFEGMIGSGVVPDGVTILALLVA 351
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
A G + G + + V+ + A++DM + G +A + MP DV
Sbjct: 352 YAHKGFVDEGIRLFESMQRDYGVEPRIEHYGAVVDMLGRSGRLQEAYNLLTSMPIPSNDV 411
Query: 180 VCWSVLVA 187
+ W L+
Sbjct: 412 I-WGALLG 418
>Medtr3g080230.2 | PPR containing plant-like protein | HC |
chr3:36292375-36290915 | 20130731
Length = 486
Score = 128 bits (321), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 145/301 (48%), Gaps = 53/301 (17%)
Query: 1 MRQKGVEPDQHTFPLLLKM--FSKPVVEDPFMIYAQIFKLGF------------------ 40
MR+ + PD+ +F LLK F+ P+V D I+ +FK GF
Sbjct: 98 MRRNSIAPDEFSFTFLLKSRSFTMPLVHD---IHGAVFKFGFCRHLHVQNALIHLYAVGG 154
Query: 41 -----------------DLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALIN 83
D+D + + L+ A A +G + A +VFD +D+++WT +++
Sbjct: 155 VTISARKVFEDAVRVGLDVDIVSWSGLLVAHAKAGELDVARKVFDGMPERDVVSWTIMLS 214
Query: 84 GYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQ 143
Y K P E L F +MR G D +TV+SV+ A A GD G+ VH F V+
Sbjct: 215 AYSKAKRPHETLDLFQEMRLAGVWPDEVTVLSVISACAELGDAEMGRMVHKF------VE 268
Query: 144 LDGYVW-----SALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDA 198
+G+ W ++L+DMY KCG ++A +VFD + ++ W+ ++ +DA
Sbjct: 269 ENGFGWMVALCNSLIDMYGKCGCLEEAWQVFDRT--KRKSLITWNAMMMVCANHGYAEDA 326
Query: 199 IRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVD 258
R+F M+ VVP+ T+ ++L A AH G +D+G + + ++ +E A+VD
Sbjct: 327 FRLFEGMIGSGVVPDGVTILALLVAYAHKGFVDEGIRLFESMQRDYGVEPRIEHYGAVVD 386
Query: 259 M 259
M
Sbjct: 387 M 387
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 84/188 (44%), Gaps = 2/188 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
MR GV PD+ T ++ ++ E M++ + + GF N+LI + G
Sbjct: 232 MRLAGVWPDEVTVLSVISACAELGDAEMGRMVHKFVEENGFGWMVALCNSLIDMYGKCGC 291
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ A QVFD + K +I W A++ + +A + F M +G D +T++++L A
Sbjct: 292 LEEAWQVFDRTKRKSLITWNAMMMVCANHGYAEDAFRLFEGMIGSGVVPDGVTILALLVA 351
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
A G + G + + V+ + A++DM + G +A + MP DV
Sbjct: 352 YAHKGFVDEGIRLFESMQRDYGVEPRIEHYGAVVDMLGRSGRLQEAYNLLTSMPIPSNDV 411
Query: 180 VCWSVLVA 187
+ W L+
Sbjct: 412 I-WGALLG 418
>Medtr8g098250.1 | PPR containing plant-like protein | HC |
chr8:40970486-40967324 | 20130731
Length = 998
Score = 128 bits (321), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 113/203 (55%), Gaps = 3/203 (1%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
I+ I K G LD FAG+ALI ++ +G A VF+E KDI+ WTA+ +GY +
Sbjct: 466 IHGLIIKYGVSLDEFAGSALIDVYSKCSRVGDARLVFEEIQDKDIVVWTAMFSGYTQQSE 525
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
E+LK + ++ + + T +V+ AA+ G+ H ++ G D +V +
Sbjct: 526 NEESLKLYKCLQMSRLKPNEFTFAAVITAASNIASLRHGQQFHNQVIKMG-FDDDPFVAN 584
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV 210
L+DMY K G ++A K F + +++D CW+ ++A Y Q + + A++VF +M+ + +
Sbjct: 585 TLVDMYAKSGSIEEAHKAF--ISTNWKDTACWNSMIATYAQHGEAEKALQVFEDMIMEGL 642
Query: 211 VPNEFTLTSVLSACAHSGALDQG 233
PN T VLSAC+H+G LD G
Sbjct: 643 KPNYVTFVGVLSACSHTGLLDLG 665
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 116/216 (53%), Gaps = 3/216 (1%)
Query: 25 VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALING 84
+E ++A K+ D D F N LI +A + A +VF+ + D++++ A+I G
Sbjct: 359 LEKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTDARKVFNLMAAIDLVSYNAMIEG 418
Query: 85 YVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQL 144
Y + D EAL F +MR + + L VS+L +A +HG ++ G V L
Sbjct: 419 YSRQDKLCEALDLFREMRLSLSSPTLLIFVSLLGVSASLYHLELSNQIHGLIIKYG-VSL 477
Query: 145 DGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWN 204
D + SAL+D+Y KC DA VF+E+ +D+V W+ + +GY Q ++ +++++++
Sbjct: 478 DEFAGSALIDVYSKCSRVGDARLVFEEI--QDKDIVVWTAMFSGYTQQSENEESLKLYKC 535
Query: 205 MLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYI 240
+ + PNEFT +V++A ++ +L G+ H +
Sbjct: 536 LQMSRLKPNEFTFAAVITAASNIASLRHGQQFHNQV 571
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 120/227 (52%), Gaps = 5/227 (2%)
Query: 16 LLKMFSKPVVEDPFMIYAQIFKLGF-DLDRFAGNALISAFANSGFIGSACQVFDESSVKD 74
L + P + I+++I GF D F N L+ A++ + A ++FD S K+
Sbjct: 45 LANLLQSPHIPCCKKIHSKIVVFGFHKHDIFLVNTLLHAYSKLNLVNHANKLFDTMSHKN 104
Query: 75 IIAWTALINGYVKNDLPSEALKCFVK-MRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVH 133
++ W+++++ Y + EAL FV+ MRS + + SV+RA G N +H
Sbjct: 105 LVTWSSMVSMYTHHSHCLEALMLFVQFMRSCNEKPNEYILASVVRACTQFGGLNPALQIH 164
Query: 134 GFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCN 193
G V+ G VQ D YV ++L+D Y K DDA +FD + + W+ ++AGY +
Sbjct: 165 GLVVKGGYVQ-DVYVCTSLIDFYTKHACIDDARLLFDGL--QVKTSFTWTTIIAGYSKQG 221
Query: 194 KFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYI 240
+ Q ++++F M +V P+++ L+SVLSAC L+ GK +H Y+
Sbjct: 222 RSQVSLKLFDQMKEGHVCPDKYVLSSVLSACLMLKFLEGGKQIHCYV 268
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 130/261 (49%), Gaps = 7/261 (2%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDP-FMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
MR +P+++ +++ ++ +P I+ + K G+ D + +LI +
Sbjct: 132 MRSCNEKPNEYILASVVRACTQFGGLNPALQIHGLVVKGGYVQDVYVCTSLIDFYTKHAC 191
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
I A +FD VK WT +I GY K +LK F +M+ D + SVL A
Sbjct: 192 IDDARLLFDGLQVKTSFTWTTIIAGYSKQGRSQVSLKLFDQMKEGHVCPDKYVLSSVLSA 251
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
M GK +H + +++G V +D + + +D YFKC K+FD M ++V
Sbjct: 252 CLMLKFLEGGKQIHCYVLRSGIV-MDVSMVNGFIDFYFKCHKVQLGRKLFDRM--VDKNV 308
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQY 239
V W+ ++AG +Q + +DA+ +F M P+ F TSVL++C AL++G+ VH Y
Sbjct: 309 VSWTTVIAGCMQNSFHRDALDLFVEMARMGWNPDAFGCTSVLNSCGSLVALEKGRQVHAY 368
Query: 240 IECKKVSLNSVE-LGTALVDM 259
KV++++ + + L+DM
Sbjct: 369 --AIKVNIDNDDFVKNGLIDM 387
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 120/260 (46%), Gaps = 5/260 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKM-FSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M++ V PD++ +L +E I+ + + G +D N I +
Sbjct: 233 MKEGHVCPDKYVLSSVLSACLMLKFLEGGKQIHCYVLRSGIVMDVSMVNGFIDFYFKCHK 292
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ ++FD K++++WT +I G ++N +AL FV+M G DA SVL +
Sbjct: 293 VQLGRKLFDRMVDKNVVSWTTVIAGCMQNSFHRDALDLFVEMARMGWNPDAFGCTSVLNS 352
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
G+ VH + ++ + D +V + L+DMY KC DA KVF+ M + D+
Sbjct: 353 CGSLVALEKGRQVHAYAIKVN-IDNDDFVKNGLIDMYAKCDSLTDARKVFNLM--AAIDL 409
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQY 239
V ++ ++ GY + +K +A+ +F M P S+L A L+ +H
Sbjct: 410 VSYNAMIEGYSRQDKLCEALDLFREMRLSLSSPTLLIFVSLLGVSASLYHLELSNQIHGL 469
Query: 240 IECKKVSLNSVELGTALVDM 259
I VSL+ G+AL+D+
Sbjct: 470 IIKYGVSLDEFA-GSALIDV 488
>Medtr8g074780.1 | PPR containing plant-like protein | HC |
chr8:31617312-31615266 | 20130731
Length = 510
Score = 127 bits (320), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 78/244 (31%), Positives = 135/244 (55%), Gaps = 6/244 (2%)
Query: 1 MRQKGVEPDQHTFPLLLKMF-SKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
MR G P+++T+P +LK ++ +I+ + K G + D F GNA ++ +A
Sbjct: 111 MRLSGAAPNRYTYPFVLKACGAERDCLKGRIIHGNVVKCGLEFDLFVGNAFVAFYAKCKE 170
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKM-RSTGTGV-DALTVVSVL 117
I ++ +VFDE +DI++W ++++GY+ N EA+ F M R G G D T+V+VL
Sbjct: 171 IEASRKVFDEMLERDIVSWNSMMSGYIANGYVDEAVMLFCDMLRDDGIGFPDNATLVTVL 230
Query: 118 RAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYR 177
A A D + G W+H + V+ G ++LD V L+ +Y CG+ A VFD++P R
Sbjct: 231 PAFAEKADIHAGYWIHCYIVKTG-MKLDPAVGCGLITLYSNCGYIRMAKAVFDQIP--DR 287
Query: 178 DVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVH 237
+V+ WS ++ Y Q+A+ +F ++ + + S+LSAC+H+G ++G +
Sbjct: 288 NVIVWSAIIRCYGMHGFAQEALSMFRQLVELGLHLDGIVFLSLLSACSHAGMHEEGWHLF 347
Query: 238 QYIE 241
Q +E
Sbjct: 348 QTME 351
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 109/213 (51%), Gaps = 7/213 (3%)
Query: 32 YAQIFKLGFDLDRFAGNALISAFANSG--FIGSACQVFDESSVKDIIAWTALINGYVKND 89
+AQI G D F LI ++ G + A +VFD+ S +D+ W +I GY
Sbjct: 40 HAQIIIGGHKQDPFIAAKLIDKYSQLGGTNVEHARKVFDDLSERDVFCWNNVIKGYANMG 99
Query: 90 LPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVW 149
+EAL + MR +G + T VL+A D G+ +HG V+ G ++ D +V
Sbjct: 100 PFAEALHVYNAMRLSGAAPNRYTYPFVLKACGAERDCLKGRIIHGNVVKCG-LEFDLFVG 158
Query: 150 SALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDN 209
+A + Y KC + + KVFDEM RD+V W+ +++GY+ +A+ +F +ML D+
Sbjct: 159 NAFVAFYAKCKEIEASRKVFDEM--LERDIVSWNSMMSGYIANGYVDEAVMLFCDMLRDD 216
Query: 210 VV--PNEFTLTSVLSACAHSGALDQGKLVHQYI 240
+ P+ TL +VL A A + G +H YI
Sbjct: 217 GIGFPDNATLVTVLPAFAEKADIHAGYWIHCYI 249
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 94/195 (48%), Gaps = 3/195 (1%)
Query: 1 MRQKGVE-PDQHTFPLLLKMFS-KPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSG 58
+R G+ PD T +L F+ K + + I+ I K G LD G LI+ ++N G
Sbjct: 213 LRDDGIGFPDNATLVTVLPAFAEKADIHAGYWIHCYIVKTGMKLDPAVGCGLITLYSNCG 272
Query: 59 FIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLR 118
+I A VFD+ +++I W+A+I Y + EAL F ++ G +D + +S+L
Sbjct: 273 YIRMAKAVFDQIPDRNVIVWSAIIRCYGMHGFAQEALSMFRQLVELGLHLDGIVFLSLLS 332
Query: 119 AAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRD 178
A + AG G + G V+ + + ++ ++D+ + G+ + A ++ MP
Sbjct: 333 ACSHAGMHEEGWHLFQTMETYGVVKGEAH-YACMVDLLGRAGNLEKAMELIQSMPIQPGK 391
Query: 179 VVCWSVLVAGYVQCN 193
V ++L A + N
Sbjct: 392 NVYGALLGASRIHKN 406
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 56/110 (50%), Gaps = 5/110 (4%)
Query: 130 KWVHGFYVQAGRVQLDGYVWSALMDMYFKCG--HCDDACKVFDEMPYSYRDVVCWSVLVA 187
K H + G Q D ++ + L+D Y + G + + A KVFD++ S RDV CW+ ++
Sbjct: 37 KQTHAQIIIGGHKQ-DPFIAAKLIDKYSQLGGTNVEHARKVFDDL--SERDVFCWNNVIK 93
Query: 188 GYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVH 237
GY F +A+ V+ M PN +T VL AC +G+++H
Sbjct: 94 GYANMGPFAEALHVYNAMRLSGAAPNRYTYPFVLKACGAERDCLKGRIIH 143
>Medtr8g105720.1 | PPR containing plant-like protein | HC |
chr8:44583313-44585824 | 20130731
Length = 701
Score = 127 bits (320), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 91/281 (32%), Positives = 149/281 (53%), Gaps = 31/281 (11%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPFM---IYAQIFKLGFDLDRFAGNALISAFA-- 55
MR V P++H FP LLK + +++ + ++A +LG D D + NALI+ +A
Sbjct: 101 MRSLSVPPNRHVFPSLLK--ASTLLKHHKLAHSLHACTVRLGLDSDLYIANALINTYAKF 158
Query: 56 -NSGFI----------GSAC--QVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMR 102
N+G + G C +VFD V+D+++W +I G+ +N + EAL +M
Sbjct: 159 HNAGKVFDVFPKRGESGIDCVKKVFDMMPVRDVVSWNTVIAGFAQNGMYVEALDMVREMG 218
Query: 103 STGT-GVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDG--YVWSALMDMYFKC 159
G D+ T+ S+L A D N GK +HG+ V+ G DG ++ S+L+DMY KC
Sbjct: 219 KNGKLKPDSFTLSSILPIFAEHVDVNKGKEIHGYAVRNG---FDGDVFIGSSLIDMYAKC 275
Query: 160 GHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTS 219
+ + + F +P +D + W+ ++AG VQ +F + F ML +NV P + +S
Sbjct: 276 NRLECSLRAFYILPR--KDAISWNSIIAGCVQNGEFDRGLGFFRRMLKENVKPMAVSFSS 333
Query: 220 VLSACAHSGALDQGKLVHQYIECKKVSLNSVE-LGTALVDM 259
V+ ACAH AL G+ +H I ++ + E + ++LVDM
Sbjct: 334 VIPACAHLTALSLGRQLHGCIV--RLGFDDNEFIASSLVDM 372
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 4/229 (1%)
Query: 6 VEPDQHTFPLLLKMFSKPV-VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSAC 64
++PD T +L +F++ V V I+ + GFD D F G++LI +A + +
Sbjct: 223 LKPDSFTLSSILPIFAEHVDVNKGKEIHGYAVRNGFDGDVFIGSSLIDMYAKCNRLECSL 282
Query: 65 QVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAG 124
+ F KD I+W ++I G V+N L F +M A++ SV+ A A
Sbjct: 283 RAFYILPRKDAISWNSIIAGCVQNGEFDRGLGFFRRMLKENVKPMAVSFSSVIPACAHLT 342
Query: 125 DDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSV 184
+ G+ +HG V+ G + ++ S+L+DMY KCG+ A VFD + RD+V W+
Sbjct: 343 ALSLGRQLHGCIVRLG-FDDNEFIASSLVDMYAKCGNIKMARYVFDRI--DKRDMVAWTA 399
Query: 185 LVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
++ G DA+ +F NML D V P +VL+AC+H+G +D+G
Sbjct: 400 IIMGCAMHGHALDAVSLFENMLEDGVRPCYVAFMAVLTACSHAGLVDEG 448
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 94/199 (47%), Gaps = 20/199 (10%)
Query: 77 AWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFY 136
AW+++I Y + L + F MRS + S+L+A+ + +H
Sbjct: 77 AWSSIIKCYTSHSLLHLSFSSFNSMRSLSVPPNRHVFPSLLKASTLLKHHKLAHSLHACT 136
Query: 137 VQAGRVQLDGYVWSALMDMYFKCGHC---------------DDACKVFDEMPYSYRDVVC 181
V+ G + D Y+ +AL++ Y K + D KVFD MP RDVV
Sbjct: 137 VRLG-LDSDLYIANALINTYAKFHNAGKVFDVFPKRGESGIDCVKKVFDMMP--VRDVVS 193
Query: 182 WSVLVAGYVQCNKFQDAIRVFWNMLSD-NVVPNEFTLTSVLSACAHSGALDQGKLVHQYI 240
W+ ++AG+ Q + +A+ + M + + P+ FTL+S+L A +++GK +H Y
Sbjct: 194 WNTVIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEHVDVNKGKEIHGY- 252
Query: 241 ECKKVSLNSVELGTALVDM 259
+ V +G++L+DM
Sbjct: 253 AVRNGFDGDVFIGSSLIDM 271
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 82/182 (45%), Gaps = 10/182 (5%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
++ I +LGFD + F ++L+ +A G I A VFD +D++AWTA+I G +
Sbjct: 350 LHGCIVRLGFDDNEFIASSLVDMYAKCGNIKMARYVFDRIDKRDMVAWTAIIMGCAMHGH 409
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAG--DDN---FGKWVHGFYVQAGRVQLD 145
+A+ F M G + ++VL A + AG D+ F F + G L+
Sbjct: 410 ALDAVSLFENMLEDGVRPCYVAFMAVLTACSHAGLVDEGWRYFNSMERDFGIAPG---LE 466
Query: 146 GYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNM 205
Y +A+ D+ + G ++A M WS+L+A + A +V +
Sbjct: 467 HY--AAVADLLGRAGRLEEAYDFISNMRGVQPTGSVWSILLAACRAHKSVELAEKVLDKL 524
Query: 206 LS 207
LS
Sbjct: 525 LS 526
>Medtr4g131300.1 | PPR containing plant-like protein | HC |
chr4:54775340-54772788 | 20130731
Length = 734
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/214 (37%), Positives = 117/214 (54%), Gaps = 8/214 (3%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTG 107
NAL++ +A G + A + F+ S K+ I W+A++ GY + +ALK F KM S+G
Sbjct: 258 NALVTMYAKCGSLDDAVRTFEFSGDKNSITWSAMVTGYAQGGDSDKALKLFNKMHSSGVL 317
Query: 108 VDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACK 167
T+V V+ A + GK +H F + G L YV SA++DMY KCG DA K
Sbjct: 318 PSEFTLVGVINACSDLCAVVEGKQMHSFAFKLG-FGLQLYVLSAVVDMYAKCGSLADARK 376
Query: 168 VFD--EMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACA 225
F+ + P DVV W+ ++ GYVQ ++ + ++ M + V+PNE T+ SVL AC+
Sbjct: 377 GFECVQQP----DVVLWTSIITGYVQNGDYEGGLNLYGKMQMERVIPNELTMASVLRACS 432
Query: 226 HSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
ALDQGK +H I L V +G+AL M
Sbjct: 433 SLAALDQGKQMHARIIKYGFKL-EVPIGSALSAM 465
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 123/235 (52%), Gaps = 6/235 (2%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK--PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSG 58
M GV P + T ++ S VVE M ++ FKLGF L + +A++ +A G
Sbjct: 311 MHSSGVLPSEFTLVGVINACSDLCAVVEGKQM-HSFAFKLGFGLQLYVLSAVVDMYAKCG 369
Query: 59 FIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLR 118
+ A + F+ D++ WT++I GYV+N L + KM+ + LT+ SVLR
Sbjct: 370 SLADARKGFECVQQPDVVLWTSIITGYVQNGDYEGGLNLYGKMQMERVIPNELTMASVLR 429
Query: 119 AAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRD 178
A + + GK +H ++ G +L+ + SAL MY KCG DD +F MP RD
Sbjct: 430 ACSSLAALDQGKQMHARIIKYG-FKLEVPIGSALSAMYTKCGSLDDGYLIFWRMP--SRD 486
Query: 179 VVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
V+ W+ +++G Q A+ +F ML + + P+ T ++LSAC+H G +D+G
Sbjct: 487 VISWNAMISGLSQNGHGNKALELFEKMLLEGIKPDPVTFVNLLSACSHMGLVDRG 541
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 127/245 (51%), Gaps = 14/245 (5%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK--PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSG 58
MR V P+ HT + S VV ++ K G D + G++L++ + +G
Sbjct: 109 MRANNVIPNAHTLAGVFSAASNLSDVVAGK-QAHSVAVKTGCSGDVYVGSSLLNMYCKTG 167
Query: 59 FIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLR 118
F+ A ++FD ++ ++W +I+GY +D+ +A++ F MR + + SVL
Sbjct: 168 FVFDARKLFDRMPERNTVSWATMISGYASSDIADKAVEVFELMRREEEIQNEFALTSVLS 227
Query: 119 AAAMAGDDNF---GKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYS 175
A D F G+ VH ++ G + + V +AL+ MY KCG DDA + F+ +S
Sbjct: 228 ALT---SDVFVYTGRQVHSLAIKNGLLAIVS-VANALVTMYAKCGSLDDAVRTFE---FS 280
Query: 176 Y-RDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGK 234
++ + WS +V GY Q A+++F M S V+P+EFTL V++AC+ A+ +GK
Sbjct: 281 GDKNSITWSAMVTGYAQGGDSDKALKLFNKMHSSGVLPSEFTLVGVINACSDLCAVVEGK 340
Query: 235 LVHQY 239
+H +
Sbjct: 341 QMHSF 345
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 117/235 (49%), Gaps = 10/235 (4%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFD--ESSVKDIIAWTALINGYVKN 88
++A+I K G + N ++ +A + + A +FD + KD ++W +LIN + +N
Sbjct: 33 LHARILKTGSISSIYVTNTFLNLYAKTNHLSHALTLFDSINDNDKDDVSWNSLINAFSQN 92
Query: 89 DLPSE---ALKCFVK-MRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQL 144
S A+ F + MR+ +A T+ V AA+ D GK H V+ G
Sbjct: 93 HSSSSSSFAISLFRRMMRANNVIPNAHTLAGVFSAASNLSDVVAGKQAHSVAVKTG-CSG 151
Query: 145 DGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWN 204
D YV S+L++MY K G DA K+FD MP R+ V W+ +++GY + A+ VF
Sbjct: 152 DVYVGSSLLNMYCKTGFVFDARKLFDRMP--ERNTVSWATMISGYASSDIADKAVEVFEL 209
Query: 205 MLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
M + + NEF LTSVLSA + G+ VH + K L V + ALV M
Sbjct: 210 MRREEEIQNEFALTSVLSALTSDVFVYTGRQVHS-LAIKNGLLAIVSVANALVTM 263
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 68/135 (50%), Gaps = 6/135 (4%)
Query: 129 GKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAG 188
G+ +H ++ G + YV + +++Y K H A +FD + + +D V W+ L+
Sbjct: 30 GRTLHARILKTGSIS-SIYVTNTFLNLYAKTNHLSHALTLFDSINDNDKDDVSWNSLINA 88
Query: 189 YVQCNKFQD---AIRVFWNML-SDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKK 244
+ Q + AI +F M+ ++NV+PN TL V SA ++ + GK H + K
Sbjct: 89 FSQNHSSSSSSFAISLFRRMMRANNVIPNAHTLAGVFSAASNLSDVVAGKQAHS-VAVKT 147
Query: 245 VSLNSVELGTALVDM 259
V +G++L++M
Sbjct: 148 GCSGDVYVGSSLLNM 162
>Medtr5g006570.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:988953-991582 | 20130731
Length = 838
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 126/237 (53%), Gaps = 4/237 (1%)
Query: 5 GVEPDQHTFPLLLKMFSKPVV-EDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSA 63
G+ PD TFP LL SK + + ++ + K+G D F N+LI +A G +
Sbjct: 127 GIVPDNFTFPFLLSACSKIMAFSEGVQVHGVVVKMGLVKDLFVANSLIHFYAACGKVDLG 186
Query: 64 CQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMA 123
+VFDE +++++WT+LINGY ++ EA+ F +M G + +T+V + A A
Sbjct: 187 RKVFDEMLERNVVSWTSLINGYSVVNMAKEAVCLFFEMVEVGVEPNPVTMVCAISACAKL 246
Query: 124 GDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWS 183
D GK V + G V+ + V +AL+DMY KCG ++FDE +S +++V ++
Sbjct: 247 KDLELGKKVCNLMTELG-VKSNTLVVNALLDMYMKCGDMYAVREIFDE--FSDKNLVMYN 303
Query: 184 VLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYI 240
+++ YVQ + + V ML P++ T+ S ++ACA G L GK H Y+
Sbjct: 304 TIMSNYVQHGLAGEVLVVLDEMLQKGQRPDKVTMLSTIAACAQLGDLSVGKSSHAYV 360
Score = 125 bits (314), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 145/291 (49%), Gaps = 36/291 (12%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M + GVEP+ T + +K +E + + +LG + NAL+ + G
Sbjct: 224 MVEVGVEPNPVTMVCAISACAKLKDLELGKKVCNLMTELGVKSNTLVVNALLDMYMKCGD 283
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ + ++FDE S K+++ + +++ YV++ L E L +M G D +T++S + A
Sbjct: 284 MYAVREIFDEFSDKNLVMYNTIMSNYVQHGLAGEVLVVLDEMLQKGQRPDKVTMLSTIAA 343
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
A GD + GK H + + G +LD + +A++DMY KCG + ACKVFD M S + V
Sbjct: 344 CAQLGDLSVGKSSHAYVFRNGLERLDN-ISNAIIDMYMKCGKREAACKVFDSM--SNKTV 400
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVP--------------------------- 212
V W+ L+AG V+ + + A+R+F M N+V
Sbjct: 401 VTWNSLIAGLVRDGELELALRIFGEMPESNLVSWNTMIGAMVQASMFEEAIDLLREMQNQ 460
Query: 213 ----NEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
+ T+ + SAC + GALD K ++ YIE + ++ ++LGTALVDM
Sbjct: 461 GIKGDRVTMVGIASACGYLGALDLAKWIYTYIEKNDIHID-MQLGTALVDM 510
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 98/187 (52%), Gaps = 3/187 (1%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTG 107
N+LI+ G + A ++F E ++++W +I V+ + EA+ +M++ G
Sbjct: 404 NSLIAGLVRDGELELALRIFGEMPESNLVSWNTMIGAMVQASMFEEAIDLLREMQNQGIK 463
Query: 108 VDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACK 167
D +T+V + A G + KW++ Y++ + +D + +AL+DM+ +CG +A +
Sbjct: 464 GDRVTMVGIASACGYLGALDLAKWIYT-YIEKNDIHIDMQLGTALVDMFSRCGDPLNAMR 522
Query: 168 VFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHS 227
VF+ M RDV W+ + + AI +F ML +V ++F ++L+A +H
Sbjct: 523 VFENM--EKRDVSAWTAAIRVKAVEGNAKGAIELFDEMLKQDVKADDFVFVALLTAFSHG 580
Query: 228 GALDQGK 234
G +DQG+
Sbjct: 581 GYVDQGR 587
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 106/221 (47%), Gaps = 10/221 (4%)
Query: 45 FAGNALISAFANSGF---IGSACQVF--DESSVKDIIAWTALINGYVKNDLPSEALKCFV 99
F N LI+A G + A F DE + + LI GY + L EA+ ++
Sbjct: 61 FNINKLIAACVQMGTHESLNYALNAFKEDEGTKCSLYTCNTLIRGYAASGLCKEAIFIYL 120
Query: 100 KMRST-GTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFK 158
M G D T +L A + + G VHG V+ G V+ D +V ++L+ Y
Sbjct: 121 HMIIVMGIVPDNFTFPFLLSACSKIMAFSEGVQVHGVVVKMGLVK-DLFVANSLIHFYAA 179
Query: 159 CGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLT 218
CG D KVFDEM R+VV W+ L+ GY N ++A+ +F+ M+ V PN T+
Sbjct: 180 CGKVDLGRKVFDEML--ERNVVSWTSLINGYSVVNMAKEAVCLFFEMVEVGVEPNPVTMV 237
Query: 219 SVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
+SACA L+ GK V + V N++ + AL+DM
Sbjct: 238 CAISACAKLKDLELGKKVCNLMTELGVKSNTLVV-NALLDM 277
>Medtr3g096440.1 | PPR containing plant-like protein | HC |
chr3:44085648-44087691 | 20130731
Length = 580
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/202 (37%), Positives = 112/202 (55%), Gaps = 5/202 (2%)
Query: 35 IFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEA 94
+F+ + D + +++ + + I AC+VF+E VK ++W ALI+G+VKN EA
Sbjct: 202 LFRSMVEKDAVSWTSMVVTYTRASRIDDACKVFNEMPVKYTVSWAALISGFVKNGRCYEA 261
Query: 95 LKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQ---LDGYVWSA 151
L+ F +M G A T VSVL A A GK VH ++ GR + YV++A
Sbjct: 262 LEVFHQMIKEGVLPRAQTFVSVLDACASEALIGRGKQVHCQIIR-GRSSDNLFNVYVFNA 320
Query: 152 LMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVV 211
LMDMY KCG A +F EM +DVV W+ L+ G+ Q + +D++ VF M+ N+
Sbjct: 321 LMDMYAKCGDMKSAENLF-EMMIHVKDVVSWNTLITGFAQNGRGEDSLAVFDRMIESNIE 379
Query: 212 PNEFTLTSVLSACAHSGALDQG 233
PN T VLSAC H+G ++ G
Sbjct: 380 PNHVTFLGVLSACNHAGLVNAG 401
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 123/246 (50%), Gaps = 36/246 (14%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRST--G 105
N L+S ++ G A ++FDE ++++++ +LI+G +++ EA+K F +M++ G
Sbjct: 81 NTLLSFYSKKGVFNQAYKLFDEMPQRNLVSYNSLISGLTRHEFHKEAVKFFREMQNGVGG 140
Query: 106 TGVDALTVVSVLRAAAMAGDDNFGKWVHGF-------------------YVQAGR----- 141
+D T+VS++ + + + VHG Y + G
Sbjct: 141 LMLDEFTLVSLVSNCSCLDTVKWLRQVHGVATIVGFRTNLILNNALIDAYGKCGEPNSSF 200
Query: 142 ------VQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKF 195
V+ D W++++ Y + DDACKVF+EMP Y V W+ L++G+V+ +
Sbjct: 201 CLFRSMVEKDAVSWTSMVVTYTRASRIDDACKVFNEMPVKY--TVSWAALISGFVKNGRC 258
Query: 196 QDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLN--SVELG 253
+A+ VF M+ + V+P T SVL ACA + +GK VH I + S N +V +
Sbjct: 259 YEALEVFHQMIKEGVLPRAQTFVSVLDACASEALIGRGKQVHCQIIRGRSSDNLFNVYVF 318
Query: 254 TALVDM 259
AL+DM
Sbjct: 319 NALMDM 324
>Medtr4g085110.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:33294066-33291364 | 20130731
Length = 814
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 134/256 (52%), Gaps = 5/256 (1%)
Query: 5 GVEPDQHTFPLLLKMFSKPVVED-PFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSA 63
G+ P T +LK + + ++ + LG D F +L+ + N G SA
Sbjct: 234 GIRPSSVTMASILKACGESGHKKLGTCVHVFVLALGMGDDVFVLTSLVDMYCNVGDTESA 293
Query: 64 CQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMA 123
VF+ + +I+W A+I+G V+N + E+ F K+ +G G D+ T+VS++R +
Sbjct: 294 FLVFNRMCSRSLISWNAMISGCVQNGMVPESFSLFHKLVQSGDGFDSGTLVSLIRGCSQT 353
Query: 124 GDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWS 183
D GK +H ++ G ++ + + +A++DMY KCG A VF M R+V+ W+
Sbjct: 354 SDLENGKVLHACIIRKG-LESNLVLSTAIVDMYSKCGAIKQASDVFRTM--EKRNVITWT 410
Query: 184 VLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECK 243
++ G Q + A+++F M +NV N TL S++ CAH G+L +G+ VH ++
Sbjct: 411 AMLVGLSQNGYAEGALKLFCRMQEENVAANSVTLVSLVHCCAHLGSLKKGRSVHGHLIRH 470
Query: 244 KVSLNSVELGTALVDM 259
N+V + +AL+DM
Sbjct: 471 GYEFNAVNM-SALIDM 485
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/247 (33%), Positives = 130/247 (52%), Gaps = 5/247 (2%)
Query: 13 FPLLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSV 72
F LL+ FS ++ D I+AQI + F LI ++N GF+ A +VFD+
Sbjct: 42 FSSLLREFSNTLI-DVKSIHAQIIRNYASNQHFLATKLIKIYSNLGFLNYAYKVFDQCPH 100
Query: 73 KDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWV 132
++ I A++ G++KN E K F M +++ T V L+A + DD G +
Sbjct: 101 RETILCNAMMGGFLKNMEYKEVPKLFKMMGLRDIELNSYTCVFGLKACTVLLDDEVGMEL 160
Query: 133 HGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQC 192
V+ G L +V S++++ KCG+ +DA VFD MP RDVVCW+ ++ GYVQ
Sbjct: 161 VRMAVRKG-FHLHPHVGSSMINFLVKCGNLNDARMVFDGMP--ERDVVCWNSIIGGYVQE 217
Query: 193 NKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVEL 252
++ I++F M+S + P+ T+ S+L AC SG G VH ++ + + V +
Sbjct: 218 GLLKEVIQLFVEMISCGIRPSSVTMASILKACGESGHKKLGTCVHVFVLALGMG-DDVFV 276
Query: 253 GTALVDM 259
T+LVDM
Sbjct: 277 LTSLVDM 283
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 127/240 (52%), Gaps = 3/240 (1%)
Query: 3 QKGVEPDQHTFPLLLKMFSKPV-VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIG 61
Q G D T L++ S+ +E+ +++A I + G + + A++ ++ G I
Sbjct: 333 QSGDGFDSGTLVSLIRGCSQTSDLENGKVLHACIIRKGLESNLVLSTAIVDMYSKCGAIK 392
Query: 62 SACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAA 121
A VF +++I WTA++ G +N ALK F +M+ +++T+VS++ A
Sbjct: 393 QASDVFRTMEKRNVITWTAMLVGLSQNGYAEGALKLFCRMQEENVAANSVTLVSLVHCCA 452
Query: 122 MAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVC 181
G G+ VHG ++ G + + SAL+DMY KCG A K+F + +DV+
Sbjct: 453 HLGSLKKGRSVHGHLIRHG-YEFNAVNMSALIDMYAKCGKIHSAEKLFYN-GFHLKDVIL 510
Query: 182 WSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIE 241
+ ++ GY + A+RV+ M+ + + PN+ T S+L+AC+HSG +++G+ + +E
Sbjct: 511 CNSMIMGYGMHGQGHQALRVYDRMIDERLKPNQTTFVSMLTACSHSGLVEEGRTLFHCME 570
Score = 111 bits (277), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 118/223 (52%), Gaps = 4/223 (1%)
Query: 37 KLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALK 96
+ GF L G+++I+ G + A VFD +D++ W ++I GYV+ L E ++
Sbjct: 166 RKGFHLHPHVGSSMINFLVKCGNLNDARMVFDGMPERDVVCWNSIIGGYVQEGLLKEVIQ 225
Query: 97 CFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMY 156
FV+M S G ++T+ S+L+A +G G VH F + G + D +V ++L+DMY
Sbjct: 226 LFVEMISCGIRPSSVTMASILKACGESGHKKLGTCVHVFVLALG-MGDDVFVLTSLVDMY 284
Query: 157 FKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFT 216
G + A VF+ M R ++ W+ +++G VQ ++ +F ++ + T
Sbjct: 285 CNVGDTESAFLVFNRM--CSRSLISWNAMISGCVQNGMVPESFSLFHKLVQSGDGFDSGT 342
Query: 217 LTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
L S++ C+ + L+ GK++H I K + N V L TA+VDM
Sbjct: 343 LVSLIRGCSQTSDLENGKVLHACIIRKGLESNLV-LSTAIVDM 384
>Medtr5g020650.1 | PPR containing plant-like protein | HC |
chr5:7912169-7910613 | 20130731
Length = 518
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 127/266 (47%), Gaps = 35/266 (13%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M + + +TFP LLK S + + I+ QI K GF + +A N+L+ +A SG
Sbjct: 102 MLHHSIPHNAYTFPFLLKACSALSALAETHQIHVQIIKRGFGSEVYATNSLLRVYAISGS 161
Query: 60 IGSACQVFDESSVKDI-------------------------------IAWTALINGYVKN 88
I SA +FD +DI I+WT++I G+V+
Sbjct: 162 IKSAHVLFDLLPSRDIVSWNTMIDGYIKCGNVEMAYKIFQAMPEKNVISWTSMIVGFVRT 221
Query: 89 DLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYV 148
+ EAL +M G D +T+ L A A G GKW+H Y+ ++++D +
Sbjct: 222 GMHKEALCLLQQMLVAGIKPDKITLSCSLSACAGLGALEQGKWIHT-YIGKNKIKIDPVL 280
Query: 149 WSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSD 208
AL+DMY KCG A VF ++ + V W+ ++ G+ K +A+ F M
Sbjct: 281 GCALIDMYVKCGEMKKALLVFSKL--EKKCVYTWTAIIGGFAVHGKGSEALDWFTQMQKA 338
Query: 209 NVVPNEFTLTSVLSACAHSGALDQGK 234
+ P FT T+VL+AC+H+G +++GK
Sbjct: 339 GIKPTSFTFTAVLTACSHTGLVEEGK 364
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 128/261 (49%), Gaps = 35/261 (13%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGF--IGSACQVFDESSVKDIIAWTALINGYVKN 88
I+ Q+ K G + + L++ +A+ F + A VFD S + + W +I Y +
Sbjct: 30 IHGQLLKKGTIRHKLTVSRLLTTYASMEFSNLTYARMVFDRISSPNTVMWNTMIRAYSNS 89
Query: 89 DLPSEALKCFVKMRSTGTGVDALTVVSVLRA----AAMAGDDN---------FGKWVHG- 134
+ P EAL + +M +A T +L+A +A+A FG V+
Sbjct: 90 NDPEEALLLYHQMLHHSIPHNAYTFPFLLKACSALSALAETHQIHVQIIKRGFGSEVYAT 149
Query: 135 -----FYVQAGRVQ-----------LDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRD 178
Y +G ++ D W+ ++D Y KCG+ + A K+F MP ++
Sbjct: 150 NSLLRVYAISGSIKSAHVLFDLLPSRDIVSWNTMIDGYIKCGNVEMAYKIFQAMPE--KN 207
Query: 179 VVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQ 238
V+ W+ ++ G+V+ ++A+ + ML + P++ TL+ LSACA GAL+QGK +H
Sbjct: 208 VISWTSMIVGFVRTGMHKEALCLLQQMLVAGIKPDKITLSCSLSACAGLGALEQGKWIHT 267
Query: 239 YIECKKVSLNSVELGTALVDM 259
YI K+ ++ V LG AL+DM
Sbjct: 268 YIGKNKIKIDPV-LGCALIDM 287
>Medtr8g068150.1 | SLOW growth protein, putative | HC |
chr8:28404022-28408146 | 20130731
Length = 633
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 131/275 (47%), Gaps = 39/275 (14%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDP---FMIYAQIFKLGFDLDRFAGNALISAFANS 57
M V PD TFP LLK + ++ P F ++ + + GF D F NAL++ +
Sbjct: 107 MLNSSVLPDSFTFPFLLKACANVLISAPQFGFQVHCHVLRNGFGSDVFVNNALLNFYCGF 166
Query: 58 GFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVL 117
G + +A +VFDES V+D +++ +ING+ + S + F +MR D T V++L
Sbjct: 167 GDVVNAYKVFDESFVRDCVSFNTMINGFARKGDVSGCFRVFGEMRGVCVRPDEYTFVALL 226
Query: 118 RAAAMAGDDNFGKWVHGF---------------------YVQAGRVQLDGYV-------- 148
++ D G+ VHG Y + GR+ + V
Sbjct: 227 SGCSVLEDYRIGRQVHGLVYRELGCFGGNVLLVNKLVDMYAKCGRLVMAETVLSVVKPGK 286
Query: 149 -----WSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFW 203
W++L+ Y G A ++FD+M RDVV W+ +++GY FQ+A+ +F
Sbjct: 287 SVVAAWTSLVSAYALRGEVKVARRLFDQM--GERDVVSWTAMISGYSHAGCFQEALELFV 344
Query: 204 NMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQ 238
+ + P+E + + LSACA GAL+ G+ +H+
Sbjct: 345 KLEGLGMKPDEVAVVAALSACARLGALELGRRIHR 379
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 124/274 (45%), Gaps = 43/274 (15%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPFMIYAQIFKLGF-DLDRFAGN----------- 48
MR V PD++TF LL S V+ED + I Q+ L + +L F GN
Sbjct: 210 MRGVCVRPDEYTFVALLSGCS--VLED-YRIGRQVHGLVYRELGCFGGNVLLVNKLVDMY 266
Query: 49 ---------------------------ALISAFANSGFIGSACQVFDESSVKDIIAWTAL 81
+L+SA+A G + A ++FD+ +D+++WTA+
Sbjct: 267 AKCGRLVMAETVLSVVKPGKSVVAAWTSLVSAYALRGEVKVARRLFDQMGERDVVSWTAM 326
Query: 82 INGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAG- 140
I+GY EAL+ FVK+ G D + VV+ L A A G G+ +H Y
Sbjct: 327 ISGYSHAGCFQEALELFVKLEGLGMKPDEVAVVAALSACARLGALELGRRIHRQYAGENW 386
Query: 141 RVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIR 200
++ SA++DMY KCG D A VF + + ++ +++G + + A
Sbjct: 387 TCSINRGFTSAVVDMYAKCGSIDIALDVFRKTSDDKKTTFLYNSIISGLAHHGRGEYAKN 446
Query: 201 VFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGK 234
+F M + P+ T +VLSAC H G +D GK
Sbjct: 447 LFEEMGLLGLKPDNITFVAVLSACGHCGLVDFGK 480
>Medtr1g073160.1 | PPR containing plant-like protein | HC |
chr1:32444344-32441927 | 20130731
Length = 627
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/268 (32%), Positives = 141/268 (52%), Gaps = 13/268 (4%)
Query: 1 MRQKGVEPDQHTFPLLLKMF--SKPVVEDPFMIYAQIFKLGFDL----DRFAGNALISAF 54
M+ +G D T LL M S + ++ + K G DL D G++LI +
Sbjct: 223 MQCQGYNADAFTVASLLPMCCDSDGKFDHGRELHCYLVKNGLDLKMCSDVHMGSSLIDMY 282
Query: 55 ANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKM-RSTGTGVDALTV 113
+ S + + +VFD+ ++I WTA+INGYV+N P AL F +M R + +++
Sbjct: 283 SRSNKLVLSRRVFDQMKSRNIYVWTAMINGYVQNGAPEGALILFREMQRKDRIRPNRVSL 342
Query: 114 VSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYV--WSALMDMYFKCGHCDDACKVFDE 171
VSVL A + GK VH F + +++ + Y+ +AL+DMY KCG D A +VFD
Sbjct: 343 VSVLPACGLLVGLMGGKQVHAFSI---KMEFNDYISLRNALIDMYAKCGSLDYARRVFDN 399
Query: 172 MPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALD 231
YS +D + WS +++ Y K Q+A+ ++ ML + P+ T+ VLSAC SG +D
Sbjct: 400 GSYS-KDAITWSSIISAYGLHGKGQEALTTYYEMLQQGIKPDMITVVGVLSACCRSGLVD 458
Query: 232 QGKLVHQYIECKKVSLNSVELGTALVDM 259
+G ++ + + SVE+ +VD+
Sbjct: 459 EGISIYNSLTTEYEMKPSVEICGCVVDL 486
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 115/237 (48%), Gaps = 13/237 (5%)
Query: 32 YAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLP 91
++QI F + F LISA+A G + VFD K++ W +LINGYVKN
Sbjct: 49 HSQILTNCFSQNAFLTTRLISAYATFGDSIMSKLVFDSVHTKNVYLWNSLINGYVKNHQF 108
Query: 92 SEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSA 151
A+ F +M D T+ ++ + + D GK +HG ++ G V D V ++
Sbjct: 109 DNAIVLFRQM-GRCLLPDDYTLATISKVSGEIQDLVLGKLIHGKSLRIGFVS-DIVVGNS 166
Query: 152 LMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNK-----FQDAIRVFWNML 206
+M MY +C DA KVFDEMP R+V ++V+++G + D F M
Sbjct: 167 VMSMYIRCREFGDAMKVFDEMP--QRNVGSFNVIISGCAALGNLDYSLYADLWNFFRRMQ 224
Query: 207 SDNVVPNEFTLTSVLSACAHS-GALDQGKLVHQYIECKKVSL---NSVELGTALVDM 259
+ FT+ S+L C S G D G+ +H Y+ + L + V +G++L+DM
Sbjct: 225 CQGYNADAFTVASLLPMCCDSDGKFDHGRELHCYLVKNGLDLKMCSDVHMGSSLIDM 281
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 138/274 (50%), Gaps = 22/274 (8%)
Query: 2 RQKG--VEPDQHTFPLLLKMFSKPVVEDPFM---IYAQIFKLGFDLDRFAGNALISAFAN 56
RQ G + PD +T + K+ + ++D + I+ + ++GF D GN+++S +
Sbjct: 116 RQMGRCLLPDDYTLATISKVSGE--IQDLVLGKLIHGKSLRIGFVSDIVVGNSVMSMYIR 173
Query: 57 SGFIGSACQVFDESSVKDIIAWTALIN-----GYVKNDLPSEALKCFVKMRSTGTGVDAL 111
G A +VFDE +++ ++ +I+ G + L ++ F +M+ G DA
Sbjct: 174 CREFGDAMKVFDEMPQRNVGSFNVIISGCAALGNLDYSLYADLWNFFRRMQCQGYNADAF 233
Query: 112 TVVSVLRAAAMA-GDDNFGKWVHGFYVQAG---RVQLDGYVWSALMDMYFKCGHCDDACK 167
TV S+L + G + G+ +H + V+ G ++ D ++ S+L+DMY + + +
Sbjct: 234 TVASLLPMCCDSDGKFDHGRELHCYLVKNGLDLKMCSDVHMGSSLIDMYSRSNKLVLSRR 293
Query: 168 VFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNM-LSDNVVPNEFTLTSVLSACAH 226
VFD+M R++ W+ ++ GYVQ + A+ +F M D + PN +L SVL AC
Sbjct: 294 VFDQM--KSRNIYVWTAMINGYVQNGAPEGALILFREMQRKDRIRPNRVSLVSVLPACGL 351
Query: 227 SGALDQGKLVHQYIECKKVSLNS-VELGTALVDM 259
L GK VH + K+ N + L AL+DM
Sbjct: 352 LVGLMGGKQVHAF--SIKMEFNDYISLRNALIDM 383
>Medtr8g028890.1 | PPR containing plant-like protein | HC |
chr8:11200768-11198782 | 20130731
Length = 655
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/238 (32%), Positives = 131/238 (55%), Gaps = 12/238 (5%)
Query: 8 PDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQV 66
PD TF L+ + ++ +E ++ K+GFDLD F G AL+ +A GF+ +A +V
Sbjct: 165 PDHITFNGLICLCTQFNDIEMGVQLHCFTVKVGFDLDCFVGCALVGLYAKCGFVENARRV 224
Query: 67 FDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDD 126
F + S +D++ W +++ YV N LP EA + F MR D T S+L ++ DD
Sbjct: 225 FCDVSCRDLVMWNVMVSCYVFNSLPEEAFRVFNSMRLDVVNGDEFTFSSLL---SVISDD 281
Query: 127 -----NFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVC 181
+FGK VH ++ D V SAL++MY K + DA +VFDEM S R+VV
Sbjct: 282 ALEYYDFGKQVHSLVLRQS-FDSDVLVASALINMYAKSENIIDARRVFDEM--SIRNVVA 338
Query: 182 WSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQY 239
W+ ++ G+ + +++ ML + +P+E T++S++S+C ++ A+ + VH +
Sbjct: 339 WNTMIVGFGNHGDGNEVMKLVKEMLREGFLPDELTISSIISSCGYASAITETLQVHAF 396
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 114/236 (48%), Gaps = 6/236 (2%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVED---PFMIYAQIFKLGFDLDRFAGNALISAFANS 57
MR V D+ TF LL + S +E +++ + + FD D +ALI+ +A S
Sbjct: 259 MRLDVVNGDEFTFSSLLSVISDDALEYYDFGKQVHSLVLRQSFDSDVLVASALINMYAKS 318
Query: 58 GFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVL 117
I A +VFDE S+++++AW +I G+ + +E +K +M G D LT+ S++
Sbjct: 319 ENIIDARRVFDEMSIRNVVAWNTMIVGFGNHGDGNEVMKLVKEMLREGFLPDELTISSII 378
Query: 118 RAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYR 177
+ A VH F V+ Q V ++L+ Y KCG A K F+ S
Sbjct: 379 SSCGYASAITETLQVHAFAVKLS-CQDFLSVANSLISAYSKCGSITSAFKCFELT--SQP 435
Query: 178 DVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
D+V W+ L+ Y + + +F MLS + P+ VLSACAH G + +G
Sbjct: 436 DLVTWTSLIYAYAFHGLAEKSTEMFEKMLSYGIKPDRIAFLGVLSACAHCGLVTKG 491
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 120/238 (50%), Gaps = 14/238 (5%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
++A + K GF N ++S + A ++F+E V+++++W +I V +
Sbjct: 82 LHAHLIKFGFCQVLSLQNQILSVYLKCQEAEDAKKLFEELPVRNVVSWNIMIRASVGRND 141
Query: 91 PSEA------LKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQL 144
+E+ F +M D +T ++ D G +H F V+ G L
Sbjct: 142 ENESSGMRLCFSYFRRMLLEMMVPDHITFNGLICLCTQFNDIEMGVQLHCFTVKVG-FDL 200
Query: 145 DGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWN 204
D +V AL+ +Y KCG ++A +VF ++ S RD+V W+V+V+ YV + ++A RVF +
Sbjct: 201 DCFVGCALVGLYAKCGFVENARRVFCDV--SCRDLVMWNVMVSCYVFNSLPEEAFRVFNS 258
Query: 205 MLSDNVVPNEFTLTSVLSACAHSGA--LDQGKLVHQYIECKKVSLNS-VELGTALVDM 259
M D V +EFT +S+LS + D GK VH + + S +S V + +AL++M
Sbjct: 259 MRLDVVNGDEFTFSSLLSVISDDALEYYDFGKQVHSLV--LRQSFDSDVLVASALINM 314
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 81/174 (46%), Gaps = 1/174 (0%)
Query: 1 MRQKGVEPDQHTFPLLLKMFS-KPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M ++G PD+ T ++ + + ++A KL N+LISA++ G
Sbjct: 362 MLREGFLPDELTISSIISSCGYASAITETLQVHAFAVKLSCQDFLSVANSLISAYSKCGS 421
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
I SA + F+ +S D++ WT+LI Y + L ++ + F KM S G D + + VL A
Sbjct: 422 ITSAFKCFELTSQPDLVTWTSLIYAYAFHGLAEKSTEMFEKMLSYGIKPDRIAFLGVLSA 481
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMP 173
A G G A ++ D ++ L+D+ + G ++A ++ MP
Sbjct: 482 CAHCGLVTKGLHYFKLMTNAYQIVPDSEHYTCLVDLLGRYGLINEAFEILRSMP 535
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 63/129 (48%), Gaps = 9/129 (6%)
Query: 115 SVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPY 174
+ L+ +A G GK +H ++ G Q+ + + ++ +Y KC +DA K+F+E+P
Sbjct: 65 NALKISAKKGYLPEGKQLHAHLIKFGFCQVLS-LQNQILSVYLKCQEAEDAKKLFEELP- 122
Query: 175 SYRDVVCWSVLVAGYVQCNKFQDA------IRVFWNMLSDNVVPNEFTLTSVLSACAHSG 228
R+VV W++++ V N ++ F ML + +VP+ T ++ C
Sbjct: 123 -VRNVVSWNIMIRASVGRNDENESSGMRLCFSYFRRMLLEMMVPDHITFNGLICLCTQFN 181
Query: 229 ALDQGKLVH 237
++ G +H
Sbjct: 182 DIEMGVQLH 190
>Medtr1g052100.1 | PPR containing plant-like protein | HC |
chr1:20983048-20985397 | 20130731
Length = 733
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/238 (33%), Positives = 135/238 (56%), Gaps = 9/238 (3%)
Query: 1 MRQKGVEPDQHTFPLLLKMF-SKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
MR++G+EPD T+ LL S +VE MI++ + K G + NALIS+++ +G
Sbjct: 381 MRREGIEPDAFTYGSLLSASDSLQMVE---MIHSVLCKNGLNKVEVL-NALISSYSRNGQ 436
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
I A Q+F + + K +I+W ++I+G+V N P + L+ F + +T +A ++ L
Sbjct: 437 IKRAFQIFSDLAYKSLISWNSIISGFVLNGYPMQGLEKFSALLNTHLKPNAYSLSLALSI 496
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
+ D + GK VHG+ ++ G + + +AL+ MY KCG D + VF+EM RD
Sbjct: 497 CSCTPDMDHGKQVHGYILRHG-FDSEISLGNALVTMYSKCGFLDRSLSVFNEMV--ERDT 553
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNM-LSDNVVPNEFTLTSVLSACAHSGALDQGKLV 236
+ W+ +++ Y Q + ++A+ F M +S + P+ T T+VLSAC+HSG +D +
Sbjct: 554 ITWNAIISAYSQHGQGKEAVHCFEAMQISPGIKPDHATFTAVLSACSHSGLVDDATRI 611
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 100/212 (47%), Gaps = 3/212 (1%)
Query: 43 DRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMR 102
D ++ ++SA + I A VFD+ + W A+I G N A + M
Sbjct: 120 DVYSWTTVLSAISRLSDIDYALHVFDKMPKCYVAVWNAIITGCSDNGCEDVAFRLLKDMF 179
Query: 103 STGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHC 162
D T ++L ++ ++G+ VH V++G + V ++L+ MYF CG
Sbjct: 180 RMNVRGDNYTFATMLSLCPLSEGLDYGRHVHSVVVKSGFLDWTSVV-NSLITMYFNCGCV 238
Query: 163 DDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLS 222
D KVF+EM R+ V ++ ++ G+V +F+DA +F +M +V +E T SVLS
Sbjct: 239 VDGYKVFEEMEGGVRNHVTYNAMIDGFVSVERFEDAFLMFRDMHRGSVCLSEVTFVSVLS 298
Query: 223 ACA--HSGALDQGKLVHQYIECKKVSLNSVEL 252
+C G QG + +C ++N+ +
Sbjct: 299 SCCSLRVGCQAQGLAIKMGFDCGYTAVNNATM 330
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 130/265 (49%), Gaps = 22/265 (8%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVED---PFMIYAQIFKLGFDLDRFAGNALISAFANS 57
M + V D +TF +L + P+ E +++ + K GF N+LI+ + N
Sbjct: 178 MFRMNVRGDNYTFATMLSLC--PLSEGLDYGRHVHSVVVKSGFLDWTSVVNSLITMYFNC 235
Query: 58 GFIGSACQVFDE--SSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVS 115
G + +VF+E V++ + + A+I+G+V + +A F M + +T VS
Sbjct: 236 GCVVDGYKVFEEMEGGVRNHVTYNAMIDGFVSVERFEDAFLMFRDMHRGSVCLSEVTFVS 295
Query: 116 VLRAAAMAGDDNFGKWVHGFYVQAGRVQLD-GY--VWSALMDMYFKCGHCDDACKVFDEM 172
VL + G G ++ G D GY V +A M MY G ++A VF+ M
Sbjct: 296 VLSSCCSL---RVGCQAQGLAIKMG---FDCGYTAVNNATMTMYSFFGKVNEARSVFEIM 349
Query: 173 PYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQ 232
S RD+V W+V+V+ + Q N +DAI + M + + P+ FT S+LSA S +L
Sbjct: 350 EES-RDLVSWNVMVSMFFQENINEDAILTYIKMRREGIEPDAFTYGSLLSA---SDSLQM 405
Query: 233 GKLVHQYIECKKVSLNSVELGTALV 257
+++H + CK LN VE+ AL+
Sbjct: 406 VEMIHSVL-CKN-GLNKVEVLNALI 428
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 98/197 (49%), Gaps = 16/197 (8%)
Query: 6 VEPDQHTFPLLLKMFS-KPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSAC 64
++P+ ++ L L + S P ++ ++ I + GFD + GNAL++ ++ GF+ +
Sbjct: 483 LKPNAYSLSLALSICSCTPDMDHGKQVHGYILRHGFDSEISLGNALVTMYSKCGFLDRSL 542
Query: 65 QVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMR-STGTGVDALTVVSVLRAAAMA 123
VF+E +D I W A+I+ Y ++ EA+ CF M+ S G D T +VL A + +
Sbjct: 543 SVFNEMVERDTITWNAIISAYSQHGQGKEAVHCFEAMQISPGIKPDHATFTAVLSACSHS 602
Query: 124 G--DDNFGKWVHGFYVQAGRVQLDGYV-----WSALMDMYFKCGHCDDACKVFDEMPYSY 176
G DD + V + G+V +S ++D+ + G+ D+A +V + +
Sbjct: 603 GLVDD-------ATRIFDIMVNIYGFVPSVDHFSCIVDLLGRSGYLDEAERVVTDGYFGA 655
Query: 177 RDVVCWSVLVAGYVQCN 193
+CWS+ A V N
Sbjct: 656 HPNMCWSLFSACAVHGN 672
>Medtr3g045450.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:14788174-14785760 | 20130731
Length = 804
Score = 125 bits (314), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 92/267 (34%), Positives = 140/267 (52%), Gaps = 17/267 (6%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPFM-IYAQIFKLGFDLDRFAGNALISAFANSGF 59
M + GV+PD HT+P +LK S + D ++ +FK+GFD D F GN L+ + N GF
Sbjct: 125 MVRSGVKPDDHTYPFVLKACSDYLKFDKGREVHGVVFKVGFDKDVFVGNTLLMFYGNCGF 184
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGV---DALTVVSV 116
A VFDE +D ++W +I E+L CF K V D +TVVSV
Sbjct: 185 FVDAMNVFDEMFERDKVSWNTVIGLCSDRGFHEESL-CFFKEMVVAAPVVRPDLVTVVSV 243
Query: 117 LRAAAMAGDDNFGKWVHGFYVQAGRVQLDGY--VWSALMDMYFKCGHCDDAC-KVFDEMP 173
L A + + + VHG+ + G L G+ V +AL+D+Y KCG ++AC KVFDEM
Sbjct: 244 LPVCADSENVVMARIVHGYVFKVG---LSGHVKVGNALVDVYGKCG-SEEACKKVFDEM- 298
Query: 174 YSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
R+ V W+ ++ G+ DA+ F +M++ + PN T++S+L G G
Sbjct: 299 -DERNEVSWNAVITGFSFRGLSMDALDAFRSMINTGMRPNPVTISSMLPVLGELGLFKLG 357
Query: 234 KLVHQYIECKKVSLNS-VELGTALVDM 259
VH Y ++ + S + +G +L+DM
Sbjct: 358 MEVHGY--SLRMGIESDIFIGNSLIDM 382
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 135/260 (51%), Gaps = 6/260 (2%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M G+ P+ T +L + + + + ++ ++G + D F GN+LI +A SG
Sbjct: 329 MINTGMRPNPVTISSMLPVLGELGLFKLGMEVHGYSLRMGIESDIFIGNSLIDMYAKSGS 388
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
A +F++ ++I++W +++ + +N A++ +M++ G + +T +VL A
Sbjct: 389 SRVASTIFNKMGDRNIVSWNSMVANFAQNRHHFAAVELLRQMQAHGENPNNVTFTNVLPA 448
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
A G N GK +H +Q G D ++ +AL DMY KCGH A VF+ S +D
Sbjct: 449 CARLGFLNVGKEIHARIIQTG-CATDLFLSNALTDMYSKCGHLSLARNVFN---VSIKDK 504
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQY 239
V +++L+ GY Q +++ +F M + P+ + ++SACAH ++ QGK +H +
Sbjct: 505 VSYNILIIGYSQTTNSSESLNLFSEMRLSGMTPDIVSFIGIISACAHLSSIKQGKEIHGH 564
Query: 240 IECKKVSLNSVELGTALVDM 259
+ +K+ + +L+D+
Sbjct: 565 L-VRKLFHTHLFAANSLLDL 583
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 122/236 (51%), Gaps = 6/236 (2%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M+ G P+ TF +L ++ + I+A+I + G D F NAL ++ G
Sbjct: 430 MQAHGENPNNVTFTNVLPACARLGFLNVGKEIHARIIQTGCATDLFLSNALTDMYSKCGH 489
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ A VF+ S+KD +++ LI GY + SE+L F +MR +G D ++ + ++ A
Sbjct: 490 LSLARNVFN-VSIKDKVSYNILIIGYSQTTNSSESLNLFSEMRLSGMTPDIVSFIGIISA 548
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
A GK +HG V+ + ++L+D+Y KCG D A KVFD + ++DV
Sbjct: 549 CAHLSSIKQGKEIHGHLVRK-LFHTHLFAANSLLDLYTKCGRIDLATKVFDRI--QHKDV 605
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVP-NEFTLTSVLSACAHSGALDQGK 234
W+ ++ GY +F+ AI +F M D V + + +VLSAC+H G +++G
Sbjct: 606 ASWNTMILGYGMRGEFETAINLFEAMKEDGGVEYDSVSYIAVLSACSHGGLIEKGN 661
Score = 110 bits (276), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 117/230 (50%), Gaps = 4/230 (1%)
Query: 30 MIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKND 89
+++ +FK+G GNAL+ + G + +VFDE ++ ++W A+I G+
Sbjct: 258 IVHGYVFKVGLSGHVKVGNALVDVYGKCGSEEACKKVFDEMDERNEVSWNAVITGFSFRG 317
Query: 90 LPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVW 149
L +AL F M +TG + +T+ S+L G G VHG+ ++ G ++ D ++
Sbjct: 318 LSMDALDAFRSMINTGMRPNPVTISSMLPVLGELGLFKLGMEVHGYSLRMG-IESDIFIG 376
Query: 150 SALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDN 209
++L+DMY K G A +F++M R++V W+ +VA + Q A+ + M +
Sbjct: 377 NSLIDMYAKSGSSRVASTIFNKM--GDRNIVSWNSMVANFAQNRHHFAAVELLRQMQAHG 434
Query: 210 VVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
PN T T+VL ACA G L+ GK +H I + + L AL DM
Sbjct: 435 ENPNNVTFTNVLPACARLGFLNVGKEIHARI-IQTGCATDLFLSNALTDM 483
>Medtr1g059720.1 | organelle transcript processing protein, putative
| HC | chr1:25973337-25971195 | 20130731
Length = 574
Score = 125 bits (313), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 75/230 (32%), Positives = 123/230 (53%), Gaps = 5/230 (2%)
Query: 5 GVEPDQHTFPLLLKM-FSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSA 63
+ PD +T P +++ + ++ MI+ + K G LD F L+ +A I A
Sbjct: 96 NITPDNYTLPFVIRACRDRKDIQMGRMIHDVVLKYGLVLDHFVCATLVDMYAKCAVIEDA 155
Query: 64 CQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMA 123
++FD KD++ WT +I Y D E+L F ++R G D + +V+V+ A A
Sbjct: 156 RKLFDVMVSKDLVTWTVMIGCYADYD-AYESLVLFDRLREEGFVSDKVAMVTVVNACAKL 214
Query: 124 GDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWS 183
G + ++V+ Y+ + LD + +A++DMY KCG D A +VFD M ++V+ WS
Sbjct: 215 GAMHRARFVNE-YICGNGLSLDVILGTAMIDMYAKCGCVDSAREVFDRM--KEKNVISWS 271
Query: 184 VLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
++A Y K ++A+ +F MLS + PN T S+L AC+HSG D+G
Sbjct: 272 AMIAAYGYHGKGKEALDLFHMMLSCGISPNRITFVSLLYACSHSGLTDEG 321
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 111/213 (52%), Gaps = 5/213 (2%)
Query: 47 GNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGT 106
N L+ + I A +FDE +D W+ ++ G+ K + F ++
Sbjct: 38 ANKLLHFYVQHKAINDAYYLFDEMPTRDPTTWSIMVGGFSKLGDYNNCYATFREILRCNI 97
Query: 107 GVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDAC 166
D T+ V+RA D G+ +H ++ G V LD +V + L+DMY KC +DA
Sbjct: 98 TPDNYTLPFVIRACRDRKDIQMGRMIHDVVLKYGLV-LDHFVCATLVDMYAKCAVIEDAR 156
Query: 167 KVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAH 226
K+FD M +D+V W+V++ Y + ++ + +F + + V ++ + +V++ACA
Sbjct: 157 KLFDVM--VSKDLVTWTVMIGCYADYDAYESLV-LFDRLREEGFVSDKVAMVTVVNACAK 213
Query: 227 SGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
GA+ + + V++YI +SL+ + LGTA++DM
Sbjct: 214 LGAMHRARFVNEYICGNGLSLDVI-LGTAMIDM 245
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 74/150 (49%), Gaps = 1/150 (0%)
Query: 39 GFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCF 98
G LD G A+I +A G + SA +VFD K++I+W+A+I Y + EAL F
Sbjct: 231 GLSLDVILGTAMIDMYAKCGCVDSAREVFDRMKEKNVISWSAMIAAYGYHGKGKEALDLF 290
Query: 99 VKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFK 158
M S G + +T VS+L A + +G + G + V+ D ++ ++D+ +
Sbjct: 291 HMMLSCGISPNRITFVSLLYACSHSGLTDEGLHFFDSMWRDYGVRPDVKHYTCVVDLLGR 350
Query: 159 CGHCDDACKVFDEMPYSYRDVVCWSVLVAG 188
G D+A K+ + M +D WS L+
Sbjct: 351 AGRLDEALKLIETMNVE-KDERLWSALLGA 379
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 3/112 (2%)
Query: 148 VWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLS 207
V + L+ Y + +DA +FDEMP RD WS++V G+ + + + F +L
Sbjct: 37 VANKLLHFYVQHKAINDAYYLFDEMPT--RDPTTWSIMVGGFSKLGDYNNCYATFREILR 94
Query: 208 DNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
N+ P+ +TL V+ AC + G+++H + + L+ T LVDM
Sbjct: 95 CNITPDNYTLPFVIRACRDRKDIQMGRMIHDVVLKYGLVLDHFVCAT-LVDM 145
>Medtr7g417770.1 | PPR containing plant-like protein | HC |
chr7:5697167-5694522 | 20130731
Length = 881
Score = 125 bits (313), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 125/246 (50%), Gaps = 10/246 (4%)
Query: 1 MRQKGVEPDQHTFPLLLKMFS-KPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M + +EPD +TF ++K + K + ++ ++ K G LD F G+A+I + G
Sbjct: 464 MLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGM 523
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ A ++ + + ++W ++I+G+ AL F +M G D T +VL
Sbjct: 524 LVEAEKIHERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYATVLDI 583
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQL--DGYVWSALMDMYFKCGHCDDACKVFDEMPYSYR 177
A GK +HG Q ++QL D Y+ S ++DMY KCG+ D+ +F++ P R
Sbjct: 584 CANLATVELGKQIHG---QILKLQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAP--KR 638
Query: 178 DVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVH 237
D V WS ++ Y +DAI++F M NV PN SVL ACAH G +D+G +H
Sbjct: 639 DYVTWSAMICAYAYHGLGEDAIKLFEEMQLQNVKPNHTIFISVLRACAHMGFVDKG--LH 696
Query: 238 QYIECK 243
+ E +
Sbjct: 697 YFREMR 702
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 123/224 (54%), Gaps = 6/224 (2%)
Query: 37 KLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALK 96
K G D + N ++ +A G + AC +FD+ +KD ++W A+I + +N+ E L
Sbjct: 400 KCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLA 459
Query: 97 CFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMY 156
FV M + D T SV++A A N+G VHG +++G + LD +V SA++DMY
Sbjct: 460 LFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSG-MGLDWFVGSAIIDMY 518
Query: 157 FKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFT 216
KCG +A K+ + + R V W+ +++G+ + ++A+ F ML V+P+ FT
Sbjct: 519 CKCGMLVEAEKIHERL--EERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFT 576
Query: 217 LTSVLSACAHSGALDQGKLVHQYIECKKVSLNS-VELGTALVDM 259
+VL CA+ ++ GK +H I K+ L+S V + + +VDM
Sbjct: 577 YATVLDICANLATVELGKQIHGQI--LKLQLHSDVYIASTIVDM 618
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 112/217 (51%), Gaps = 4/217 (1%)
Query: 43 DRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMR 102
D + N +I +A G + A +FD +D+++W ++++ Y++N ++++ F KMR
Sbjct: 103 DVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIFTKMR 162
Query: 103 STGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHC 162
D T VL+A D G VH +Q G D +AL+DMY C
Sbjct: 163 LLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMG-FDSDVVTGTALVDMYSTCKKL 221
Query: 163 DDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLS 222
D A +F EMP R+ VCWS ++AGYV+ ++F + ++++ ML + + ++ T S
Sbjct: 222 DHAFNIFCEMP--ERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAFR 279
Query: 223 ACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
+CA A + G +H Y +++ +GTA +DM
Sbjct: 280 SCAGLSAFELGTQLHAYALKTNFGYDNI-VGTATLDM 315
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 116/240 (48%), Gaps = 8/240 (3%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVED---PFMIYAQIFKLGFDLDRFAGNALISAFANS 57
MR ++ D TF ++LK + +ED ++ ++GFD D G AL+ ++
Sbjct: 161 MRLLEIQHDYATFAVVLKACTG--IEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTC 218
Query: 58 GFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVL 117
+ A +F E ++ + W+A+I GYV+ND +E LK + M G GV T S
Sbjct: 219 KKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAF 278
Query: 118 RAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYR 177
R+ A G +H + ++ D V +A +DMY KC DA KVF+ P R
Sbjct: 279 RSCAGLSAFELGTQLHAYALKTN-FGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTR 337
Query: 178 DVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVH 237
+ L+ GY + ++ +A+ +F ++ + +E +L+ L+AC+ +G +H
Sbjct: 338 Q--SHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLH 395
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 115/229 (50%), Gaps = 4/229 (1%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
++A K F D G A + +A + A +VF+ + ALI GY + D
Sbjct: 293 LHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQDQ 352
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
EAL+ F ++ + D +++ L A + G +HG V+ G + + V +
Sbjct: 353 VLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLHGLAVKCG-LDFNICVAN 411
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV 210
++DMY KCG +AC +FD+M +D V W+ ++A + Q ++ + +F +ML +
Sbjct: 412 TILDMYAKCGALMEACLIFDDM--EIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTM 469
Query: 211 VPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
P+++T SV+ ACA AL+ G VH + + L+ +G+A++DM
Sbjct: 470 EPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWF-VGSAIIDM 517
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 93/190 (48%), Gaps = 6/190 (3%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M Q GV PD T+ +L + + VE I+ QI KL D + + ++ ++ G
Sbjct: 565 MLQVGVIPDNFTYATVLDICANLATVELGKQIHGQILKLQLHSDVYIASTIVDMYSKCGN 624
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ + +F+++ +D + W+A+I Y + L +A+K F +M+ + +SVLRA
Sbjct: 625 MQDSRIMFEKAPKRDYVTWSAMICAYAYHGLGEDAIKLFEEMQLQNVKPNHTIFISVLRA 684
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYV--WSALMDMYFKCGHCDDACKVFDEMPYSYR 177
A G K +H F LD + +S ++D+ + G ++A ++ + MP+
Sbjct: 685 CAHMG--FVDKGLHYFREMRSHYGLDPQMEHYSCMVDLLGRSGQVNEALELIESMPFEAD 742
Query: 178 DVVCWSVLVA 187
DV+ W L+
Sbjct: 743 DVI-WRTLLG 751
>Medtr7g017700.1 | PPR containing plant-like protein | HC |
chr7:5672185-5669078 | 20130731
Length = 881
Score = 125 bits (313), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 125/246 (50%), Gaps = 10/246 (4%)
Query: 1 MRQKGVEPDQHTFPLLLKMFS-KPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M + +EPD +TF ++K + K + ++ ++ K G LD F G+A+I + G
Sbjct: 464 MLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGM 523
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ A ++ + + ++W ++I+G+ AL F +M G D T +VL
Sbjct: 524 LVEAEKIHERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYATVLDI 583
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQL--DGYVWSALMDMYFKCGHCDDACKVFDEMPYSYR 177
A GK +HG Q ++QL D Y+ S ++DMY KCG+ D+ +F++ P R
Sbjct: 584 CANLATVELGKQIHG---QILKLQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAP--KR 638
Query: 178 DVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVH 237
D V WS ++ Y +DAI++F M NV PN SVL ACAH G +D+G +H
Sbjct: 639 DYVTWSAMICAYAYHGLGEDAIKLFEEMQLQNVKPNHTIFISVLRACAHMGFVDKG--LH 696
Query: 238 QYIECK 243
+ E +
Sbjct: 697 YFREMR 702
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 123/224 (54%), Gaps = 6/224 (2%)
Query: 37 KLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALK 96
K G D + N ++ +A G + AC +FD+ +KD ++W A+I + +N+ E L
Sbjct: 400 KCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLA 459
Query: 97 CFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMY 156
FV M + D T SV++A A N+G VHG +++G + LD +V SA++DMY
Sbjct: 460 LFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSG-MGLDWFVGSAIIDMY 518
Query: 157 FKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFT 216
KCG +A K+ + + R V W+ +++G+ + ++A+ F ML V+P+ FT
Sbjct: 519 CKCGMLVEAEKIHERL--EERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFT 576
Query: 217 LTSVLSACAHSGALDQGKLVHQYIECKKVSLNS-VELGTALVDM 259
+VL CA+ ++ GK +H I K+ L+S V + + +VDM
Sbjct: 577 YATVLDICANLATVELGKQIHGQI--LKLQLHSDVYIASTIVDM 618
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 112/217 (51%), Gaps = 4/217 (1%)
Query: 43 DRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMR 102
D + N +I +A G + A +FD +D+++W ++++ Y++N ++++ F KMR
Sbjct: 103 DVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIFTKMR 162
Query: 103 STGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHC 162
D T VL+A D G VH +Q G D +AL+DMY C
Sbjct: 163 LLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMG-FDSDVVTGTALVDMYSTCKKL 221
Query: 163 DDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLS 222
D A +F EMP R+ VCWS ++AGYV+ ++F + ++++ ML + + ++ T S
Sbjct: 222 DHAFNIFCEMP--ERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAFR 279
Query: 223 ACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
+CA A + G +H Y +++ +GTA +DM
Sbjct: 280 SCAGLSAFELGTQLHAYALKTNFGYDNI-VGTATLDM 315
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 116/240 (48%), Gaps = 8/240 (3%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVED---PFMIYAQIFKLGFDLDRFAGNALISAFANS 57
MR ++ D TF ++LK + +ED ++ ++GFD D G AL+ ++
Sbjct: 161 MRLLEIQHDYATFAVVLKACTG--IEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTC 218
Query: 58 GFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVL 117
+ A +F E ++ + W+A+I GYV+ND +E LK + M G GV T S
Sbjct: 219 KKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAF 278
Query: 118 RAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYR 177
R+ A G +H + ++ D V +A +DMY KC DA KVF+ P R
Sbjct: 279 RSCAGLSAFELGTQLHAYALKTN-FGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTR 337
Query: 178 DVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVH 237
+ L+ GY + ++ +A+ +F ++ + +E +L+ L+AC+ +G +H
Sbjct: 338 Q--SHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLH 395
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 115/229 (50%), Gaps = 4/229 (1%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
++A K F D G A + +A + A +VF+ + ALI GY + D
Sbjct: 293 LHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQDQ 352
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
EAL+ F ++ + D +++ L A + G +HG V+ G + + V +
Sbjct: 353 VLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLHGLAVKCG-LDFNICVAN 411
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV 210
++DMY KCG +AC +FD+M +D V W+ ++A + Q ++ + +F +ML +
Sbjct: 412 TILDMYAKCGALMEACLIFDDM--EIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTM 469
Query: 211 VPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
P+++T SV+ ACA AL+ G VH + + L+ +G+A++DM
Sbjct: 470 EPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWF-VGSAIIDM 517
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 93/190 (48%), Gaps = 6/190 (3%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M Q GV PD T+ +L + + VE I+ QI KL D + + ++ ++ G
Sbjct: 565 MLQVGVIPDNFTYATVLDICANLATVELGKQIHGQILKLQLHSDVYIASTIVDMYSKCGN 624
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ + +F+++ +D + W+A+I Y + L +A+K F +M+ + +SVLRA
Sbjct: 625 MQDSRIMFEKAPKRDYVTWSAMICAYAYHGLGEDAIKLFEEMQLQNVKPNHTIFISVLRA 684
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYV--WSALMDMYFKCGHCDDACKVFDEMPYSYR 177
A G K +H F LD + +S ++D+ + G ++A ++ + MP+
Sbjct: 685 CAHMG--FVDKGLHYFREMRSHYGLDPQMEHYSCMVDLLGRSGQVNEALELIESMPFEAD 742
Query: 178 DVVCWSVLVA 187
DV+ W L+
Sbjct: 743 DVI-WRTLLG 751
>Medtr7g108530.1 | PPR containing plant-like protein | HC |
chr7:44212645-44210679 | 20130731
Length = 467
Score = 125 bits (313), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 128/238 (53%), Gaps = 6/238 (2%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKP--VVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSG 58
M + + P+ TFP L K S V+ +Y + KLG+ D + N+L+ +A+ G
Sbjct: 100 MHKNSILPNNFTFPFLFKSLSDSHDFVQSQ-CVYTHVIKLGYVNDIYVNNSLLDVYASYG 158
Query: 59 FIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLR 118
+ Q+FDE +D+++WT +I GY ++AL F +M+ G + +T+V+ L
Sbjct: 159 CLELCRQLFDEMPQRDVVSWTVMIMGYRNGGKYNDALLVFEQMQYGGVVPNRVTMVNALS 218
Query: 119 AAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRD 178
A A + G W+ + G +LD + +AL+DMY KCG ++ KVF +M ++
Sbjct: 219 ACASSCAIEMGVWIDDMVRRNGW-ELDVILGTALIDMYVKCGRVEEGLKVFCDM--KEKN 275
Query: 179 VVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLV 236
V +V++ G ++A+ F M D V +E TL +VLSAC+HSG +++G+ +
Sbjct: 276 VFTLNVVIKGLALAKSVEEALLWFNRMELDGVRADEVTLVTVLSACSHSGLVEKGRFI 333
>Medtr7g105540.1 | PPR containing plant-like protein | HC |
chr7:42802997-42805935 | 20130731
Length = 596
Score = 124 bits (312), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 113/187 (60%), Gaps = 4/187 (2%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTG 107
++ +A +G + S+ +F++++ KD++ W+ALI+GYV+N +EALK F++M S
Sbjct: 247 TTMVDGYAKAGDMESSRFLFEQAAEKDVVTWSALISGYVQNGEANEALKVFLEMESMNVI 306
Query: 108 VDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDG-YVWSALMDMYFKCGHCDDAC 166
D +V ++ AA+ GD + V YV + L +V SAL+DM KCG+ + A
Sbjct: 307 PDEFVLVGLMSAASQLGDLKLAQRVDS-YVGNNSIDLQKDHVISALVDMNAKCGNMERAL 365
Query: 167 KVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAH 226
K+F EMP RD+V + ++ G+ +DA+ +F ML + +VP+E T VL+AC+H
Sbjct: 366 KLFQEMPE--RDLVSYCSMIHGFSIHGHGEDAVNLFNRMLMEGIVPDEAAFTIVLTACSH 423
Query: 227 SGALDQG 233
SG +D+G
Sbjct: 424 SGLIDKG 430
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 135/265 (50%), Gaps = 22/265 (8%)
Query: 1 MRQKGVEPDQHTFPLLLKMFS---KPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANS 57
M+ +G PD +T+P ++K S K +V ++ +F+ G D D F G LI +
Sbjct: 106 MKAEGAVPDSYTYPSVIKACSGTCKVLVGKS--VHGSVFRCGLDQDLFMGTTLIDMYGKC 163
Query: 58 GFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVS-- 115
G I A +VF+E + +++++WTA++ GYV +A K F G+ V S
Sbjct: 164 GQISDARKVFNELTERNVVSWTAMVVGYVTAGDVVKAKKVF-------DGMPLRNVASWN 216
Query: 116 -VLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPY 174
++R GD + + V + V ++ ++D Y K G + + +F++
Sbjct: 217 AMIRGFVKVGDLSSARGVFDSMPEKNVVS-----FTTMVDGYAKAGDMESSRFLFEQA-- 269
Query: 175 SYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGK 234
+ +DVV WS L++GYVQ + +A++VF M S NV+P+EF L ++SA + G L +
Sbjct: 270 AEKDVVTWSALISGYVQNGEANEALKVFLEMESMNVIPDEFVLVGLMSAASQLGDLKLAQ 329
Query: 235 LVHQYIECKKVSLNSVELGTALVDM 259
V Y+ + L + +ALVDM
Sbjct: 330 RVDSYVGNNSIDLQKDHVISALVDM 354
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 92/183 (50%), Gaps = 7/183 (3%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGS---ACQVFDESSVKDIIAWTALINGYVK 87
++A I + G + D+ + IS AN+ I + + VF+ W I + +
Sbjct: 34 VHASIIQRGLEQDQVLISNFIS-LANTLSISTRSYSTAVFNRVLNPSTFLWNTFIRTHCQ 92
Query: 88 NDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGY 147
+ S+ + F++M++ G D+ T SV++A + GK VHG + G Q D +
Sbjct: 93 SSFFSDTISAFIRMKAEGAVPDSYTYPSVIKACSGTCKVLVGKSVHGSVFRCGLDQ-DLF 151
Query: 148 VWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLS 207
+ + L+DMY KCG DA KVF+E+ + R+VV W+ +V GYV A +VF M
Sbjct: 152 MGTTLIDMYGKCGQISDARKVFNEL--TERNVVSWTAMVVGYVTAGDVVKAKKVFDGMPL 209
Query: 208 DNV 210
NV
Sbjct: 210 RNV 212
>Medtr7g037430.1 | pentatricopeptide (PPR) repeat protein | LC |
chr7:13795126-13792268 | 20130731
Length = 952
Score = 124 bits (312), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 85/261 (32%), Positives = 130/261 (49%), Gaps = 9/261 (3%)
Query: 2 RQKGVEPDQHTFPLLLKMFSKPVVEDPFMI---YAQIFKLGFDLDRFAGNALISAFANSG 58
R +G++PD+ F + K + D + + + G D GNA I A+
Sbjct: 32 RARGIKPDKPVFMAVAKACAAS--RDALKVKQFHDDATRCGVMSDVSIGNAFIHAYGKCK 89
Query: 59 FIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLR 118
+ A +VFD+ +D++ W +L YV P + L F KM + LTV S+L
Sbjct: 90 CVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVKANPLTVSSILP 149
Query: 119 AAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRD 178
+ D GK +HGF V+ G V+ D +V SA ++ Y KC +A VFD MP +RD
Sbjct: 150 GCSDLQDLKSGKEIHGFVVRHGMVE-DVFVSSAFVNFYAKCLCVREAQTVFDLMP--HRD 206
Query: 179 VVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQ 238
VV W+ L + YV C Q + VF M+ D V P+ T++ +LSAC+ L GK +H
Sbjct: 207 VVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLKSGKAIHG 266
Query: 239 YIECKKVSLNSVELGTALVDM 259
+ K + +V + ALV++
Sbjct: 267 F-ALKHGMVENVFVSNALVNL 286
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/236 (32%), Positives = 121/236 (51%), Gaps = 4/236 (1%)
Query: 5 GVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSA 63
GV+PD T +L S ++ I+ K G + F NAL++ + + + A
Sbjct: 237 GVKPDPVTVSCILSACSDLQDLKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREA 296
Query: 64 CQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMA 123
VFD +++I W +L + YV P + L F +M G D + + S+L A +
Sbjct: 297 QAVFDLMPHRNVITWNSLASCYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQL 356
Query: 124 GDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWS 183
D GK +HGF V+ G V+ D +V +AL+++Y C +A VFD MP +R+VV W+
Sbjct: 357 KDLKSGKTIHGFAVKHGMVE-DVFVCTALVNLYANCLCVREAQTVFDLMP--HRNVVTWN 413
Query: 184 VLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQY 239
L + YV C Q + VF M+ + V P+ T+ S+L AC+ L GK++H +
Sbjct: 414 SLSSCYVNCGFPQKGLNVFREMVLNGVKPDLVTMLSILHACSDLQDLKSGKVIHGF 469
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 127/274 (46%), Gaps = 35/274 (12%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M GV+PD +L S+ ++ I+ K G D F AL++ +AN
Sbjct: 334 MGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVCTALVNLYANCLC 393
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ A VFD ++++ W +L + YV P + L F +M G D +T++S+L A
Sbjct: 394 VREAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMVLNGVKPDLVTMLSILHA 453
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYS---- 175
+ D GK +HGF V+ G V+ D +V +AL+ +Y KC +A VFD +P+
Sbjct: 454 CSDLQDLKSGKVIHGFAVRHGMVE-DVFVCNALLSLYAKCVCVREAQVVFDLIPHREVAS 512
Query: 176 -----------------------------YRDVVCWSVLVAGYVQCNKFQDAIRVFWNML 206
D + WSV++ G V+ ++ ++A+ +F M
Sbjct: 513 WNGILTAYFTNKEYEKGLYMFSQMNRDEVKADEITWSVVIGGCVKNSRIEEAMEIFRKMQ 572
Query: 207 SDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYI 240
+ P+E T+ S+L AC+ S L GK +H Y+
Sbjct: 573 TMGFKPDETTIYSILRACSLSECLRMGKEIHCYV 606
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 96/186 (51%), Gaps = 3/186 (1%)
Query: 74 DIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVH 133
D I W+ +I G VKN EA++ F KM++ G D T+ S+LRA +++ GK +H
Sbjct: 544 DEITWSVVIGGCVKNSRIEEAMEIFRKMQTMGFKPDETTIYSILRACSLSECLRMGKEIH 603
Query: 134 GFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCN 193
+ + + D +AL+DMY KCG + VFD MP +DV W+ ++
Sbjct: 604 CYVFRHWK-DWDLARTNALVDMYAKCGGLSLSRNVFDMMP--IKDVFSWNTMIFANGMHG 660
Query: 194 KFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELG 253
++A+ +F ML V P+ T T VLSAC+HS +++G + + + E
Sbjct: 661 NGKEALSLFEKMLLSMVKPDSATFTCVLSACSHSMLVEEGVQIFNSMSRDHLVEPEAEHY 720
Query: 254 TALVDM 259
T +VD+
Sbjct: 721 TCVVDI 726
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 77/155 (49%), Gaps = 3/155 (1%)
Query: 86 VKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLD 145
+ + LP+EA+K + R+ G D ++V +A A + D K H + G V D
Sbjct: 16 IPHGLPNEAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCG-VMSD 74
Query: 146 GYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNM 205
+ +A + Y KC + A +VFD++ RDVV W+ L A YV C Q + VF M
Sbjct: 75 VSIGNAFIHAYGKCKCVEGARRVFDDL--VARDVVTWNSLSACYVNCGFPQQGLNVFRKM 132
Query: 206 LSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYI 240
+ V N T++S+L C+ L GK +H ++
Sbjct: 133 GLNKVKANPLTVSSILPGCSDLQDLKSGKEIHGFV 167
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 83/191 (43%), Gaps = 6/191 (3%)
Query: 1 MRQKGVEPDQHTFPLLLKMFS-KPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M+ G +PD+ T +L+ S + I+ +F+ D D NAL+ +A G
Sbjct: 571 MQTMGFKPDETTIYSILRACSLSECLRMGKEIHCYVFRHWKDWDLARTNALVDMYAKCGG 630
Query: 60 IGSACQVFDESSVKDIIAWTALI--NGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVL 117
+ + VFD +KD+ +W +I NG N EAL F KM + D+ T VL
Sbjct: 631 LSLSRNVFDMMPIKDVFSWNTMIFANGMHGNG--KEALSLFEKMLLSMVKPDSATFTCVL 688
Query: 118 RAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYR 177
A + + G + + V+ + ++ ++D+Y + G ++A MP
Sbjct: 689 SACSHSMLVEEGVQIFNSMSRDHLVEPEAEHYTCVVDIYSRAGCLEEAYGFIQRMPME-P 747
Query: 178 DVVCWSVLVAG 188
+ W +AG
Sbjct: 748 TAIAWKAFLAG 758
>Medtr3g089880.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:40854327-40856914 | 20130731
Length = 616
Score = 124 bits (312), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 87/281 (30%), Positives = 136/281 (48%), Gaps = 38/281 (13%)
Query: 9 DQHTFPLLLKMF-SKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVF 67
D P LLK S P + ++A+ K G D+D F G A+++A+A G + A +VF
Sbjct: 50 DPTVIPQLLKACDSHPFLPYVKSLHAESIKAGSDVDVFIGTAIVAAYAKCGVVCDARKVF 109
Query: 68 DESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDN 127
D ++++ W A+I GY++N AL F +M G ++ ++ A GD
Sbjct: 110 DLMPERNVVTWNAMIGGYLRNGDAKSALLAFEEM----PGKTRVSWSQMIGGFARNGDTL 165
Query: 128 FGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMP----YSYRDVVC-- 181
+ F+ + D +W+ ++D Y K G +DA +VF+ MP + + +VC
Sbjct: 166 TAR---KFFDKVPYELKDVVIWTVMVDGYAKKGEMEDAREVFELMPERNYFVWSSMVCGY 222
Query: 182 -----------------------WSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLT 218
W+ ++AGYVQ + A+ F M D P+EFT+
Sbjct: 223 CKKGDVMEAEAIFRRIPVRNLEIWNSMIAGYVQNGCGEKALEAFGEMGVDGFEPDEFTVV 282
Query: 219 SVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
SVLSACA G LD GK +H IECK +++N L + L+DM
Sbjct: 283 SVLSACAQLGDLDAGKQMHHMIECKGIAVNQFVL-SGLIDM 322
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 110/208 (52%), Gaps = 3/208 (1%)
Query: 34 QIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSE 93
++F+L + + F ++++ + G + A +F V+++ W ++I GYV+N +
Sbjct: 202 EVFELMPERNYFVWSSMVCGYCKKGDVMEAEAIFRRIPVRNLEIWNSMIAGYVQNGCGEK 261
Query: 94 ALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALM 153
AL+ F +M G D TVVSVL A A GD + GK +H ++ + ++ +V S L+
Sbjct: 262 ALEAFGEMGVDGFEPDEFTVVSVLSACAQLGDLDAGKQMH-HMIECKGIAVNQFVLSGLI 320
Query: 154 DMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPN 213
DMY KCG +A VF+ + R+V CW+ ++AG+ + + + M N+ +
Sbjct: 321 DMYAKCGDLVNARLVFESC--NERNVFCWNAMIAGFAVNGQCNEVLEYLDRMQESNIRLD 378
Query: 214 EFTLTSVLSACAHSGALDQGKLVHQYIE 241
T +VLSACAH G + + V +E
Sbjct: 379 AVTFITVLSACAHGGLMSEALEVISKME 406
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 92/190 (48%), Gaps = 2/190 (1%)
Query: 5 GVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSA 63
G EPD+ T +L ++ ++ ++ I G +++F + LI +A G + +A
Sbjct: 273 GFEPDEFTVVSVLSACAQLGDLDAGKQMHHMIECKGIAVNQFVLSGLIDMYAKCGDLVNA 332
Query: 64 CQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMA 123
VF+ + +++ W A+I G+ N +E L+ +M+ + +DA+T ++VL A A
Sbjct: 333 RLVFESCNERNVFCWNAMIAGFAVNGQCNEVLEYLDRMQESNIRLDAVTFITVLSACAHG 392
Query: 124 GDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWS 183
G + V + G +++ + ++D+ + G +A ++ MP + V +
Sbjct: 393 GLMSEALEVISKMEEYG-IEMGIRHYGCMVDLLGRAGKLKEAYELIKRMPMKPNETVLGA 451
Query: 184 VLVAGYVQCN 193
++ A ++ +
Sbjct: 452 MIGACWIHSD 461
>Medtr7g005870.1 | PPR containing plant-like protein | HC |
chr7:378521-375734 | 20130731
Length = 601
Score = 124 bits (312), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 116/196 (59%), Gaps = 8/196 (4%)
Query: 49 ALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMR-STGTG 107
+++ ++ G + A +FD K++++W A+I GY +N +ALK F +MR +
Sbjct: 256 SMVHGYSEDGDVDEARFLFDCMPEKNVLSWNAMIRGYCQNGRSHDALKLFCEMRGNVDVE 315
Query: 108 VDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDG--YVWSALMDMYFKCGHCDDA 165
++ +TVVSVL A A + G WVHGF VQ R QLDG +V +AL+DMY KCG A
Sbjct: 316 MNEVTVVSVLPAVADLSALDLGGWVHGF-VQ--RNQLDGSVHVCNALVDMYAKCGEIGKA 372
Query: 166 CKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACA 225
VF+EM + +D W+ L+ GY ++A+ VF ML + PN+ T+TSVLSAC
Sbjct: 373 KLVFEEM--TEKDTGSWNALINGYGVNGCAKEALEVFAMMLREGFEPNQITMTSVLSACN 430
Query: 226 HSGALDQGKLVHQYIE 241
H G +++G+ + +E
Sbjct: 431 HCGLVEEGRRCFEAME 446
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 81/256 (31%), Positives = 129/256 (50%), Gaps = 16/256 (6%)
Query: 7 EPDQHTFPLLLKMFS-KPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQ 65
P +TF L+LK S F I+ + K F LD + G +L+ + G +G A +
Sbjct: 120 RPSSYTFTLILKGCSVSDAKRQGFQIHGVVLKNWFCLDLYVGTSLVDMYVKFGDVGFARK 179
Query: 66 VFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAM-AG 124
VFDE SV+ +++WTA+I GY + EA K F M + + ++ M
Sbjct: 180 VFDEMSVRSLVSWTAVIVGYARCGDMVEARKLFDGMVDRDVAAFNVMIDGYVKMGRMDLA 239
Query: 125 DDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSV 184
D F K RV+ + W++++ Y + G D+A +FD MP ++V+ W+
Sbjct: 240 RDLFDKM---------RVK-NVISWTSMVHGYSEDGDVDEARFLFDCMP--EKNVLSWNA 287
Query: 185 LVAGYVQCNKFQDAIRVFWNMLSD-NVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECK 243
++ GY Q + DA+++F M + +V NE T+ SVL A A ALD G VH +++
Sbjct: 288 MIRGYCQNGRSHDALKLFCEMRGNVDVEMNEVTVVSVLPAVADLSALDLGGWVHGFVQRN 347
Query: 244 KVSLNSVELGTALVDM 259
++ SV + ALVDM
Sbjct: 348 QLD-GSVHVCNALVDM 362
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 76/154 (49%), Gaps = 7/154 (4%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTG 107
NAL+ +A G IG A VF+E + KD +W ALINGY N EAL+ F M G
Sbjct: 357 NALVDMYAKCGEIGKAKLVFEEMTEKDTGSWNALINGYGVNGCAKEALEVFAMMLREGFE 416
Query: 108 VDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRV-QLDGYVWSALMDMYFKCGHCDDAC 166
+ +T+ SVL A G G+ + G V Q++ Y ++D+ + G D+A
Sbjct: 417 PNQITMTSVLSACNHCGLVEEGRRCFEAMERFGIVPQIEHY--GCMIDLLGRAGRLDEAE 474
Query: 167 KVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIR 200
K+ MPY +++ S L A C F+D R
Sbjct: 475 KLIQAMPYDPNEIILTSFLFA----CCYFEDVSR 504
>Medtr6g032915.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:10235820-10240817 | 20130731
Length = 1144
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 113/203 (55%), Gaps = 3/203 (1%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
I+AQ G+ D GNAL+S +A G + A FD+ KD ++W +L++G+ ++
Sbjct: 609 IHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQIYAKDNVSWNSLVSGFAQSGY 668
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
EAL F +M G +++ T S + AAA + GK +HG + G + V +
Sbjct: 669 FEEALNIFAQMNKAGLEINSFTFGSAVSAAANIANVRIGKQIHGMIRKTG-YDSETEVSN 727
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV 210
AL+ +Y KCG DDA + F EMP ++ + W+ ++ GY Q +A+++F +M +V
Sbjct: 728 ALITLYAKCGTIDDAERHFFEMP--DKNEISWNSMITGYSQHGCGFEALKLFEDMKQLDV 785
Query: 211 VPNEFTLTSVLSACAHSGALDQG 233
+PN T VLSAC+H G +D+G
Sbjct: 786 LPNHVTFVGVLSACSHVGLVDEG 808
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 136/261 (52%), Gaps = 7/261 (2%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVED-PFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M+ +G+ P+Q T+P +LK + D I+ Q+ K GF + + + LI +A G
Sbjct: 477 MQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGK 536
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ A ++F D+++WTA+I GY ++D +EAL F +M+ G D + S + A
Sbjct: 537 LDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISA 596
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
A + G+ +H +G D + +AL+ +Y +CG +A FD++ Y+ +D
Sbjct: 597 CAGIQALDQGRQIHAQSCLSGYSD-DLSIGNALVSLYARCGKVREAYAAFDQI-YA-KDN 653
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQY 239
V W+ LV+G+ Q F++A+ +F M + N FT S +SA A+ + GK +H
Sbjct: 654 VSWNSLVSGFAQSGYFEEALNIFAQMNKAGLEINSFTFGSAVSAAANIANVRIGKQIHGM 713
Query: 240 IECKKVSLNS-VELGTALVDM 259
I +K +S E+ AL+ +
Sbjct: 714 I--RKTGYDSETEVSNALITL 732
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 129/260 (49%), Gaps = 5/260 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M G+ P + F +L +K E ++ + K GF + + NAL++ ++ SG
Sbjct: 275 MHTSGICPTPYIFSSVLSACTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGN 334
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ SA Q+F S +D +++ +LI+G + + AL F KM D +TV S+L A
Sbjct: 335 LSSAEQIFHCMSQRDRVSYNSLISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSA 394
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
A G GK H + ++AG D V +L+D+Y KC A + F + +V
Sbjct: 395 CASVGALPNGKQFHSYAIKAGMTS-DIVVEGSLLDLYVKCSDIKTAHEFF--LACETENV 451
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQY 239
V W+V++ GY Q + + ++F M + +VPN+FT S+L C GA D G+ +H
Sbjct: 452 VLWNVMLVGYGQLDNLNKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQ 511
Query: 240 IECKKVSLNSVELGTALVDM 259
+ N V + + L+DM
Sbjct: 512 VLKTGFQFN-VYVSSVLIDM 530
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/241 (33%), Positives = 123/241 (51%), Gaps = 5/241 (2%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPFM--IYAQIFKLGFDLDRFAGNALISAFANSG 58
M K VE D+ F ++L+ S V F+ I+A+ GF+ F N LI + +G
Sbjct: 173 MLTKNVEFDERIFAVVLRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNG 232
Query: 59 FIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLR 118
F+ SA +VF+ +D ++W A+I+G +N EA+ F +M ++G SVL
Sbjct: 233 FLSSAKKVFENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQMHTSGICPTPYIFSSVLS 292
Query: 119 AAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRD 178
A FGK +HG ++ G + YV +AL+ +Y + G+ A ++F M S RD
Sbjct: 293 ACTKVEFFEFGKQLHGLVLKQG-FSSETYVCNALVTLYSRSGNLSSAEQIFHCM--SQRD 349
Query: 179 VVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQ 238
V ++ L++G Q A+ +F M D P+ T+ S+LSACA GAL GK H
Sbjct: 350 RVSYNSLISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHS 409
Query: 239 Y 239
Y
Sbjct: 410 Y 410
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 107/239 (44%), Gaps = 5/239 (2%)
Query: 1 MRQKGVEPDQHTFPLLLK-MFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M Q GV + TF LL+ + D ++ +I K+GF + LI + G
Sbjct: 72 MEQHGVRANSQTFLWLLEGCLNSRSFYDGLKLHGKILKMGFCDEVVLCERLIDFYLAFGD 131
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ A VFDE ++ + W + N ++ L F +M + D VLR
Sbjct: 132 LNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNVEFDERIFAVVLRG 191
Query: 120 -AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRD 178
+ A F + +H + +G + ++ + L+D+YFK G A KVF+ + RD
Sbjct: 192 CSGNAVSFRFVEQIHAKTITSG-FESSTFICNPLIDLYFKNGFLSSAKKVFENL--KARD 248
Query: 179 VVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVH 237
V W +++G Q ++A+ +F M + + P + +SVLSAC + GK +H
Sbjct: 249 SVSWVAMISGLSQNGYEEEAMLLFCQMHTSGICPTPYIFSSVLSACTKVEFFEFGKQLH 307
>Medtr8g102760.1 | PPR containing plant-like protein | HC |
chr8:43261430-43259561 | 20130731
Length = 447
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/237 (32%), Positives = 122/237 (51%), Gaps = 4/237 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKP-VVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M + GV PD++T P++LK S+ ++ +++ KLG + + + I+ + +G
Sbjct: 88 MLRAGVLPDRYTLPIVLKAVSQSFAIQLGQQVHSYGIKLGLQSNEYCESGFINLYCKAGD 147
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
SA +VFDE+ + +W ALI+G + L +A+ FV M+ G D +T+VSV+ A
Sbjct: 148 FDSAHKVFDENHEPKLGSWNALISGLSQGGLAMDAIVVFVDMKRHGFEPDGITMVSVMSA 207
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS-ALMDMYFKCGHCDDACKVFDEMPYSYRD 178
GD +H + QA + + S +L+DMY KCG D A +VF M R+
Sbjct: 208 CGSIGDLYLALQLHKYVFQAKTNEWTVILMSNSLIDMYGKCGRMDLAYEVFATM--EDRN 265
Query: 179 VVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKL 235
V W+ ++ GY ++A+ F M V PN T VLSAC H G + +G+
Sbjct: 266 VSSWTSMIVGYAMHGHAKEALGCFHCMRESGVKPNYVTFIGVLSACVHGGTVQEGRF 322
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 90/183 (49%), Gaps = 4/183 (2%)
Query: 78 WTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYV 137
W +I Y + + P AL+ +V M G D T+ VL+A + + G+ VH + +
Sbjct: 65 WNNIIRSYTRLESPQNALRIYVSMLRAGVLPDRYTLPIVLKAVSQSFAIQLGQQVHSYGI 124
Query: 138 QAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQD 197
+ G +Q + Y S +++Y K G D A KVFDE + W+ L++G Q D
Sbjct: 125 KLG-LQSNEYCESGFINLYCKAGDFDSAHKVFDENHEP--KLGSWNALISGLSQGGLAMD 181
Query: 198 AIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYI-ECKKVSLNSVELGTAL 256
AI VF +M P+ T+ SV+SAC G L +H+Y+ + K + + +L
Sbjct: 182 AIVVFVDMKRHGFEPDGITMVSVMSACGSIGDLYLALQLHKYVFQAKTNEWTVILMSNSL 241
Query: 257 VDM 259
+DM
Sbjct: 242 IDM 244
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 93/220 (42%), Gaps = 35/220 (15%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPFMIYAQIFKLGFDLDR------FAGNALISAF 54
M++ G EPD T ++ M + + D ++ Q+ K F N+LI +
Sbjct: 189 MKRHGFEPDGIT--MVSVMSACGSIGDLYLAL-QLHKYVFQAKTNEWTVILMSNSLIDMY 245
Query: 55 ANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVV 114
G + A +VF +++ +WT++I GY + EAL CF MR +G + +T +
Sbjct: 246 GKCGRMDLAYEVFATMEDRNVSSWTSMIVGYAMHGHAKEALGCFHCMRESGVKPNYVTFI 305
Query: 115 SVLRAAAMAGDDNFGKWVHGFYVQAGRVQLD------GYV-----WSALMDMYFKCGHCD 163
VL A VHG VQ GR D G + ++D+ + G D
Sbjct: 306 GVLSAC-----------VHGGTVQEGRFYFDMMKNIYGITPQLQHYGCMVDLLGRAGLFD 354
Query: 164 DACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFW 203
DA ++ +EMP VV W L+ C K + W
Sbjct: 355 DARRMVEEMPMKPNSVV-WGCLMGA---CEKHGNVDMAEW 390
>Medtr7g083820.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:32273955-32271537 | 20130731
Length = 672
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/274 (33%), Positives = 146/274 (53%), Gaps = 21/274 (7%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPV-VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
MR+ + P++ TFP +K S + I+ Q F G+ D F +ALI ++ G+
Sbjct: 77 MRKLSLHPNRSTFPCTIKSCSSLYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGY 136
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFV-----------KMRSTGTGV 108
+ A ++FDE +++++WT++I+GYV+N+ EA+ F ++ G GV
Sbjct: 137 LNDARKLFDEIPERNVVSWTSMISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGV 196
Query: 109 DALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDG--YVWSALMDMYFKCGHCDDAC 166
D++ + V+ A A + + VHG V+ G +G V + LMD Y KCG +
Sbjct: 197 DSVLLGCVISACARVCVKSVTECVHGLAVKKG---FEGCLAVGNTLMDAYAKCGEISVSR 253
Query: 167 KVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVP-NEFTLTSVLSACA 225
KVFD M + DV W+ L+A Y Q +A +F +M+ V N TL++VL ACA
Sbjct: 254 KVFDGMEET--DVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACA 311
Query: 226 HSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
HSGAL GK +H + ++ N V +GT++VDM
Sbjct: 312 HSGALQIGKCIHDQVVKMELEDNLV-VGTSIVDM 344
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 75/232 (32%), Positives = 124/232 (53%), Gaps = 8/232 (3%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
++ K GF+ GN L+ A+A G I + +VFD D+ +W +LI Y +N L
Sbjct: 220 VHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGL 279
Query: 91 PSEALKCFVKMRSTG-TGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDG--Y 147
EA F M G +A+T+ +VL A A +G GK +H Q +++L+
Sbjct: 280 SVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHD---QVVKMELEDNLV 336
Query: 148 VWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLS 207
V ++++DMY KCG + A K FD + ++V W+V+VAGY ++A++VF+ M+
Sbjct: 337 VGTSIVDMYCKCGRVEMARKAFDRLKR--KNVKSWTVMVAGYGMHGHGKEAMKVFYEMIR 394
Query: 208 DNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
+ PN T SVL+AC+H+G L +G ++C+ +E + +VD+
Sbjct: 395 CGIKPNYITFVSVLAACSHAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDL 446
>Medtr7g083820.2 | pentatricopeptide (PPR) repeat protein | HC |
chr7:32273955-32271537 | 20130731
Length = 672
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/274 (33%), Positives = 146/274 (53%), Gaps = 21/274 (7%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPV-VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
MR+ + P++ TFP +K S + I+ Q F G+ D F +ALI ++ G+
Sbjct: 77 MRKLSLHPNRSTFPCTIKSCSSLYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGY 136
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFV-----------KMRSTGTGV 108
+ A ++FDE +++++WT++I+GYV+N+ EA+ F ++ G GV
Sbjct: 137 LNDARKLFDEIPERNVVSWTSMISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGV 196
Query: 109 DALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDG--YVWSALMDMYFKCGHCDDAC 166
D++ + V+ A A + + VHG V+ G +G V + LMD Y KCG +
Sbjct: 197 DSVLLGCVISACARVCVKSVTECVHGLAVKKG---FEGCLAVGNTLMDAYAKCGEISVSR 253
Query: 167 KVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVP-NEFTLTSVLSACA 225
KVFD M + DV W+ L+A Y Q +A +F +M+ V N TL++VL ACA
Sbjct: 254 KVFDGMEET--DVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACA 311
Query: 226 HSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
HSGAL GK +H + ++ N V +GT++VDM
Sbjct: 312 HSGALQIGKCIHDQVVKMELEDNLV-VGTSIVDM 344
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 75/232 (32%), Positives = 124/232 (53%), Gaps = 8/232 (3%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
++ K GF+ GN L+ A+A G I + +VFD D+ +W +LI Y +N L
Sbjct: 220 VHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGL 279
Query: 91 PSEALKCFVKMRSTG-TGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDG--Y 147
EA F M G +A+T+ +VL A A +G GK +H Q +++L+
Sbjct: 280 SVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHD---QVVKMELEDNLV 336
Query: 148 VWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLS 207
V ++++DMY KCG + A K FD + ++V W+V+VAGY ++A++VF+ M+
Sbjct: 337 VGTSIVDMYCKCGRVEMARKAFDRLKR--KNVKSWTVMVAGYGMHGHGKEAMKVFYEMIR 394
Query: 208 DNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
+ PN T SVL+AC+H+G L +G ++C+ +E + +VD+
Sbjct: 395 CGIKPNYITFVSVLAACSHAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDL 446
>Medtr5g049780.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:21773208-21775311 | 20130731
Length = 662
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/238 (33%), Positives = 127/238 (53%), Gaps = 9/238 (3%)
Query: 4 KGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDL-DRFAGNALISAFANSGFIG 61
+GV PD +TF + K FS+ V + + LGF++ D F ++ +A G +
Sbjct: 95 EGVLPDAYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFEVSDGFVATGIVDMYAKFGKMK 154
Query: 62 SACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAA 121
A VFD KD++ +TALI GY ++ L EAL+ F M + + T+ SVL +
Sbjct: 155 DARFVFDRVLDKDVVLFTALIVGYNQHGLDGEALEVFEDMVGSRIKPNEYTLASVLVSCG 214
Query: 122 MAGDDNFGKWVHGFYVQAGRVQLDGYVWS--ALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
GD GK +HG V+ G L+ V S +L+ MY KC +D+ KVF+ + Y+
Sbjct: 215 NLGDLVNGKLIHGLVVKYG---LESVVASQTSLLTMYSKCNMVEDSIKVFNSLAYASH-- 269
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVH 237
V W+ + G VQ + + A+ +F M+ ++ PN FTL+S+L AC+ L+ G+ +H
Sbjct: 270 VTWTSFIVGLVQNGREEVALSMFREMMRCSISPNHFTLSSILHACSSLAMLEAGEQIH 327
Score = 114 bits (286), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 108/207 (52%), Gaps = 3/207 (1%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
++ I K G L F G+ LI + I A ++FDE + I+ W ++I+ +V
Sbjct: 23 LHTHILKSG-SLFSFFGHKLIDGYIKCSVITEARKLFDEMPNRHIVTWNSMISSHVSRGK 81
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
EA++ + M G DA T ++ +A + G G+ HG V G DG+V +
Sbjct: 82 TKEAIELYSNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFEVSDGFVAT 141
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV 210
++DMY K G DA VFD + +DVV ++ L+ GY Q +A+ VF +M+ +
Sbjct: 142 GIVDMYAKFGKMKDARFVFDRVL--DKDVVLFTALIVGYNQHGLDGEALEVFEDMVGSRI 199
Query: 211 VPNEFTLTSVLSACAHSGALDQGKLVH 237
PNE+TL SVL +C + G L GKL+H
Sbjct: 200 KPNEYTLASVLVSCGNLGDLVNGKLIH 226
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 101/204 (49%), Gaps = 3/204 (1%)
Query: 30 MIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKND 89
+I+ + K G + + +L++ ++ + + +VF+ + + WT+ I G V+N
Sbjct: 224 LIHGLVVKYGLESVVASQTSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNG 283
Query: 90 LPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVW 149
AL F +M + T+ S+L A + G+ +H V+ G V + +V
Sbjct: 284 REEVALSMFREMMRCSISPNHFTLSSILHACSSLAMLEAGEQIHAVTVKLG-VDGNKFVD 342
Query: 150 SALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDN 209
+AL+ +Y KCG+ + A VFD + + D+V + ++ Y Q +A+ +F +
Sbjct: 343 AALIHLYGKCGNVEKARSVFDSL--TELDIVSINTMIYAYAQNGFGHEALELFERLKKLG 400
Query: 210 VVPNEFTLTSVLSACAHSGALDQG 233
+ PN T S+L AC ++G +++G
Sbjct: 401 LEPNVVTFISILLACNNAGLVEEG 424
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 85/187 (45%), Gaps = 3/187 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M + + P+ T +L S ++E I+A KLG D ++F ALI + G
Sbjct: 295 MMRCSISPNHFTLSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKFVDAALIHLYGKCGN 354
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ A VFD + DI++ +I Y +N EAL+ F +++ G + +T +S+L A
Sbjct: 355 VEKARSVFDSLTELDIVSINTMIYAYAQNGFGHEALELFERLKKLGLEPNVVTFISILLA 414
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
AG G + ++L ++ ++D+ + ++A + +E DV
Sbjct: 415 CNNAGLVEEGCQIFSLIRNNHSIELTRDHYTCMIDLLGRAKRFEEATMLIEEGKNP--DV 472
Query: 180 VCWSVLV 186
+ W L+
Sbjct: 473 IQWRTLL 479
>Medtr3g006800.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:874317-871628 | 20130731
Length = 505
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 131/241 (54%), Gaps = 10/241 (4%)
Query: 2 RQKGVEPDQHTFPLLLKMFSKPVVED---PFMIYAQIFKLGFDLDRFAGNALISAFANSG 58
++ GV PD +T P L K+ + +++ +M + + KLG++ N+++ + G
Sbjct: 93 KRCGVLPDCYTLPPLFKISIR--IDECCLGWMCHGLVVKLGYEEIVVVNNSVLEFYVKCG 150
Query: 59 FIGSACQVF-DESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGV--DALTVVS 115
+ A VF + ++ +D W +I+G+ K L SEA+ CF +M G+ D +T+ S
Sbjct: 151 TMSQALSVFSNHNAPRDSATWNLMISGFGKAGLYSEAVHCFREMLKYRNGIELDHMTLPS 210
Query: 116 VLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYS 175
+L A GD K VHGF V+ D + +AL+D Y KCG D+ +F +
Sbjct: 211 ILSACGKEGDLLKVKEVHGFIVRNFGFDADAPIGNALIDNYGKCGSLKDSENIFKTV--C 268
Query: 176 YRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKL 235
Y ++V W+ +++ Y K Q+++ +F M+ + PN TLT++L++C+H G LDQGK
Sbjct: 269 YVNLVTWTTMISCYGMHGKGQESVVLFEKMMDEGFRPNAVTLTAILASCSHCGLLDQGKK 328
Query: 236 V 236
+
Sbjct: 329 I 329
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 103/212 (48%), Gaps = 6/212 (2%)
Query: 50 LISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVD 109
L+ A+ G I A ++FD+ +++ +W +I Y N + +AL F + G D
Sbjct: 41 LLLAYTKLGLISHARKLFDKMPQRNMHSWNIMIASYTHNSMYFDALTVFEAFKRCGVLPD 100
Query: 110 ALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVF 169
T+ + + + + G HG V+ G ++ V +++++ Y KCG A VF
Sbjct: 101 CYTLPPLFKISIRIDECCLGWMCHGLVVKLGYEEIV-VVNNSVLEFYVKCGTMSQALSVF 159
Query: 170 DEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLS--DNVVPNEFTLTSVLSACAHS 227
+ RD W+++++G+ + + +A+ F ML + + + TL S+LSAC
Sbjct: 160 SNHN-APRDSATWNLMISGFGKAGLYSEAVHCFREMLKYRNGIELDHMTLPSILSACGKE 218
Query: 228 GALDQGKLVHQYIECKKVSLNS-VELGTALVD 258
G L + K VH +I + ++ +G AL+D
Sbjct: 219 GDLLKVKEVHGFI-VRNFGFDADAPIGNALID 249
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 89/193 (46%), Gaps = 8/193 (4%)
Query: 3 QKGVEPDQHTFPLLLKMFSKPVVEDPFMIYAQIF-----KLGFDLDRFAGNALISAFANS 57
+ G+E D T P +L K E + ++ GFD D GNALI +
Sbjct: 198 RNGIELDHMTLPSILSACGK---EGDLLKVKEVHGFIVRNFGFDADAPIGNALIDNYGKC 254
Query: 58 GFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVL 117
G + + +F +++ WT +I+ Y + E++ F KM G +A+T+ ++L
Sbjct: 255 GSLKDSENIFKTVCYVNLVTWTTMISCYGMHGKGQESVVLFEKMMDEGFRPNAVTLTAIL 314
Query: 118 RAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYR 177
+ + G + GK + G + ++ ++ ++D++ +CG ++A ++ + M S
Sbjct: 315 ASCSHCGLLDQGKKIFGSMISDYGLEPTAEHYACMVDLFSRCGRLEEALQLLERMKSSSV 374
Query: 178 DVVCWSVLVAGYV 190
W L+AG V
Sbjct: 375 TGSMWGALLAGCV 387
>Medtr4g088840.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:35446469-35444694 | 20130731
Length = 591
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 137/255 (53%), Gaps = 5/255 (1%)
Query: 7 EPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQ 65
+P +TF + K + ++ ++++ +F GF + F A+++ +A S + A +
Sbjct: 113 KPSSYTFTSVFKACAHLSALKIGTILHSHVFVSGFGSNSFVQAAIVAFYAKSSALCVARK 172
Query: 66 VFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGD 125
VFD+ + ++AW +I+GY N L +EA+ F KM G D+ T VSV A + G
Sbjct: 173 VFDKMPQRSVVAWNTMISGYEHNGLANEAMTLFRKMNEMGVCPDSATFVSVSSACSQIGS 232
Query: 126 DNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVL 185
G WV+ V G ++++ + ++L++M+ +CG A VFD + S +V+ W+ +
Sbjct: 233 LELGCWVYDSIVSNG-IRVNVILGTSLINMFSRCGDVRRARAVFDSI--SEGNVIAWTAM 289
Query: 186 VAGYVQCNKFQDAIRVFWNMLSDN-VVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKK 244
++GY +A+ +F+ M + +VPN T +VLSACAH+G + +G+ V + +
Sbjct: 290 ISGYGMHGYGVEAMELFYEMKKERGLVPNTVTFVAVLSACAHAGLIHEGRQVFASMREEY 349
Query: 245 VSLNSVELGTALVDM 259
+ +E +VDM
Sbjct: 350 GLVPGLEHHVCMVDM 364
>Medtr8g479320.2 | PPR containing plant-like protein | HC |
chr8:33809079-33805443 | 20130731
Length = 498
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/212 (33%), Positives = 119/212 (56%), Gaps = 4/212 (1%)
Query: 24 VVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALIN 83
V+E ++ + K GFD F ++L+ +AN G I A +F+E+S KD + + +I+
Sbjct: 163 VLEHCPTLHVHVIKQGFDTSSFVISSLVDCYANWGQIDDAVLLFNETSEKDTVIYNTMIS 222
Query: 84 GYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQ 143
GY +N +ALK FV+MR T+ S+L A + G+ VH ++ G +
Sbjct: 223 GYCQNLYSEDALKLFVEMREKNMSPTDHTLSSILSACSSLAMLLQGRQVHSLVIKMGS-E 281
Query: 144 LDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFW 203
+ YV S L+DMY K G D+A V D+ S ++ V W+ ++ GY QC + +A+ +F
Sbjct: 282 RNVYVASTLIDMYSKGGDIDEAQCVLDQT--SKKNTVLWTSMIMGYAQCGRGLEALELFD 339
Query: 204 NMLS-DNVVPNEFTLTSVLSACAHSGALDQGK 234
+L+ ++P+ T+VL+AC H+G +D+G+
Sbjct: 340 YLLTKKELIPDHVCFTAVLTACNHAGFIDKGE 371
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 120/231 (51%), Gaps = 7/231 (3%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
I+A + + G++ + F +AL+ +A I A ++F D ++WT+LI G+ N
Sbjct: 68 IHAYMIRSGYEDNLFLCSALVDFYAKCFAIVDANKIFRAMKQHDQVSWTSLIAGFSANKQ 127
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLD--GYV 148
+AL F +M T + T+ SV+ A G + + +V + D +V
Sbjct: 128 GRDALLLFKEMLGTQIRPNCFTLTSVINACV--GQNGVLEHCPTLHVHVIKQGFDTSSFV 185
Query: 149 WSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSD 208
S+L+D Y G DDA +F+E S +D V ++ +++GY Q +DA+++F M
Sbjct: 186 ISSLVDCYANWGQIDDAVLLFNET--SEKDTVIYNTMISGYCQNLYSEDALKLFVEMREK 243
Query: 209 NVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
N+ P + TL+S+LSAC+ L QG+ VH + K S +V + + L+DM
Sbjct: 244 NMSPTDHTLSSILSACSSLAMLLQGRQVHSLV-IKMGSERNVYVASTLIDM 293
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 93/190 (48%), Gaps = 3/190 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
MR+K + P HT +L S ++ +++ + K+G + + + + LI ++ G
Sbjct: 240 MREKNMSPTDHTLSSILSACSSLAMLLQGRQVHSLVIKMGSERNVYVASTLIDMYSKGGD 299
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGV-DALTVVSVLR 118
I A V D++S K+ + WT++I GY + EAL+ F + + + D + +VL
Sbjct: 300 IDEAQCVLDQTSKKNTVLWTSMIMGYAQCGRGLEALELFDYLLTKKELIPDHVCFTAVLT 359
Query: 119 AAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRD 178
A AG + G+ + + D +++ L+D+Y + G+ A + +EMPY +
Sbjct: 360 ACNHAGFIDKGEEYFNKMITNYGLSPDIDIYACLIDLYARNGNLRKARDLMEEMPYD-PN 418
Query: 179 VVCWSVLVAG 188
+ WS ++
Sbjct: 419 CIIWSSFLSA 428
>Medtr8g479320.1 | PPR containing plant-like protein | HC |
chr8:33809124-33805421 | 20130731
Length = 498
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/212 (33%), Positives = 119/212 (56%), Gaps = 4/212 (1%)
Query: 24 VVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALIN 83
V+E ++ + K GFD F ++L+ +AN G I A +F+E+S KD + + +I+
Sbjct: 163 VLEHCPTLHVHVIKQGFDTSSFVISSLVDCYANWGQIDDAVLLFNETSEKDTVIYNTMIS 222
Query: 84 GYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQ 143
GY +N +ALK FV+MR T+ S+L A + G+ VH ++ G +
Sbjct: 223 GYCQNLYSEDALKLFVEMREKNMSPTDHTLSSILSACSSLAMLLQGRQVHSLVIKMGS-E 281
Query: 144 LDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFW 203
+ YV S L+DMY K G D+A V D+ S ++ V W+ ++ GY QC + +A+ +F
Sbjct: 282 RNVYVASTLIDMYSKGGDIDEAQCVLDQT--SKKNTVLWTSMIMGYAQCGRGLEALELFD 339
Query: 204 NMLS-DNVVPNEFTLTSVLSACAHSGALDQGK 234
+L+ ++P+ T+VL+AC H+G +D+G+
Sbjct: 340 YLLTKKELIPDHVCFTAVLTACNHAGFIDKGE 371
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 120/231 (51%), Gaps = 7/231 (3%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
I+A + + G++ + F +AL+ +A I A ++F D ++WT+LI G+ N
Sbjct: 68 IHAYMIRSGYEDNLFLCSALVDFYAKCFAIVDANKIFRAMKQHDQVSWTSLIAGFSANKQ 127
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLD--GYV 148
+AL F +M T + T+ SV+ A G + + +V + D +V
Sbjct: 128 GRDALLLFKEMLGTQIRPNCFTLTSVINACV--GQNGVLEHCPTLHVHVIKQGFDTSSFV 185
Query: 149 WSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSD 208
S+L+D Y G DDA +F+E S +D V ++ +++GY Q +DA+++F M
Sbjct: 186 ISSLVDCYANWGQIDDAVLLFNET--SEKDTVIYNTMISGYCQNLYSEDALKLFVEMREK 243
Query: 209 NVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
N+ P + TL+S+LSAC+ L QG+ VH + K S +V + + L+DM
Sbjct: 244 NMSPTDHTLSSILSACSSLAMLLQGRQVHSLV-IKMGSERNVYVASTLIDM 293
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 93/190 (48%), Gaps = 3/190 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
MR+K + P HT +L S ++ +++ + K+G + + + + LI ++ G
Sbjct: 240 MREKNMSPTDHTLSSILSACSSLAMLLQGRQVHSLVIKMGSERNVYVASTLIDMYSKGGD 299
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGV-DALTVVSVLR 118
I A V D++S K+ + WT++I GY + EAL+ F + + + D + +VL
Sbjct: 300 IDEAQCVLDQTSKKNTVLWTSMIMGYAQCGRGLEALELFDYLLTKKELIPDHVCFTAVLT 359
Query: 119 AAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRD 178
A AG + G+ + + D +++ L+D+Y + G+ A + +EMPY +
Sbjct: 360 ACNHAGFIDKGEEYFNKMITNYGLSPDIDIYACLIDLYARNGNLRKARDLMEEMPYD-PN 418
Query: 179 VVCWSVLVAG 188
+ WS ++
Sbjct: 419 CIIWSSFLSA 428
>Medtr8g107740.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:45554142-45556499 | 20130731
Length = 785
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 126/231 (54%), Gaps = 4/231 (1%)
Query: 5 GVEPDQHTFPLLLKMFSKPV-VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSA 63
G+ P T +L+ ++ ++ ++ + K G DLD GN+LIS +A G + +A
Sbjct: 307 GLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYAKCGIMDNA 366
Query: 64 CQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMA 123
DE KD ++++A+I+G V+N +AL F +M+S+G T++++L A +
Sbjct: 367 VGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLETMIALLPACSHL 426
Query: 124 GDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWS 183
G HG+ V G D + +A++DMY KCG + ++FD M RD++ W+
Sbjct: 427 AALQHGTCCHGYTVVRGFTN-DTSICNAIIDMYSKCGKITISREIFDRM--QNRDIISWN 483
Query: 184 VLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGK 234
++ GY +A+ +F + + + P++ TL +VLSAC+HSG + +GK
Sbjct: 484 TMIIGYGIHGLCVEALSLFQELQALGLKPDDVTLIAVLSACSHSGLVTEGK 534
Score = 114 bits (286), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 137/264 (51%), Gaps = 10/264 (3%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M Q GV P TFP LLK S ++ +I+ LG +D + AL+ +A G
Sbjct: 98 MLQLGVTPTNFTFPFLLKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGH 157
Query: 60 IGSACQVFDESSV--KDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVL 117
+ A +F+ S +DI+AW A+I + + L ++ + +M+ G ++ T+VS+L
Sbjct: 158 LYQAQTLFNSISHQDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSIL 217
Query: 118 RAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVW-SALMDMYFKCGHCDDACKVFDEMPYSY 176
A + GK +H +Y++ D V +AL+DMY KC A K+F+ + +
Sbjct: 218 PTIGQANALHQGKAIHAYYIR--NFFFDNVVLQTALLDMYAKCHLLFYARKIFNTV--NK 273
Query: 177 RDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSD-NVVPNEFTLTSVLSACAHSGALDQGKL 235
++ VCWS ++ GYV + DA+ ++ +ML + P TL ++L ACA L +GK
Sbjct: 274 KNDVCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKK 333
Query: 236 VHQYIECKKVSLNSVELGTALVDM 259
+H ++ + L++ +G +L+ M
Sbjct: 334 LHCHMIKSGMDLDTT-VGNSLISM 356
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 129/261 (49%), Gaps = 6/261 (2%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKP-VVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M+Q GV P+ T +L + + I+A + F + AL+ +A
Sbjct: 201 MQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAYYIRNFFFDNVVLQTALLDMYAKCHL 260
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRST-GTGVDALTVVSVLR 118
+ A ++F+ + K+ + W+A+I GYV +D S+AL + M G T+ ++LR
Sbjct: 261 LFYARKIFNTVNKKNDVCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATLATMLR 320
Query: 119 AAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRD 178
A A D GK +H +++G + LD V ++L+ MY KCG D+A DEM +D
Sbjct: 321 ACAQLTDLKRGKKLHCHMIKSG-MDLDTTVGNSLISMYAKCGIMDNAVGFLDEMIA--KD 377
Query: 179 VVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQ 238
V +S +++G VQ + A+ +F M S + P T+ ++L AC+H AL G H
Sbjct: 378 TVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLETMIALLPACSHLAALQHGTCCHG 437
Query: 239 YIECKKVSLNSVELGTALVDM 259
Y + + N + A++DM
Sbjct: 438 YTVVRGFT-NDTSICNAIIDM 457
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 92/200 (46%), Gaps = 2/200 (1%)
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
I A VFD+ ++ W +I Y + +++ ++ M G T +L+A
Sbjct: 57 IQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTFPFLLKA 116
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
+ G+ +H G + +D YV +AL+ MY KCGH A +F+ + + RD+
Sbjct: 117 CSSLQALQLGRLIHTHAHILG-LSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRDI 175
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQY 239
V W+ ++A + I M V PN TL S+L + AL QGK +H Y
Sbjct: 176 VAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAY 235
Query: 240 IECKKVSLNSVELGTALVDM 259
+ ++V L TAL+DM
Sbjct: 236 Y-IRNFFFDNVVLQTALLDM 254
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 87/189 (46%), Gaps = 2/189 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M+ G+ P T LL S ++ + GF D NA+I ++ G
Sbjct: 404 MQSSGIAPYLETMIALLPACSHLAALQHGTCCHGYTVVRGFTNDTSICNAIIDMYSKCGK 463
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
I + ++FD +DII+W +I GY + L EAL F ++++ G D +T+++VL A
Sbjct: 464 ITISREIFDRMQNRDIISWNTMIIGYGIHGLCVEALSLFQELQALGLKPDDVTLIAVLSA 523
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
+ +G GK+ Q ++ + ++D+ + G+ D+A MP+ +V
Sbjct: 524 CSHSGLVTEGKYWFSSMSQNFNIKPRMAHYICMVDLLARAGNLDEAYTFIQRMPF-VPNV 582
Query: 180 VCWSVLVAG 188
W L+A
Sbjct: 583 RIWGALLAA 591
>Medtr7g076350.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:28741911-28744729 | 20130731
Length = 786
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 134/279 (48%), Gaps = 45/279 (16%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPFMIYAQIF----KLGFDLDRFAGNALISAFAN 56
++++G++PD P+ L V + ++ + G D F GNALI A+
Sbjct: 69 LQERGIKPD---MPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGK 125
Query: 57 SGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSV 116
+ A +VFD+ V+D+++WT+L + YVK P + + F +M +G + +TV S+
Sbjct: 126 CKCVEGARRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSI 185
Query: 117 LRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSY 176
L A A D GK +HGF V+ G V ++ +V SAL+ +Y KC +A VFD MP +
Sbjct: 186 LPACAELKDLKSGKEIHGFAVRHGMV-VNLFVCSALVSLYAKCLSVREARMVFDLMP--H 242
Query: 177 RDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVV------------------------- 211
RDVV W+ ++ Y + +++ +F M D V
Sbjct: 243 RDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEM 302
Query: 212 ----------PNEFTLTSVLSACAHSGALDQGKLVHQYI 240
PNE T++S+L AC+ S L GK +H Y+
Sbjct: 303 FRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYV 341
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 98/202 (48%), Gaps = 3/202 (1%)
Query: 38 LGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKC 97
L ++ G LI N G A Q+FD D + LI+ + L +EA+K
Sbjct: 6 LPTNIPSHLGLRLIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKI 65
Query: 98 FVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYF 157
+ ++ G D ++ +A A++GD K VH + G V D +V +AL+ Y
Sbjct: 66 YSSLQERGIKPDMPVFLAAAKACAVSGDALRVKEVHDDATRCG-VMSDVFVGNALIHAYG 124
Query: 158 KCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTL 217
KC + A +VFD++ RDVV W+ L + YV+C + + VF M V PN T+
Sbjct: 125 KCKCVEGARRVFDDL--VVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTV 182
Query: 218 TSVLSACAHSGALDQGKLVHQY 239
+S+L ACA L GK +H +
Sbjct: 183 SSILPACAELKDLKSGKEIHGF 204
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 85/160 (53%), Gaps = 3/160 (1%)
Query: 74 DIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVH 133
D W A+I G ++N EA++ F KM+ G + +T+ S+L A + + + GK +H
Sbjct: 279 DEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIH 338
Query: 134 GFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCN 193
+ + +V D +AL+ MY KCG + + VFD M +DVV W+ ++
Sbjct: 339 CYVFRHWKVG-DLTSTTALLYMYAKCGDLNLSRNVFDMM--RRKDVVAWNTMIIANAMHG 395
Query: 194 KFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
++A+ +F ML V PN T T VLS C+HS +++G
Sbjct: 396 NGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEG 435
>Medtr5g031490.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:13515619-13513589 | 20130731
Length = 676
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 79/238 (33%), Positives = 126/238 (52%), Gaps = 9/238 (3%)
Query: 4 KGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDL-DRFAGNALISAFANSGFIG 61
+GV PD +TF + K FS+ V + + LGF++ D F ++ +A G +
Sbjct: 95 EGVLPDAYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFEVSDGFVATGIVDMYAKFGKMK 154
Query: 62 SACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAA 121
A VFD KD++ +TALI GY + L EAL+ F M + + T+ SVL +
Sbjct: 155 DARFVFDRVLDKDVVLFTALIVGYNQRGLDGEALEVFEDMVGSRIKPNEYTLASVLVSCG 214
Query: 122 MAGDDNFGKWVHGFYVQAGRVQLDGYVWS--ALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
GD GK +HG V++G L+ V S +L+ MY KC +D+ KVF+ + Y+
Sbjct: 215 NLGDLVNGKLIHGLVVKSG---LESVVASQTSLLTMYSKCNMVEDSIKVFNSLAYASH-- 269
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVH 237
V W+ + G VQ + + A+ +F M+ ++ PN FT +S+L AC+ L+ G+ +H
Sbjct: 270 VTWTSFIVGLVQNGREEIALSMFREMIRCSISPNHFTFSSILHACSSLAMLEAGEQIH 327
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 108/207 (52%), Gaps = 3/207 (1%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
++ I K G L F G+ LI + I A ++FDE + I+ W ++I+ +V
Sbjct: 23 LHTHILKSG-SLFSFFGHKLIDGYIKCSVITEARKLFDEMPNRHIVTWNSMISSHVSRGK 81
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
EA++ + M G DA T ++ +A + G G+ HG V G DG+V +
Sbjct: 82 TKEAIELYDNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFEVSDGFVAT 141
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV 210
++DMY K G DA VFD + +DVV ++ L+ GY Q +A+ VF +M+ +
Sbjct: 142 GIVDMYAKFGKMKDARFVFDRVL--DKDVVLFTALIVGYNQRGLDGEALEVFEDMVGSRI 199
Query: 211 VPNEFTLTSVLSACAHSGALDQGKLVH 237
PNE+TL SVL +C + G L GKL+H
Sbjct: 200 KPNEYTLASVLVSCGNLGDLVNGKLIH 226
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 99/204 (48%), Gaps = 3/204 (1%)
Query: 30 MIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKND 89
+I+ + K G + + +L++ ++ + + +VF+ + + WT+ I G V+N
Sbjct: 224 LIHGLVVKSGLESVVASQTSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNG 283
Query: 90 LPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVW 149
AL F +M + T S+L A + G+ +H V+ G V + YV
Sbjct: 284 REEIALSMFREMIRCSISPNHFTFSSILHACSSLAMLEAGEQIHAVTVKLG-VDGNKYVD 342
Query: 150 SALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDN 209
+AL+ +Y KCG+ + A VF+ + + DVV + ++ Y Q +A+ +F M
Sbjct: 343 AALIHLYGKCGNVEKARSVFESL--TELDVVSINTMIYAYAQNGFGHEALELFERMKKLG 400
Query: 210 VVPNEFTLTSVLSACAHSGALDQG 233
PN T S+L AC ++G +++G
Sbjct: 401 HKPNVVTFISILLACNNAGLVEEG 424
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 84/182 (46%), Gaps = 3/182 (1%)
Query: 6 VEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSAC 64
+ P+ TF +L S ++E I+A KLG D +++ ALI + G + A
Sbjct: 300 ISPNHFTFSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKYVDAALIHLYGKCGNVEKAR 359
Query: 65 QVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAG 124
VF+ + D+++ +I Y +N EAL+ F +M+ G + +T +S+L A AG
Sbjct: 360 SVFESLTELDVVSINTMIYAYAQNGFGHEALELFERMKKLGHKPNVVTFISILLACNNAG 419
Query: 125 DDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSV 184
G + ++L ++ ++D+ + ++A + +E DV+ W
Sbjct: 420 LVEEGCQIFSLIRNNHSIELTRDHYTCMIDLLGRAKRFEEAAMLIEEGKNP--DVIQWRT 477
Query: 185 LV 186
L+
Sbjct: 478 LL 479
>Medtr5g043780.1 | PPR containing plant-like protein | HC |
chr5:19239453-19241320 | 20130731
Length = 525
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 85/275 (30%), Positives = 130/275 (47%), Gaps = 48/275 (17%)
Query: 1 MRQKGVEPDQHTFPLLLKM--------FSKPVVEDPFMIYAQIFKLGFDLDRFAGNAL-- 50
M Q ++PD +T P +LK F K MI+ KLG D + GN+L
Sbjct: 98 MLQSELKPDNYTIPYVLKACGTFHDCSFGK-------MIHGYSSKLGLVFDIYVGNSLMA 150
Query: 51 -----------------------------ISAFANSGFIGSACQVFDESSVKDIIAWTAL 81
IS +A G + SA FDE+ KD W A+
Sbjct: 151 MYCVFGDVVAARYVFDEIPSLNVVSWSVMISGYAKVGDVDSARLFFDEAPEKDKGIWGAM 210
Query: 82 INGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGR 141
I+GYV+N E+L F M+ T D VS+L A A G G W+H Q
Sbjct: 211 ISGYVQNSCFKESLYLFRLMQLTDIVPDESIFVSILSACAHLGALEIGVWIHQHLNQLKL 270
Query: 142 VQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRV 201
V L + ++L+DMY KCG+ + A ++FD M + RDVVCW+ +++G + A+++
Sbjct: 271 VPLSVRLSTSLLDMYAKCGNLELAKRLFDSM--NMRDVVCWNAMISGMAMHGDGKGALKL 328
Query: 202 FWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLV 236
F++M V P++ T +V +AC++SG +G ++
Sbjct: 329 FYDMEKVGVKPDDITFIAVFTACSYSGMAYEGLML 363
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/264 (31%), Positives = 130/264 (49%), Gaps = 40/264 (15%)
Query: 32 YAQIFKLGFDLDRFAGNALISAFANSG-----FIGSACQVFDESSVKDIIAWTALINGYV 86
+AQ+F G + + FA + ++ AF +S + AC+VF++ + + LI ++
Sbjct: 25 HAQVFTTGLENNTFALSRVL-AFCSSHKHHHESLTYACRVFEQIQNPTVCIYNTLIKAFL 83
Query: 87 KNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDG 146
N+ AL+ FVKM + D T+ VL+A D +FGK +HG+ + G V D
Sbjct: 84 VNNKFKSALQVFVKMLQSELKPDNYTIPYVLKACGTFHDCSFGKMIHGYSSKLGLV-FDI 142
Query: 147 YV-------------------------------WSALMDMYFKCGHCDDACKVFDEMPYS 175
YV WS ++ Y K G D A FDE P
Sbjct: 143 YVGNSLMAMYCVFGDVVAARYVFDEIPSLNVVSWSVMISGYAKVGDVDSARLFFDEAPE- 201
Query: 176 YRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKL 235
+D W +++GYVQ + F++++ +F M ++VP+E S+LSACAH GAL+ G
Sbjct: 202 -KDKGIWGAMISGYVQNSCFKESLYLFRLMQLTDIVPDESIFVSILSACAHLGALEIGVW 260
Query: 236 VHQYIECKKVSLNSVELGTALVDM 259
+HQ++ K+ SV L T+L+DM
Sbjct: 261 IHQHLNQLKLVPLSVRLSTSLLDM 284
>Medtr3g105370.2 | pentatricopeptide (PPR) repeat protein | HC |
chr3:48574897-48577818 | 20130731
Length = 973
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 132/261 (50%), Gaps = 10/261 (3%)
Query: 3 QKGVEPDQHTFPLLLKMFSKPVVEDPFMIYAQI----FKLGFDLDRFAGNALISAFANSG 58
+ G+ PDQ T +L+ S +E+ + + Q+ K G LD F ALI ++ G
Sbjct: 391 RSGLLPDQFTITSVLRACSS--LEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGG 448
Query: 59 FIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLR 118
+ A +F D+ +W A+++G+ +D EAL+ F M G D +T + +
Sbjct: 449 KMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAK 508
Query: 119 AAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRD 178
AA GK +H ++ R D +V S ++DMY KCG A KVF+++P D
Sbjct: 509 AAGCLVRLQQGKQIHAVVIKM-RFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSP--D 565
Query: 179 VVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQ 238
V W+ +++G V+ + + A+ + M V P+E+T +++ AC+ AL+QGK +H
Sbjct: 566 DVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHA 625
Query: 239 YIECKKVSLNSVELGTALVDM 259
I + + + T+LVDM
Sbjct: 626 NIMKLNCAFDPFVM-TSLVDM 645
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 119/229 (51%), Gaps = 4/229 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPV-VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M ++G + DQ TF K V ++ I+A + K+ F D F + ++ + G
Sbjct: 491 MHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGE 550
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ SA +VF++ D +AWT +I+G V+N +AL + +MR G D T ++++A
Sbjct: 551 MKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKA 610
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
++ GK +H ++ D +V ++L+DMY KCG+ +DA +F M + R V
Sbjct: 611 CSLLTALEQGKQIHANIMKLN-CAFDPFVMTSLVDMYAKCGNIEDAYGLFRRM--NTRSV 667
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSG 228
W+ ++ G Q ++A+ F M S V P+ T VLSAC+HSG
Sbjct: 668 ALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSG 716
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 108/211 (51%), Gaps = 4/211 (1%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
I+ + + G+D N+ I+ + +G + A ++F + D+I+W +I+G ++ L
Sbjct: 319 IHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGL 378
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRA-AAMAGDDNFGKWVHGFYVQAGRVQLDGYVW 149
+L+ F+ + +G D T+ SVLRA +++ G+ VH ++AG V LD +V
Sbjct: 379 EECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIV-LDSFVS 437
Query: 150 SALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDN 209
+AL+D+Y K G ++A +F D+ W+ ++ G+ + +++A+R+F M
Sbjct: 438 TALIDVYSKGGKMEEAELLFHNQDGF--DLASWNAMMHGFTVSDNYREALRLFSLMHERG 495
Query: 210 VVPNEFTLTSVLSACAHSGALDQGKLVHQYI 240
++ T + A L QGK +H +
Sbjct: 496 EKADQITFANAAKAAGCLVRLQQGKQIHAVV 526
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 96/200 (48%), Gaps = 11/200 (5%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
MR GV+PD++TF L+K S +E I+A I KL D F +L+ +A G
Sbjct: 592 MRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGN 651
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
I A +F + + + W A+I G ++ EAL F +M+S G D +T + VL A
Sbjct: 652 IEDAYGLFRRMNTRSVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSA 711
Query: 120 AAMAG-----DDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPY 174
+ +G NF + V+ +++ Y S L+D + GH +A KV MP+
Sbjct: 712 CSHSGLTSDAYKNFDSMQKTYGVEP---EIEHY--SCLVDALSRAGHIQEAEKVVSSMPF 766
Query: 175 SYRDVVCWSVLVAGYVQCNK 194
+ ++L A VQ +K
Sbjct: 767 EASATMYRTLLNACRVQGDK 786
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 100/190 (52%), Gaps = 11/190 (5%)
Query: 74 DIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVH 133
D+ W ++ Y++ EA+ CF M + D+LT + +L A GK +H
Sbjct: 261 DVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIH 320
Query: 134 GFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCN 193
G V+ G Q SA+ +MY K G + A ++F +M D++ W+ +++G +
Sbjct: 321 GAVVRFGWDQFVSVANSAI-NMYVKAGSVNYARRMFGQMKEV--DLISWNTVISGCARSG 377
Query: 194 KFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQ----GKLVHQYIECKKVSLNS 249
+ ++R+F ++L ++P++FT+TSVL AC+ +L++ G+ VH + L+S
Sbjct: 378 LEECSLRLFIDLLRSGLLPDQFTITSVLRACS---SLEESYCVGRQVHTCALKAGIVLDS 434
Query: 250 VELGTALVDM 259
+ TAL+D+
Sbjct: 435 F-VSTALIDV 443
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 96/198 (48%), Gaps = 11/198 (5%)
Query: 32 YAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFD--ESSVKDIIAWTALINGYVKN- 88
+A I G + DR+ N LI+ +A G + SA ++FD S +D++ + A++ Y
Sbjct: 36 HAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAILAAYAHTG 95
Query: 89 -----DLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQ 143
+ EA F +R + T+ + + + G + + + G+ V+ G +Q
Sbjct: 96 ELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSASEALQGYAVKIG-LQ 154
Query: 144 LDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFW 203
D +V AL+++Y K +A +FD MP RDVV W+V++ YV+ + + +F
Sbjct: 155 WDVFVAGALVNIYAKFQRIREARVLFDRMP--VRDVVLWNVMMKAYVEMGAGDEVLGLFS 212
Query: 204 NMLSDNVVPNEFTLTSVL 221
+ P+ ++ ++L
Sbjct: 213 AFHRSGLRPDCVSVRTIL 230
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 95/240 (39%), Gaps = 35/240 (14%)
Query: 1 MRQKGVEPDQHTFPLLLKM---FSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANS 57
+RQ + +HT L K+ + P + YA K+G D F AL++ +A
Sbjct: 113 LRQSVMLTTRHTLSPLFKLCLLYGSPSASEALQGYA--VKIGLQWDVFVAGALVNIYAKF 170
Query: 58 GFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVL 117
I A +FD V+D++ W ++ YV+ E L F +G D ++V ++L
Sbjct: 171 QRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTIL 230
Query: 118 RAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYR 177
+ F + + Q+ Y + CDD
Sbjct: 231 --MGVGKKTVFERELE---------QVRAYATKLFV--------CDDDS----------- 260
Query: 178 DVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVH 237
DV W+ ++ Y+Q + +A+ F +M+ V + T +LS A L+ GK +H
Sbjct: 261 DVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIH 320
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 59/131 (45%), Gaps = 7/131 (5%)
Query: 115 SVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPY 174
S+LR A D GK H V +G + D YV + L+ MY KCG A K+FD P
Sbjct: 18 SILRHAIADSDLILGKRTHAVIVTSG-LNPDRYVTNNLITMYAKCGSLFSARKLFDITPQ 76
Query: 175 SYRDVVCWSVLVAGYVQCNKFQD------AIRVFWNMLSDNVVPNEFTLTSVLSACAHSG 228
S RD+V ++ ++A Y + D A +F + ++ TL+ + C G
Sbjct: 77 SDRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYG 136
Query: 229 ALDQGKLVHQY 239
+ + + Y
Sbjct: 137 SPSASEALQGY 147
>Medtr3g105370.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:48574897-48577818 | 20130731
Length = 973
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 132/261 (50%), Gaps = 10/261 (3%)
Query: 3 QKGVEPDQHTFPLLLKMFSKPVVEDPFMIYAQI----FKLGFDLDRFAGNALISAFANSG 58
+ G+ PDQ T +L+ S +E+ + + Q+ K G LD F ALI ++ G
Sbjct: 391 RSGLLPDQFTITSVLRACSS--LEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGG 448
Query: 59 FIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLR 118
+ A +F D+ +W A+++G+ +D EAL+ F M G D +T + +
Sbjct: 449 KMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAK 508
Query: 119 AAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRD 178
AA GK +H ++ R D +V S ++DMY KCG A KVF+++P D
Sbjct: 509 AAGCLVRLQQGKQIHAVVIKM-RFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSP--D 565
Query: 179 VVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQ 238
V W+ +++G V+ + + A+ + M V P+E+T +++ AC+ AL+QGK +H
Sbjct: 566 DVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHA 625
Query: 239 YIECKKVSLNSVELGTALVDM 259
I + + + T+LVDM
Sbjct: 626 NIMKLNCAFDPFVM-TSLVDM 645
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 119/229 (51%), Gaps = 4/229 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPV-VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M ++G + DQ TF K V ++ I+A + K+ F D F + ++ + G
Sbjct: 491 MHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGE 550
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ SA +VF++ D +AWT +I+G V+N +AL + +MR G D T ++++A
Sbjct: 551 MKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKA 610
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
++ GK +H ++ D +V ++L+DMY KCG+ +DA +F M + R V
Sbjct: 611 CSLLTALEQGKQIHANIMKLN-CAFDPFVMTSLVDMYAKCGNIEDAYGLFRRM--NTRSV 667
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSG 228
W+ ++ G Q ++A+ F M S V P+ T VLSAC+HSG
Sbjct: 668 ALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSG 716
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 108/211 (51%), Gaps = 4/211 (1%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
I+ + + G+D N+ I+ + +G + A ++F + D+I+W +I+G ++ L
Sbjct: 319 IHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGL 378
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRA-AAMAGDDNFGKWVHGFYVQAGRVQLDGYVW 149
+L+ F+ + +G D T+ SVLRA +++ G+ VH ++AG V LD +V
Sbjct: 379 EECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIV-LDSFVS 437
Query: 150 SALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDN 209
+AL+D+Y K G ++A +F D+ W+ ++ G+ + +++A+R+F M
Sbjct: 438 TALIDVYSKGGKMEEAELLFHNQDGF--DLASWNAMMHGFTVSDNYREALRLFSLMHERG 495
Query: 210 VVPNEFTLTSVLSACAHSGALDQGKLVHQYI 240
++ T + A L QGK +H +
Sbjct: 496 EKADQITFANAAKAAGCLVRLQQGKQIHAVV 526
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 96/200 (48%), Gaps = 11/200 (5%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
MR GV+PD++TF L+K S +E I+A I KL D F +L+ +A G
Sbjct: 592 MRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGN 651
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
I A +F + + + W A+I G ++ EAL F +M+S G D +T + VL A
Sbjct: 652 IEDAYGLFRRMNTRSVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSA 711
Query: 120 AAMAG-----DDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPY 174
+ +G NF + V+ +++ Y S L+D + GH +A KV MP+
Sbjct: 712 CSHSGLTSDAYKNFDSMQKTYGVEP---EIEHY--SCLVDALSRAGHIQEAEKVVSSMPF 766
Query: 175 SYRDVVCWSVLVAGYVQCNK 194
+ ++L A VQ +K
Sbjct: 767 EASATMYRTLLNACRVQGDK 786
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 100/190 (52%), Gaps = 11/190 (5%)
Query: 74 DIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVH 133
D+ W ++ Y++ EA+ CF M + D+LT + +L A GK +H
Sbjct: 261 DVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIH 320
Query: 134 GFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCN 193
G V+ G Q SA+ +MY K G + A ++F +M D++ W+ +++G +
Sbjct: 321 GAVVRFGWDQFVSVANSAI-NMYVKAGSVNYARRMFGQMKEV--DLISWNTVISGCARSG 377
Query: 194 KFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQ----GKLVHQYIECKKVSLNS 249
+ ++R+F ++L ++P++FT+TSVL AC+ +L++ G+ VH + L+S
Sbjct: 378 LEECSLRLFIDLLRSGLLPDQFTITSVLRACS---SLEESYCVGRQVHTCALKAGIVLDS 434
Query: 250 VELGTALVDM 259
+ TAL+D+
Sbjct: 435 F-VSTALIDV 443
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 96/198 (48%), Gaps = 11/198 (5%)
Query: 32 YAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFD--ESSVKDIIAWTALINGYVKN- 88
+A I G + DR+ N LI+ +A G + SA ++FD S +D++ + A++ Y
Sbjct: 36 HAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAILAAYAHTG 95
Query: 89 -----DLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQ 143
+ EA F +R + T+ + + + G + + + G+ V+ G +Q
Sbjct: 96 ELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSASEALQGYAVKIG-LQ 154
Query: 144 LDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFW 203
D +V AL+++Y K +A +FD MP RDVV W+V++ YV+ + + +F
Sbjct: 155 WDVFVAGALVNIYAKFQRIREARVLFDRMP--VRDVVLWNVMMKAYVEMGAGDEVLGLFS 212
Query: 204 NMLSDNVVPNEFTLTSVL 221
+ P+ ++ ++L
Sbjct: 213 AFHRSGLRPDCVSVRTIL 230
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 95/240 (39%), Gaps = 35/240 (14%)
Query: 1 MRQKGVEPDQHTFPLLLKM---FSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANS 57
+RQ + +HT L K+ + P + YA K+G D F AL++ +A
Sbjct: 113 LRQSVMLTTRHTLSPLFKLCLLYGSPSASEALQGYA--VKIGLQWDVFVAGALVNIYAKF 170
Query: 58 GFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVL 117
I A +FD V+D++ W ++ YV+ E L F +G D ++V ++L
Sbjct: 171 QRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTIL 230
Query: 118 RAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYR 177
+ F + + Q+ Y + CDD
Sbjct: 231 --MGVGKKTVFERELE---------QVRAYATKLFV--------CDDDS----------- 260
Query: 178 DVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVH 237
DV W+ ++ Y+Q + +A+ F +M+ V + T +LS A L+ GK +H
Sbjct: 261 DVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIH 320
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 59/131 (45%), Gaps = 7/131 (5%)
Query: 115 SVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPY 174
S+LR A D GK H V +G + D YV + L+ MY KCG A K+FD P
Sbjct: 18 SILRHAIADSDLILGKRTHAVIVTSG-LNPDRYVTNNLITMYAKCGSLFSARKLFDITPQ 76
Query: 175 SYRDVVCWSVLVAGYVQCNKFQD------AIRVFWNMLSDNVVPNEFTLTSVLSACAHSG 228
S RD+V ++ ++A Y + D A +F + ++ TL+ + C G
Sbjct: 77 SDRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYG 136
Query: 229 ALDQGKLVHQY 239
+ + + Y
Sbjct: 137 SPSASEALQGY 147
>Medtr3g105370.3 | pentatricopeptide (PPR) repeat protein | HC |
chr3:48574897-48578894 | 20130731
Length = 993
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 132/261 (50%), Gaps = 10/261 (3%)
Query: 3 QKGVEPDQHTFPLLLKMFSKPVVEDPFMIYAQI----FKLGFDLDRFAGNALISAFANSG 58
+ G+ PDQ T +L+ S +E+ + + Q+ K G LD F ALI ++ G
Sbjct: 391 RSGLLPDQFTITSVLRACSS--LEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGG 448
Query: 59 FIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLR 118
+ A +F D+ +W A+++G+ +D EAL+ F M G D +T + +
Sbjct: 449 KMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAK 508
Query: 119 AAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRD 178
AA GK +H ++ R D +V S ++DMY KCG A KVF+++P D
Sbjct: 509 AAGCLVRLQQGKQIHAVVIKM-RFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSP--D 565
Query: 179 VVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQ 238
V W+ +++G V+ + + A+ + M V P+E+T +++ AC+ AL+QGK +H
Sbjct: 566 DVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHA 625
Query: 239 YIECKKVSLNSVELGTALVDM 259
I + + + T+LVDM
Sbjct: 626 NIMKLNCAFDPFVM-TSLVDM 645
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 119/229 (51%), Gaps = 4/229 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPV-VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M ++G + DQ TF K V ++ I+A + K+ F D F + ++ + G
Sbjct: 491 MHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGE 550
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ SA +VF++ D +AWT +I+G V+N +AL + +MR G D T ++++A
Sbjct: 551 MKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKA 610
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
++ GK +H ++ D +V ++L+DMY KCG+ +DA +F M + R V
Sbjct: 611 CSLLTALEQGKQIHANIMKLN-CAFDPFVMTSLVDMYAKCGNIEDAYGLFRRM--NTRSV 667
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSG 228
W+ ++ G Q ++A+ F M S V P+ T VLSAC+HSG
Sbjct: 668 ALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSG 716
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 108/211 (51%), Gaps = 4/211 (1%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
I+ + + G+D N+ I+ + +G + A ++F + D+I+W +I+G ++ L
Sbjct: 319 IHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGL 378
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRA-AAMAGDDNFGKWVHGFYVQAGRVQLDGYVW 149
+L+ F+ + +G D T+ SVLRA +++ G+ VH ++AG V LD +V
Sbjct: 379 EECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIV-LDSFVS 437
Query: 150 SALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDN 209
+AL+D+Y K G ++A +F D+ W+ ++ G+ + +++A+R+F M
Sbjct: 438 TALIDVYSKGGKMEEAELLFHNQDGF--DLASWNAMMHGFTVSDNYREALRLFSLMHERG 495
Query: 210 VVPNEFTLTSVLSACAHSGALDQGKLVHQYI 240
++ T + A L QGK +H +
Sbjct: 496 EKADQITFANAAKAAGCLVRLQQGKQIHAVV 526
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 96/200 (48%), Gaps = 11/200 (5%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
MR GV+PD++TF L+K S +E I+A I KL D F +L+ +A G
Sbjct: 592 MRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGN 651
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
I A +F + + + W A+I G ++ EAL F +M+S G D +T + VL A
Sbjct: 652 IEDAYGLFRRMNTRSVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSA 711
Query: 120 AAMAG-----DDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPY 174
+ +G NF + V+ +++ Y S L+D + GH +A KV MP+
Sbjct: 712 CSHSGLTSDAYKNFDSMQKTYGVEP---EIEHY--SCLVDALSRAGHIQEAEKVVSSMPF 766
Query: 175 SYRDVVCWSVLVAGYVQCNK 194
+ ++L A VQ +K
Sbjct: 767 EASATMYRTLLNACRVQGDK 786
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 100/190 (52%), Gaps = 11/190 (5%)
Query: 74 DIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVH 133
D+ W ++ Y++ EA+ CF M + D+LT + +L A GK +H
Sbjct: 261 DVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIH 320
Query: 134 GFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCN 193
G V+ G Q SA+ +MY K G + A ++F +M D++ W+ +++G +
Sbjct: 321 GAVVRFGWDQFVSVANSAI-NMYVKAGSVNYARRMFGQMKEV--DLISWNTVISGCARSG 377
Query: 194 KFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQ----GKLVHQYIECKKVSLNS 249
+ ++R+F ++L ++P++FT+TSVL AC+ +L++ G+ VH + L+S
Sbjct: 378 LEECSLRLFIDLLRSGLLPDQFTITSVLRACS---SLEESYCVGRQVHTCALKAGIVLDS 434
Query: 250 VELGTALVDM 259
+ TAL+D+
Sbjct: 435 F-VSTALIDV 443
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 96/198 (48%), Gaps = 11/198 (5%)
Query: 32 YAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFD--ESSVKDIIAWTALINGYVKN- 88
+A I G + DR+ N LI+ +A G + SA ++FD S +D++ + A++ Y
Sbjct: 36 HAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAILAAYAHTG 95
Query: 89 -----DLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQ 143
+ EA F +R + T+ + + + G + + + G+ V+ G +Q
Sbjct: 96 ELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSASEALQGYAVKIG-LQ 154
Query: 144 LDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFW 203
D +V AL+++Y K +A +FD MP RDVV W+V++ YV+ + + +F
Sbjct: 155 WDVFVAGALVNIYAKFQRIREARVLFDRMP--VRDVVLWNVMMKAYVEMGAGDEVLGLFS 212
Query: 204 NMLSDNVVPNEFTLTSVL 221
+ P+ ++ ++L
Sbjct: 213 AFHRSGLRPDCVSVRTIL 230
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 95/240 (39%), Gaps = 35/240 (14%)
Query: 1 MRQKGVEPDQHTFPLLLKM---FSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANS 57
+RQ + +HT L K+ + P + YA K+G D F AL++ +A
Sbjct: 113 LRQSVMLTTRHTLSPLFKLCLLYGSPSASEALQGYA--VKIGLQWDVFVAGALVNIYAKF 170
Query: 58 GFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVL 117
I A +FD V+D++ W ++ YV+ E L F +G D ++V ++L
Sbjct: 171 QRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTIL 230
Query: 118 RAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYR 177
+ F + + Q+ Y + CDD
Sbjct: 231 --MGVGKKTVFERELE---------QVRAYATKLFV--------CDDDS----------- 260
Query: 178 DVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVH 237
DV W+ ++ Y+Q + +A+ F +M+ V + T +LS A L+ GK +H
Sbjct: 261 DVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIH 320
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 59/131 (45%), Gaps = 7/131 (5%)
Query: 115 SVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPY 174
S+LR A D GK H V +G + D YV + L+ MY KCG A K+FD P
Sbjct: 18 SILRHAIADSDLILGKRTHAVIVTSG-LNPDRYVTNNLITMYAKCGSLFSARKLFDITPQ 76
Query: 175 SYRDVVCWSVLVAGYVQCNKFQD------AIRVFWNMLSDNVVPNEFTLTSVLSACAHSG 228
S RD+V ++ ++A Y + D A +F + ++ TL+ + C G
Sbjct: 77 SDRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYG 136
Query: 229 ALDQGKLVHQY 239
+ + + Y
Sbjct: 137 SPSASEALQGY 147
>Medtr4g130500.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:54376407-54379381 | 20130731
Length = 783
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 113/204 (55%), Gaps = 3/204 (1%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
I+ K G L+ A + + I A +FDES K ++AW A+I+GY +N
Sbjct: 332 IHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFDESPEKTVVAWNAMISGYTQNGS 391
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
A+ F +M T +A+T+ ++L A A G +FGKWVH +++ ++ + YV +
Sbjct: 392 TETAISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGKWVHHL-IKSENLEPNIYVST 450
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV 210
AL+DMY KCG+ +A ++FD M S ++ V W+ ++ GY +A++++ ML
Sbjct: 451 ALVDMYAKCGNISEAWQLFDSM--SEKNTVTWNTMIFGYGLHGYGHEALKLYNEMLHLGY 508
Query: 211 VPNEFTLTSVLSACAHSGALDQGK 234
P+ T SVL AC+H+G + +G+
Sbjct: 509 NPSAVTFLSVLYACSHAGLVGEGE 532
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 121/224 (54%), Gaps = 4/224 (1%)
Query: 36 FKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEAL 95
K+GF + LIS ++ G + +A +F + D+IA+ A+I+G+ N ++
Sbjct: 236 LKIGFGFCDYVLTGLISLYSKCGDVNTARLLFRRINRPDLIAYNAMISGFTANGGTECSV 295
Query: 96 KCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDM 155
K F ++ +G V + T+V ++ + G + +HGF V++G + L+ V +A +
Sbjct: 296 KLFRELLFSGERVSSSTIVGLIPLHSPFGHLHLACSIHGFCVKSG-IILNPTVSTAFTAI 354
Query: 156 YFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEF 215
Y K D A +FDE P + VV W+ +++GY Q + AI +F M+ PN
Sbjct: 355 YNKLNEIDLARHLFDESPE--KTVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAV 412
Query: 216 TLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
T+T++LSACA G+L GK VH I+ + + N + + TALVDM
Sbjct: 413 TITTILSACAQLGSLSFGKWVHHLIKSENLEPN-IYVSTALVDM 455
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 101/205 (49%), Gaps = 5/205 (2%)
Query: 2 RQKGVEPDQHTFPLLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIG 61
R + PD T+ + S + +++A G+ + F G+AL+ + +
Sbjct: 103 RNTNLSPDNFTYAFAVAACSND--KHLMLLHAHSIIDGYGSNVFVGSALVDLYCKFSRVV 160
Query: 62 SACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAA 121
A +VFD +D + W +ING VKN ++++ F +M + G VD+ TV +VL AAA
Sbjct: 161 YARKVFDGMPERDTVLWNTMINGLVKNCCFDDSIQLFREMVADGVRVDSSTVTAVLPAAA 220
Query: 122 MAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVC 181
+ G + ++ G D YV + L+ +Y KCG + A +F + + D++
Sbjct: 221 ELQELKVGMGIQCLALKIGFGFCD-YVLTGLISLYSKCGDVNTARLLFRRI--NRPDLIA 277
Query: 182 WSVLVAGYVQCNKFQDAIRVFWNML 206
++ +++G+ + ++++F +L
Sbjct: 278 YNAMISGFTANGGTECSVKLFRELL 302
>Medtr7g100810.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:40624011-40626927 | 20130731
Length = 793
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 133/261 (50%), Gaps = 5/261 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPV-VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M G+ PD T+ LL PV + I++ I K+GFD + N+L++ +
Sbjct: 360 MIHIGLTPDSITYISLLCTCGSPVRLNQGRQIHSYIVKIGFDKEITVCNSLLTMYTKCSH 419
Query: 60 IGSACQVF-DESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLR 118
+ A VF D S ++++W A+++ ++ E + + +M +G D++T+ ++L
Sbjct: 420 LHDALNVFRDISRNANLVSWNAILSACLQKKQEGETFRLYKEMHFSGNKPDSITITTLLG 479
Query: 119 AAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRD 178
A G VH + +++G + LD V + L+DMY KCG A VFD D
Sbjct: 480 TCAELTSLGVGNQVHCYSIKSGLI-LDVSVCNGLIDMYAKCGSLKHARDVFDST--QNLD 536
Query: 179 VVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQ 238
+V WS L+ GY QC +A+ +F M + V PNE T LSAC+H G +++G +++
Sbjct: 537 IVSWSSLIVGYAQCGLGHEALNLFRIMTNLGVQPNEVTYLGALSACSHIGLVEEGWRLYK 596
Query: 239 YIECKKVSLNSVELGTALVDM 259
+E + + E + +VD+
Sbjct: 597 SMETEHGIPPTREHFSCIVDL 617
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 121/233 (51%), Gaps = 11/233 (4%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
I+ + K + N +I+ + G + A +VFD + ++++WT++I+GY +N
Sbjct: 87 IHDHVLKSNYQPSIILQNHMINMYGKCGSMKDARKVFDTMQLPNVVSWTSMISGYSQNGQ 146
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQA--GRVQLDGYV 148
++A+ +++M +G D LT SV++A +AGD + G+ +H +++ G
Sbjct: 147 ANDAIIMYIQMTRSGQFPDQLTFGSVIKACYIAGDIDLGRQLHAHVIKSWFGHHLTSQ-- 204
Query: 149 WSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSD 208
+AL+ MY G + A VF +P +D++ W ++ GY+Q +A+ +F ++L
Sbjct: 205 -NALISMYTNFGQIEHASNVFTRIP--TKDLISWGTMITGYIQLGYRVEALYLFRDLLRQ 261
Query: 209 NVV-PNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSL-NSVELGTALVDM 259
PNEF SV SAC+ L+ GK VH C K L +V G +L DM
Sbjct: 262 GTYQPNEFIFGSVFSACSSLLELEYGKQVHGM--CVKFGLRRNVFAGCSLCDM 312
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 125/260 (48%), Gaps = 4/260 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPV-VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
+RQ +P++ F + S + +E ++ K G + FAG +L +A GF
Sbjct: 259 LRQGTYQPNEFIFGSVFSACSSLLELEYGKQVHGMCVKFGLRRNVFAGCSLCDMYAKFGF 318
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ SA F + DI++W A+I + N +EA+ F +M G D++T +S+L
Sbjct: 319 LPSAKMAFCQIKNPDIVSWNAIIAAFADNGDANEAIDFFRQMIHIGLTPDSITYISLLCT 378
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
N G+ +H + V+ G + V ++L+ MY KC H DA VF ++ + ++
Sbjct: 379 CGSPVRLNQGRQIHSYIVKIG-FDKEITVCNSLLTMYTKCSHLHDALNVFRDISRN-ANL 436
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQY 239
V W+ +++ +Q + + R++ M P+ T+T++L CA +L G VH Y
Sbjct: 437 VSWNAILSACLQKKQEGETFRLYKEMHFSGNKPDSITITTLLGTCAELTSLGVGNQVHCY 496
Query: 240 IECKKVSLNSVELGTALVDM 259
K + V + L+DM
Sbjct: 497 -SIKSGLILDVSVCNGLIDM 515
>Medtr6g018720.1 | PPR containing plant-like protein | HC |
chr6:7213956-7209580 | 20130731
Length = 535
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 87/281 (30%), Positives = 135/281 (48%), Gaps = 38/281 (13%)
Query: 9 DQHTFPLLLKMF-SKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVF 67
D P LLK S P + ++A+ K G D+D F G A+++A+A G + A +VF
Sbjct: 50 DPTVIPQLLKACDSHPFLPYVKSLHAESIKAGSDVDVFIGTAIVAAYAKCGVVCDARKVF 109
Query: 68 DESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDN 127
D ++ + W A+I GY++N AL F +M G ++ ++ A GD
Sbjct: 110 DLMHERNDVTWNAMIGGYLRNGDAKSALLAFEEM----PGKTRVSWSQMIGGFARNGDTL 165
Query: 128 FGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMP----YSYRDVVC-- 181
+ F+ + D +W+ ++D Y K G +DA +VF+ MP + + +VC
Sbjct: 166 TAR---KFFDKVPYELKDVVIWTMMVDGYAKKGEMEDAREVFELMPERNYFVWSSMVCGY 222
Query: 182 -----------------------WSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLT 218
W+ ++AGYVQ + A+ F M D P+EFT+
Sbjct: 223 CKKGDVMEAEAIFRRIPVRNLEIWNSMIAGYVQNGCGEKALEAFGEMGVDGFEPDEFTVV 282
Query: 219 SVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
SVLSACA G LD GK +H IECK +++N L + L+DM
Sbjct: 283 SVLSACAQLGDLDAGKQMHHMIECKGIAVNQFVL-SGLIDM 322
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 111/208 (53%), Gaps = 3/208 (1%)
Query: 34 QIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSE 93
++F+L + + F ++++ + G + A +F V+++ W ++I GYV+N +
Sbjct: 202 EVFELMPERNYFVWSSMVCGYCKKGDVMEAEAIFRRIPVRNLEIWNSMIAGYVQNGCGEK 261
Query: 94 ALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALM 153
AL+ F +M G D TVVSVL A A GD + GK +H ++ + ++ +V S L+
Sbjct: 262 ALEAFGEMGVDGFEPDEFTVVSVLSACAQLGDLDAGKQMH-HMIECKGIAVNQFVLSGLI 320
Query: 154 DMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPN 213
DMY KCG +A VF+ + R+V CW+ ++AG+ + + + M N+ P+
Sbjct: 321 DMYAKCGDLVNARLVFESC--NERNVFCWNAMIAGFAVNGQCNEVLEYLDRMEESNIRPD 378
Query: 214 EFTLTSVLSACAHSGALDQGKLVHQYIE 241
T +VLSACAH G + + V +E
Sbjct: 379 AVTFITVLSACAHGGLVSEALEVISKME 406
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 89/188 (47%), Gaps = 2/188 (1%)
Query: 5 GVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSA 63
G EPD+ T +L ++ ++ ++ I G +++F + LI +A G + +A
Sbjct: 273 GFEPDEFTVVSVLSACAQLGDLDAGKQMHHMIECKGIAVNQFVLSGLIDMYAKCGDLVNA 332
Query: 64 CQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMA 123
VF+ + +++ W A+I G+ N +E L+ +M + DA+T ++VL A A
Sbjct: 333 RLVFESCNERNVFCWNAMIAGFAVNGQCNEVLEYLDRMEESNIRPDAVTFITVLSACAHG 392
Query: 124 GDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWS 183
G + V + G +++ + ++D+ + G +A ++ MP + V +
Sbjct: 393 GLVSEALEVISKMEEYG-IEMGIRHYGCMVDLLGRAGRLKEAYELIKRMPMKPNETVLGA 451
Query: 184 VLVAGYVQ 191
++ A ++
Sbjct: 452 MIGACWIH 459
>Medtr3g037470.1 | TPR superfamily protein | HC |
chr3:13772234-13768538 | 20130731
Length = 424
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 116/204 (56%), Gaps = 3/204 (1%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
+++ I K G++ +L+ +A G + A QVFDE K+II WT+LI+ YV+N
Sbjct: 98 LHSLIIKFGYESIIQLQTSLLKVYAGGGNLFDAHQVFDEIPEKNIICWTSLISAYVENHK 157
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
++ L+ F M D + + + L A A AG G+W+H F + +++D ++ +
Sbjct: 158 SNKGLELFRLMLMNNVEPDQIVLTTALSACADAGGLEMGEWIHDFVRRKQGMKIDLHLNN 217
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV 210
AL++MY KCG +A K+FD +DV W+ ++ G+ + ++A+++F M + V
Sbjct: 218 ALINMYAKCGDIGNARKLFDNT--RNKDVTTWTSMIVGHAVHGEAREALQLFSEM-NFIV 274
Query: 211 VPNEFTLTSVLSACAHSGALDQGK 234
PN+ T VL AC+H+G +++GK
Sbjct: 275 SPNDVTFIGVLMACSHAGLVEEGK 298
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 94/169 (55%), Gaps = 11/169 (6%)
Query: 96 KCFVKMRS-TGTGVDALTVVSVLRAAAMAGDDN-FGKWVHGFYVQAGR---VQLDGYVWS 150
K ++ +S T +D+ + + L+A GK +H ++ G +QL +
Sbjct: 60 KTLLEQKSPTFNSIDSFSFLYTLKACINKNHSYVLGKQLHSLIIKFGYESIIQLQ----T 115
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV 210
+L+ +Y G+ DA +VFDE+P ++++CW+ L++ YV+ +K + +F ML +NV
Sbjct: 116 SLLKVYAGGGNLFDAHQVFDEIPE--KNIICWTSLISAYVENHKSNKGLELFRLMLMNNV 173
Query: 211 VPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
P++ LT+ LSACA +G L+ G+ +H ++ K+ + L AL++M
Sbjct: 174 EPDQIVLTTALSACADAGGLEMGEWIHDFVRRKQGMKIDLHLNNALINM 222
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 74/152 (48%), Gaps = 2/152 (1%)
Query: 37 KLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALK 96
K G +D NALI+ +A G IG+A ++FD + KD+ WT++I G+ + EAL+
Sbjct: 206 KQGMKIDLHLNNALINMYAKCGDIGNARKLFDNTRNKDVTTWTSMIVGHAVHGEAREALQ 265
Query: 97 CFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMY 156
F +M + D +T + VL A + AG GK + ++ + ++D++
Sbjct: 266 LFSEMNFIVSPND-VTFIGVLMACSHAGLVEEGKRNFRSMNEDYGIEPREPHFGCMVDLF 324
Query: 157 FKCGHCDDACKVFDEMPYSYRDVVCWSVLVAG 188
+ GH +A EMP + V W L+
Sbjct: 325 CRSGHLREAYDFIMEMPVP-PNAVMWRTLLGA 355
>Medtr3g072900.1 | PPR containing plant-like protein | HC |
chr3:32815251-32818532 | 20130731
Length = 745
Score = 121 bits (303), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 131/260 (50%), Gaps = 4/260 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKM-FSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M + GV D +TF ++LK+ + + ++ + G++LD G+ LI +A G
Sbjct: 333 MHRSGVRFDFYTFSIVLKICMNFDNLSLASQVHGFVITSGYELDCVVGSILIDIYAKQGS 392
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
I +A ++F+ KD++AW++LI G + A F+ M G +D + VL+A
Sbjct: 393 INNALRLFERLPDKDVVAWSSLITGCARFGSDKLAFSLFMDMIHLGLQIDHFVISIVLKA 452
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
+ GK VH ++ G + +G V +AL+DMY KCG +DA +F + S D
Sbjct: 453 CSSLASHQHGKQVHSLCLKKG-YESEGVVTTALIDMYAKCGDIEDALSLFGCL--SEIDT 509
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQY 239
+ W+ ++ G Q + ++AI + M+ PN+ T+ VL+AC HSG +++ V
Sbjct: 510 MSWTSIIVGCAQNGRAEEAISLLHKMIESGTKPNKITILGVLTACRHSGLVEEAWDVFNS 569
Query: 240 IECKKVSLNSVELGTALVDM 259
IE + E +VD+
Sbjct: 570 IETNHGLIPCPEHYNCMVDI 589
Score = 107 bits (268), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 134/268 (50%), Gaps = 16/268 (5%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPFM----IYAQIFKLGFDLDRFAGNALISAFAN 56
M KG++ D+ TFP +LK D M I+ I K GF+ + +ALI +++
Sbjct: 227 MHGKGLKMDEFTFPSVLKACG---CSDELMLGREIHCYIIKSGFESSCYCISALIDMYSS 283
Query: 57 SGFIGSACQVFDE----SSVKDIIA-WTALINGYVKNDLPSEALKCFVKMRSTGTGVDAL 111
+ A ++FD+ SSV + +A W ++++G+V N EAL M +G D
Sbjct: 284 CKLLSEATKIFDQYFRNSSVSESLALWNSMLSGHVVNGDYVEALSMISHMHRSGVRFDFY 343
Query: 112 TVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDE 171
T VL+ + + VHGF + +G +LD V S L+D+Y K G ++A ++F+
Sbjct: 344 TFSIVLKICMNFDNLSLASQVHGFVITSG-YELDCVVGSILIDIYAKQGSINNALRLFER 402
Query: 172 MPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALD 231
+P +DVV WS L+ G + + A +F +M+ + + F ++ VL AC+ +
Sbjct: 403 LP--DKDVVAWSSLITGCARFGSDKLAFSLFMDMIHLGLQIDHFVISIVLKACSSLASHQ 460
Query: 232 QGKLVHQYIECKKVSLNSVELGTALVDM 259
GK VH K V + TAL+DM
Sbjct: 461 HGKQVHSLCLKKGYESEGV-VTTALIDM 487
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 127/266 (47%), Gaps = 35/266 (13%)
Query: 25 VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALING 84
+++ +++ I K GF F N +IS ++ I A +FDE ++I++WT +++
Sbjct: 19 IKNAKSLHSHIIKSGFCNHIFILNNMISVYSKCSSIIDARNMFDEMPHRNIVSWTTMVSV 78
Query: 85 YVKNDLPSEALKCFVKM-RSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQ 143
+ +P EAL + +M S + +VL+A + + GK VH +++ ++
Sbjct: 79 LTNSSMPHEALSLYNEMIESKIEQPNQFLYSAVLKACGLVRNVELGKMVH-YHIFQAKLD 137
Query: 144 LDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVF- 202
+D + +AL+DMY KCG DA +VF E+P ++ W+ L+ GY + DA+++F
Sbjct: 138 VDIVLMNALLDMYVKCGSLRDAQRVFCEIP--CKNATSWNTLILGYAKQGLIDDAMKLFD 195
Query: 203 ---------WNMLSDNVVPN--------------------EFTLTSVLSACAHSGALDQG 233
WN + +V N EFT SVL AC S L G
Sbjct: 196 KMPEPDIVSWNSIIAGLVDNASSRALRFVSMMHGKGLKMDEFTFPSVLKACGCSDELMLG 255
Query: 234 KLVHQYIECKKVSLNSVELGTALVDM 259
+ +H YI K +S +AL+DM
Sbjct: 256 REIHCYI-IKSGFESSCYCISALIDM 280
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 127/293 (43%), Gaps = 36/293 (12%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
+ K +P+Q + +LK VE M++ IF+ D+D NAL+ + G
Sbjct: 96 IESKIEQPNQFLYSAVLKACGLVRNVELGKMVHYHIFQAKLDVDIVLMNALLDMYVKCGS 155
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVK------------------- 100
+ A +VF E K+ +W LI GY K L +A+K F K
Sbjct: 156 LRDAQRVFCEIPCKNATSWNTLILGYAKQGLIDDAMKLFDKMPEPDIVSWNSIIAGLVDN 215
Query: 101 -----------MRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVW 149
M G +D T SVL+A + + G+ +H + +++G + Y
Sbjct: 216 ASSRALRFVSMMHGKGLKMDEFTFPSVLKACGCSDELMLGREIHCYIIKSG-FESSCYCI 274
Query: 150 SALMDMYFKCGHCDDACKVFDEM---PYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNML 206
SAL+DMY C +A K+FD+ + W+ +++G+V + +A+ + +M
Sbjct: 275 SALIDMYSSCKLLSEATKIFDQYFRNSSVSESLALWNSMLSGHVVNGDYVEALSMISHMH 334
Query: 207 SDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
V + +T + VL C + L VH ++ L+ V +G+ L+D+
Sbjct: 335 RSGVRFDFYTFSIVLKICMNFDNLSLASQVHGFVITSGYELDCV-VGSILIDI 386
>Medtr5g091640.1 | PPR containing plant-like protein | HC |
chr5:39962522-39960655 | 20130731
Length = 542
Score = 121 bits (303), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 121/221 (54%), Gaps = 4/221 (1%)
Query: 40 FDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFV 99
+D D A N++I +A G I + +FD+ + ++W ++I+GYV+N EAL+ F
Sbjct: 193 YDHDVVAINSMIMGYAKCGEIDESRNLFDDMITRTSVSWNSMISGYVRNGKLMEALELFN 252
Query: 100 KMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKC 159
KM+ G V T+VS+L A A G GKWVH Y++ +L+ V +A++DMY KC
Sbjct: 253 KMQVEGFEVSEFTMVSLLNACAHLGALQHGKWVHD-YIKRNHFELNVIVVTAIIDMYCKC 311
Query: 160 GHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVV-PNEFTLT 218
G ++A +VF+ P R + CW+ ++ G ++A F + S ++ P+ +
Sbjct: 312 GSVENAVEVFETCP--RRGLSCWNSIIIGLAMNGHEREAFEFFSKLESSKLLKPDSVSFI 369
Query: 219 SVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
VL+AC H GA+++ + + + K S++ T +VD+
Sbjct: 370 GVLTACKHLGAINKARDYFELMMNKYEIEPSIKHYTCIVDV 410
>Medtr7g053240.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:18723182-18719939 | 20130731
Length = 881
Score = 121 bits (303), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 110/203 (54%), Gaps = 3/203 (1%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
I+ F+LG + G AL++ ++ G + A +VFD KD A ++L++GY +N L
Sbjct: 559 IHGSTFRLGLGTNTVVGGALVNMYSKCGSLSLARKVFDILPHKDAFACSSLVSGYAQNGL 618
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
E+ F M VDA T+ S+L AA++ + G +H Y++ +Q D V S
Sbjct: 619 IEESFLLFHDMLRNDETVDAFTITSILGAASLLCQSDIGTQLHA-YIEKLGLQADVSVGS 677
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV 210
+L+ MY KCG +D K FD++ D++ W+ L+ Y Q K DA+ + M S+ V
Sbjct: 678 SLLTMYSKCGSIEDCRKAFDDVEKP--DLIGWTSLILSYAQHGKGADALAAYELMKSEGV 735
Query: 211 VPNEFTLTSVLSACAHSGALDQG 233
P+ T +LSAC+HSG +++
Sbjct: 736 EPDAVTFVGILSACSHSGLVEEA 758
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 144/260 (55%), Gaps = 8/260 (3%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFI 60
M ++GV+PD++ LL + S + +++ I K G + G +L + ++ G +
Sbjct: 430 MLREGVKPDEYCIGSLLSIMSSLSLGS--QVHSYILKAGLVTNATVGCSLFTMYSKCGCL 487
Query: 61 GSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAA 120
+ +VF ++ VKD ++W ++I+G+V++ P +AL+ F +M D +T++S+L A
Sbjct: 488 EESYEVFQQAIVKDNVSWASMISGFVEHGYPDQALRLFKEMLYQEVVPDHITLISILTAC 547
Query: 121 AMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVV 180
A G+ +HG + G + + V AL++MY KCG A KVFD +P ++D
Sbjct: 548 ADLRLLRTGREIHGSTFRLG-LGTNTVVGGALVNMYSKCGSLSLARKVFDILP--HKDAF 604
Query: 181 CWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYI 240
S LV+GY Q +++ +F +ML ++ + FT+TS+L A + D G +H YI
Sbjct: 605 ACSSLVSGYAQNGLIEESFLLFHDMLRNDETVDAFTITSILGAASLLCQSDIGTQLHAYI 664
Query: 241 ECKKVSLNS-VELGTALVDM 259
E K+ L + V +G++L+ M
Sbjct: 665 E--KLGLQADVSVGSSLLTM 682
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 133/263 (50%), Gaps = 12/263 (4%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPFMIYAQIFKL----GFDLDRFAGNALISAFAN 56
M G EPD+ ++ +L S V M Q+F L GF + ++ F
Sbjct: 127 MHLFGFEPDEFSYGSVL---SACVALQASMFGLQVFSLVVKNGFLSSGYVQTQMVDMFCK 183
Query: 57 SGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSV 116
+ A + F+++S ++ +W A+I+ VKN AL F +M ++ T S+
Sbjct: 184 NCNFSEALRFFNDASCDNVASWNAIISLAVKNGENQVALNLFSEMCRASLMPNSYTFPSI 243
Query: 117 LRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSY 176
L A + GK VHG ++ G D +V +A++D+Y K G +A + F +M
Sbjct: 244 LTACCALKEMQIGKGVHGLAIKCGAT--DVFVETAIVDLYAKFGCMSEAYRQFSQM--QV 299
Query: 177 RDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLV 236
++VV W+ +++G+VQ + A+++F +M N +T+TSVLSACA +++ K +
Sbjct: 300 QNVVSWTAIISGFVQQDDTTFALKLFKDMRQIGHEINAYTVTSVLSACAKPELIEEAKQI 359
Query: 237 HQYIECKKVSLNSVELGTALVDM 259
H + + LN V++G ALV+M
Sbjct: 360 HSLVLKLGLILN-VKVGAALVNM 381
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 122/241 (50%), Gaps = 7/241 (2%)
Query: 1 MRQKGVEPDQHTFP-LLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M + + P+ +TFP +L + ++ ++ K G D F A++ +A G
Sbjct: 228 MCRASLMPNSYTFPSILTACCALKEMQIGKGVHGLAIKCG-ATDVFVETAIVDLYAKFGC 286
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ A + F + V+++++WTA+I+G+V+ D + ALK F MR G ++A TV SVL A
Sbjct: 287 MSEAYRQFSQMQVQNVVSWTAIISGFVQQDDTTFALKLFKDMRQIGHEINAYTVTSVLSA 346
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
A K +H ++ G + L+ V +AL++MY K G + F EM + +D
Sbjct: 347 CAKPELIEEAKQIHSLVLKLGLI-LNVKVGAALVNMYAKIGGVGLSELAFSEMK-NMKDP 404
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQY 239
W+ +++ + Q A+ +F ML + V P+E+ + S+LS + Q VH Y
Sbjct: 405 GIWASMLSSFAQNRNSGRALELFTVMLREGVKPDEYCIGSLLSIMSSLSLGSQ---VHSY 461
Query: 240 I 240
I
Sbjct: 462 I 462
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 111/216 (51%), Gaps = 7/216 (3%)
Query: 45 FAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRST 104
F ++LI + S + A ++FD + I++W +I+GYV+N + ++L+ F +M
Sbjct: 71 FFMDSLIGLYCKSSDMVLAHKLFDTITQPSIVSWNVMISGYVRNSMFLKSLEMFCRMHLF 130
Query: 105 GTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDD 164
G D + SVL A FG V V+ G + GYV + ++DM+ K + +
Sbjct: 131 GFEPDEFSYGSVLSACVALQASMFGLQVFSLVVKNGFLS-SGYVQTQMVDMFCKNCNFSE 189
Query: 165 ACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSAC 224
A + F++ S +V W+ +++ V+ + Q A+ +F M +++PN +T S+L+AC
Sbjct: 190 ALRFFNDA--SCDNVASWNAIISLAVKNGENQVALNLFSEMCRASLMPNSYTFPSILTAC 247
Query: 225 AHSGALDQGKLVHQY-IECKKVSLNSVELGTALVDM 259
+ GK VH I+C V + TA+VD+
Sbjct: 248 CALKEMQIGKGVHGLAIKCGA---TDVFVETAIVDL 280
>Medtr7g078360.1 | PPR containing plant-like protein | HC |
chr7:29634869-29632890 | 20130731
Length = 632
Score = 121 bits (303), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 114/196 (58%), Gaps = 5/196 (2%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRST--G 105
NA+ISA+A G + SA +FD+ +D ++W ++I GY +N +A+K F +M S+
Sbjct: 326 NAMISAYARVGDLPSAKHLFDKMPQRDTVSWNSMIAGYTQNGESFKAIKLFEEMISSEDS 385
Query: 106 TGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDA 165
D +T+VSV A G+ G W ++ +Q+ V+++L++MY +CG DA
Sbjct: 386 RKPDEVTMVSVFSACGHLGELGLGNWAVSI-LKVNHIQISISVYNSLINMYSRCGSMQDA 444
Query: 166 CKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACA 225
+F EM + RD+V ++ L++G+ + ++I + M D + P+ T ++L+AC+
Sbjct: 445 VLIFQEM--ATRDLVSYNTLISGFAEHGHGMESIELLSKMKEDGIEPDRITYIAILTACS 502
Query: 226 HSGALDQGKLVHQYIE 241
H+G LD+G+ + + I+
Sbjct: 503 HAGLLDEGQRLFESIK 518
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 115/247 (46%), Gaps = 36/247 (14%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGT- 106
+I+ A G + +A FD+ + +++W A+++GY + P E ++ F M S G
Sbjct: 189 TTMITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNV 248
Query: 107 GVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDAC 166
D T +V+ + + GD + + + + +V +AL+DM+ KCG+ + A
Sbjct: 249 QPDETTWATVISSCSSLGDPCLSESIVRKLDDKVGFRPNYFVKTALLDMHAKCGNLEAAH 308
Query: 167 KVFDEMP-YSYR-------------------------------DVVCWSVLVAGYVQCNK 194
K+F+++ Y YR D V W+ ++AGY Q +
Sbjct: 309 KIFEQLGVYKYRSSVPWNAMISAYARVGDLPSAKHLFDKMPQRDTVSWNSMIAGYTQNGE 368
Query: 195 FQDAIRVFWNMLS--DNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVEL 252
AI++F M+S D+ P+E T+ SV SAC H G L G ++ + + S+ +
Sbjct: 369 SFKAIKLFEEMISSEDSRKPDEVTMVSVFSACGHLGELGLGNWAVSILKVNHIQI-SISV 427
Query: 253 GTALVDM 259
+L++M
Sbjct: 428 YNSLINM 434
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 102/224 (45%), Gaps = 43/224 (19%)
Query: 6 VEPDQHTFPLLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQ 65
++P+ + +++K + + A + K G+D D + N ++ +A G I A +
Sbjct: 85 IKPNASFYSVMMK----SAGSESMLFLAHVLKSGYDRDHYVRNGILGIYAKYGPIEFARK 140
Query: 66 VFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGD 125
+FDE + + W +I+GY KC G +A T+ V+ GD
Sbjct: 141 LFDEMPDRTVADWNVMISGY---------WKC-------GNEEEASTLFHVM------GD 178
Query: 126 DNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVL 185
+ V W+ ++ + K G+ A FD+MP R VV W+ +
Sbjct: 179 QEISRNV--------------ITWTTMITGHAKKGNLKTARMYFDKMP--ERSVVSWNAM 222
Query: 186 VAGYVQCNKFQDAIRVFWNMLSD-NVVPNEFTLTSVLSACAHSG 228
++GY Q ++ IR+F +MLS NV P+E T +V+S+C+ G
Sbjct: 223 LSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWATVISSCSSLG 266
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 73/144 (50%), Gaps = 5/144 (3%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTG 107
N+LI+ ++ G + A +F E + +D++++ LI+G+ ++ E+++ KM+ G
Sbjct: 429 NSLINMYSRCGSMQDAVLIFQEMATRDLVSYNTLISGFAEHGHGMESIELLSKMKEDGIE 488
Query: 108 VDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACK 167
D +T +++L A + AG + G+ + +D Y + ++DM + G ++A K
Sbjct: 489 PDRITYIAILTACSHAGLLDEGQ---RLFESIKFPDVDHY--ACMIDMLGRAGRLEEAMK 543
Query: 168 VFDEMPYSYRDVVCWSVLVAGYVQ 191
+ MP + S+L A +
Sbjct: 544 LIQSMPMEPHAGIYGSLLNATSIH 567
>Medtr1g114220.1 | PPR containing plant-like protein | HC |
chr1:51543346-51541694 | 20130731
Length = 550
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/239 (33%), Positives = 118/239 (49%), Gaps = 35/239 (14%)
Query: 52 SAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDAL 111
SA +NSG I + +VF + S I +W +I GY + P +L F+KM G D L
Sbjct: 56 SALSNSGDIDYSYRVFSQISSPTIFSWNIIIRGYSNSKNPIHSLSIFLKMLRHGVAPDYL 115
Query: 112 TVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYV----------------------- 148
T +++A+A G VH ++ G + D ++
Sbjct: 116 TYPFLVKASARLSKQKSGVSVHAQIIKTGH-ESDRFIQNSLIHMYASCGNIMWAHKVFES 174
Query: 149 --------WSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIR 200
W++++D Y KCG A KVF+ M RDV WS + GYV+ ++++A+
Sbjct: 175 MQGKNLVSWNSMLDGYAKCGEMAMAQKVFESM--QERDVRSWSSFIDGYVKAGEYREAMA 232
Query: 201 VFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
VF M + NE T+ SVLSACAH GAL +G+++HQYI + + V L T+LVDM
Sbjct: 233 VFEKMRAVGPKANEVTMVSVLSACAHLGALQKGRMMHQYIIDNLLPMTMV-LQTSLVDM 290
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 128/265 (48%), Gaps = 33/265 (12%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDP-FMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M + GV PD T+P L+K ++ + ++AQI K G + DRF N+LI +A+ G
Sbjct: 105 MLRHGVAPDYLTYPFLVKASARLSKQKSGVSVHAQIIKTGHESDRFIQNSLIHMYASCGN 164
Query: 60 I-------------------------------GSACQVFDESSVKDIIAWTALINGYVKN 88
I A +VF+ +D+ +W++ I+GYVK
Sbjct: 165 IMWAHKVFESMQGKNLVSWNSMLDGYAKCGEMAMAQKVFESMQERDVRSWSSFIDGYVKA 224
Query: 89 DLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYV 148
EA+ F KMR+ G + +T+VSVL A A G G+ +H Y+ + + +
Sbjct: 225 GEYREAMAVFEKMRAVGPKANEVTMVSVLSACAHLGALQKGRMMHQ-YIIDNLLPMTMVL 283
Query: 149 WSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSD 208
++L+DMY KCG ++A VF + S DV W+ ++ G ++++++F M
Sbjct: 284 QTSLVDMYAKCGAIEEALFVFRGISKSQTDVFIWNAMIGGLATHGLVEESLKLFKEMQMA 343
Query: 209 NVVPNEFTLTSVLSACAHSGALDQG 233
+ +E T +L+ACAH G + +
Sbjct: 344 GIRSDEITYLCLLAACAHGGLVKEA 368
>Medtr6g060510.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:20818019-20812038 | 20130731
Length = 1056
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 119/220 (54%), Gaps = 7/220 (3%)
Query: 16 LLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKD 74
L+ MF K VED +F D D ++ N +I A+ SG + A ++FDE +D
Sbjct: 152 LIGMFGKWGRVEDA----RNVFDSAVDRDFYSWNTMIGAYVGSGNMVLAKELFDEMHERD 207
Query: 75 IIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHG 134
+++W+ +I GYV+ EAL F KM + + T+VS L A + + GKW+H
Sbjct: 208 VVSWSTIIAGYVQVGCFMEALDFFHKMLQSEVKPNEYTMVSALAACSNLVALDQGKWIH- 266
Query: 135 FYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNK 194
Y++ ++++ + ++L+DMY KCG D A VF E R V W+ ++ G+ K
Sbjct: 267 VYIRRDNIKMNDRLLASLIDMYAKCGEIDSASSVFHEHKVK-RKVWPWNAMIGGFAMHGK 325
Query: 195 FQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGK 234
++AI VF M + V PN+ T ++L+AC+H + +GK
Sbjct: 326 PEEAINVFEKMKVEKVSPNKVTFIALLNACSHGYMVKEGK 365
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 77/138 (55%), Gaps = 12/138 (8%)
Query: 128 FGKWVHGFYVQAGR------VQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVC 181
FGKW V+ R V D Y W+ ++ Y G+ A ++FDEM RDVV
Sbjct: 156 FGKWGR---VEDARNVFDSAVDRDFYSWNTMIGAYVGSGNMVLAKELFDEM--HERDVVS 210
Query: 182 WSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIE 241
WS ++AGYVQ F +A+ F ML V PNE+T+ S L+AC++ ALDQGK +H YI
Sbjct: 211 WSTIIAGYVQVGCFMEALDFFHKMLQSEVKPNEYTMVSALAACSNLVALDQGKWIHVYIR 270
Query: 242 CKKVSLNSVELGTALVDM 259
+ +N L +L+DM
Sbjct: 271 RDNIKMND-RLLASLIDM 287
>Medtr7g092100.1 | RNAediting factor 1 | HC | chr7:36467361-36465331
| 20130731
Length = 596
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 118/225 (52%), Gaps = 6/225 (2%)
Query: 15 LLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKD 74
LL FS+ + + ++A I KLG + LI+ ++ + S+ Q+F +S K
Sbjct: 27 LLSLTFSRSLPKG-LQLHAHIIKLGLQTIPLLSHHLINFYSKTHLPYSSLQIFHDSPHKS 85
Query: 75 IIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHG 134
W+++I+ + +NDLP +L F M G D S ++ + K +H
Sbjct: 86 ATTWSSVISSFAQNDLPLLSLNYFRLMLRQGVPPDDHIFPSATKSCGILSSLPVAKMLHC 145
Query: 135 FYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNK 194
F ++ LD +V S+++DMY KCG A VFDEMP YR+VV WS L+ GYVQ +
Sbjct: 146 FALKTA-YHLDIFVGSSVIDMYAKCGDICYAHNVFDEMP--YRNVVSWSGLIYGYVQLGE 202
Query: 195 FQDAIRVFWNML--SDNVVPNEFTLTSVLSACAHSGALDQGKLVH 237
+++R+F L +N N+FTL+SVL C S L G+L+H
Sbjct: 203 DDESLRLFKRFLVEEENEGVNDFTLSSVLRVCGGSTLLQMGRLIH 247
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 122/241 (50%), Gaps = 13/241 (5%)
Query: 1 MRQKGVEPDQHTFPLLLK----MFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFAN 56
M ++GV PD H FP K + S PV + M++ K + LD F G+++I +A
Sbjct: 112 MLRQGVPPDDHIFPSATKSCGILSSLPVAK---MLHCFALKTAYHLDIFVGSSVIDMYAK 168
Query: 57 SGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVK--MRSTGTGVDALTVV 114
G I A VFDE +++++W+ LI GYV+ E+L+ F + + GV+ T+
Sbjct: 169 CGDICYAHNVFDEMPYRNVVSWSGLIYGYVQLGEDDESLRLFKRFLVEEENEGVNDFTLS 228
Query: 115 SVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPY 174
SVLR + G+ +HG + +V S+L+ +Y KCG ++A VF+E+
Sbjct: 229 SVLRVCGGSTLLQMGRLIHGLSFKTS-FDSSCFVASSLISLYSKCGVVEEAYDVFEEV-- 285
Query: 175 SYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLS-DNVVPNEFTLTSVLSACAHSGALDQG 233
+ R++ W+ ++ Q +F M S + N T VL AC+H+G +++G
Sbjct: 286 TVRNLGMWNAMLIACAQHAHTDKTFELFDKMKSVGGMKANFITFLCVLYACSHAGLVEKG 345
Query: 234 K 234
K
Sbjct: 346 K 346
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 5/161 (3%)
Query: 30 MIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKND 89
+I+ FK FD F ++LIS ++ G + A VF+E +V+++ W A++ ++
Sbjct: 245 LIHGLSFKTSFDSSCFVASSLISLYSKCGVVEEAYDVFEEVTVRNLGMWNAMLIACAQHA 304
Query: 90 LPSEALKCFVKMRSTGTGVDA--LTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGY 147
+ + F KM+S G G+ A +T + VL A + AG GK+ G ++
Sbjct: 305 HTDKTFELFDKMKSVG-GMKANFITFLCVLYACSHAGLVEKGKYYFELMKDYG-IEPGTQ 362
Query: 148 VWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAG 188
+S ++D+ + G +DA K+ +EMP + V W L+ G
Sbjct: 363 HYSTMVDLLGRAGKLNDAVKLIEEMPMEPTESV-WGALLTG 402
>Medtr2g087120.1 | PPR containing plant-like protein | HC |
chr2:36618951-36617398 | 20130731
Length = 517
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 119/212 (56%), Gaps = 3/212 (1%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTG 107
N +I + +G + A ++FD+ VK++++WT +I G+VK + EAL+CF +M+ G
Sbjct: 161 NTMIDGYMKNGDVDDALKLFDKLPVKNVVSWTVVIGGFVKKECYEEALECFREMQLAGVV 220
Query: 108 VDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACK 167
D +TV++++ A A G G WVH V + + V ++L+DMY +CG + A +
Sbjct: 221 PDFVTVIAIISACANLGALGLGLWVHRL-VMKKEFRDNVKVLNSLIDMYARCGCIELARQ 279
Query: 168 VFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHS 227
VFD M S R++V W+ ++ G+ A+ F +M + + PN + TS L+AC+H+
Sbjct: 280 VFDGM--SQRNLVSWNSIIVGFAVNGLADKALSFFRSMKKEGLEPNGVSYTSALTACSHA 337
Query: 228 GALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
G +D+G + I+ + +E LVD+
Sbjct: 338 GLIDEGLKIFADIKRDHRNSPRIEHYGCLVDL 369
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 110/218 (50%), Gaps = 37/218 (16%)
Query: 76 IAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDN---FGKWV 132
++WT+ I+ + KN+ +A F++M + +T++++L A A + FG +
Sbjct: 53 VSWTSSISHHCKNNNFLKAASEFIQMLEAEVEPNHITLITLLSACAHSPSKTSITFGAAL 112
Query: 133 HGFYVQAGRVQLDGYVWSALMDMYFKCGH------------------------------- 161
H + G D V +AL+DMY KCG
Sbjct: 113 HTHAFKHGFAMNDVMVGTALIDMYAKCGKLDYARLVFDQMGVRNLVSWNTMIDGYMKNGD 172
Query: 162 CDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVL 221
DDA K+FD++P ++VV W+V++ G+V+ +++A+ F M VVP+ T+ +++
Sbjct: 173 VDDALKLFDKLP--VKNVVSWTVVIGGFVKKECYEEALECFREMQLAGVVPDFVTVIAII 230
Query: 222 SACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
SACA+ GAL G VH+ + KK ++V++ +L+DM
Sbjct: 231 SACANLGALGLGLWVHRLV-MKKEFRDNVKVLNSLIDM 267
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 70/144 (48%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTG 107
N+LI +A G I A QVFD S +++++W ++I G+ N L +AL F M+ G
Sbjct: 262 NSLIDMYARCGCIELARQVFDGMSQRNLVSWNSIIVGFAVNGLADKALSFFRSMKKEGLE 321
Query: 108 VDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACK 167
+ ++ S L A + AG + G + + R + L+D+Y + G +A
Sbjct: 322 PNGVSYTSALTACSHAGLIDEGLKIFADIKRDHRNSPRIEHYGCLVDLYSRAGRLKEAWD 381
Query: 168 VFDEMPYSYRDVVCWSVLVAGYVQ 191
V +MP +VV S+L A Q
Sbjct: 382 VIKKMPMMPNEVVLGSLLAACRTQ 405
>Medtr5g008600.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:1841187-1847304 | 20130731
Length = 880
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 112/194 (57%), Gaps = 4/194 (2%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRST-GT 106
N +IS +AN G I A ++FDE +D +W A+I+GYV EAL F M+ +
Sbjct: 133 NTMISGYANVGRIEQARKLFDEMPHRDNFSWNAVISGYVSQGWYMEALDLFRMMQENESS 192
Query: 107 GVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDAC 166
+ T+ S L AAA GK +HG+ +++G ++LD VW+AL+D+Y KCG ++A
Sbjct: 193 NCNMFTLSSALAAAAAISSLRRGKEIHGYLIRSG-LELDEVVWTALLDLYGKCGSLNEAR 251
Query: 167 KVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAH 226
+FD+M + +D+V W+ ++ + + ++ +F +++ V PNE+T VL+ACA
Sbjct: 252 GIFDQM--ADKDIVSWTTMIHRCFEDGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNACAD 309
Query: 227 SGALDQGKLVHQYI 240
A GK VH Y+
Sbjct: 310 LAAEQMGKEVHGYM 323
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 105/203 (51%), Gaps = 3/203 (1%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
I+ + + G +LD AL+ + G + A +FD+ + KDI++WT +I+ ++
Sbjct: 218 IHGYLIRSGLELDEVVWTALLDLYGKCGSLNEARGIFDQMADKDIVSWTTMIHRCFEDGR 277
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
E F + +G + T VL A A + GK VHG+ + G + S
Sbjct: 278 KKEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGKEVHGYMTRVGYDPFS-FAAS 336
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV 210
AL+ +Y KCG+ + A +VF++MP D+V W+ L+ GY Q + A++ F ++L
Sbjct: 337 ALVHVYSKCGNTETARRVFNQMPRP--DLVSWTSLIVGYAQNGQPDMALQFFESLLRSGT 394
Query: 211 VPNEFTLTSVLSACAHSGALDQG 233
P+E T VLSAC H+G +D G
Sbjct: 395 KPDEITFVGVLSACTHAGLVDIG 417
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 96/186 (51%), Gaps = 4/186 (2%)
Query: 5 GVEPDQHTFPLLLKMFSKPVVED-PFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSA 63
GV P+++TF +L + E ++ + ++G+D FA +AL+ ++ G +A
Sbjct: 292 GVRPNEYTFAGVLNACADLAAEQMGKEVHGYMTRVGYDPFSFAASALVHVYSKCGNTETA 351
Query: 64 CQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMA 123
+VF++ D+++WT+LI GY +N P AL+ F + +GT D +T V VL A A
Sbjct: 352 RRVFNQMPRPDLVSWTSLIVGYAQNGQPDMALQFFESLLRSGTKPDEITFVGVLSACTHA 411
Query: 124 GDDNFG-KWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCW 182
G + G ++ H + G V + ++ ++D+ + G +A + D MP D W
Sbjct: 412 GLVDIGLEYFHSVKEKHGLVHTADH-YACVIDLLARSGRFKEAENIIDNMPMK-PDKFLW 469
Query: 183 SVLVAG 188
+ L+ G
Sbjct: 470 ASLLGG 475
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 68/119 (57%), Gaps = 6/119 (5%)
Query: 143 QLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVF 202
Q D W+ ++ Y G + A K+FDEMP+ RD W+ +++GYV + +A+ +F
Sbjct: 126 QKDLCSWNTMISGYANVGRIEQARKLFDEMPH--RDNFSWNAVISGYVSQGWYMEALDLF 183
Query: 203 WNMLSDNVVPN--EFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
M+ +N N FTL+S L+A A +L +GK +H Y+ + L+ V + TAL+D+
Sbjct: 184 -RMMQENESSNCNMFTLSSALAAAAAISSLRRGKEIHGYLIRSGLELDEV-VWTALLDL 240
>Medtr2g009760.1 | PPR containing plant-like protein | HC |
chr2:2078277-2080236 | 20130731
Length = 622
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 139/261 (53%), Gaps = 5/261 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKP-VVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSG- 58
M+ +GV P++ T LL ++P V+ I+ F+ GFD ALI + G
Sbjct: 264 MQVEGVSPNRVTLIALLAACARPGFVKYGKEIHGYAFRRGFDSCHSFSPALIYLYCECGQ 323
Query: 59 FIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLR 118
+ A ++F+ SS++D++ W+++I Y + +ALK F KMR+ T + +T+++V+
Sbjct: 324 SLHLAERIFEGSSLRDVVLWSSIIGSYARRGESDKALKLFNKMRTEETEPNYVTLLAVIS 383
Query: 119 AAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRD 178
A G +HG+ ++ G + +V +AL++MY KCG DD+ K+F EMP RD
Sbjct: 384 ACTNLSSFKHGGVIHGYILKFG-IGFSIFVCNALINMYAKCGSLDDSRKIFLEMP--SRD 440
Query: 179 VVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQ 238
V W+ +++ Y + A++ F+ M V + T +VLSAC H+G + +G+ + +
Sbjct: 441 SVTWNSMISAYGLHGYGEQALQHFYEMKERGVKLDAVTFLAVLSACNHAGLVTEGQQLFE 500
Query: 239 YIECKKVSLNSVELGTALVDM 259
+ ++E L+D+
Sbjct: 501 QVNADCEIPITIEHYACLIDL 521
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 105/211 (49%), Gaps = 12/211 (5%)
Query: 36 FKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEAL 95
F G D N++IS +A I SA QVFD +D I W ++IN Y++N L EAL
Sbjct: 93 FITGSYTDPIVSNSIISMYAKFFDIESARQVFDTMPHRDTITWNSMINAYLQNGLLVEAL 152
Query: 96 KCFVKMRSTGTGVDALTVVSVLRAAAMAGDD-----NFGKWVHGFYVQAGRVQLDGYVW- 149
+ G + S++ +M G + G+ +HG V GR+++ V+
Sbjct: 153 QMLKDFYFLGFLPKPELLASMV---SMCGREMDLGWRIGRQIHGLVVVDGRIRIQHSVFL 209
Query: 150 -SALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSD 208
+A +D YF+CG A VFDEM ++ V W+ +++G + A+ + M +
Sbjct: 210 STAFVDFYFRCGDSLMARSVFDEM--EVKNEVSWTAVISGCANNQDYDVALACYREMQVE 267
Query: 209 NVVPNEFTLTSVLSACAHSGALDQGKLVHQY 239
V PN TL ++L+ACA G + GK +H Y
Sbjct: 268 GVSPNRVTLIALLAACARPGFVKYGKEIHGY 298
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 103/197 (52%), Gaps = 4/197 (2%)
Query: 45 FAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRST 104
F A + + G A VFDE VK+ ++WTA+I+G N AL C+ +M+
Sbjct: 208 FLSTAFVDFYFRCGDSLMARSVFDEMEVKNEVSWTAVISGCANNQDYDVALACYREMQVE 267
Query: 105 GTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHC-D 163
G + +T++++L A A G +GK +HG+ + G + AL+ +Y +CG
Sbjct: 268 GVSPNRVTLIALLAACARPGFVKYGKEIHGYAFRRGFDSCHSFS-PALIYLYCECGQSLH 326
Query: 164 DACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSA 223
A ++F+ S RDVV WS ++ Y + + A+++F M ++ PN TL +V+SA
Sbjct: 327 LAERIFE--GSSLRDVVLWSSIIGSYARRGESDKALKLFNKMRTEETEPNYVTLLAVISA 384
Query: 224 CAHSGALDQGKLVHQYI 240
C + + G ++H YI
Sbjct: 385 CTNLSSFKHGGVIHGYI 401
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 91/191 (47%), Gaps = 8/191 (4%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPF----MIYAQIFKLGFDLDRFAGNALISAFAN 56
MR + EP+ T LL + S F +I+ I K G F NALI+ +A
Sbjct: 366 MRTEETEPNYVT---LLAVISACTNLSSFKHGGVIHGYILKFGIGFSIFVCNALINMYAK 422
Query: 57 SGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSV 116
G + + ++F E +D + W ++I+ Y + +AL+ F +M+ G +DA+T ++V
Sbjct: 423 CGSLDDSRKIFLEMPSRDSVTWNSMISAYGLHGYGEQALQHFYEMKERGVKLDAVTFLAV 482
Query: 117 LRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSY 176
L A AG G+ + + + ++ L+D++ + G +DA ++ MP
Sbjct: 483 LSACNHAGLVTEGQQLFEQVNADCEIPITIEHYACLIDLHGRSGKLEDALEILRTMPMKP 542
Query: 177 RDVVCWSVLVA 187
+ WS LV+
Sbjct: 543 SARI-WSSLVS 552
>Medtr1g111020.2 | pentatricopeptide (PPR) repeat protein | HC |
chr1:50134416-50129873 | 20130731
Length = 860
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 128/242 (52%), Gaps = 7/242 (2%)
Query: 1 MRQKGVEPDQHTFPLLLK-MFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
+ + ++ +Q T +LK + S ++ I+ K G D + N+L+ +
Sbjct: 378 LHHENIDFNQTTLSTVLKSVASLQQIKVCKQIHTLSIKCGIYSDFYVINSLLDTYGKCSH 437
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
I A ++F+E + +D++A+T++I Y ++ EALK +++M+ D S+L A
Sbjct: 438 IDEASKIFEERTWEDLVAYTSMITAYSQHGDAEEALKLYLQMQVADIKPDPFVCSSLLNA 497
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
A GK +H ++ G + D + ++L++MY KCG +DA + F E+P R +
Sbjct: 498 CANLSAYEQGKQLHVHAIKFGFMS-DIFASNSLVNMYAKCGSIEDADRAFSEIPQ--RGI 554
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQY 239
V WS ++ G Q ++A+ +F ML D V PN TL SVL AC H+G +++GK QY
Sbjct: 555 VSWSAMIGGLAQHGHGKEALIMFNQMLKDCVSPNHITLVSVLCACNHAGLVNEGK---QY 611
Query: 240 IE 241
E
Sbjct: 612 FE 613
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 74/230 (32%), Positives = 122/230 (53%), Gaps = 5/230 (2%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSV-KDIIAWTALINGYVKND 89
++ + K GF N L++ ++NS G AC + D+S+ + +++W+ALI+ YV+N
Sbjct: 3 LHTHLIKFGFSRHSSLRNHLLTFYSNSRRFGYACNLLDQSTEPRTVVSWSALISRYVQNG 62
Query: 90 LPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVW 149
EAL F +M + G + T +VL+A ++ D N GK VH V +G + D +V
Sbjct: 63 FHKEALLAFNEMCTLGVKSNEFTFPTVLKACSIKKDLNMGKKVHAMTVVSG-FESDAFVS 121
Query: 150 SALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDN 209
+ L+ MY KCG D+ K+F + VV W+ L + +VQ + + + +F M+
Sbjct: 122 NTLVVMYAKCGQFSDSKKLFGMILEP--GVVSWNALFSCHVQSDFLAETVDLFKRMVEGK 179
Query: 210 VVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
V PNE++L+ +L+ACA G+ VH + L+ ALVDM
Sbjct: 180 VRPNEYSLSIILNACAGLRDGGIGRTVHGLLMKLGHGLDQFS-ANALVDM 228
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 136/256 (53%), Gaps = 16/256 (6%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPFM---IYAQIFKLGFDLDRFAGNALISAFANS 57
M + V P++++ ++L + + D + ++ + KLG LD+F+ NAL+ +A +
Sbjct: 175 MVEGKVRPNEYSLSIILNACAG--LRDGGIGRTVHGLLMKLGHGLDQFSANALVDMYAKA 232
Query: 58 GFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVL 117
G I A VF E D ++W A+I G V ++ AL +M+ +G+ + T+ S L
Sbjct: 233 GRIEDAVDVFREMIHPDTVSWNAIIAGCVLHEYNDLALILLNEMKKSGSCPNVFTLSSAL 292
Query: 118 RAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYR 177
+A A G + G+ +H V+ D +V L+D+Y KC DDA + +D MP +
Sbjct: 293 KACAAMGLKDLGRQIHSCSVKIDS-DSDLFVAVGLIDLYSKCEMMDDARRAYDLMP-TKD 350
Query: 178 DVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVH 237
++ + L++GY QC + AI +F+ + +N+ N+ TL++VL + A +L Q K+
Sbjct: 351 HIIAGNALISGYSQCGDDEQAISLFFELHHENIDFNQTTLSTVLKSVA---SLQQIKV-- 405
Query: 238 QYIECKKVSLNSVELG 253
CK++ S++ G
Sbjct: 406 ----CKQIHTLSIKCG 417
Score = 110 bits (276), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 121/237 (51%), Gaps = 10/237 (4%)
Query: 5 GVEPDQHTFPLLLKMFSKPVVEDPFM---IYAQIFKLGFDLDRFAGNALISAFANSGFIG 61
GV+ ++ TFP +LK S + +D M ++A GF+ D F N L+ +A G
Sbjct: 78 GVKSNEFTFPTVLKACS--IKKDLNMGKKVHAMTVVSGFESDAFVSNTLVVMYAKCGQFS 135
Query: 62 SACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAA 121
+ ++F +++W AL + +V++D +E + F +M + ++ +L A A
Sbjct: 136 DSKKLFGMILEPGVVSWNALFSCHVQSDFLAETVDLFKRMVEGKVRPNEYSLSIILNACA 195
Query: 122 MAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVC 181
D G+ VHG ++ G LD + +AL+DMY K G +DA VF EM + D V
Sbjct: 196 GLRDGGIGRTVHGLLMKLGH-GLDQFSANALVDMYAKAGRIEDAVDVFREMIHP--DTVS 252
Query: 182 WSVLVAGYVQCNKFQDAIRVFWN-MLSDNVVPNEFTLTSVLSACAHSGALDQGKLVH 237
W+ ++AG V +++ D + N M PN FTL+S L ACA G D G+ +H
Sbjct: 253 WNAIIAGCV-LHEYNDLALILLNEMKKSGSCPNVFTLSSALKACAAMGLKDLGRQIH 308
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 89/194 (45%), Gaps = 1/194 (0%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M+ ++PD LL + E ++ K GF D FA N+L++ +A G
Sbjct: 479 MQVADIKPDPFVCSSLLNACANLSAYEQGKQLHVHAIKFGFMSDIFASNSLVNMYAKCGS 538
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
I A + F E + I++W+A+I G ++ EAL F +M + +T+VSVL A
Sbjct: 539 IEDADRAFSEIPQRGIVSWSAMIGGLAQHGHGKEALIMFNQMLKDCVSPNHITLVSVLCA 598
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
AG N GK + ++ + ++D+ + G ++A ++ + +P+
Sbjct: 599 CNHAGLVNEGKQYFETMEEKFGIKPTQEHHACMIDLLGRSGKLNEAVELVNSIPFEADGS 658
Query: 180 VCWSVLVAGYVQCN 193
V ++L A + N
Sbjct: 659 VWGALLGAARIHKN 672
>Medtr7g011100.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:2910760-2909010 | 20130731
Length = 519
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 112/200 (56%), Gaps = 2/200 (1%)
Query: 34 QIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSE 93
++F + D + N +I+ + G + SA +FDE+ VKD+++W A+I GYV L +
Sbjct: 195 KLFNEMPERDLVSWNVMITGYVKQGEMESARMLFDEAPVKDVVSWNAMIAGYVVCGLSKQ 254
Query: 94 ALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALM 153
AL+ F +M G D +T++S+L A A GD GK VH ++ +L + +AL+
Sbjct: 255 ALELFNEMCRAGVFPDEVTLLSLLSACADLGDLENGKKVHAKVMEISMGKLSTLLGNALI 314
Query: 154 DMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPN 213
DMY KCG+ ++ VF + +DV+ W+ ++ G ++++ +F M + PN
Sbjct: 315 DMYAKCGNIKESLDVF--WSITDKDVISWNSVIVGMALHGHGKESLSLFKMMQRTKICPN 372
Query: 214 EFTLTSVLSACAHSGALDQG 233
E T VL AC+H+G +D+G
Sbjct: 373 EITFVGVLVACSHAGEIDEG 392
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 117/260 (45%), Gaps = 43/260 (16%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPV-VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M + V+ D +TFP +LK ++ V ++ + +LGF + N L+ A G
Sbjct: 99 MHRHFVKGDSYTFPFVLKACTRLFWVNTGSAVHGMVLRLGFGSNAVVRNTLLVFHAKCGD 158
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ A +FD+S D++AW++LI GY + A K F +M
Sbjct: 159 LNVATSLFDDSCKGDVVAWSSLIAGYARRGDLKVARKLFNEMP----------------- 201
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
+ D W+ ++ Y K G + A +FDE P +DV
Sbjct: 202 -----------------------ERDLVSWNVMITGYVKQGEMESARMLFDEAPV--KDV 236
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQY 239
V W+ ++AGYV C + A+ +F M V P+E TL S+LSACA G L+ GK VH
Sbjct: 237 VSWNAMIAGYVVCGLSKQALELFNEMCRAGVFPDEVTLLSLLSACADLGDLENGKKVHAK 296
Query: 240 IECKKVSLNSVELGTALVDM 259
+ + S LG AL+DM
Sbjct: 297 VMEISMGKLSTLLGNALIDM 316
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 87/189 (46%), Gaps = 3/189 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGF-DLDRFAGNALISAFANSG 58
M + GV PD+ T LL + +E+ ++A++ ++ L GNALI +A G
Sbjct: 262 MCRAGVFPDEVTLLSLLSACADLGDLENGKKVHAKVMEISMGKLSTLLGNALIDMYAKCG 321
Query: 59 FIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLR 118
I + VF + KD+I+W ++I G + E+L F M+ T + +T V VL
Sbjct: 322 NIKESLDVFWSITDKDVISWNSVIVGMALHGHGKESLSLFKMMQRTKICPNEITFVGVLV 381
Query: 119 AAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRD 178
A + AG+ + G +++ + ++DM + G +A K D M +
Sbjct: 382 ACSHAGEIDEGYKYFDLMSSEYKIEPNIRHCGCMVDMLGRAGLLKEAAKFIDSMKIE-PN 440
Query: 179 VVCWSVLVA 187
+ W L+A
Sbjct: 441 AIIWRTLLA 449
>Medtr4g108890.1 | PPR containing plant-like protein | HC |
chr4:45133263-45138694 | 20130731
Length = 548
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 124/218 (56%), Gaps = 10/218 (4%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTG 107
N+L+ + G +A VF+E V+++++WT +I GY +N EAL F +MR
Sbjct: 184 NSLLVGYVKCGDFDAARNVFEEIPVRNVVSWTTMIAGYAQNGKCVEALSLFGQMRRARVE 243
Query: 108 VDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACK 167
+D + +V+VL A A GD G+W+H +YVQ + Q + +ALM MY CG D+A +
Sbjct: 244 LDQVVLVAVLSACAELGDLKLGRWIH-WYVQERQRQASVRLNNALMHMYASCGIIDEAYR 302
Query: 168 VFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV-----VPNEFTLTSVLS 222
+F +M S++ V W++++ + + ++A+ +F +MLSD V P+ T + L
Sbjct: 303 MFTKM--SWKTTVSWTIIIMAFAKQGLGKEALDLFKDMLSDGVGKSGIRPDGTTFIAALC 360
Query: 223 ACAHSGALDQG-KLVHQYIECKKVSLNSVELGTALVDM 259
AC+H+G +++G ++ I ++SL +E +VD+
Sbjct: 361 ACSHAGFVEEGCRIFESMIHTWRISLQ-IEHYGCMVDL 397
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 117/282 (41%), Gaps = 37/282 (13%)
Query: 9 DQHTFPLLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFD 68
+H F LL + + I+ Q+ G L+S +A SG + A ++F
Sbjct: 15 QEHIFSLLQTCNNTET--NILQIHTQVILNGLSHKHNIIAKLLSFYAASGKLQHAHKLFI 72
Query: 69 ESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNF 128
+ W +I Y + P ++++ + +M D T +L A G
Sbjct: 73 QIHNPKTTVWNHMIRAYASSITPWKSVQYYNQMVLNACEPDGFTYSFLLSACVRGGLVRE 132
Query: 129 GKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAG 188
G+ +HG + G D +V + L++ Y CG + A VFD+M + R VV W+ L+ G
Sbjct: 133 GEQLHGIVLAKGYCS-DVFVNTNLINFYADCGGVEQARYVFDDM--TQRSVVSWNSLLVG 189
Query: 189 YVQCNKFQDAIRVFWNMLSDNVVP-------------------------------NEFTL 217
YV+C F A VF + NVV ++ L
Sbjct: 190 YVKCGDFDAARNVFEEIPVRNVVSWTTMIAGYAQNGKCVEALSLFGQMRRARVELDQVVL 249
Query: 218 TSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
+VLSACA G L G+ +H Y++ ++ SV L AL+ M
Sbjct: 250 VAVLSACAELGDLKLGRWIHWYVQ-ERQRQASVRLNNALMHM 290
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 70/146 (47%), Gaps = 6/146 (4%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTG 107
NAL+ +A+ G I A ++F + S K ++WT +I + K L EAL F M S G G
Sbjct: 285 NALMHMYASCGIIDEAYRMFTKMSWKTTVSWTIIIMAFAKQGLGKEALDLFKDMLSDGVG 344
Query: 108 V-----DALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHC 162
D T ++ L A + AG G + + R+ L + ++D+ + G
Sbjct: 345 KSGIRPDGTTFIAALCACSHAGFVEEGCRIFESMIHTWRISLQIEHYGCMVDLLSRAGCL 404
Query: 163 DDACKVFDEMPYSYRDVVCWSVLVAG 188
D+A ++ + MP+ D + W L+ G
Sbjct: 405 DEAYRLIETMPFKPNDAI-WGALLGG 429
>Medtr3g096420.1 | PPR containing plant-like protein | HC |
chr3:44072693-44069577 | 20130731
Length = 705
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 129/263 (49%), Gaps = 34/263 (12%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
I+ I K + LD + G+AL+ ++ + SA + FD+ V++I++W +LI Y +N
Sbjct: 173 IHGLIAKSRYSLDVYMGSALVDMYSKCRVVASAQRAFDDMDVRNIVSWNSLITCYEQNGP 232
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
+AL+ FV+M + G D +T+ SV A A G +H ++ + + D + +
Sbjct: 233 AGKALEVFVRMMNCGIEPDEITLASVASACASLSAIREGLQIHARVMKHDKYRNDLVLGN 292
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYS-----------------------------YRDVVC 181
AL+DMY KC ++A VFD MP R+VV
Sbjct: 293 ALVDMYAKCRRVNEARLVFDRMPLRDVVSETSMVSGYAKASSVKAARLMFSNMMERNVVS 352
Query: 182 WSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIE 241
W+ L+AGY Q + ++A+R+F + +++ P +T ++L+ACA+ L G+ H +I
Sbjct: 353 WNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTHIL 412
Query: 242 CKKVSLNSVE-----LGTALVDM 259
S E +G +L+DM
Sbjct: 413 KHGFWFKSGEDSDIFVGNSLIDM 435
Score = 114 bits (286), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 83/270 (30%), Positives = 125/270 (46%), Gaps = 35/270 (12%)
Query: 21 SKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVK------- 73
SK V E +++A+I K F + F N L+ + GF+ A +VFD +
Sbjct: 32 SKSVFE-ARLVHARIIKTQFSSEIFIQNRLVDVYGKCGFLEDARKVFDHMQQRNTFSWNA 90
Query: 74 ------------------------DIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVD 109
D +W A+++G+ + D EAL+ V M S ++
Sbjct: 91 VLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEALRFVVDMHSEDFVLN 150
Query: 110 ALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVF 169
+ S L A A D + G +HG ++ R LD Y+ SAL+DMY KC A + F
Sbjct: 151 EYSFGSALSACAGLMDLSIGVQIHGLIAKS-RYSLDVYMGSALVDMYSKCRVVASAQRAF 209
Query: 170 DEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGA 229
D+M R++V W+ L+ Y Q A+ VF M++ + P+E TL SV SACA A
Sbjct: 210 DDM--DVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLASVASACASLSA 267
Query: 230 LDQGKLVHQYIECKKVSLNSVELGTALVDM 259
+ +G +H + N + LG ALVDM
Sbjct: 268 IREGLQIHARVMKHDKYRNDLVLGNALVDM 297
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 126/273 (46%), Gaps = 42/273 (15%)
Query: 5 GVEPDQHTFPLLLKM-FSKPVVEDPFMIYAQIFKL-GFDLDRFAGNALISAFANSGFIGS 62
G+EPD+ T + S + + I+A++ K + D GNAL+ +A +
Sbjct: 247 GIEPDEITLASVASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNE 306
Query: 63 ACQVFDE-------------------SSVK------------DIIAWTALINGYVKNDLP 91
A VFD SSVK ++++W ALI GY +N
Sbjct: 307 ARLVFDRMPLRDVVSETSMVSGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGEN 366
Query: 92 SEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVH------GFYVQAGRVQLD 145
EA++ F+ ++ T ++L A A D G+ H GF+ ++G D
Sbjct: 367 EEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTHILKHGFWFKSGE-DSD 425
Query: 146 GYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNM 205
+V ++L+DMY KCG +D VF+ M RD V W+ ++ GY Q +A+ +F M
Sbjct: 426 IFVGNSLIDMYMKCGLVEDGRLVFERMLE--RDNVSWNAMIVGYAQNGYGTEALEIFREM 483
Query: 206 LSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQ 238
L P+ T+ VLSAC+H+G +++G+ Q
Sbjct: 484 LVSGERPDHVTMIGVLSACSHAGLVEEGRCYFQ 516
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 79/154 (51%), Gaps = 3/154 (1%)
Query: 36 FKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEAL 95
FK G D D F GN+LI + G + VF+ +D ++W A+I GY +N +EAL
Sbjct: 418 FKSGEDSDIFVGNSLIDMYMKCGLVEDGRLVFERMLERDNVSWNAMIVGYAQNGYGTEAL 477
Query: 96 KCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGK-WVHGFYVQAGRVQLDGYVWSALMD 154
+ F +M +G D +T++ VL A + AG G+ + ++ G V + + ++ ++D
Sbjct: 478 EIFREMLVSGERPDHVTMIGVLSACSHAGLVEEGRCYFQSMTIEHGLVPVKDH-YTCMVD 536
Query: 155 MYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAG 188
+ + G D+A + MP D V W L+A
Sbjct: 537 LLGRAGCLDEANNLIQTMPME-PDAVVWGSLLAA 569
>Medtr3g026690.1 | PPR containing plant-like protein | HC |
chr3:8195048-8190900 | 20130731
Length = 944
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/236 (32%), Positives = 128/236 (54%), Gaps = 6/236 (2%)
Query: 5 GVEPDQHTFPLLLKMFSKPV-VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSA 63
G++PD+ TF +LK + + + IY I G + D + G +LI F G + +A
Sbjct: 94 GLKPDKFTFNFVLKACTSALDFHEGVNIYKDIVFNGLECDVYIGTSLIDMFCKMGCLDNA 153
Query: 64 CQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMA 123
VFD+ VKD + W A+I+G ++ P EAL+ F +M+ G VD ++++++ A +
Sbjct: 154 RNVFDKMPVKDGVCWNAMISGLSQSLNPCEALEMFWRMQMEGFEVDKVSILNLAPAVSRL 213
Query: 124 GDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWS 183
GD K +HG+ V R + G V ++L+DMY KCG A +VFD M RD V W+
Sbjct: 214 GDVGCCKSIHGYVV---RRSICGVVSNSLIDMYCKCGDVHSAQRVFDRM--GVRDDVSWA 268
Query: 184 VLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQY 239
++AGYV+ + + +++ M NV N+ + + L A L++GK ++ Y
Sbjct: 269 TMMAGYVKNGCYFEGLQLLHKMRRGNVKMNKVAVVNALLVVAEMRDLEKGKEIYNY 324
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 129/260 (49%), Gaps = 4/260 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M+ +G++PD+ +L+ ++ + +++ K + D L+S +
Sbjct: 391 MQYEGLKPDKAILSILVSGCTEISNIGLGKIMHCYAIKADMESDISMVTTLVSMYIRFEL 450
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
A +F+ +KDI+ W LING+ K P AL+ F +++ +G D+ T+V + A
Sbjct: 451 FTYAMTLFNRMQIKDIVVWNTLINGFTKYGDPHLALEMFNRLQLSGILPDSGTMVGLFSA 510
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
A+ D + G +HG ++G + D +V ALMDMY KCG ++F + +D
Sbjct: 511 CAIMDDLDLGTCLHGGIEKSG-FESDIHVKVALMDMYAKCGSLCSVERLF-LLTKHVKDE 568
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQY 239
V W+V++AGY+ +AI F M +NV PN T ++L A ++ L + H
Sbjct: 569 VSWNVMIAGYLHNGYSNEAISTFRRMKLENVRPNLVTFVTILPAVSYLSILREAMAFHTC 628
Query: 240 IECKKVSLNSVELGTALVDM 259
I + L+ +G +L+DM
Sbjct: 629 I-IRMGFLSCTLIGNSLIDM 647
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 115/238 (48%), Gaps = 11/238 (4%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPF----MIYAQIFKLGFDLDRFAGNALISAFAN 56
++ G+ PD T ++ +FS + D ++ I K GF+ D AL+ +A
Sbjct: 492 LQLSGILPDSGT---MVGLFSACAIMDDLDLGTCLHGGIEKSGFESDIHVKVALMDMYAK 548
Query: 57 SGFIGSACQVFD-ESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVS 115
G + S ++F VKD ++W +I GY+ N +EA+ F +M+ + +T V+
Sbjct: 549 CGSLCSVERLFLLTKHVKDEVSWNVMIAGYLHNGYSNEAISTFRRMKLENVRPNLVTFVT 608
Query: 116 VLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYS 175
+L A + H ++ G + + ++L+DMY KCG + K F EM
Sbjct: 609 ILPAVSYLSILREAMAFHTCIIRMGFLSCT-LIGNSLIDMYAKCGQLRYSEKCFHEM--E 665
Query: 176 YRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
+D + W+ +++ Y + + A+ +F M NV + + SVLSAC HSG + +G
Sbjct: 666 NKDTISWNAMLSAYAMHGQGELAVALFSVMQESNVRVDSVSYISVLSACRHSGLIQEG 723
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 108/213 (50%), Gaps = 6/213 (2%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTG 107
N+LI + G + SA +VFD V+D ++W ++ GYVKN E L+ KMR
Sbjct: 237 NSLIDMYCKCGDVHSAQRVFDRMGVRDDVSWATMMAGYVKNGCYFEGLQLLHKMRRGNVK 296
Query: 108 VDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACK 167
++ + VV+ L A D GK ++ + +Q G + D V + ++ MY KCG A +
Sbjct: 297 MNKVAVVNALLVVAEMRDLEKGKEIYNYALQMGLMS-DIVVATPIVCMYAKCGELKKARE 355
Query: 168 VFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHS 227
+F + RD+V WS ++ V+ ++ + +F M + + P++ L+ ++S C
Sbjct: 356 LF--LSLEGRDLVAWSAFLSALVETGYPREVLSIFQVMQYEGLKPDKAILSILVSGCTEI 413
Query: 228 GALDQGKLVHQYIECKKVSLNS-VELGTALVDM 259
+ GK++H Y K + S + + T LV M
Sbjct: 414 SNIGLGKIMHCY--AIKADMESDISMVTTLVSM 444
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 106/229 (46%), Gaps = 4/229 (1%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
IY ++G D ++ +A G + A ++F +D++AW+A ++ V+
Sbjct: 321 IYNYALQMGLMSDIVVATPIVCMYAKCGELKKARELFLSLEGRDLVAWSAFLSALVETGY 380
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
P E L F M+ G D + ++ + GK +H + ++A ++ D + +
Sbjct: 381 PREVLSIFQVMQYEGLKPDKAILSILVSGCTEISNIGLGKIMHCYAIKAD-MESDISMVT 439
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV 210
L+ MY + A +F+ M +D+V W+ L+ G+ + A+ +F + +
Sbjct: 440 TLVSMYIRFELFTYAMTLFNRM--QIKDIVVWNTLINGFTKYGDPHLALEMFNRLQLSGI 497
Query: 211 VPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
+P+ T+ + SACA LD G +H IE K + + + AL+DM
Sbjct: 498 LPDSGTMVGLFSACAIMDDLDLGTCLHGGIE-KSGFESDIHVKVALMDM 545
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 84/166 (50%), Gaps = 3/166 (1%)
Query: 75 IIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHG 134
+I + + I Y K +A+ + + G D T VL+A A D + G ++
Sbjct: 64 LILYNSFIKAYSKFHHFHKAINLYHTILKIGLKPDKFTFNFVLKACTSALDFHEGVNIYK 123
Query: 135 FYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNK 194
V G ++ D Y+ ++L+DM+ K G D+A VFD+MP +D VCW+ +++G Q
Sbjct: 124 DIVFNG-LECDVYIGTSLIDMFCKMGCLDNARNVFDKMPV--KDGVCWNAMISGLSQSLN 180
Query: 195 FQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYI 240
+A+ +FW M + ++ ++ ++ A + G + K +H Y+
Sbjct: 181 PCEALEMFWRMQMEGFEVDKVSILNLAPAVSRLGDVGCCKSIHGYV 226
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 86/189 (45%), Gaps = 2/189 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M+ + V P+ TF +L S ++ + + I ++GF GN+LI +A G
Sbjct: 594 MKLENVRPNLVTFVTILPAVSYLSILREAMAFHTCIIRMGFLSCTLIGNSLIDMYAKCGQ 653
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ + + F E KD I+W A+++ Y + A+ F M+ + VD+++ +SVL A
Sbjct: 654 LRYSEKCFHEMENKDTISWNAMLSAYAMHGQGELAVALFSVMQESNVRVDSVSYISVLSA 713
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
+G G + + V+ ++ ++D+ G D+ + ++M + D
Sbjct: 714 CRHSGLIQEGWDIFASMCEKHHVEPSMEHYACMVDLLGCAGLFDEVLSLLNKMT-TEPDA 772
Query: 180 VCWSVLVAG 188
W L+A
Sbjct: 773 RVWGALLAA 781
>Medtr1g040000.1 | PPR containing plant-like protein | HC |
chr1:14632880-14635263 | 20130731
Length = 526
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 116/200 (58%), Gaps = 11/200 (5%)
Query: 43 DRFAGN-----ALISAFANSGFIGSACQVFDE--SSVKDIIAWTALINGYVKNDLPSEAL 95
D F GN A+I A+ G + +A ++FD KD+ +WTA+I+GY + P+EA+
Sbjct: 170 DEFGGNGCVLNAMIVAYVKVGDVSNARKLFDSMLERDKDVFSWTAMISGYTQAHNPNEAI 229
Query: 96 KCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDM 155
K F +M+ D + +++VL A A G + G+W+H Y++ ++ ++++L+DM
Sbjct: 230 KLFRRMQLENVKPDEIAILAVLSACADLGALHLGEWIHN-YIEKHKLSKIVPLYNSLIDM 288
Query: 156 YFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNM-LSDNVVPNE 214
Y K G+ A ++F+ M ++ ++ W+ ++AG ++A+RVF M D V PNE
Sbjct: 289 YAKSGNIRKALELFENM--KHKTIITWTTMIAGLALHGLGKEALRVFSCMEKEDRVKPNE 346
Query: 215 FTLTSVLSACAHSGALDQGK 234
T ++LSAC+H G ++ G+
Sbjct: 347 VTFIAILSACSHVGLVELGR 366
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 94/194 (48%), Gaps = 29/194 (14%)
Query: 94 ALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGR----------VQ 143
A+ F +R G D+ ++ VL++ D GK +H V G +Q
Sbjct: 96 AVSIFRSVRRLGLSFDSYSLPYVLKSVVCLNDFGLGKQIHCVGVVTGLDKNVSVCSSLIQ 155
Query: 144 L------------------DGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVL 185
+ +G V +A++ Y K G +A K+FD M +DV W+ +
Sbjct: 156 MYSCYDVCSARKLFDEFGGNGCVLNAMIVAYVKVGDVSNARKLFDSMLERDKDVFSWTAM 215
Query: 186 VAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKV 245
++GY Q + +AI++F M +NV P+E + +VLSACA GAL G+ +H YIE K+
Sbjct: 216 ISGYTQAHNPNEAIKLFRRMQLENVKPDEIAILAVLSACADLGALHLGEWIHNYIEKHKL 275
Query: 246 SLNSVELGTALVDM 259
S V L +L+DM
Sbjct: 276 S-KIVPLYNSLIDM 288
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 70/148 (47%), Gaps = 6/148 (4%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKM-RSTGT 106
N+LI +A SG I A ++F+ K II WT +I G + L EAL+ F M +
Sbjct: 283 NSLIDMYAKSGNIRKALELFENMKHKTIITWTTMIAGLALHGLGKEALRVFSCMEKEDRV 342
Query: 107 GVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYV--WSALMDMYFKCGHCDD 164
+ +T +++L A + G G+ F R ++ + + ++D+ + GH +
Sbjct: 343 KPNEVTFIAILSACSHVGLVELGR--DYFTSMRSRYGIEPKIEHYGCMIDLLGRAGHLQE 400
Query: 165 ACKVFDEMPYSYRDVVCWSVLVAGYVQC 192
A ++ MP+ + W L+A +C
Sbjct: 401 AKEMVLRMPFE-ANAAIWGSLLAASTRC 427
>Medtr8g065730.2 | PPR containing plant-like protein | HC |
chr8:27332922-27335168 | 20130731
Length = 748
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 132/239 (55%), Gaps = 4/239 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPV-VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M+ + ++ DQ+TF +L + +++ ++A I + + + F +AL+ +
Sbjct: 266 MKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVEMYCKCKN 325
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
I SA VF + + K++++WTA++ GY +N EA+K F M+ G D T+ SV+ +
Sbjct: 326 IKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISS 385
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
A G H + +G + V +AL+ +Y KCG +D+ ++F+E+ S++D
Sbjct: 386 CANLASLEEGAQFHARALTSGLISFIT-VSNALVTLYGKCGSIEDSHRLFNEI--SFKDE 442
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQ 238
V W+ LV+GY Q K + I +F +ML+ + P++ T VLSAC+ +G +++G + +
Sbjct: 443 VTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFE 501
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 126/258 (48%), Gaps = 35/258 (13%)
Query: 12 TFPLLLKMFSKP-VVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDES 70
TF LL + SK V+ I+ + K GF F G+ L+ ++ G I A +VFDE
Sbjct: 145 TFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDEL 204
Query: 71 SVKDI-------------------------------IAWTALINGYVKNDLPSEALKCFV 99
K++ I+WT++I G+ +N L +A+ F
Sbjct: 205 PEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFR 264
Query: 100 KMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKC 159
+M+ +D T SVL A GK VH + ++ + + +V SAL++MY KC
Sbjct: 265 EMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTD-YKDNIFVASALVEMYCKC 323
Query: 160 GHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTS 219
+ A VF +M + ++VV W+ ++ GY Q ++A++ F +M + P++FTL S
Sbjct: 324 KNIKSAEAVFKKM--TCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGS 381
Query: 220 VLSACAHSGALDQGKLVH 237
V+S+CA+ +L++G H
Sbjct: 382 VISSCANLASLEEGAQFH 399
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 124/246 (50%), Gaps = 33/246 (13%)
Query: 45 FAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCF-VKMRS 103
++ N ++SA++ G + +FD +D ++W +LI+GY L +++K + + +++
Sbjct: 76 YSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKN 135
Query: 104 TGT-GVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHC 162
G+ ++ +T ++L A+ G G+ +HG V+ G + +V S L+DMY K G
Sbjct: 136 DGSINLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYV-FVGSPLVDMYSKMGMI 194
Query: 163 DDACKVFDEMP-----------------------------YSYRDVVCWSVLVAGYVQCN 193
A KVFDE+P RD + W+ ++ G+ Q
Sbjct: 195 SCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNG 254
Query: 194 KFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELG 253
+DAI +F M +N+ +++T SVL+AC AL +GK VH YI + +++ +
Sbjct: 255 LDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYI-IRTDYKDNIFVA 313
Query: 254 TALVDM 259
+ALV+M
Sbjct: 314 SALVEM 319
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 95/189 (50%), Gaps = 4/189 (2%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M++ G+EPD T ++ + +E+ +A+ G NAL++ + G
Sbjct: 367 MQKYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGS 426
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
I + ++F+E S KD + WTAL++GY + +E + F M + G D +T + VL A
Sbjct: 427 IEDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSA 486
Query: 120 AAMAGDDNFGKWV-HGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRD 178
+ AG G + + G V + + ++ ++D++ + G ++A ++MP+S D
Sbjct: 487 CSRAGLVEKGNQIFESMINEHGIVPIQDH-YTCMIDLFSRAGRIEEARNFINKMPFS-PD 544
Query: 179 VVCWSVLVA 187
+ W+ L++
Sbjct: 545 AISWATLLS 553
>Medtr8g065730.1 | PPR containing plant-like protein | HC |
chr8:27332922-27335168 | 20130731
Length = 748
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 132/239 (55%), Gaps = 4/239 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPV-VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M+ + ++ DQ+TF +L + +++ ++A I + + + F +AL+ +
Sbjct: 266 MKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVEMYCKCKN 325
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
I SA VF + + K++++WTA++ GY +N EA+K F M+ G D T+ SV+ +
Sbjct: 326 IKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISS 385
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
A G H + +G + V +AL+ +Y KCG +D+ ++F+E+ S++D
Sbjct: 386 CANLASLEEGAQFHARALTSGLISFIT-VSNALVTLYGKCGSIEDSHRLFNEI--SFKDE 442
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQ 238
V W+ LV+GY Q K + I +F +ML+ + P++ T VLSAC+ +G +++G + +
Sbjct: 443 VTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFE 501
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 126/258 (48%), Gaps = 35/258 (13%)
Query: 12 TFPLLLKMFSKP-VVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDES 70
TF LL + SK V+ I+ + K GF F G+ L+ ++ G I A +VFDE
Sbjct: 145 TFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDEL 204
Query: 71 SVKDI-------------------------------IAWTALINGYVKNDLPSEALKCFV 99
K++ I+WT++I G+ +N L +A+ F
Sbjct: 205 PEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFR 264
Query: 100 KMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKC 159
+M+ +D T SVL A GK VH + ++ + + +V SAL++MY KC
Sbjct: 265 EMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTD-YKDNIFVASALVEMYCKC 323
Query: 160 GHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTS 219
+ A VF +M + ++VV W+ ++ GY Q ++A++ F +M + P++FTL S
Sbjct: 324 KNIKSAEAVFKKM--TCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGS 381
Query: 220 VLSACAHSGALDQGKLVH 237
V+S+CA+ +L++G H
Sbjct: 382 VISSCANLASLEEGAQFH 399
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 124/246 (50%), Gaps = 33/246 (13%)
Query: 45 FAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCF-VKMRS 103
++ N ++SA++ G + +FD +D ++W +LI+GY L +++K + + +++
Sbjct: 76 YSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKN 135
Query: 104 TGT-GVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHC 162
G+ ++ +T ++L A+ G G+ +HG V+ G + +V S L+DMY K G
Sbjct: 136 DGSINLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYV-FVGSPLVDMYSKMGMI 194
Query: 163 DDACKVFDEMP-----------------------------YSYRDVVCWSVLVAGYVQCN 193
A KVFDE+P RD + W+ ++ G+ Q
Sbjct: 195 SCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNG 254
Query: 194 KFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELG 253
+DAI +F M +N+ +++T SVL+AC AL +GK VH YI + +++ +
Sbjct: 255 LDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYI-IRTDYKDNIFVA 313
Query: 254 TALVDM 259
+ALV+M
Sbjct: 314 SALVEM 319
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 95/189 (50%), Gaps = 4/189 (2%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M++ G+EPD T ++ + +E+ +A+ G NAL++ + G
Sbjct: 367 MQKYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGS 426
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
I + ++F+E S KD + WTAL++GY + +E + F M + G D +T + VL A
Sbjct: 427 IEDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSA 486
Query: 120 AAMAGDDNFGKWV-HGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRD 178
+ AG G + + G V + + ++ ++D++ + G ++A ++MP+S D
Sbjct: 487 CSRAGLVEKGNQIFESMINEHGIVPIQDH-YTCMIDLFSRAGRIEEARNFINKMPFS-PD 544
Query: 179 VVCWSVLVA 187
+ W+ L++
Sbjct: 545 AISWATLLS 553
>Medtr4g068900.1 | PPR containing plant-like protein | HC |
chr4:25858642-25860684 | 20130731
Length = 680
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 117/206 (56%), Gaps = 3/206 (1%)
Query: 32 YAQIFKLGFDL-DRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
YA++ G + +FA ++LI +++ G + A ++FD ++ + WTAL +GY K+
Sbjct: 314 YAELVYAGIGIKSQFAVSSLIVGYSSQGEMMKAQRLFDSLLERNSVVWTALCSGYAKSQQ 373
Query: 91 PSEALKCFVKMRSTGTGV-DALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVW 149
E K F K + + DA+ ++ VL A A + GK +H Y+ R+++D +
Sbjct: 374 CEEVFKLFRKFVTREELIPDAMIIIRVLGACATQATLSLGKQIHT-YILRMRLKMDKKLL 432
Query: 150 SALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDN 209
SA++DMY KCG+ A K F M RDV+ ++V++AGY AI++F +ML N
Sbjct: 433 SAMVDMYSKCGNIMYAEKSFQLMTDRDRDVILYNVMIAGYAHHGFENKAIQLFHDMLKKN 492
Query: 210 VVPNEFTLTSVLSACAHSGALDQGKL 235
V P+ T ++LSAC H G ++QG++
Sbjct: 493 VKPDAVTFVALLSACRHRGLVEQGEI 518
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 116/256 (45%), Gaps = 39/256 (15%)
Query: 39 GFD--LDRFAGNALISAFANSGFIGSACQVF-DESSVKDIIAWTALINGYVKNDLPSEAL 95
GFD +D + NA+++A G + A VF + D ++W LI GY +N +AL
Sbjct: 187 GFDGVVDLVSKNAMVAACCREGEMDMALNVFWKNHELNDTVSWNTLIAGYAQNGYMDKAL 246
Query: 96 KCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDM 155
FVKM G D T+ SVL + GK VH +V + ++ S ++D+
Sbjct: 247 ALFVKMTERGVRFDEHTLASVLSVCSGLKHLKLGKCVHA-WVLKNDYNSNQFISSGIVDL 305
Query: 156 YFKCGHCD-------------------------------DACKVFDEMPYSYRDVVCWSV 184
Y KCG+ A ++FD + R+ V W+
Sbjct: 306 YCKCGNIRYAELVYAGIGIKSQFAVSSLIVGYSSQGEMMKAQRLFDSLL--ERNSVVWTA 363
Query: 185 LVAGYVQCNKFQDAIRVFWNMLS-DNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECK 243
L +GY + + ++ ++F ++ + ++P+ + VL ACA L GK +H YI
Sbjct: 364 LCSGYAKSQQCEEVFKLFRKFVTREELIPDAMIIIRVLGACATQATLSLGKQIHTYILRM 423
Query: 244 KVSLNSVELGTALVDM 259
++ ++ +L +A+VDM
Sbjct: 424 RLKMDK-KLLSAMVDM 438
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 109/230 (47%), Gaps = 35/230 (15%)
Query: 45 FAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKND-LPSEALKCFVKMRS 103
++ NALI A+ + + A VFD + +D++++ ++++ YV D +EA+ F KM+S
Sbjct: 59 YSWNALIMAYIKAQNLTQARAVFDSAVDRDLVSYNSMLSAYVGADGYETEAVDLFDKMQS 118
Query: 104 TG--TGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGH 161
G+D ++ +++ +A +GK +H + V+ L + S+L++MY KCG
Sbjct: 119 ARDMIGIDEFSLTTMVNFSAKLRLVCYGKQMHSYMVKTAS-DLSKFASSSLINMYSKCGL 177
Query: 162 CDDACKV---FD-------------------EMP---------YSYRDVVCWSVLVAGYV 190
DAC V FD EM + D V W+ L+AGY
Sbjct: 178 FRDACSVVSGFDGVVDLVSKNAMVAACCREGEMDMALNVFWKNHELNDTVSWNTLIAGYA 237
Query: 191 QCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYI 240
Q A+ +F M V +E TL SVLS C+ L GK VH ++
Sbjct: 238 QNGYMDKALALFVKMTERGVRFDEHTLASVLSVCSGLKHLKLGKCVHAWV 287
>Medtr1g111020.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:50133605-50130067 | 20130731
Length = 1017
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 128/242 (52%), Gaps = 7/242 (2%)
Query: 1 MRQKGVEPDQHTFPLLLK-MFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
+ + ++ +Q T +LK + S ++ I+ K G D + N+L+ +
Sbjct: 378 LHHENIDFNQTTLSTVLKSVASLQQIKVCKQIHTLSIKCGIYSDFYVINSLLDTYGKCSH 437
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
I A ++F+E + +D++A+T++I Y ++ EALK +++M+ D S+L A
Sbjct: 438 IDEASKIFEERTWEDLVAYTSMITAYSQHGDAEEALKLYLQMQVADIKPDPFVCSSLLNA 497
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
A GK +H ++ G + D + ++L++MY KCG +DA + F E+P R +
Sbjct: 498 CANLSAYEQGKQLHVHAIKFGFMS-DIFASNSLVNMYAKCGSIEDADRAFSEIPQ--RGI 554
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQY 239
V WS ++ G Q ++A+ +F ML D V PN TL SVL AC H+G +++GK QY
Sbjct: 555 VSWSAMIGGLAQHGHGKEALIMFNQMLKDCVSPNHITLVSVLCACNHAGLVNEGK---QY 611
Query: 240 IE 241
E
Sbjct: 612 FE 613
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 74/230 (32%), Positives = 122/230 (53%), Gaps = 5/230 (2%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESS-VKDIIAWTALINGYVKND 89
++ + K GF N L++ ++NS G AC + D+S+ + +++W+ALI+ YV+N
Sbjct: 3 LHTHLIKFGFSRHSSLRNHLLTFYSNSRRFGYACNLLDQSTEPRTVVSWSALISRYVQNG 62
Query: 90 LPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVW 149
EAL F +M + G + T +VL+A ++ D N GK VH V +G + D +V
Sbjct: 63 FHKEALLAFNEMCTLGVKSNEFTFPTVLKACSIKKDLNMGKKVHAMTVVSG-FESDAFVS 121
Query: 150 SALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDN 209
+ L+ MY KCG D+ K+F + VV W+ L + +VQ + + + +F M+
Sbjct: 122 NTLVVMYAKCGQFSDSKKLFGMILEP--GVVSWNALFSCHVQSDFLAETVDLFKRMVEGK 179
Query: 210 VVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
V PNE++L+ +L+ACA G+ VH + L+ ALVDM
Sbjct: 180 VRPNEYSLSIILNACAGLRDGGIGRTVHGLLMKLGHGLDQFS-ANALVDM 228
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 121/223 (54%), Gaps = 11/223 (4%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
++ + KLG LD+F+ NAL+ +A +G I A VF E D ++W A+I G V ++
Sbjct: 206 VHGLLMKLGHGLDQFSANALVDMYAKAGRIEDAVDVFREMIHPDTVSWNAIIAGCVLHEY 265
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
AL +M+ +G+ + T+ S L+A A G + G+ +H V+ D +V
Sbjct: 266 NDLALILLNEMKKSGSCPNVFTLSSALKACAAMGLKDLGRQIHSCSVKIDS-DSDLFVAV 324
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV 210
L+D+Y KC DDA + +D MP + ++ + L++GY QC + AI +F+ + +N+
Sbjct: 325 GLIDLYSKCEMMDDARRAYDLMP-TKDHIIAGNALISGYSQCGDDEQAISLFFELHHENI 383
Query: 211 VPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELG 253
N+ TL++VL + A +L Q K+ CK++ S++ G
Sbjct: 384 DFNQTTLSTVLKSVA---SLQQIKV------CKQIHTLSIKCG 417
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 121/237 (51%), Gaps = 10/237 (4%)
Query: 5 GVEPDQHTFPLLLKMFSKPVVEDPFM---IYAQIFKLGFDLDRFAGNALISAFANSGFIG 61
GV+ ++ TFP +LK S + +D M ++A GF+ D F N L+ +A G
Sbjct: 78 GVKSNEFTFPTVLKACS--IKKDLNMGKKVHAMTVVSGFESDAFVSNTLVVMYAKCGQFS 135
Query: 62 SACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAA 121
+ ++F +++W AL + +V++D +E + F +M + ++ +L A A
Sbjct: 136 DSKKLFGMILEPGVVSWNALFSCHVQSDFLAETVDLFKRMVEGKVRPNEYSLSIILNACA 195
Query: 122 MAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVC 181
D G+ VHG ++ G LD + +AL+DMY K G +DA VF EM + D V
Sbjct: 196 GLRDGGIGRTVHGLLMKLGH-GLDQFSANALVDMYAKAGRIEDAVDVFREMIHP--DTVS 252
Query: 182 WSVLVAGYVQCNKFQDAIRVFWN-MLSDNVVPNEFTLTSVLSACAHSGALDQGKLVH 237
W+ ++AG V +++ D + N M PN FTL+S L ACA G D G+ +H
Sbjct: 253 WNAIIAGCV-LHEYNDLALILLNEMKKSGSCPNVFTLSSALKACAAMGLKDLGRQIH 308
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 89/194 (45%), Gaps = 1/194 (0%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M+ ++PD LL + E ++ K GF D FA N+L++ +A G
Sbjct: 479 MQVADIKPDPFVCSSLLNACANLSAYEQGKQLHVHAIKFGFMSDIFASNSLVNMYAKCGS 538
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
I A + F E + I++W+A+I G ++ EAL F +M + +T+VSVL A
Sbjct: 539 IEDADRAFSEIPQRGIVSWSAMIGGLAQHGHGKEALIMFNQMLKDCVSPNHITLVSVLCA 598
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
AG N GK + ++ + ++D+ + G ++A ++ + +P+
Sbjct: 599 CNHAGLVNEGKQYFETMEEKFGIKPTQEHHACMIDLLGRSGKLNEAVELVNSIPFEADGS 658
Query: 180 VCWSVLVAGYVQCN 193
V ++L A + N
Sbjct: 659 VWGALLGAARIHKN 672
>Medtr7g078420.1 | PPR containing plant-like protein | HC |
chr7:29654282-29650656 | 20130731
Length = 646
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 112/195 (57%), Gaps = 4/195 (2%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKM-RSTGT 106
NA+ISA+A G + SA +FD+ +D ++W ++I GY +N +A+K F +M S +
Sbjct: 341 NAMISAYARVGDLPSARHLFDKMPQRDTVSWNSMIAGYTQNGESVKAIKLFEEMISSEDS 400
Query: 107 GVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDAC 166
D +T+VSV A G+ G W ++ +Q+ V+++L+ MY +CG DA
Sbjct: 401 KPDEVTMVSVFSACGHLGELGLGNWAVSI-LKENHIQISISVYNSLISMYSRCGSMQDAV 459
Query: 167 KVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAH 226
+F EM + RD+V ++ L++G+ + ++I + M D + P+ T ++L+AC+H
Sbjct: 460 LIFQEM--ATRDLVSYNTLISGFAEHGHGMESIELLLKMKEDGIEPDRITYIAILTACSH 517
Query: 227 SGALDQGKLVHQYIE 241
+G L +G+ + + I+
Sbjct: 518 AGLLGEGQRLFESIK 532
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 112/248 (45%), Gaps = 39/248 (15%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGT- 106
+I+ A G + +A FD+ + +++W A+++GY + P E ++ F M S G
Sbjct: 204 TTMITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNV 263
Query: 107 GVDALTVVSVLRAAAMAGD------------DNFG---------------------KWVH 133
D T V+V+ + + GD D G + H
Sbjct: 264 QPDETTWVTVISSCSSLGDPCLSESIVRKLDDTVGFRPNYFVKTALLDMHAKCGNLEAAH 323
Query: 134 GFYVQAGRVQLDGYV-WSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQC 192
+ Q G + V W+A++ Y + G A +FD+MP RD V W+ ++AGY Q
Sbjct: 324 KIFEQLGVYKYRSSVPWNAMISAYARVGDLPSARHLFDKMP--QRDTVSWNSMIAGYTQN 381
Query: 193 NKFQDAIRVFWNML-SDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVE 251
+ AI++F M+ S++ P+E T+ SV SAC H G L G ++ + + S+
Sbjct: 382 GESVKAIKLFEEMISSEDSKPDEVTMVSVFSACGHLGELGLGNWAVSILKENHIQI-SIS 440
Query: 252 LGTALVDM 259
+ +L+ M
Sbjct: 441 VYNSLISM 448
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 104/229 (45%), Gaps = 43/229 (18%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFI 60
+R ++P+ + +++K + + A + K G+D D + N ++ +A G I
Sbjct: 95 LRHCNIKPNTSFYSVMMK----SAGSESMLFLAHVLKSGYDRDHYVRNGILGIYAKYGPI 150
Query: 61 GSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAA 120
A ++FDE + + W +I+GY KC G +A T+ V+
Sbjct: 151 EFARKLFDEMPDRTVADWNVMISGY---------WKC-------GNEEEASTLFHVM--- 191
Query: 121 AMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVV 180
GD + V W+ ++ + K G+ A FD+MP R VV
Sbjct: 192 ---GDQEISRNV--------------ITWTTMITGHAKKGNLKTARMYFDKMP--ERSVV 232
Query: 181 CWSVLVAGYVQCNKFQDAIRVFWNMLSD-NVVPNEFTLTSVLSACAHSG 228
W+ +++GY Q ++ IR+F +MLS NV P+E T +V+S+C+ G
Sbjct: 233 SWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWVTVISSCSSLG 281
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 73/144 (50%), Gaps = 5/144 (3%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTG 107
N+LIS ++ G + A +F E + +D++++ LI+G+ ++ E+++ +KM+ G
Sbjct: 443 NSLISMYSRCGSMQDAVLIFQEMATRDLVSYNTLISGFAEHGHGMESIELLLKMKEDGIE 502
Query: 108 VDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACK 167
D +T +++L A + AG G+ + +D Y + ++DM + G ++A K
Sbjct: 503 PDRITYIAILTACSHAGLLGEGQ---RLFESIKFPDVDHY--ACMIDMLGRAGRLEEAMK 557
Query: 168 VFDEMPYSYRDVVCWSVLVAGYVQ 191
+ MP + S+L A +
Sbjct: 558 LIQSMPMEPHAGIYGSLLNATSIH 581
>Medtr1g071240.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:31582853-31578503 | 20130731
Length = 1126
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 120/216 (55%), Gaps = 11/216 (5%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
I+ + K G D NA+++ + + A VF+ + KDI++WT++I V N L
Sbjct: 475 IHGYVLKGGL-ADILIQNAIVNVYGELALVDYARHVFESINSKDIVSWTSMITCCVHNGL 533
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
EAL+ F + T D +T+VSVL AAA GK +HGF ++ G L+G + +
Sbjct: 534 AIEALELFNSLIETNIEPDLITLVSVLYAAAALSSLKKGKEIHGFLIRKGFF-LEGLIAN 592
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLV--AGYVQCNKFQDAIRVFWNMLSD 208
+L+DMY +CG ++A +F+ + RD++ W+ ++ G C K DAI +F M +
Sbjct: 593 SLVDMYARCGTMENARNIFNYV--KQRDLILWTSMINANGMHGCGK--DAIDLFSKMTDE 648
Query: 209 NVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKK 244
NV+P+ T ++L AC+HSG + +GK Q+ E K
Sbjct: 649 NVLPDHITFLALLYACSHSGLVVEGK---QHFEIMK 681
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 128/241 (53%), Gaps = 4/241 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPV-VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M++ GVE + +TF L+ P ++ I+A I K D + NALI+ +AN G
Sbjct: 242 MQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHFTDVYVSNALIAMYANCGQ 301
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ A +VF KD ++W L++G V+ND+ S+A+ F M+ +G D ++V++++ A
Sbjct: 302 MEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQKPDQVSVLNMIAA 361
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
+ + + G VH + ++ G + + ++ ++L+DMY KC F+ MP +D+
Sbjct: 362 SGRSANLLAGMEVHAYAIKHG-IDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMP--EKDL 418
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQY 239
+ W+ ++AGY Q DA+ + + + + + + S+L AC+ + K +H Y
Sbjct: 419 ISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSILLACSGLKSEKLIKEIHGY 478
Query: 240 I 240
+
Sbjct: 479 V 479
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 103/232 (44%), Gaps = 7/232 (3%)
Query: 31 IYAQIFKLGFDLDR-FAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKND 89
++A K LD F + + G A +VFD+ S + I W A+I V
Sbjct: 68 LHAHFLKTQNYLDSVFLDTKFVHMYGKCGSFYDAVKVFDKMSERTIFTWNAMIGACVSAG 127
Query: 90 LPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVW 149
EA++ + +MR G +DA T VL+A + G +HG V+ G G+V+
Sbjct: 128 RYVEAIELYKEMRVLGVSLDAFTFPCVLKACGAFKERRLGCEIHGVAVKCG---YGGFVF 184
Query: 150 --SALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLS 207
+AL+ MY KCG A +FD D V W+ +++ +V + +A+ +F M
Sbjct: 185 VCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSIISAHVGEGESLEALSLFRRMQE 244
Query: 208 DNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
V N +T S L AC + G+ +H I K V + AL+ M
Sbjct: 245 VGVESNTYTFVSALQACEGPTFIKIGRGIHAVI-LKSNHFTDVYVSNALIAM 295
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 5/107 (4%)
Query: 129 GKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAG 188
G+ +H +++ ++ + + MY KCG DA KVFD+M S R + W+ ++
Sbjct: 65 GQQLHAHFLKTQNYLDSVFLDTKFVHMYGKCGSFYDAVKVFDKM--SERTIFTWNAMIGA 122
Query: 189 YVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKL 235
V ++ +AI ++ M V + FT VL AC GA + +L
Sbjct: 123 CVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKAC---GAFKERRL 166
>Medtr2g016780.1 | editing factor, putative | HC |
chr2:5197710-5195940 | 20130731
Length = 551
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 118/213 (55%), Gaps = 7/213 (3%)
Query: 25 VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSG----FIGSACQVFDESSVKDIIAWTA 80
+E+ +++ ++ G++ + F NA+I+ +A G G ++ E + D++AW A
Sbjct: 198 IEEALVLFERMKMEGYEPNDFTWNAIIATYARLGDSKKAFGFMERMQKEGFIPDVVAWNA 257
Query: 81 LINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAG 140
LI+G+ +N E F +M +G + +T+ ++L A G +G+ VHGF + G
Sbjct: 258 LISGFAQNHQFRETFTVFREMLVSGICPNQVTIAALLPACGSVGSVKWGREVHGFICRKG 317
Query: 141 RVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIR 200
+ ++ SAL+DMY KCG DA VFD++ ++V W+ ++ + +C A+
Sbjct: 318 -FDANVFIASALIDMYSKCGSLKDARNVFDKI--QCKNVASWNAMIDCFGKCGMVDSALE 374
Query: 201 VFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
+F M + + PNE T +LSAC+HSG++++G
Sbjct: 375 LFTKMKEEGLQPNEVTFACILSACSHSGSVEKG 407
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 125/260 (48%), Gaps = 36/260 (13%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPV-VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
MR G+ ++ TF +++K + ++ ++ I ++G D GN LI + G
Sbjct: 107 MRDIGLIGNKFTFGIVIKTCVGLMDMKKGKQVHGMICEMGLMNDVLIGNGLIDMYGKCGS 166
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ AC+VFD S +D+ +WT++I G+ EAL F +M+ G + T +++
Sbjct: 167 VDYACRVFDGMSERDVASWTSMICGFCNTGRIEEALVLFERMKMEGYEPNDFTWNAIIAT 226
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
A GD K GF R+Q +G++ DV
Sbjct: 227 YARLGDS---KKAFGFME---RMQKEGFI----------------------------PDV 252
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQY 239
V W+ L++G+ Q ++F++ VF ML + PN+ T+ ++L AC G++ G+ VH +
Sbjct: 253 VAWNALISGFAQNHQFRETFTVFREMLVSGICPNQVTIAALLPACGSVGSVKWGREVHGF 312
Query: 240 IECKKVSLNSVELGTALVDM 259
I C+K +V + +AL+DM
Sbjct: 313 I-CRKGFDANVFIASALIDM 331
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 86/186 (46%), Gaps = 1/186 (0%)
Query: 1 MRQKGVEPDQHTFPLLLKMF-SKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M G+ P+Q T LL S V+ ++ I + GFD + F +ALI ++ G
Sbjct: 278 MLVSGICPNQVTIAALLPACGSVGSVKWGREVHGFICRKGFDANVFIASALIDMYSKCGS 337
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ A VFD+ K++ +W A+I+ + K + AL+ F KM+ G + +T +L A
Sbjct: 338 LKDARNVFDKIQCKNVASWNAMIDCFGKCGMVDSALELFTKMKEEGLQPNEVTFACILSA 397
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
+ +G G + + V++ ++ ++D+ + G +A + MP +
Sbjct: 398 CSHSGSVEKGLEIFTLMKECYGVEICKEHYACIVDLLCRSGKIVEAYEFIKAMPIQVTES 457
Query: 180 VCWSVL 185
+ + L
Sbjct: 458 IAGAFL 463
>Medtr3g012530.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:3530268-3532784 | 20130731
Length = 696
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 107/209 (51%), Gaps = 3/209 (1%)
Query: 25 VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALING 84
+E I+ I K + D F ALI ++ G I A VFD+ K + W +I G
Sbjct: 240 IEVGRQIHTCILKRAVNGDPFVDCALIDMYSKCGNIEDARCVFDQMPQKTTVGWNTIIAG 299
Query: 85 YVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQL 144
Y EAL + KMR +GT +D T+ V+ A GK H V+ G
Sbjct: 300 YAFRGFSEEALGIYYKMRDSGTKIDHFTISIVITICARLASLEHGKQGHAALVRRG-FGT 358
Query: 145 DGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWN 204
D SAL++ Y K G ++A VFD+M ++++ W+ L+AGY + ++AI +F
Sbjct: 359 DLVANSALVNFYSKWGRMENARHVFDKM--HRKNIISWNALIAGYGHHGRGEEAIEMFEK 416
Query: 205 MLSDNVVPNEFTLTSVLSACAHSGALDQG 233
ML +N+ PN T +VLSAC++SG ++G
Sbjct: 417 MLQENMTPNHVTFLAVLSACSYSGLSERG 445
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 101/199 (50%), Gaps = 3/199 (1%)
Query: 39 GFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCF 98
GF+LD + N ++ + A FD+ +D +W +I G V + SEA + F
Sbjct: 153 GFELDLYMMNRVLFMHVQCNLMRDARTWFDDMPERDSSSWMTMIGGLVDSRNYSEAFELF 212
Query: 99 VKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFK 158
+ M + T +++RA+A G+ +H ++ V D +V AL+DMY K
Sbjct: 213 LCMWEEFNNGKSRTFAAMVRASARLDCIEVGRQIHTCILKRA-VNGDPFVDCALIDMYSK 271
Query: 159 CGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLT 218
CG+ +DA VFD+MP + V W+ ++AGY ++A+ +++ M + FT++
Sbjct: 272 CGNIEDARCVFDQMP--QKTTVGWNTIIAGYAFRGFSEEALGIYYKMRDSGTKIDHFTIS 329
Query: 219 SVLSACAHSGALDQGKLVH 237
V++ CA +L+ GK H
Sbjct: 330 IVITICARLASLEHGKQGH 348
>Medtr5g043920.1 | PPR containing plant-like protein | HC |
chr5:19295539-19293687 | 20130731
Length = 498
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/238 (32%), Positives = 128/238 (53%), Gaps = 9/238 (3%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVE-DPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
MR+ GV+P++ T+P + K + +V + ++A + K G D D + N +I+ +
Sbjct: 102 MRENGVKPNKLTYPFIFKSCAMALVLCEGKQVHADLVKFGLDSDVYVCNNMINFYGCCKK 161
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
I A +VFDE V+ I++W +++ V+N S+ + F KMR D ++V +L
Sbjct: 162 IVYARKVFDEMCVRTIVSWNSVMTACVENVWLSDGIGYFFKMRDCAFEPDETSMVLLLSV 221
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
A G + G+WVH + G V L ++ +AL+DMY K G A VF+ M R+V
Sbjct: 222 CAELGYLSLGRWVHSQLILKGMV-LSVHLGTALVDMYGKSGALGYARVVFERM--EKRNV 278
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSD----NVVPNEFTLTSVLSACAHSGALDQG 233
WS ++ G Q + F + V ++M++D N+ PN T VL AC+H+G +D+G
Sbjct: 279 WTWSAMIMGLAQ-HGFAEEALVLFDMMNDKKSNNISPNYVTYLGVLCACSHAGMVDEG 335
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 99/194 (51%), Gaps = 4/194 (2%)
Query: 66 VFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGD 125
VF S+ I+W LI GY +D P E++ F KMR G + LT + ++ AMA
Sbjct: 67 VFHFSNNPSPISWNILIRGYASSDSPIESIWVFKKMRENGVKPNKLTYPFIFKSCAMALV 126
Query: 126 DNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVL 185
GK VH V+ G + D YV + +++ Y C A KVFDEM R +V W+ +
Sbjct: 127 LCEGKQVHADLVKFG-LDSDVYVCNNMINFYGCCKKIVYARKVFDEM--CVRTIVSWNSV 183
Query: 186 VAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKV 245
+ V+ D I F+ M P+E ++ +LS CA G L G+ VH + K +
Sbjct: 184 MTACVENVWLSDGIGYFFKMRDCAFEPDETSMVLLLSVCAELGYLSLGRWVHSQLILKGM 243
Query: 246 SLNSVELGTALVDM 259
L SV LGTALVDM
Sbjct: 244 VL-SVHLGTALVDM 256
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 92/194 (47%), Gaps = 9/194 (4%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
MR EPD+ + LLL + ++ + +++Q+ G L G AL+ + SG
Sbjct: 203 MRDCAFEPDETSMVLLLSVCAELGYLSLGRWVHSQLILKGMVLSVHLGTALVDMYGKSGA 262
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKM---RSTGTGVDALTVVSV 116
+G A VF+ +++ W+A+I G ++ EAL F M +S + +T + V
Sbjct: 263 LGYARVVFERMEKRNVWTWSAMIMGLAQHGFAEEALVLFDMMNDKKSNNISPNYVTYLGV 322
Query: 117 LRAAAMAG--DDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPY 174
L A + AG D+ F + +V + + Y A++D+ + GH +A + MP+
Sbjct: 323 LCACSHAGMVDEGFRYFRDMEFVHGIKPMMVHY--GAMVDVLGRAGHLGEAYRFIQSMPF 380
Query: 175 SYRDVVCWSVLVAG 188
+ D + W L++
Sbjct: 381 A-PDPIVWRTLLSA 393
>Medtr4g023510.1 | PPR containing plant-like protein | HC |
chr4:7953334-7955464 | 20130731
Length = 494
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 113/213 (53%), Gaps = 6/213 (2%)
Query: 33 AQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPS 92
AQ+F D + N IS G + A VFD V+ +++WT +I+GY + + P
Sbjct: 169 AQVFGEMPDRNTVTWNVFISGLIKWGQLEFARSVFDRMVVRSVVSWTLVIDGYTRMNKPL 228
Query: 93 EALKCFVKMRST-GTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSA 151
+AL F KM G + +T+++V A A G+ + VHG+ + G +D + +A
Sbjct: 229 KALALFRKMIEVDGIEPNEVTLLTVFPAIAHLGNVKMCESVHGYVEKRGFNAVDIRIVNA 288
Query: 152 LMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVV 211
L+D+Y KCG + A +F EMP R+ V W+ +++GY ++A+ F M V
Sbjct: 289 LIDLYAKCGCIESASGLFSEMPDWRRNSVSWNSVMSGYATFGMVREAVDTFEKMEKAGVR 348
Query: 212 PNEFTLTSVLSACAHSGALDQ-----GKLVHQY 239
PN S+LSAC+HSG +++ GK+V+ Y
Sbjct: 349 PNHVAFLSILSACSHSGLVEEGLEFFGKMVNDY 381
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 98/224 (43%), Gaps = 34/224 (15%)
Query: 69 ESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGT---GVDALTVVSVLRAAAMAGD 125
+++ ++ + LI Y + P E+LK F + T +D+ T+ + A A
Sbjct: 70 HNNLTSLLLFNNLIRSYSLSLFPHESLKFFTHTLNNLTHSLSLDSFTLTFLAHACANLDT 129
Query: 126 DNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMP------------ 173
+FG +H + G + +V + L+ MY G DA +VF EMP
Sbjct: 130 THFGFHLHCIVCKMG-FENHVFVQTGLLHMYSNWGFLVDAAQVFGEMPDRNTVTWNVFIS 188
Query: 174 -----------------YSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLS-DNVVPNEF 215
R VV W++++ GY + NK A+ +F M+ D + PNE
Sbjct: 189 GLIKWGQLEFARSVFDRMVVRSVVSWTLVIDGYTRMNKPLKALALFRKMIEVDGIEPNEV 248
Query: 216 TLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
TL +V A AH G + + VH Y+E + + + + AL+D+
Sbjct: 249 TLLTVFPAIAHLGNVKMCESVHGYVEKRGFNAVDIRIVNALIDL 292
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 90/191 (47%), Gaps = 10/191 (5%)
Query: 5 GVEPDQHT----FPLLLKMFSKPVVEDPFMIYAQIFKLGFD-LDRFAGNALISAFANSGF 59
G+EP++ T FP + + + + E ++ + K GF+ +D NALI +A G
Sbjct: 242 GIEPNEVTLLTVFPAIAHLGNVKMCES---VHGYVEKRGFNAVDIRIVNALIDLYAKCGC 298
Query: 60 IGSACQVFDESS--VKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVL 117
I SA +F E ++ ++W ++++GY + EA+ F KM G + + +S+L
Sbjct: 299 IESASGLFSEMPDWRRNSVSWNSVMSGYATFGMVREAVDTFEKMEKAGVRPNHVAFLSIL 358
Query: 118 RAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYR 177
A + +G G G V + D + ++DM + G +A KV E+P+
Sbjct: 359 SACSHSGLVEEGLEFFGKMVNDYGLVPDIKHYGCVIDMLGRAGRLGEAEKVALEVPHEAA 418
Query: 178 DVVCWSVLVAG 188
+ V W L+
Sbjct: 419 NDVIWRTLLGA 429
>Medtr7g084830.1 | PPR containing plant-like protein | HC |
chr7:32742835-32744848 | 20130731
Length = 476
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 86/261 (32%), Positives = 120/261 (45%), Gaps = 36/261 (13%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
I+A+I + D+ L ++ G I A VFD+ + DI W +I Y + L
Sbjct: 39 IHARIIRFRLTHDQLLIRKLCQISSSYGKIDYASLVFDQLNDPDIFTWNVMIRAYNTSGL 98
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
P +++ F M G D T V+ A +G +FG+ HG ++ G D YV +
Sbjct: 99 PQKSIFLFKDMICCGFLPDKFTYPFVINACIASGVIDFGRLTHGLAIKMG-FWSDVYVQN 157
Query: 151 ALMDMYFKCG-HCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVF------- 202
+M++YFK G DD KVFD+M R+VV W+ ++AG V C K A VF
Sbjct: 158 NMMNLYFKIGGDVDDGWKVFDKM--RVRNVVSWTTVIAGLVACGKLDTAREVFERIPSKN 215
Query: 203 ---WN---------------------MLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQ 238
W ML DNV PNEFTL S++ AC G+L G+ +H
Sbjct: 216 VVSWTAMINGYVKNDNPIKAFDLFERMLIDNVRPNEFTLVSLIKACTDLGSLKLGRRMHD 275
Query: 239 YIECKKVSLNSVELGTALVDM 259
+ L LGTALVDM
Sbjct: 276 FALKNGFELGPF-LGTALVDM 295
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 99/186 (53%), Gaps = 3/186 (1%)
Query: 49 ALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGV 108
+I+ G + +A +VF+ K++++WTA+INGYVKND P +A F +M
Sbjct: 190 TVIAGLVACGKLDTAREVFERIPSKNVVSWTAMINGYVKNDNPIKAFDLFERMLIDNVRP 249
Query: 109 DALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKV 168
+ T+VS+++A G G+ +H F ++ G +L ++ +AL+DMY KCG D A KV
Sbjct: 250 NEFTLVSLIKACTDLGSLKLGRRMHDFALKNG-FELGPFLGTALVDMYSKCGSLDAAVKV 308
Query: 169 FDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSG 228
F M R++ W+ ++ + + + +F M VVP+ T VLSAC
Sbjct: 309 FGLM--EVRNLATWNTMLTSFGVHGFGNEVLDLFKEMEKAGVVPDAITFVGVLSACVQIN 366
Query: 229 ALDQGK 234
L+ G+
Sbjct: 367 DLELGQ 372
>Medtr1g040635.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:15046911-15042560 | 20130731
Length = 737
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 88/271 (32%), Positives = 131/271 (48%), Gaps = 41/271 (15%)
Query: 8 PDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQV 66
PD +TFP + K + E I+ + +LGF+ + F NA+IS + + A +V
Sbjct: 8 PDHYTFPFVFKACGEISNFELGASIHGCVIRLGFESNVFVCNAVISMYGKCKAVVHARKV 67
Query: 67 FDE---SSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGV--DALTVVSVLRAAA 121
FDE + D + W ++++ Y +P+ A+ F +M + G G+ D + VV++L
Sbjct: 68 FDELCYRGICDSVTWNSIVSVYSHCFVPNVAVSLFREM-TVGYGILPDTVGVVNILPVCG 126
Query: 122 MAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYS------ 175
G G+ VHGF V++G V+ D +V +AL+DMY KCG +DA KVF+ M +
Sbjct: 127 YLGLGLCGRQVHGFCVRSGLVE-DVFVGNALVDMYAKCGKMEDANKVFERMRFKDVVTWN 185
Query: 176 ---------------------------YRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSD 208
DVV WS +++GY Q +A+ VF M
Sbjct: 186 AMVTGYSQNGRFEDALSLFGKMREEKIESDVVTWSSVISGYAQRGFGCEAMDVFRQMCGC 245
Query: 209 NVVPNEFTLTSVLSACAHSGALDQGKLVHQY 239
PN TL S+LSACA GAL GK H Y
Sbjct: 246 RCRPNVVTLMSLLSACASVGALLHGKETHCY 276
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 85/267 (31%), Positives = 128/267 (47%), Gaps = 44/267 (16%)
Query: 37 KLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALK 96
+ G D F GNAL+ +A G + A +VF+ KD++ W A++ GY +N +AL
Sbjct: 143 RSGLVEDVFVGNALVDMYAKCGKMEDANKVFERMRFKDVVTWNAMVTGYSQNGRFEDALS 202
Query: 97 CFVKMRST-------------------GTGVDAL----------------TVVSVLRAAA 121
F KMR G G +A+ T++S+L A A
Sbjct: 203 LFGKMREEKIESDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLSACA 262
Query: 122 MAGDDNFGKWVHGFYVQ---AGRVQLDG---YVWSALMDMYFKCGHCDDACKVFDEMPYS 175
G GK H + V+ G D V +AL+DMY KC + A +FDE+
Sbjct: 263 SVGALLHGKETHCYSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAMFDEICPK 322
Query: 176 YRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLS-DN-VVPNEFTLTSVLSACAHSGALDQG 233
RDVV W+V++ GY Q A+++F M DN +VPN+FT++ VL +CA AL+ G
Sbjct: 323 DRDVVTWTVMIGGYAQHGDANHALQLFSEMFKIDNCIVPNDFTISCVLMSCARLSALNFG 382
Query: 234 KLVHQYIECKKVSLNSVE-LGTALVDM 259
K +H Y+ + + + V + L+DM
Sbjct: 383 KQIHAYVLRRSLIYSDVLFVANCLIDM 409
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 68/191 (35%), Positives = 102/191 (53%), Gaps = 7/191 (3%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKD--IIAWTALINGYVKNDLPSEALKCFVKMRSTG 105
NALI +A + A +FDE KD ++ WT +I GY ++ + AL+ F +M
Sbjct: 297 NALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQHGDANHALQLFSEMFKID 356
Query: 106 TGV--DALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDG-YVWSALMDMYFKCGHC 162
+ + T+ VL + A NFGK +H + ++ + D +V + L+DMY K G
Sbjct: 357 NCIVPNDFTISCVLMSCARLSALNFGKQIHAYVLRRSLIYSDVLFVANCLIDMYSKSGDV 416
Query: 163 DDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLS 222
D A VFD M S R+ V W+ L+ GY + +DA RVF M + +VP+ T VL
Sbjct: 417 DTAQVVFDSM--SKRNAVSWTSLLTGYGMHGRSEDAFRVFDEMRKEALVPDGITFLVVLY 474
Query: 223 ACAHSGALDQG 233
AC+HSG +D+G
Sbjct: 475 ACSHSGMVDRG 485
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 76/151 (50%), Gaps = 4/151 (2%)
Query: 45 FAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRST 104
F N LI ++ SG + +A VFD S ++ ++WT+L+ GY + +A + F +MR
Sbjct: 401 FVANCLIDMYSKSGDVDTAQVVFDSMSKRNAVSWTSLLTGYGMHGRSEDAFRVFDEMRKE 460
Query: 105 GTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYV--WSALMDMYFKCGHC 162
D +T + VL A + +G + G ++ FY + +D V ++ ++D+ + G
Sbjct: 461 ALVPDGITFLVVLYACSHSGMVDRG--INLFYRMSKDFGVDPGVEHYACMVDLLGRAGRL 518
Query: 163 DDACKVFDEMPYSYRDVVCWSVLVAGYVQCN 193
+A ++ ++M VV S+L A N
Sbjct: 519 CEATRLINDMSMEPTPVVWISLLSACRTHSN 549
>Medtr1g059810.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:26032045-26029503 | 20130731
Length = 633
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 112/206 (54%), Gaps = 2/206 (0%)
Query: 29 FMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKN 88
F ++ FK GF+ D GN+ ++ + G + +VFDE VKD+I W A+I+GY +N
Sbjct: 181 FCLHGCCFKFGFENDLSVGNSFLTMYVKCGEVEYGRKVFDEILVKDLITWNAMISGYAQN 240
Query: 89 DLPSEALKCFVKMRSTG-TGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGY 147
L+ + +MR G D +T++ VL + A G G+ V + G + + +
Sbjct: 241 GHARRVLEIYREMRKVGGVNPDPVTLLGVLCSCANLGAQGIGREVEKEIDRFG-FRSNSF 299
Query: 148 VWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLS 207
+ +AL++MY +CG+ A +VFD M + VV W+ ++ GY + + A+ +F M+
Sbjct: 300 LMNALINMYARCGNLVRAREVFDCMDERSKSVVSWTAIIGGYGIHGEGETAVELFDVMVR 359
Query: 208 DNVVPNEFTLTSVLSACAHSGALDQG 233
V P+ SVLSAC+H+G ++G
Sbjct: 360 SGVKPDRTVFVSVLSACSHAGLTEKG 385
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 134/257 (52%), Gaps = 11/257 (4%)
Query: 8 PDQHTFPLLLKMFSKPVVEDPF---MIYAQIFKLGFDLDRFAGNALISAFANSGFIGSAC 64
P+ TFP+LLK S ++ PF +++ I K G D + ++LI+ ++ + A
Sbjct: 57 PNTFTFPVLLK--SCALLSLPFTGSQLHSHILKTGSQPDPYTHSSLINMYSKTSLPCLAR 114
Query: 65 QVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGT-GVDALTVVSVLRAAAMA 123
+VFDES V I++ A+I+GY N + EA+K F +M V+++T++ ++ +
Sbjct: 115 KVFDESPVNLTISYNAMISGYTNNMMIVEAIKLFRRMLCENRFFVNSVTMLGLVSGILVP 174
Query: 124 GDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWS 183
G +HG + G + D V ++ + MY KCG + KVFDE+ +D++ W+
Sbjct: 175 EKLRLGFCLHGCCFKFG-FENDLSVGNSFLTMYVKCGEVEYGRKVFDEI--LVKDLITWN 231
Query: 184 VLVAGYVQCNKFQDAIRVFWNMLS-DNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIEC 242
+++GY Q + + ++ M V P+ TL VL +CA+ GA G+ V + I+
Sbjct: 232 AMISGYAQNGHARRVLEIYREMRKVGGVNPDPVTLLGVLCSCANLGAQGIGREVEKEIDR 291
Query: 243 KKVSLNSVELGTALVDM 259
NS L AL++M
Sbjct: 292 FGFRSNSF-LMNALINM 307
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 75/174 (43%), Gaps = 7/174 (4%)
Query: 62 SACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAA 121
S+ V ES AW + K EAL + M + + T +L++ A
Sbjct: 11 SSPPVPGESKQNPTTAWNCYLRELSKQRKFMEALTVYRHMLRSSFFPNTFTFPVLLKSCA 70
Query: 122 MAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVC 181
+ G +H ++ G Q D Y S+L++MY K A KVFDE P + +
Sbjct: 71 LLSLPFTGSQLHSHILKTGS-QPDPYTHSSLINMYSKTSLPCLARKVFDESPVNL--TIS 127
Query: 182 WSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKL 235
++ +++GY +AI++F ML + N F + SV SG L KL
Sbjct: 128 YNAMISGYTNNMMIVEAIKLFRRMLCE----NRFFVNSVTMLGLVSGILVPEKL 177
>Medtr2g021710.1 | PPR containing plant-like protein | HC |
chr2:7399056-7396074 | 20130731
Length = 727
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 116/242 (47%), Gaps = 33/242 (13%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTG 107
N +++ +A +G + A ++FD KD+I+W +I+GY++ EAL+ + M TG G
Sbjct: 255 NVMLNGYAKTGLVDEARELFDGICDKDVISWGTMIDGYIQKGRLREALEIYRAMLQTGHG 314
Query: 108 VDALTVVSVLRAAAMAGDDNFGKWVHG-------------------FYVQAGRVQLDGY- 147
+ + +V+++ A G +HG FY G + L
Sbjct: 315 PNEVMIVNLVSACGRGTAIVDGWQLHGTVVKRGFDCYNFIQTTIIYFYAACGMMDLACLQ 374
Query: 148 ----------VWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQD 197
W+AL + K G D A K FD+M RDV WS +++GY Q +
Sbjct: 375 FEVGVKDHLESWNALTAGFIKNGMMDHALKTFDKM--HVRDVFSWSTMISGYAQSEHPKM 432
Query: 198 AIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALV 257
A+ +F ML+ + PNE T+ SV SA A G L +GKL H+Y+ + + N L AL+
Sbjct: 433 ALELFHKMLAGGIKPNEVTMVSVFSAIATLGTLQEGKLAHEYMRSESIPFND-NLRAALI 491
Query: 258 DM 259
DM
Sbjct: 492 DM 493
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 106/194 (54%), Gaps = 1/194 (0%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTG 107
NAL + F +G + A + FD+ V+D+ +W+ +I+GY +++ P AL+ F KM + G
Sbjct: 387 NALTAGFIKNGMMDHALKTFDKMHVRDVFSWSTMISGYAQSEHPKMALELFHKMLAGGIK 446
Query: 108 VDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACK 167
+ +T+VSV A A G GK H Y+++ + + + +AL+DMY KCG + A +
Sbjct: 447 PNEVTMVSVFSAIATLGTLQEGKLAHE-YMRSESIPFNDNLRAALIDMYAKCGSINSALQ 505
Query: 168 VFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHS 227
F+++ V W+ ++ G + VF +M ++ PN T VLSAC H+
Sbjct: 506 FFNQIRDEVSSVSPWNAIICGLASHGHASMCLEVFSDMQRFHIKPNPITFIGVLSACCHA 565
Query: 228 GALDQGKLVHQYIE 241
G ++ GK + + ++
Sbjct: 566 GLVESGKRIFKTMK 579
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 113/235 (48%), Gaps = 31/235 (13%)
Query: 33 AQIFKLGF-DLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLP 91
AQ+ GF LD + N ++S + +G I +A ++FD K +++T +I G+V+N
Sbjct: 107 AQLLFDGFATLDSVSCNIMVSGYVRNGQIDNARKLFDVMPNKGCVSYTTMIMGFVQNGFF 166
Query: 92 SEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSA 151
EAL+ F MRS G + LT+V+V+ A + G+ + VHG V+ V L V +
Sbjct: 167 REALEVFKDMRSCGVVPNDLTLVNVISACSHLGEVLNCRMVHGLVVKMFVVGLV-IVSTN 225
Query: 152 LMDMYFKCGHCDDACKVFDEMPYSY-----------------------------RDVVCW 182
LM Y C +A ++FDEMP +DV+ W
Sbjct: 226 LMHAYCLCSGVREARRLFDEMPERNLVTWNVMLNGYAKTGLVDEARELFDGICDKDVISW 285
Query: 183 SVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVH 237
++ GY+Q + ++A+ ++ ML PNE + +++SAC A+ G +H
Sbjct: 286 GTMIDGYIQKGRLREALEIYRAMLQTGHGPNEVMIVNLVSACGRGTAIVDGWQLH 340
>Medtr8g069550.1 | PPR containing plant-like protein | HC |
chr8:29180878-29178605 | 20130731
Length = 757
Score = 117 bits (294), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 131/239 (54%), Gaps = 4/239 (1%)
Query: 1 MRQKGVEPDQHTF-PLLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M+ + ++ DQ+TF +L +++ ++A I + + + F +AL+ +
Sbjct: 275 MKLENLQMDQYTFGSVLTACGCVMALQEGKQVHAYIIRTDYKDNIFVASALVVMYCKCKN 334
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
I SA VF + + K++++WTA++ GY +N EA+K F M+ G D T+ SV+ +
Sbjct: 335 IKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISS 394
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
A G H + +G + V +AL+ +Y KCG +D+ ++F+E+ S++D
Sbjct: 395 CANLASLEEGAQFHARALTSGLISFIT-VSNALVTLYGKCGSIEDSHRLFNEI--SFKDE 451
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQ 238
V W+ LV+GY Q K + I +F +ML+ + P++ T VLSAC+ +G +++G + +
Sbjct: 452 VTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFE 510
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 125/258 (48%), Gaps = 35/258 (13%)
Query: 12 TFPLLLKMFSKP-VVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDES 70
TF LL + SK V+ I+ + K GF F G+ L+ ++ G I A +VFDE
Sbjct: 154 TFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDEL 213
Query: 71 SVKDI-------------------------------IAWTALINGYVKNDLPSEALKCFV 99
K++ I+WT++I G+ +N L +A+ F
Sbjct: 214 PEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFR 273
Query: 100 KMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKC 159
+M+ +D T SVL A GK VH + ++ + + +V SAL+ MY KC
Sbjct: 274 EMKLENLQMDQYTFGSVLTACGCVMALQEGKQVHAYIIRTD-YKDNIFVASALVVMYCKC 332
Query: 160 GHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTS 219
+ A VF +M + ++VV W+ ++ GY Q ++A++ F +M + P++FTL S
Sbjct: 333 KNIKSAEAVFKKM--TCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGS 390
Query: 220 VLSACAHSGALDQGKLVH 237
V+S+CA+ +L++G H
Sbjct: 391 VISSCANLASLEEGAQFH 408
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 113/227 (49%), Gaps = 32/227 (14%)
Query: 45 FAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCF-VKMRS 103
++ N ++SA++ G + +FD +D ++W +LI+GY L +++K + + +++
Sbjct: 85 YSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKN 144
Query: 104 TGT-GVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHC 162
G+ ++ +T ++L A+ G G+ +HG V+ G + +V S L+DMY K G
Sbjct: 145 DGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYV-FVGSPLVDMYSKMGMI 203
Query: 163 DDACKVFDEMP-----------------------------YSYRDVVCWSVLVAGYVQCN 193
A KVFDE+P RD + W+ ++ G+ Q
Sbjct: 204 SCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNG 263
Query: 194 KFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYI 240
+DAI +F M +N+ +++T SVL+AC AL +GK VH YI
Sbjct: 264 LDRDAIDIFREMKLENLQMDQYTFGSVLTACGCVMALQEGKQVHAYI 310
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 95/189 (50%), Gaps = 4/189 (2%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M++ G+EPD T ++ + +E+ +A+ G NAL++ + G
Sbjct: 376 MQKYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGS 435
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
I + ++F+E S KD + WTAL++GY + +E + F M + G D +T + VL A
Sbjct: 436 IEDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSA 495
Query: 120 AAMAGDDNFGKWV-HGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRD 178
+ AG G + + G V + + ++ ++D++ + G ++A ++MP+S D
Sbjct: 496 CSRAGLVEKGNQIFESMINEHGIVPIQDH-YTCMIDLFSRAGRIEEARNFINKMPFS-PD 553
Query: 179 VVCWSVLVA 187
+ W+ L++
Sbjct: 554 AISWATLLS 562
>Medtr8g069550.2 | PPR containing plant-like protein | HC |
chr8:29180878-29178605 | 20130731
Length = 757
Score = 117 bits (294), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 131/239 (54%), Gaps = 4/239 (1%)
Query: 1 MRQKGVEPDQHTF-PLLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M+ + ++ DQ+TF +L +++ ++A I + + + F +AL+ +
Sbjct: 275 MKLENLQMDQYTFGSVLTACGCVMALQEGKQVHAYIIRTDYKDNIFVASALVVMYCKCKN 334
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
I SA VF + + K++++WTA++ GY +N EA+K F M+ G D T+ SV+ +
Sbjct: 335 IKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISS 394
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
A G H + +G + V +AL+ +Y KCG +D+ ++F+E+ S++D
Sbjct: 395 CANLASLEEGAQFHARALTSGLISFIT-VSNALVTLYGKCGSIEDSHRLFNEI--SFKDE 451
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQ 238
V W+ LV+GY Q K + I +F +ML+ + P++ T VLSAC+ +G +++G + +
Sbjct: 452 VTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFE 510
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 125/258 (48%), Gaps = 35/258 (13%)
Query: 12 TFPLLLKMFSKP-VVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDES 70
TF LL + SK V+ I+ + K GF F G+ L+ ++ G I A +VFDE
Sbjct: 154 TFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDEL 213
Query: 71 SVKDI-------------------------------IAWTALINGYVKNDLPSEALKCFV 99
K++ I+WT++I G+ +N L +A+ F
Sbjct: 214 PEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFR 273
Query: 100 KMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKC 159
+M+ +D T SVL A GK VH + ++ + + +V SAL+ MY KC
Sbjct: 274 EMKLENLQMDQYTFGSVLTACGCVMALQEGKQVHAYIIRTD-YKDNIFVASALVVMYCKC 332
Query: 160 GHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTS 219
+ A VF +M + ++VV W+ ++ GY Q ++A++ F +M + P++FTL S
Sbjct: 333 KNIKSAEAVFKKM--TCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGS 390
Query: 220 VLSACAHSGALDQGKLVH 237
V+S+CA+ +L++G H
Sbjct: 391 VISSCANLASLEEGAQFH 408
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 113/227 (49%), Gaps = 32/227 (14%)
Query: 45 FAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCF-VKMRS 103
++ N ++SA++ G + +FD +D ++W +LI+GY L +++K + + +++
Sbjct: 85 YSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKN 144
Query: 104 TGT-GVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHC 162
G+ ++ +T ++L A+ G G+ +HG V+ G + +V S L+DMY K G
Sbjct: 145 DGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYV-FVGSPLVDMYSKMGMI 203
Query: 163 DDACKVFDEMP-----------------------------YSYRDVVCWSVLVAGYVQCN 193
A KVFDE+P RD + W+ ++ G+ Q
Sbjct: 204 SCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNG 263
Query: 194 KFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYI 240
+DAI +F M +N+ +++T SVL+AC AL +GK VH YI
Sbjct: 264 LDRDAIDIFREMKLENLQMDQYTFGSVLTACGCVMALQEGKQVHAYI 310
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 95/189 (50%), Gaps = 4/189 (2%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M++ G+EPD T ++ + +E+ +A+ G NAL++ + G
Sbjct: 376 MQKYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGS 435
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
I + ++F+E S KD + WTAL++GY + +E + F M + G D +T + VL A
Sbjct: 436 IEDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSA 495
Query: 120 AAMAGDDNFGKWV-HGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRD 178
+ AG G + + G V + + ++ ++D++ + G ++A ++MP+S D
Sbjct: 496 CSRAGLVEKGNQIFESMINEHGIVPIQDH-YTCMIDLFSRAGRIEEARNFINKMPFS-PD 553
Query: 179 VVCWSVLVA 187
+ W+ L++
Sbjct: 554 AISWATLLS 562
>Medtr7g016960.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:5362710-5366096 | 20130731
Length = 654
Score = 117 bits (294), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 118/212 (55%), Gaps = 9/212 (4%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
I+A I + G++ L+ +A G++ A VF K+I++W+A+I Y KN++
Sbjct: 201 IHAHILRHGYEGHVHVMTTLLDVYARFGYVSYASSVFGAMPDKNIVSWSAMIACYAKNEM 260
Query: 91 PSEALKCF--VKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGY- 147
P +AL+ F + + + T + +T+VSVL+A A GK VH + ++ G LD
Sbjct: 261 PMKALELFQIMMLEACDTVPNPITMVSVLQACASLAALEHGKLVHAYVLRRG---LDSTL 317
Query: 148 -VWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNML 206
V + L+ MY +CG +VFD M RDV+ W+ L++ Y + AI++F NM+
Sbjct: 318 PVLNTLITMYGRCGEISTGQRVFDYM--KKRDVISWNSLISIYGMHGLGKKAIQIFENMI 375
Query: 207 SDNVVPNEFTLTSVLSACAHSGALDQGKLVHQ 238
+ V P+ T +VL AC+H+G +++ K++ +
Sbjct: 376 NRGVSPSYITFITVLCACSHAGLVEEAKILFE 407
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 116/240 (48%), Gaps = 10/240 (4%)
Query: 8 PDQHTFPLLLKM-FSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQV 66
P + TF LL+ + + D ++ ++ G D D + LI+ + + G + AC+V
Sbjct: 72 PTKKTFELLINSCIEQNSLSDGVDVHHRLVGSGLDQDPYLATKLINMYCDLGSVDHACKV 131
Query: 67 FDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDD 126
FDE+ K I W A+ + L + +M G + T VL+A ++
Sbjct: 132 FDETREKTIFVWNAIFRALAMASRGEDLLVLYGQMNWIGIPSNRFTYTYVLKACVVSELS 191
Query: 127 ----NFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCW 182
GK +H ++ G + +V + L+D+Y + G+ A VF MP +++V W
Sbjct: 192 ICPLRKGKEIHAHILRHG-YEGHVHVMTTLLDVYARFGYVSYASSVFGAMP--DKNIVSW 248
Query: 183 SVLVAGYVQCNKFQDAIRVFWNMLSD--NVVPNEFTLTSVLSACAHSGALDQGKLVHQYI 240
S ++A Y + A+ +F M+ + + VPN T+ SVL ACA AL+ GKLVH Y+
Sbjct: 249 SAMIACYAKNEMPMKALELFQIMMLEACDTVPNPITMVSVLQACASLAALEHGKLVHAYV 308
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 80/169 (47%)
Query: 25 VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALING 84
+E +++A + + G D N LI+ + G I + +VFD +D+I+W +LI+
Sbjct: 298 LEHGKLVHAYVLRRGLDSTLPVLNTLITMYGRCGEISTGQRVFDYMKKRDVISWNSLISI 357
Query: 85 YVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQL 144
Y + L +A++ F M + G +T ++VL A + AG K + + R+
Sbjct: 358 YGMHGLGKKAIQIFENMINRGVSPSYITFITVLCACSHAGLVEEAKILFESMLNKYRIHP 417
Query: 145 DGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCN 193
++ ++D+ + D+A ++ M + V S+L + + CN
Sbjct: 418 RMEHYACMVDILGRANRLDEAIELIQNMDFKPGPTVWGSLLGSCRIHCN 466
>Medtr1g099590.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:44985847-44989750 | 20130731
Length = 912
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 129/250 (51%), Gaps = 2/250 (0%)
Query: 10 QHTFPLLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDE 69
Q T +L + +++ I++ I KLG D + N L+S +A + + A +FDE
Sbjct: 15 QETCLRVLSFCNSNSLKEGICIHSPIIKLGLQHDLYLTNNLLSLYAKTFGVHRARHLFDE 74
Query: 70 SSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFG 129
+D+++WT +++ + K S+AL+ F M +G + T+ S LR+ G+ G
Sbjct: 75 MPNRDVVSWTTILSSHTKTKHHSDALQLFDMMIGSGEYPNEFTLSSALRSCFALGEFERG 134
Query: 130 KWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGY 189
+H V+ G ++++ +V ++L++ Y KCG C + DVV W+ +++
Sbjct: 135 MQIHCSAVKLG-LEMNRFVGTSLVEFYTKCGCCSVEAWKLLSLVKDGGDVVSWTTMLSSL 193
Query: 190 VQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNS 249
V+ K+ +A ++ M+ V PNEFT +L A + L GKL+H ++ LN
Sbjct: 194 VENGKWGEAFEIYVKMIESGVYPNEFTFVKLLGAVSSFLGLSYGKLLHAHLIMFGAELNL 253
Query: 250 VELGTALVDM 259
V L TA+VDM
Sbjct: 254 V-LKTAVVDM 262
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 136/266 (51%), Gaps = 15/266 (5%)
Query: 1 MRQKGVEPDQHTFPLLLKM-FSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M G P++ T L+ F+ E I+ KLG +++RF G +L+ + G
Sbjct: 106 MIGSGEYPNEFTLSSALRSCFALGEFERGMQIHCSAVKLGLEMNRFVGTSLVEFYTKCG- 164
Query: 60 IGSACQVFD---ESSVKD---IIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTV 113
C V S VKD +++WT +++ V+N EA + +VKM +G + T
Sbjct: 165 ---CCSVEAWKLLSLVKDGGDVVSWTTMLSSLVENGKWGEAFEIYVKMIESGVYPNEFTF 221
Query: 114 VSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMP 173
V +L A + ++GK +H + G +L+ + +A++DMY KC DA KV + P
Sbjct: 222 VKLLGAVSSFLGLSYGKLLHAHLIMFG-AELNLVLKTAVVDMYSKCRRMVDAIKVSNLTP 280
Query: 174 YSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
DV W+ L++G+ Q + ++AI VF +M ++PN FT +S+L+A + +LD G
Sbjct: 281 E--YDVYLWTTLISGFTQNLQVREAISVFRDMELSGLLPNNFTYSSLLNASSSILSLDLG 338
Query: 234 KLVHQYIECKKVSLNSVELGTALVDM 259
+ H + + + + +G ALVDM
Sbjct: 339 EQFHSRVIIVGLE-DDLYIGNALVDM 363
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 113/234 (48%), Gaps = 4/234 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDP-FMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M+ GV P+ T +L SK P M++ I K D+D NAL+ +A G
Sbjct: 411 MQAAGVRPNSFTMSAILGACSKTRSLVPTMMLHGHIIKTKVDIDIAVANALVDTYAGVGM 470
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
I A V +++D I +T L + ALK + M + G +D ++ S L A
Sbjct: 471 IDEAWSVIGTMNLRDSITYTCLAARLNQKGHHGMALKVLIHMCNDGIKMDEFSLASFLSA 530
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
AA G GK +H + V++G Q V ++L+ +Y KCG DA + F ++ S D
Sbjct: 531 AAGLGTMETGKQLHCYSVKSG-FQRCHSVSNSLVHLYSKCGSIHDANRAFKDI--SEPDA 587
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
W+ L++G+ A+ F +M V P+ TL S++SAC+H G L+ G
Sbjct: 588 FSWNGLISGFSWNGLISHALSTFDDMRLAGVKPDSITLLSLISACSHGGLLELG 641
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 123/241 (51%), Gaps = 6/241 (2%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVED-PFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M G+ P+ T+ LL S + D ++++ +G + D + GNAL+ +
Sbjct: 310 MELSGLLPNNFTYSSLLNASSSILSLDLGEQFHSRVIIVGLEDDLYIGNALVDMYMKCSH 369
Query: 60 IGS-ACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLR 118
I + A +VF E + +++ WT+LI G+ + L ++ + F +M++ G ++ T+ ++L
Sbjct: 370 ITTNAVKVFREITSPNVMCWTSLIAGFAEKRL-EDSFQLFAEMQAAGVRPNSFTMSAILG 428
Query: 119 AAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRD 178
A + +HG ++ +V +D V +AL+D Y G D+A V M + RD
Sbjct: 429 ACSKTRSLVPTMMLHGHIIKT-KVDIDIAVANALVDTYAGVGMIDEAWSVIGTM--NLRD 485
Query: 179 VVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQ 238
+ ++ L A Q A++V +M +D + +EF+L S LSA A G ++ GK +H
Sbjct: 486 SITYTCLAARLNQKGHHGMALKVLIHMCNDGIKMDEFSLASFLSAAAGLGTMETGKQLHC 545
Query: 239 Y 239
Y
Sbjct: 546 Y 546
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 78/159 (49%), Gaps = 4/159 (2%)
Query: 37 KLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALK 96
K GF N+L+ ++ G I A + F + S D +W LI+G+ N L S AL
Sbjct: 549 KSGFQRCHSVSNSLVHLYSKCGSIHDANRAFKDISEPDAFSWNGLISGFSWNGLISHALS 608
Query: 97 CFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFG-KWVHGFYVQAGRV-QLDGYVWSALMD 154
F MR G D++T++S++ A + G G ++ H + +LD Y+ L+D
Sbjct: 609 TFDDMRLAGVKPDSITLLSLISACSHGGLLELGLEYFHSMQKEYHITPKLDHYM--CLVD 666
Query: 155 MYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCN 193
+ + G ++A V ++M + ++C ++L A + N
Sbjct: 667 LLGRGGRLEEAMGVIEKMSFKPDSLICKTLLNACNLHGN 705
>Medtr4g094502.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:38095334-38099255 | 20130731
Length = 653
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 121/233 (51%), Gaps = 7/233 (3%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFI 60
M + GV P+ +TF +L+ + + D +++ I K G + D F +ALI A++ G +
Sbjct: 176 MIRDGVMPNMYTFSSVLRACER--LCDLKQVHSGILKAGLESDVFVRSALIDAYSKLGEL 233
Query: 61 GSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAA 120
A VF E D + W ++I + ++ EAL + MR G D T+ SVLRA
Sbjct: 234 LEAVGVFREMVTGDSVVWNSIIAAFAQHSDGDEALALYKSMRREGFPADQSTLTSVLRAC 293
Query: 121 AMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVV 180
+ G+ VH V + D + +AL+DMY KCG +DA +F M + +DV+
Sbjct: 294 TGSSLLELGRQVH---VHVLKFDQDLILNNALLDMYCKCGSLEDAKFIFSRM--AVKDVI 348
Query: 181 CWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
WS +++G Q +A+ +F +M PN T+ VL AC+H+G +++G
Sbjct: 349 SWSTMISGLAQNGFSVEALNLFDSMKVSGPRPNYITILGVLFACSHAGLVNEG 401
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 120/241 (49%), Gaps = 7/241 (2%)
Query: 1 MRQKGVEPDQHTFPLLLKM-FSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M ++GV D + L+K + V + ++ IF G+ F N L++ +
Sbjct: 75 MEKRGVFADAIAYSELIKCCLAHKAVREGKRVHNHIFSNGYRPKTFLINTLLNMYVKLNL 134
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ A VFD+ +++++WT +I+ Y L A+K V M G + T SVLRA
Sbjct: 135 LEEAQMVFDKMPERNVVSWTTMISAYSYAKLNDRAMKLLVFMIRDGVMPNMYTFSSVLRA 194
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
D K VH ++AG ++ D +V SAL+D Y K G +A VF EM D
Sbjct: 195 CERLCD---LKQVHSGILKAG-LESDVFVRSALIDAYSKLGELLEAVGVFREMVTG--DS 248
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQY 239
V W+ ++A + Q + +A+ ++ +M + ++ TLTSVL AC S L+ G+ VH +
Sbjct: 249 VVWNSIIAAFAQHSDGDEALALYKSMRREGFPADQSTLTSVLRACTGSSLLELGRQVHVH 308
Query: 240 I 240
+
Sbjct: 309 V 309
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 94/192 (48%), Gaps = 14/192 (7%)
Query: 1 MRQKGVEPDQHTFPLLLKMFS-KPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
MR++G DQ T +L+ + ++E ++ + K FD D NAL+ + G
Sbjct: 274 MRREGFPADQSTLTSVLRACTGSSLLELGRQVHVHVLK--FDQDLILNNALLDMYCKCGS 331
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ A +F +VKD+I+W+ +I+G +N EAL F M+ +G + +T++ VL A
Sbjct: 332 LEDAKFIFSRMAVKDVISWSTMISGLAQNGFSVEALNLFDSMKVSGPRPNYITILGVLFA 391
Query: 120 AAMAGDDNFG----KWVHGFY-VQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPY 174
+ AG N G + + Y + GR +S L+D+ + G D+ K+ EM
Sbjct: 392 CSHAGLVNEGWGYFRSMKNLYGIDPGREH-----YSCLLDLLGRAGKLDEMVKLIHEMTC 446
Query: 175 SYRDVVCWSVLV 186
DVV W L+
Sbjct: 447 E-PDVVTWRTLL 457
>Medtr3g098230.1 | PPR containing plant-like protein | HC |
chr3:44828973-44831769 | 20130731
Length = 873
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 119/233 (51%), Gaps = 9/233 (3%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIG-SACQVFDESSVKDIIAWTALINGYVKND 89
++ + K GF++D FAGNAL+S +A G + A VFD KD+++W A+I G +N
Sbjct: 168 VHGYVIKSGFEMDTFAGNALVSMYAKCGLVACDAYAVFDSIIHKDVVSWNAMIAGLAENG 227
Query: 90 LPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNF----GKWVHGFYVQAGRVQLD 145
L EA F M + TV ++L A + D+N G+ +H + +Q + D
Sbjct: 228 LLKEAFSLFSLMMKGSVKPNYATVANILPVCA-SFDENIAHRCGRQIHSYVLQWPELSAD 286
Query: 146 GYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNM 205
V +AL+ Y K G +A +F M RD+V W+ ++AGY ++ ++ VF N+
Sbjct: 287 VSVCNALLSFYLKVGRTKEAESLFWAM--DARDLVSWNTIIAGYALNGEWLKSLHVFGNL 344
Query: 206 LS-DNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALV 257
+S + ++ + T+ S+L ACA L GK VH YI G ALV
Sbjct: 345 VSLEMLLLDSVTMVSILPACAQLDNLQAGKQVHAYILRHPFLFEDTSAGNALV 397
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 128/243 (52%), Gaps = 14/243 (5%)
Query: 7 EPDQHTFPLLLKMFSKPVVED-PFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQ 65
+PD +LK S + + +++ + K G AL++ +A G + +
Sbjct: 40 KPDHEVLAAILKSCSALLASNLGKCLHSYVVKQGHVSCHVTSKALLNMYAKCGMLDDCHK 99
Query: 66 VFDESSVKDIIAWTALINGYV---KNDLPSEALKCFVKMRSTGTGV-DALTVVSVLRAAA 121
+FD+ D + W +++GY KND ++ +K F M S+G + ++T+ +VL A
Sbjct: 100 LFDQFGRCDPVIWNIVLSGYSRSGKND--ADVMKVFRAMHSSGEVMPSSVTIATVLPVCA 157
Query: 122 MAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCD-DACKVFDEMPYSYRDVV 180
+G+ N GK VHG+ +++G ++D + +AL+ MY KCG DA VFD + + +DVV
Sbjct: 158 RSGNLNGGKSVHGYVIKSG-FEMDTFAGNALVSMYAKCGLVACDAYAVFDSIIH--KDVV 214
Query: 181 CWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACA---HSGALDQGKLVH 237
W+ ++AG + ++A +F M+ +V PN T+ ++L CA + A G+ +H
Sbjct: 215 SWNAMIAGLAENGLLKEAFSLFSLMMKGSVKPNYATVANILPVCASFDENIAHRCGRQIH 274
Query: 238 QYI 240
Y+
Sbjct: 275 SYV 277
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 100/194 (51%), Gaps = 4/194 (2%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTG 107
N+LIS + G A +F S D+ W ++ Y +ND P +AL+ F+K+++ G
Sbjct: 530 NSLISGYVGLGSHYDANMIFSGMSETDLTTWNLMVRVYAENDCPEQALELFLKLQTQGMK 589
Query: 108 VDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACK 167
D +T++S++ + + HG+ +++ L ++ L+D Y KCG A K
Sbjct: 590 PDVVTIMSLIPVCTQMASVHLLRQCHGYIIRSSFEDL--HLKGTLLDAYAKCGIIGYAYK 647
Query: 168 VFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHS 227
+F +D+V ++ ++ GY + A+ F +ML+ + P+ TS+LSAC+H+
Sbjct: 648 IFQS--SVDKDLVMFTAMIGGYAMHGMSEKALETFSHMLNMGIKPDHVIFTSILSACSHA 705
Query: 228 GALDQGKLVHQYIE 241
G + +G + IE
Sbjct: 706 GRIAEGLKIFDSIE 719
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 116/262 (44%), Gaps = 37/262 (14%)
Query: 31 IYAQIFKLGFDL-DRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKND 89
++A I + F D AGNAL+S +A G+I A F S KD+I+W ++++ + +
Sbjct: 376 VHAYILRHPFLFEDTSAGNALVSFYAKCGYIEEAYHTFSMISRKDLISWNSILDAFGEKR 435
Query: 90 LPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRV--QLDGY 147
S L M D++T+++++ A K +HG+ +++G +
Sbjct: 436 HHSRFLSLLHVMLKLDIRPDSVTILTIIHFCASLLRVKKVKEIHGYSIRSGSLLCATAPT 495
Query: 148 VWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVF----- 202
V +A++D Y KCG+ + A K+F + R++V + L++GYV DA +F
Sbjct: 496 VGNAILDAYSKCGNIEYANKMFQNLS-EKRNLVTCNSLISGYVGLGSHYDANMIFSGMSE 554
Query: 203 -----WNML---------------------SDNVVPNEFTLTSVLSACAHSGALDQGKLV 236
WN++ + + P+ T+ S++ C ++ +
Sbjct: 555 TDLTTWNLMVRVYAENDCPEQALELFLKLQTQGMKPDVVTIMSLIPVCTQMASVHLLRQC 614
Query: 237 HQYIECKKVSLNSVELGTALVD 258
H YI + S + L L+D
Sbjct: 615 HGYI--IRSSFEDLHLKGTLLD 634
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 95/193 (49%), Gaps = 3/193 (1%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTG 107
NAL+S + G A +F +D+++W +I GY N ++L F + S
Sbjct: 291 NALLSFYLKVGRTKEAESLFWAMDARDLVSWNTIIAGYALNGEWLKSLHVFGNLVSLEML 350
Query: 108 V-DALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDAC 166
+ D++T+VS+L A A + GK VH + ++ + D +AL+ Y KCG+ ++A
Sbjct: 351 LLDSVTMVSILPACAQLDNLQAGKQVHAYILRHPFLFEDTSAGNALVSFYAKCGYIEEAY 410
Query: 167 KVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAH 226
F + S +D++ W+ ++ + + + + ML ++ P+ T+ +++ CA
Sbjct: 411 HTFSMI--SRKDLISWNSILDAFGEKRHHSRFLSLLHVMLKLDIRPDSVTILTIIHFCAS 468
Query: 227 SGALDQGKLVHQY 239
+ + K +H Y
Sbjct: 469 LLRVKKVKEIHGY 481
>Medtr8g027150.1 | PPR containing plant-like protein | HC |
chr8:9538952-9542067 | 20130731
Length = 506
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 132/271 (48%), Gaps = 35/271 (12%)
Query: 1 MRQKGVEPDQHTFPLLLKM-FSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M G P+Q+TF L S + MI+ Q K GF D FA AL+ +A G
Sbjct: 70 MYLHGHSPNQYTFNFLFTTCTSLSSLSLGQMIHTQFMKSGFKHDVFASTALLDMYAKLGC 129
Query: 60 IGSACQVFDESSVKD-------------------------------IIAWTALINGYVKN 88
+ A VFDE SVK+ +++WT +++GY++N
Sbjct: 130 LKFARNVFDEMSVKELATWNAMMAGCTRFGDMERALELFWLMPSRNVVSWTTMVSGYLQN 189
Query: 89 DLPSEALKCFVKM-RSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGY 147
+AL F++M R + +T+ SVL A A G G+ V + + G + + +
Sbjct: 190 KQYEKALGLFMRMEREKDVSPNEVTLASVLPACANLGALEIGQRVEVYARKNGFFK-NLF 248
Query: 148 VWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLS 207
V +A+++MY KCG D A KVFDE+ +R++ W+ ++ G + AI+++ ML
Sbjct: 249 VCNAVLEMYAKCGKIDVAWKVFDEIG-RFRNLCSWNSMIMGLAVHGQCHKAIQLYDQMLR 307
Query: 208 DNVVPNEFTLTSVLSACAHSGALDQGKLVHQ 238
+ +P++ T +L AC H G +++GK V Q
Sbjct: 308 EGTLPDDVTFVGLLLACTHGGMVEKGKHVFQ 338
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 72/143 (50%), Gaps = 31/143 (21%)
Query: 127 NFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSY---------- 176
+ G+ +H ++++G + D + +AL+DMY K G A VFDEM
Sbjct: 96 SLGQMIHTQFMKSG-FKHDVFASTALLDMYAKLGCLKFARNVFDEMSVKELATWNAMMAG 154
Query: 177 -------------------RDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSD-NVVPNEFT 216
R+VV W+ +V+GY+Q +++ A+ +F M + +V PNE T
Sbjct: 155 CTRFGDMERALELFWLMPSRNVVSWTTMVSGYLQNKQYEKALGLFMRMEREKDVSPNEVT 214
Query: 217 LTSVLSACAHSGALDQGKLVHQY 239
L SVL ACA+ GAL+ G+ V Y
Sbjct: 215 LASVLPACANLGALEIGQRVEVY 237
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 84/191 (43%), Gaps = 7/191 (3%)
Query: 2 RQKGVEPDQHTFPLLLKM---FSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSG 58
R+K V P++ T +L + +YA+ K GF + F NA++ +A G
Sbjct: 204 REKDVSPNEVTLASVLPACANLGALEIGQRVEVYAR--KNGFFKNLFVCNAVLEMYAKCG 261
Query: 59 FIGSACQVFDE-SSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVL 117
I A +VFDE +++ +W ++I G + +A++ + +M GT D +T V +L
Sbjct: 262 KIDVAWKVFDEIGRFRNLCSWNSMIMGLAVHGQCHKAIQLYDQMLREGTLPDDVTFVGLL 321
Query: 118 RAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYR 177
A G GK V + + + ++D+ + G +A +V MP
Sbjct: 322 LACTHGGMVEKGKHVFQSMTRDFNIIPKLEHYGCMVDLLGRAGRLTEAYEVIKRMPMK-P 380
Query: 178 DVVCWSVLVAG 188
D V W L+
Sbjct: 381 DSVIWGTLLGA 391
>Medtr2g058990.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:24361845-24364937 | 20130731
Length = 975
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 121/234 (51%), Gaps = 4/234 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
MR G+EPD T LL ++ + I+ + + GF+LD F +L+S + G
Sbjct: 493 MRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNGFELDEFICISLVSLYVQCGK 552
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
I A FD K+++ W +ING+ +N+ P +AL F +M S+ D ++++ L A
Sbjct: 553 ILLAKLFFDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDEISIIGALGA 612
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
+ GK +H F V++ + +V +L+DMY KCG + + +FD + +
Sbjct: 613 CSQVSALRLGKELHCFAVKSHLTE-HSFVTCSLIDMYAKCGCMEQSQNIFDRV--HLKGE 669
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
V W+VL+ GY + AI +F +M + P+ T ++L+AC H+G + +G
Sbjct: 670 VTWNVLITGYGIHGHGRKAIELFKSMQNAGFRPDSVTFIALLTACNHAGLVAEG 723
Score = 114 bits (285), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 116/223 (52%), Gaps = 12/223 (5%)
Query: 23 PVVEDPFM------IYAQIFKLGF-DLDRFAGNALISAFANSGFIGSACQVFDESSVKDI 75
PV E+ I+ + GF D NA ++ +A G + A VF K +
Sbjct: 408 PVCEEEIQFLKLKEIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGMESKMV 467
Query: 76 IAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGF 135
+W ALI G+V+N P +AL ++ MR +G D T+ S+L A A + GK +HG
Sbjct: 468 SSWNALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGS 527
Query: 136 YVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKF 195
++ G +LD ++ +L+ +Y +CG A FD M +++VCW+ ++ G+ Q N+F
Sbjct: 528 MLRNG-FELDEFICISLVSLYVQCGKILLAKLFFDNM--EEKNLVCWNTMINGFSQ-NEF 583
Query: 196 Q-DAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVH 237
DA+ +F MLS + P+E ++ L AC+ AL GK +H
Sbjct: 584 PFDALDMFHQMLSSKIWPDEISIIGALGACSQVSALRLGKELH 626
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 106/200 (53%), Gaps = 7/200 (3%)
Query: 43 DRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMR 102
D F GNALI+ + GF+ SA +VFD+ +++++W +++ ++N + E+ F +
Sbjct: 230 DVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGVFEESYGLFKGLL 289
Query: 103 STGTGV--DALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCG 160
+ G+ D T+V+V+ A G+ G HG ++ G + V S+L+DMY KCG
Sbjct: 290 NGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCG-ELKVNSSLLDMYSKCG 348
Query: 161 HCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNM-LSDNVVPNEFTLTS 219
+ +A +FD + ++V+ W+ ++ GY + F+ A + M + D V NE TL +
Sbjct: 349 YLCEARVLFDT---NEKNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLN 405
Query: 220 VLSACAHSGALDQGKLVHQY 239
VL C + K +H Y
Sbjct: 406 VLPVCEEEIQFLKLKEIHGY 425
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 114/200 (57%), Gaps = 7/200 (3%)
Query: 63 ACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGV-DALTVVSVLRAAA 121
+C VF+ S K++ W AL++GY++N L +A+ FV+M S V D T+ V++A
Sbjct: 148 SCLVFNASRRKNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACV 207
Query: 122 MAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVC 181
D G+ VHGF ++ +V D +V +AL+ MY K G + A KVFD+MP R++V
Sbjct: 208 GVYDVRLGEAVHGFALKT-KVLSDVFVGNALIAMYGKFGFVESAVKVFDKMP--QRNLVS 264
Query: 182 WSVLVAGYVQCNKFQDAIRVFWNMLS--DNVVPNEFTLTSVLSACAHSGALDQGKLVHQY 239
W+ ++ ++ F+++ +F +L+ + ++P+ T+ +V+ CA G + G + H
Sbjct: 265 WNSVMYACLENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHG- 323
Query: 240 IECKKVSLNSVELGTALVDM 259
+ K +++ ++L+DM
Sbjct: 324 LALKLGLCGELKVNSSLLDM 343
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 118/236 (50%), Gaps = 5/236 (2%)
Query: 4 KGVEPDQHTFPLLLKMFSKP-VVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGS 62
+G+ PD T ++ + ++ V + + KLG + ++L+ ++ G++
Sbjct: 293 EGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELKVNSSLLDMYSKCGYLCE 352
Query: 63 ACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMR-STGTGVDALTVVSVLRAAA 121
A +FD ++ K++I+W ++I GY K+ A + KM+ V+ +T+++VL
Sbjct: 353 ARVLFD-TNEKNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVCE 411
Query: 122 MAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVC 181
K +HG+ ++ G +Q D V +A + Y KCG A VF M + V
Sbjct: 412 EEIQFLKLKEIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGM--ESKMVSS 469
Query: 182 WSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVH 237
W+ L+ G+VQ + A+ ++ M + P+ FT+ S+LSACA +L GK +H
Sbjct: 470 WNALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEIH 525
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 71/132 (53%), Gaps = 4/132 (3%)
Query: 129 GKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAG 188
G+ +H F + Q D + + L+ MY C D+C VF+ +++ W+ L++G
Sbjct: 112 GRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPYDSCLVFN--ASRRKNLFLWNALLSG 169
Query: 189 YVQCNKFQDAIRVFWNMLS-DNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSL 247
Y++ + F+DA+ VF M+S VP+ FTL V+ AC + G+ VH + KV L
Sbjct: 170 YLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLGEAVHGFALKTKV-L 228
Query: 248 NSVELGTALVDM 259
+ V +G AL+ M
Sbjct: 229 SDVFVGNALIAM 240
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 72/153 (47%), Gaps = 4/153 (2%)
Query: 45 FAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRST 104
F +LI +A G + + +FD +K + W LI GY + +A++ F M++
Sbjct: 639 FVTCSLIDMYAKCGCMEQSQNIFDRVHLKGEVTWNVLITGYGIHGHGRKAIELFKSMQNA 698
Query: 105 GTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDD 164
G D++T +++L A AG G G ++ ++ ++DM + G ++
Sbjct: 699 GFRPDSVTFIALLTACNHAGLVAEGLEYLGQMQSLFGIKPKLEHYACVVDMLGRAGRLNE 758
Query: 165 ACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQD 197
A ++ +E+P D WS L++ C ++D
Sbjct: 759 ALELVNELP-DKPDSRIWSSLLS---SCRNYRD 787
>Medtr7g056073.1 | basic helix loop helix protein, putative | HC |
chr7:19429810-19428206 | 20130731
Length = 534
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/188 (35%), Positives = 105/188 (55%), Gaps = 4/188 (2%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTG 107
NA+I +A G I F E KDII+WT L++ Y+KN E +K F +M + G
Sbjct: 180 NAVIDGYAKLGNIERVEFFFKEIPSKDIISWTTLMSCYLKNKRYGEVVKLFHEMVNEGKV 239
Query: 108 V-DALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDAC 166
V D + + +V+ A A G FGK VH FY+ +D Y+ S+L+DMY KCG + +
Sbjct: 240 VPDEVAITTVISACAHLGALGFGKEVH-FYLMVSGFGIDVYIGSSLIDMYAKCGSLERSL 298
Query: 167 KVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAH 226
VF ++ +++ CW+ ++ G ++A+R+F M + + PN T SVL+AC H
Sbjct: 299 LVFYKL--KEKNLFCWNSMIDGLAAHGYAKEALRMFAEMEREGIRPNRVTFVSVLTACTH 356
Query: 227 SGALDQGK 234
+G + +G+
Sbjct: 357 AGFIQEGR 364
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 133/263 (50%), Gaps = 48/263 (18%)
Query: 1 MRQKGVEPDQHTFPLLLK---MFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANS 57
M + V P ++F L+K + + V + ++ ++K GFD F L+ +++
Sbjct: 69 MLRSSVIPSSYSFSSLIKACTLLTDAV--NGKTLHGHVWKYGFDSHVFVQTTLVEFYSSL 126
Query: 58 GFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVL 117
G++ A +VFDE S +D+ AWT +I+ YV+N+ A FV+M
Sbjct: 127 GYVCDARKVFDEMSARDVYAWTTMISAYVRNNDVESAEILFVEMPE-------------- 172
Query: 118 RAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYR 177
GK + W+A++D Y K G+ + F E+P +
Sbjct: 173 -----------GK--------------NTATWNAVIDGYAKLGNIERVEFFFKEIP--SK 205
Query: 178 DVVCWSVLVAGYVQCNKFQDAIRVFWNMLSD-NVVPNEFTLTSVLSACAHSGALDQGKLV 236
D++ W+ L++ Y++ ++ + +++F M+++ VVP+E +T+V+SACAH GAL GK V
Sbjct: 206 DIISWTTLMSCYLKNKRYGEVVKLFHEMVNEGKVVPDEVAITTVISACAHLGALGFGKEV 265
Query: 237 HQYIECKKVSLNSVELGTALVDM 259
H Y+ ++ V +G++L+DM
Sbjct: 266 HFYLMVSGFGID-VYIGSSLIDM 287
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 70/150 (46%), Gaps = 1/150 (0%)
Query: 39 GFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCF 98
GF +D + G++LI +A G + + VF + K++ W ++I+G + EAL+ F
Sbjct: 273 GFGIDVYIGSSLIDMYAKCGSLERSLLVFYKLKEKNLFCWNSMIDGLAAHGYAKEALRMF 332
Query: 99 VKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFK 158
+M G + +T VSVL A AG G+ ++ + + ++D+ K
Sbjct: 333 AEMEREGIRPNRVTFVSVLTACTHAGFIQEGRRFFTSMIEDYCISPQVEHYGCMVDLLSK 392
Query: 159 CGHCDDACKVFDEMPYSYRDVVCWSVLVAG 188
G +DA ++ M + + W L+ G
Sbjct: 393 GGLLEDALEMIRGMRFEPNSFI-WGALLNG 421
>Medtr2g101710.1 | PPR containing plant protein | HC |
chr2:43758970-43756533 | 20130731
Length = 620
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 132/260 (50%), Gaps = 5/260 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M G+ PD T P +LK S + + I+ + K G++ D F G ALI +A G
Sbjct: 139 MLDYGLRPDNFTLPFVLKACSALSAIGEGRSIHEYVIKSGWERDLFVGAALIDMYAKCGC 198
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ A +VFD+ V+D + W +++ Y +N P E++ +M + G T+V+V+ +
Sbjct: 199 VMDAGRVFDKIVVRDAVLWNSMLAAYAQNGHPDESISLCREMAANGVRPTEATLVTVISS 258
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
+A +G+ +HGF + G Q + V +AL+DMY KCG A +F+ + + V
Sbjct: 259 SADVACLPYGREIHGFGWRHG-FQSNDKVKTALIDMYAKCGSVKVALALFERL--REKRV 315
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQY 239
V W+ ++ GY A+ +F M ++ P+ T VL+AC+ LD+G+ ++
Sbjct: 316 VSWNAIITGYAMHGLAVGALDLFDKMRKED-RPDHITFVGVLAACSRGRLLDEGRALYNL 374
Query: 240 IECKKVSLNSVELGTALVDM 259
+ +V+ T ++D+
Sbjct: 375 MVRDYGITPTVQHYTCMIDL 394
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 118/229 (51%), Gaps = 4/229 (1%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
++AQ + LG ++ L+ +A S + +A +FD+ +++ W LI GY N
Sbjct: 69 LHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNARNLFDKIPKQNLFLWNVLIRGYAWNGP 128
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
A+ + KM G D T+ VL+A + G+ +H + +++G + D +V +
Sbjct: 129 HDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEGRSIHEYVIKSG-WERDLFVGA 187
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV 210
AL+DMY KCG DA +VFD++ RD V W+ ++A Y Q ++I + M ++ V
Sbjct: 188 ALIDMYAKCGCVMDAGRVFDKI--VVRDAVLWNSMLAAYAQNGHPDESISLCREMAANGV 245
Query: 211 VPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
P E TL +V+S+ A L G+ +H + N ++ TAL+DM
Sbjct: 246 RPTEATLVTVISSSADVACLPYGREIHGFGWRHGFQSND-KVKTALIDM 293
>Medtr7g079860.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:30342642-30345393 | 20130731
Length = 755
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 128/250 (51%), Gaps = 20/250 (8%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M G E TF + L + S +VE ++ ++ G + D + ++L+ + G
Sbjct: 257 MVAHGTEFSPVTFSIALILVSSLSLVEVGRQLHGRVLTFGLNSDGYIRSSLVEMYGKCGR 316
Query: 60 IGSACQVFDESSVK----------------DIIAWTALINGYVKNDLPSEALKCFVKMRS 103
+ A + + + +++W+++++GYV N + +K F M
Sbjct: 317 MDKASTILKDVPLNFLRKGNFGVTCKEPKARMVSWSSMVSGYVWNGKYEDGMKTFRSMVC 376
Query: 104 TGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCD 163
VD TV +++ A A AG FGK +H Y+Q +++D YV S+L+DMY K G D
Sbjct: 377 ELIVVDIRTVATIISACANAGILEFGKQIHA-YIQKIGLRIDAYVGSSLIDMYSKSGSLD 435
Query: 164 DACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSA 223
DA +F+++ +VV W+ +++G + ++AI +F ML+ ++PNE T VL+A
Sbjct: 436 DALMIFEQIKEP--NVVLWTSMISGCALHGQGKEAISLFEGMLNLGIIPNEVTFVGVLNA 493
Query: 224 CAHSGALDQG 233
C+H G +++G
Sbjct: 494 CSHVGLIEEG 503
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 130/243 (53%), Gaps = 17/243 (6%)
Query: 32 YAQ-IFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
YA+ F+L + D + N +I A+ G + + ++F KD+++W +I+G ++
Sbjct: 187 YAESFFELMIEKDVVSWNIMIGAYLREGDVEKSLEMFRNFPNKDVVSWNTIIDGLIQCGY 246
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
AL+ M + GT +T L + G+ +HG + G + DGY+ S
Sbjct: 247 ERLALEQLYCMVAHGTEFSPVTFSIALILVSSLSLVEVGRQLHGRVLTFG-LNSDGYIRS 305
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSY--------------RDVVCWSVLVAGYVQCNKFQ 196
+L++MY KCG D A + ++P ++ +V WS +V+GYV K++
Sbjct: 306 SLVEMYGKCGRMDKASTILKDVPLNFLRKGNFGVTCKEPKARMVSWSSMVSGYVWNGKYE 365
Query: 197 DAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTAL 256
D ++ F +M+ + +V + T+ +++SACA++G L+ GK +H YI+ + +++ +G++L
Sbjct: 366 DGMKTFRSMVCELIVVDIRTVATIISACANAGILEFGKQIHAYIQKIGLRIDAY-VGSSL 424
Query: 257 VDM 259
+DM
Sbjct: 425 IDM 427
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 102/203 (50%), Gaps = 4/203 (1%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
++ FK G + N L++ + S + A ++FDE + K+ WT LI+G+ +
Sbjct: 54 LHGHYFKKGSLQILNSANYLLTLYVKSSNLDHAHKLFDEITHKNTQTWTILISGFARAAG 113
Query: 91 PSE-ALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVW 149
SE F +M++ G + T+ SVL+ + + FGK +H + ++ G V D +
Sbjct: 114 SSELVFSLFREMQADGACPNQYTLSSVLKCCSRENNIQFGKGIHAWILRNG-VGGDVVLE 172
Query: 150 SALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDN 209
++++D+Y KC + A F+ M +DVV W++++ Y++ + ++ +F N + +
Sbjct: 173 NSILDLYLKCKEFEYAESFFELMI--EKDVVSWNIMIGAYLREGDVEKSLEMFRNFPNKD 230
Query: 210 VVPNEFTLTSVLSACAHSGALDQ 232
VV + ++ AL+Q
Sbjct: 231 VVSWNTIIDGLIQCGYERLALEQ 253
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 68/127 (53%), Gaps = 4/127 (3%)
Query: 115 SVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPY 174
S L + G + +HG Y + G +Q+ + L+ +Y K + D A K+FDE+
Sbjct: 37 SFLHSTTSIGSPPSLRALHGHYFKKGSLQILNSA-NYLLTLYVKSSNLDHAHKLFDEI-- 93
Query: 175 SYRDVVCWSVLVAGYVQCNKFQDAI-RVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
++++ W++L++G+ + + + +F M +D PN++TL+SVL C+ + G
Sbjct: 94 THKNTQTWTILISGFARAAGSSELVFSLFREMQADGACPNQYTLSSVLKCCSRENNIQFG 153
Query: 234 KLVHQYI 240
K +H +I
Sbjct: 154 KGIHAWI 160
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 71/142 (50%)
Query: 24 VVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALIN 83
++E I+A I K+G +D + G++LI ++ SG + A +F++ +++ WT++I+
Sbjct: 398 ILEFGKQIHAYIQKIGLRIDAYVGSSLIDMYSKSGSLDDALMIFEQIKEPNVVLWTSMIS 457
Query: 84 GYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQ 143
G + EA+ F M + G + +T V VL A + G G +
Sbjct: 458 GCALHGQGKEAISLFEGMLNLGIIPNEVTFVGVLNACSHVGLIEEGCRYFRMMKDTYHIN 517
Query: 144 LDGYVWSALMDMYFKCGHCDDA 165
+ +++++++Y + GH +A
Sbjct: 518 PEVEHYTSMVNLYGRAGHLIEA 539
>Medtr4g015760.4 | PPR containing plant-like protein | HC |
chr4:4765180-4759488 | 20130731
Length = 703
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 114/210 (54%), Gaps = 4/210 (1%)
Query: 25 VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALING 84
+E+ I+ GF+++ AL+ + A +F+ KD+IAW L +G
Sbjct: 326 LEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSG 385
Query: 85 YVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQL 144
Y N + E++ F M S+GT DA+ +V +L + G +H F ++ G +
Sbjct: 386 YADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISELGILQQAVCLHAFVIKNG-FEN 444
Query: 145 DGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWN 204
+ ++ ++L+++Y KC +DA KVF M +Y+DVV WS ++A Y + ++A+++F+
Sbjct: 445 NQFIGASLIEVYAKCSSIEDANKVFKGM--TYKDVVTWSSIIAAYGFHGQGEEALKLFYQ 502
Query: 205 MLS-DNVVPNEFTLTSVLSACAHSGALDQG 233
M + + PN T S+LSAC+HSG + +G
Sbjct: 503 MANHSDTKPNNVTFISILSACSHSGLIKEG 532
Score = 114 bits (286), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 118/229 (51%), Gaps = 4/229 (1%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
++ + + G D N+L+ + +G I +A +F E S KDII+W+ ++ Y N
Sbjct: 231 VHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMVACYADNGA 290
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
++ L F +M + +TVVSVLRA A + G +H V G +++ V +
Sbjct: 291 ETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYG-FEMETTVST 349
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV 210
ALMDMY KC + A +F+ MP +DV+ W+VL +GY +++ VF NMLS
Sbjct: 350 ALMDMYMKCFSPEKAVDLFNRMP--KKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGT 407
Query: 211 VPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
P+ L +L+ + G L Q +H ++ K N+ +G +L+++
Sbjct: 408 RPDAIALVKILTTISELGILQQAVCLHAFV-IKNGFENNQFIGASLIEV 455
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 121/233 (51%), Gaps = 9/233 (3%)
Query: 30 MIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKND 89
+I+ + K+ D D F G+ALI + G + A +VF E D++ WT++I+GY ++
Sbjct: 128 VIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYEQSG 187
Query: 90 LPSEALKCFVKM-RSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGY- 147
P AL F +M S D +T+VSV A A + G+ VHGF + G LD
Sbjct: 188 SPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKG---LDNKL 244
Query: 148 -VWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNML 206
+ ++L+ +Y K G +A +F EM S +D++ WS +VA Y D + +F ML
Sbjct: 245 CLANSLLHLYGKTGSIKNASNLFREM--SDKDIISWSTMVACYADNGAETDVLDLFNEML 302
Query: 207 SDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
+ PN T+ SVL ACA L++G +H+ + + + TAL+DM
Sbjct: 303 DKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYGFEMETT-VSTALMDM 354
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 116/235 (49%), Gaps = 10/235 (4%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
+++Q K G D F L +A I A ++F E+ + + W AL+ Y
Sbjct: 23 LHSQCLKAGLVHDSFIVTKLNVLYARYASIHHAHKLFQETPHRTVYLWNALLRSYCFEGE 82
Query: 91 PSEALKCFVKMRSTGT-----GVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLD 145
E L F +M + + D +V L++ A GK +HGF ++ R+ D
Sbjct: 83 WVETLSLFRQMNNVSSVSIEERPDNYSVSIALKSCAGLRKLLLGKVIHGF-LKKVRIDGD 141
Query: 146 GYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNM 205
+V SAL+D+Y KCG +DA KVF M Y DVV W+ +++GY Q + A+ F M
Sbjct: 142 MFVGSALIDLYTKCGQMNDAVKVF--MEYPKPDVVLWTSIISGYEQSGSPELALAFFSRM 199
Query: 206 -LSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
+S+ V P+ TL SV SACA G+ VH +++ K + N + L +L+ +
Sbjct: 200 VVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLD-NKLCLANSLLHL 253
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 86/175 (49%), Gaps = 2/175 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M G PD +L S+ +++ ++A + K GF+ ++F G +LI +A
Sbjct: 402 MLSSGTRPDAIALVKILTTISELGILQQAVCLHAFVIKNGFENNQFIGASLIEVYAKCSS 461
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKM-RSTGTGVDALTVVSVLR 118
I A +VF + KD++ W+++I Y + EALK F +M + T + +T +S+L
Sbjct: 462 IEDANKVFKGMTYKDVVTWSSIIAAYGFHGQGEEALKLFYQMANHSDTKPNNVTFISILS 521
Query: 119 AAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMP 173
A + +G G + V +++ + ++ ++D+ + G D A V + MP
Sbjct: 522 ACSHSGLIKEGINMFDIMVNKYKLKPNSEHYAIMVDLLGRMGELDMALDVINNMP 576
>Medtr4g015760.1 | PPR containing plant-like protein | HC |
chr4:4766254-4759488 | 20130731
Length = 703
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 114/210 (54%), Gaps = 4/210 (1%)
Query: 25 VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALING 84
+E+ I+ GF+++ AL+ + A +F+ KD+IAW L +G
Sbjct: 326 LEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSG 385
Query: 85 YVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQL 144
Y N + E++ F M S+GT DA+ +V +L + G +H F ++ G +
Sbjct: 386 YADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISELGILQQAVCLHAFVIKNG-FEN 444
Query: 145 DGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWN 204
+ ++ ++L+++Y KC +DA KVF M +Y+DVV WS ++A Y + ++A+++F+
Sbjct: 445 NQFIGASLIEVYAKCSSIEDANKVFKGM--TYKDVVTWSSIIAAYGFHGQGEEALKLFYQ 502
Query: 205 MLS-DNVVPNEFTLTSVLSACAHSGALDQG 233
M + + PN T S+LSAC+HSG + +G
Sbjct: 503 MANHSDTKPNNVTFISILSACSHSGLIKEG 532
Score = 114 bits (286), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 118/229 (51%), Gaps = 4/229 (1%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
++ + + G D N+L+ + +G I +A +F E S KDII+W+ ++ Y N
Sbjct: 231 VHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMVACYADNGA 290
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
++ L F +M + +TVVSVLRA A + G +H V G +++ V +
Sbjct: 291 ETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYG-FEMETTVST 349
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV 210
ALMDMY KC + A +F+ MP +DV+ W+VL +GY +++ VF NMLS
Sbjct: 350 ALMDMYMKCFSPEKAVDLFNRMP--KKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGT 407
Query: 211 VPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
P+ L +L+ + G L Q +H ++ K N+ +G +L+++
Sbjct: 408 RPDAIALVKILTTISELGILQQAVCLHAFV-IKNGFENNQFIGASLIEV 455
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 121/233 (51%), Gaps = 9/233 (3%)
Query: 30 MIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKND 89
+I+ + K+ D D F G+ALI + G + A +VF E D++ WT++I+GY ++
Sbjct: 128 VIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYEQSG 187
Query: 90 LPSEALKCFVKM-RSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGY- 147
P AL F +M S D +T+VSV A A + G+ VHGF + G LD
Sbjct: 188 SPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKG---LDNKL 244
Query: 148 -VWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNML 206
+ ++L+ +Y K G +A +F EM S +D++ WS +VA Y D + +F ML
Sbjct: 245 CLANSLLHLYGKTGSIKNASNLFREM--SDKDIISWSTMVACYADNGAETDVLDLFNEML 302
Query: 207 SDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
+ PN T+ SVL ACA L++G +H+ + + + TAL+DM
Sbjct: 303 DKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYGFEMETT-VSTALMDM 354
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 116/235 (49%), Gaps = 10/235 (4%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
+++Q K G D F L +A I A ++F E+ + + W AL+ Y
Sbjct: 23 LHSQCLKAGLVHDSFIVTKLNVLYARYASIHHAHKLFQETPHRTVYLWNALLRSYCFEGE 82
Query: 91 PSEALKCFVKMRSTGT-----GVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLD 145
E L F +M + + D +V L++ A GK +HGF ++ R+ D
Sbjct: 83 WVETLSLFRQMNNVSSVSIEERPDNYSVSIALKSCAGLRKLLLGKVIHGF-LKKVRIDGD 141
Query: 146 GYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNM 205
+V SAL+D+Y KCG +DA KVF M Y DVV W+ +++GY Q + A+ F M
Sbjct: 142 MFVGSALIDLYTKCGQMNDAVKVF--MEYPKPDVVLWTSIISGYEQSGSPELALAFFSRM 199
Query: 206 -LSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
+S+ V P+ TL SV SACA G+ VH +++ K + N + L +L+ +
Sbjct: 200 VVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLD-NKLCLANSLLHL 253
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 86/175 (49%), Gaps = 2/175 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M G PD +L S+ +++ ++A + K GF+ ++F G +LI +A
Sbjct: 402 MLSSGTRPDAIALVKILTTISELGILQQAVCLHAFVIKNGFENNQFIGASLIEVYAKCSS 461
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKM-RSTGTGVDALTVVSVLR 118
I A +VF + KD++ W+++I Y + EALK F +M + T + +T +S+L
Sbjct: 462 IEDANKVFKGMTYKDVVTWSSIIAAYGFHGQGEEALKLFYQMANHSDTKPNNVTFISILS 521
Query: 119 AAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMP 173
A + +G G + V +++ + ++ ++D+ + G D A V + MP
Sbjct: 522 ACSHSGLIKEGINMFDIMVNKYKLKPNSEHYAIMVDLLGRMGELDMALDVINNMP 576
>Medtr4g015760.2 | PPR containing plant-like protein | HC |
chr4:4766254-4759488 | 20130731
Length = 673
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 114/210 (54%), Gaps = 4/210 (1%)
Query: 25 VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALING 84
+E+ I+ GF+++ AL+ + A +F+ KD+IAW L +G
Sbjct: 296 LEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSG 355
Query: 85 YVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQL 144
Y N + E++ F M S+GT DA+ +V +L + G +H F ++ G +
Sbjct: 356 YADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISELGILQQAVCLHAFVIKNG-FEN 414
Query: 145 DGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWN 204
+ ++ ++L+++Y KC +DA KVF M +Y+DVV WS ++A Y + ++A+++F+
Sbjct: 415 NQFIGASLIEVYAKCSSIEDANKVFKGM--TYKDVVTWSSIIAAYGFHGQGEEALKLFYQ 472
Query: 205 MLS-DNVVPNEFTLTSVLSACAHSGALDQG 233
M + + PN T S+LSAC+HSG + +G
Sbjct: 473 MANHSDTKPNNVTFISILSACSHSGLIKEG 502
Score = 114 bits (286), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 118/229 (51%), Gaps = 4/229 (1%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
++ + + G D N+L+ + +G I +A +F E S KDII+W+ ++ Y N
Sbjct: 201 VHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMVACYADNGA 260
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
++ L F +M + +TVVSVLRA A + G +H V G +++ V +
Sbjct: 261 ETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYG-FEMETTVST 319
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV 210
ALMDMY KC + A +F+ MP +DV+ W+VL +GY +++ VF NMLS
Sbjct: 320 ALMDMYMKCFSPEKAVDLFNRMP--KKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGT 377
Query: 211 VPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
P+ L +L+ + G L Q +H ++ K N+ +G +L+++
Sbjct: 378 RPDAIALVKILTTISELGILQQAVCLHAFV-IKNGFENNQFIGASLIEV 425
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 121/233 (51%), Gaps = 9/233 (3%)
Query: 30 MIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKND 89
+I+ + K+ D D F G+ALI + G + A +VF E D++ WT++I+GY ++
Sbjct: 98 VIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYEQSG 157
Query: 90 LPSEALKCFVKM-RSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGY- 147
P AL F +M S D +T+VSV A A + G+ VHGF + G LD
Sbjct: 158 SPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKG---LDNKL 214
Query: 148 -VWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNML 206
+ ++L+ +Y K G +A +F EM S +D++ WS +VA Y D + +F ML
Sbjct: 215 CLANSLLHLYGKTGSIKNASNLFREM--SDKDIISWSTMVACYADNGAETDVLDLFNEML 272
Query: 207 SDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
+ PN T+ SVL ACA L++G +H+ + + + TAL+DM
Sbjct: 273 DKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYGFEMETT-VSTALMDM 324
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 105/206 (50%), Gaps = 10/206 (4%)
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGT-----GVDALTVV 114
I A ++F E+ + + W AL+ Y E L F +M + + D +V
Sbjct: 22 IHHAHKLFQETPHRTVYLWNALLRSYCFEGEWVETLSLFRQMNNVSSVSIEERPDNYSVS 81
Query: 115 SVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPY 174
L++ A GK +HGF ++ R+ D +V SAL+D+Y KCG +DA KVF M Y
Sbjct: 82 IALKSCAGLRKLLLGKVIHGF-LKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVF--MEY 138
Query: 175 SYRDVVCWSVLVAGYVQCNKFQDAIRVFWNM-LSDNVVPNEFTLTSVLSACAHSGALDQG 233
DVV W+ +++GY Q + A+ F M +S+ V P+ TL SV SACA G
Sbjct: 139 PKPDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLG 198
Query: 234 KLVHQYIECKKVSLNSVELGTALVDM 259
+ VH +++ K + N + L +L+ +
Sbjct: 199 RSVHGFVKRKGLD-NKLCLANSLLHL 223
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 86/175 (49%), Gaps = 2/175 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M G PD +L S+ +++ ++A + K GF+ ++F G +LI +A
Sbjct: 372 MLSSGTRPDAIALVKILTTISELGILQQAVCLHAFVIKNGFENNQFIGASLIEVYAKCSS 431
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKM-RSTGTGVDALTVVSVLR 118
I A +VF + KD++ W+++I Y + EALK F +M + T + +T +S+L
Sbjct: 432 IEDANKVFKGMTYKDVVTWSSIIAAYGFHGQGEEALKLFYQMANHSDTKPNNVTFISILS 491
Query: 119 AAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMP 173
A + +G G + V +++ + ++ ++D+ + G D A V + MP
Sbjct: 492 ACSHSGLIKEGINMFDIMVNKYKLKPNSEHYAIMVDLLGRMGELDMALDVINNMP 546
>Medtr4g015760.3 | PPR containing plant-like protein | HC |
chr4:4765180-4759488 | 20130731
Length = 673
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 114/210 (54%), Gaps = 4/210 (1%)
Query: 25 VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALING 84
+E+ I+ GF+++ AL+ + A +F+ KD+IAW L +G
Sbjct: 296 LEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSG 355
Query: 85 YVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQL 144
Y N + E++ F M S+GT DA+ +V +L + G +H F ++ G +
Sbjct: 356 YADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISELGILQQAVCLHAFVIKNG-FEN 414
Query: 145 DGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWN 204
+ ++ ++L+++Y KC +DA KVF M +Y+DVV WS ++A Y + ++A+++F+
Sbjct: 415 NQFIGASLIEVYAKCSSIEDANKVFKGM--TYKDVVTWSSIIAAYGFHGQGEEALKLFYQ 472
Query: 205 MLS-DNVVPNEFTLTSVLSACAHSGALDQG 233
M + + PN T S+LSAC+HSG + +G
Sbjct: 473 MANHSDTKPNNVTFISILSACSHSGLIKEG 502
Score = 114 bits (286), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 118/229 (51%), Gaps = 4/229 (1%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
++ + + G D N+L+ + +G I +A +F E S KDII+W+ ++ Y N
Sbjct: 201 VHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMVACYADNGA 260
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
++ L F +M + +TVVSVLRA A + G +H V G +++ V +
Sbjct: 261 ETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYG-FEMETTVST 319
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV 210
ALMDMY KC + A +F+ MP +DV+ W+VL +GY +++ VF NMLS
Sbjct: 320 ALMDMYMKCFSPEKAVDLFNRMP--KKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGT 377
Query: 211 VPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
P+ L +L+ + G L Q +H ++ K N+ +G +L+++
Sbjct: 378 RPDAIALVKILTTISELGILQQAVCLHAFV-IKNGFENNQFIGASLIEV 425
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 121/233 (51%), Gaps = 9/233 (3%)
Query: 30 MIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKND 89
+I+ + K+ D D F G+ALI + G + A +VF E D++ WT++I+GY ++
Sbjct: 98 VIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYEQSG 157
Query: 90 LPSEALKCFVKM-RSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGY- 147
P AL F +M S D +T+VSV A A + G+ VHGF + G LD
Sbjct: 158 SPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKG---LDNKL 214
Query: 148 -VWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNML 206
+ ++L+ +Y K G +A +F EM S +D++ WS +VA Y D + +F ML
Sbjct: 215 CLANSLLHLYGKTGSIKNASNLFREM--SDKDIISWSTMVACYADNGAETDVLDLFNEML 272
Query: 207 SDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
+ PN T+ SVL ACA L++G +H+ + + + TAL+DM
Sbjct: 273 DKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYGFEMETT-VSTALMDM 324
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 105/206 (50%), Gaps = 10/206 (4%)
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGT-----GVDALTVV 114
I A ++F E+ + + W AL+ Y E L F +M + + D +V
Sbjct: 22 IHHAHKLFQETPHRTVYLWNALLRSYCFEGEWVETLSLFRQMNNVSSVSIEERPDNYSVS 81
Query: 115 SVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPY 174
L++ A GK +HGF ++ R+ D +V SAL+D+Y KCG +DA KVF M Y
Sbjct: 82 IALKSCAGLRKLLLGKVIHGF-LKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVF--MEY 138
Query: 175 SYRDVVCWSVLVAGYVQCNKFQDAIRVFWNM-LSDNVVPNEFTLTSVLSACAHSGALDQG 233
DVV W+ +++GY Q + A+ F M +S+ V P+ TL SV SACA G
Sbjct: 139 PKPDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLG 198
Query: 234 KLVHQYIECKKVSLNSVELGTALVDM 259
+ VH +++ K + N + L +L+ +
Sbjct: 199 RSVHGFVKRKGLD-NKLCLANSLLHL 223
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 86/175 (49%), Gaps = 2/175 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M G PD +L S+ +++ ++A + K GF+ ++F G +LI +A
Sbjct: 372 MLSSGTRPDAIALVKILTTISELGILQQAVCLHAFVIKNGFENNQFIGASLIEVYAKCSS 431
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKM-RSTGTGVDALTVVSVLR 118
I A +VF + KD++ W+++I Y + EALK F +M + T + +T +S+L
Sbjct: 432 IEDANKVFKGMTYKDVVTWSSIIAAYGFHGQGEEALKLFYQMANHSDTKPNNVTFISILS 491
Query: 119 AAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMP 173
A + +G G + V +++ + ++ ++D+ + G D A V + MP
Sbjct: 492 ACSHSGLIKEGINMFDIMVNKYKLKPNSEHYAIMVDLLGRMGELDMALDVINNMP 546
>Medtr3g063220.1 | PPR containing plant-like protein | HC |
chr3:28610294-28607607 | 20130731
Length = 546
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 136/251 (54%), Gaps = 11/251 (4%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M ++GVEPD TFP +LK+ +V ++ + + GF D F NAL+ ++ G
Sbjct: 205 MVEEGVEPDIFTFPRVLKVCGGIGLVGVGEEVHRHVVRCGFWDDGFVLNALVDMYSKCGD 264
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
I A ++F++ +D ++W +++ GYV++ L EA+ F +M G D ++ ++L +
Sbjct: 265 IVKARKIFNKMHFRDSVSWNSMLTGYVRHGLEVEAINIFRQMVLKGEKPDYFSISAILTS 324
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
+ + G +HG+ ++ G V+ + + ++L+ Y K G D A +F+ MP RDV
Sbjct: 325 VSSL---DVGVQIHGWVIRQG-VEWNLSIANSLIIAYSKHGRLDKARSIFNLMP--ERDV 378
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQY 239
V W+ +++ + K +AI F M VP++ T S+LSACAH G ++ G+ +
Sbjct: 379 VSWNSIISSHC---KHPEAISYFEKMEEAGEVPDKITFVSLLSACAHLGLVNDGERLFAL 435
Query: 240 IECKKVSLNSV 250
+ C+K + +
Sbjct: 436 M-CEKYKIKPI 445
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 111/203 (54%), Gaps = 8/203 (3%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIA--WTALINGYVKNDLPSEALKCFVKMRSTG 105
+ L+ +A+ G++ A +FD+ + +D+ A W +LI+GY + L +A+ + +M G
Sbjct: 150 SKLVRLYASFGYMDDAHDLFDQMTKRDMYAFPWNSLISGYAEMGLYDDAIALYFQMVEEG 209
Query: 106 TGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDA 165
D T VL+ G G+ VH V+ G DG+V +AL+DMY KCG A
Sbjct: 210 VEPDIFTFPRVLKVCGGIGLVGVGEEVHRHVVRCGFWD-DGFVLNALVDMYSKCGDIVKA 268
Query: 166 CKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACA 225
K+F++M +RD V W+ ++ GYV+ +AI +F M+ P+ F+++++L++ +
Sbjct: 269 RKIFNKM--HFRDSVSWNSMLTGYVRHGLEVEAINIFRQMVLKGEKPDYFSISAILTSVS 326
Query: 226 HSGALDQGKLVHQYIECKKVSLN 248
+LD G +H ++ + V N
Sbjct: 327 ---SLDVGVQIHGWVIRQGVEWN 346
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 70/138 (50%), Gaps = 5/138 (3%)
Query: 105 GTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDD 164
G +D S+L G + G W+H + + + + S L+ +Y G+ DD
Sbjct: 106 GIKIDPEIYASLLETCYRFGAIHHGIWLHRL-IPPALLHRNVGISSKLVRLYASFGYMDD 164
Query: 165 ACKVFDEMPYSYRDVVC--WSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLS 222
A +FD+M + RD+ W+ L++GY + + DAI +++ M+ + V P+ FT VL
Sbjct: 165 AHDLFDQM--TKRDMYAFPWNSLISGYAEMGLYDDAIALYFQMVEEGVEPDIFTFPRVLK 222
Query: 223 ACAHSGALDQGKLVHQYI 240
C G + G+ VH+++
Sbjct: 223 VCGGIGLVGVGEEVHRHV 240
>Medtr5g088310.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:38310385-38313323 | 20130731
Length = 684
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 133/262 (50%), Gaps = 9/262 (3%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPF---MIYAQIFKLGFDLDRFAGNALISAFANS 57
MR+ V+P+ TFP + K + V+ P I+ K G D F G + + +
Sbjct: 99 MRRDNVQPNDFTFPCVFK--ASAFVQIPMTGKQIHGLALKGGMIYDVFVGCSCFDMYCKT 156
Query: 58 GFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVL 117
GF G AC +FDE +++ W A I+ V++ +A+ F + +++T + L
Sbjct: 157 GFRGDACNMFDEMPQRNLATWNAYISNAVQDRRSLDAIVAFKEFLCVHGEPNSITFCAFL 216
Query: 118 RAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYR 177
A N G+ +H F V+ G + D V + L+D Y KCG A VF+ + + +
Sbjct: 217 NACVDMVRLNLGRQLHAFIVRCGYKE-DVSVANGLIDFYGKCGDIVSAEMVFNRIG-NRK 274
Query: 178 DVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVH 237
+VV W ++A VQ ++ + A VF + V P +F ++SVLSACA G L+ G+ VH
Sbjct: 275 NVVSWCSMLAALVQNHEEERACMVFLQARKE-VEPTDFMISSVLSACAELGGLELGRSVH 333
Query: 238 QYIECKKVSLNSVELGTALVDM 259
+ K +++ +G+ALVDM
Sbjct: 334 A-LAVKACVEDNIFVGSALVDM 354
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 110/206 (53%), Gaps = 7/206 (3%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDE-SSVKDIIAWTALINGYVKND 89
++A I + G+ D N LI + G I SA VF+ + K++++W +++ V+N
Sbjct: 231 LHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSAEMVFNRIGNRKNVVSWCSMLAALVQNH 290
Query: 90 LPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVW 149
A F++ R D + SVL A A G G+ VH V+A V+ + +V
Sbjct: 291 EEERACMVFLQARKEVEPTD-FMISSVLSACAELGGLELGRSVHALAVKAC-VEDNIFVG 348
Query: 150 SALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNML--S 207
SAL+DMY KCG ++A +VF E+P R++V W+ ++ GY A+R+F M S
Sbjct: 349 SALVDMYGKCGSIENAEQVFSELP--ERNLVTWNAMIGGYAHQGDIDMALRLFEEMTLGS 406
Query: 208 DNVVPNEFTLTSVLSACAHSGALDQG 233
+ P+ TL S+LS C+ GA+++G
Sbjct: 407 HGIRPSYVTLISILSVCSRVGAVERG 432
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 102/211 (48%), Gaps = 4/211 (1%)
Query: 31 IYAQIFKLGFD-LDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKND 89
I+A I + L F N L++ ++ + SA V + ++ ++ WT+LI+G V N
Sbjct: 28 IHAHIIRTHVTPLPSFLSNHLVNMYSKLDLLNSAQHVLSLTHLRTVVTWTSLISGCVHNR 87
Query: 90 LPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVW 149
AL F MR + T V +A+A GK +HG ++ G + D +V
Sbjct: 88 RFLPALLHFTNMRRDNVQPNDFTFPCVFKASAFVQIPMTGKQIHGLALKGGMI-YDVFVG 146
Query: 150 SALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDN 209
+ DMY K G DAC +FDEMP R++ W+ ++ VQ + DAI F L +
Sbjct: 147 CSCFDMYCKTGFRGDACNMFDEMP--QRNLATWNAYISNAVQDRRSLDAIVAFKEFLCVH 204
Query: 210 VVPNEFTLTSVLSACAHSGALDQGKLVHQYI 240
PN T + L+AC L+ G+ +H +I
Sbjct: 205 GEPNSITFCAFLNACVDMVRLNLGRQLHAFI 235
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 56/123 (45%), Gaps = 2/123 (1%)
Query: 115 SVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPY 174
S+L +A G+ +H ++ L ++ + L++MY K + A V
Sbjct: 11 SLLESAVSTHCSILGRTIHAHIIRTHVTPLPSFLSNHLVNMYSKLDLLNSAQHVLS--LT 68
Query: 175 SYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGK 234
R VV W+ L++G V +F A+ F NM DNV PN+FT V A A GK
Sbjct: 69 HLRTVVTWTSLISGCVHNRRFLPALLHFTNMRRDNVQPNDFTFPCVFKASAFVQIPMTGK 128
Query: 235 LVH 237
+H
Sbjct: 129 QIH 131
>Medtr3g434800.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:11323375-11320804 | 20130731
Length = 724
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 129/244 (52%), Gaps = 18/244 (7%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVED---PFMIYAQIFKLGFDLDRFAGNALISAFANS 57
M + G+E D T +L F+ ++D + ++ K GF + G+ LI ++
Sbjct: 234 MERMGLEVDMFTMASVLTAFT--CLKDLAGGMQFHGKMIKSGFHRNSHVGSGLIDLYSKC 291
Query: 58 GFIG--SACQVFDESSVKDIIAWTALINGYVKN-DLPSEALKCFVKMRSTGTGVDALTVV 114
G +VF+E D++ W +I+G+ ++ DL +AL F +M+ G D + V
Sbjct: 292 APHGMLECMKVFEEIPKPDLVLWNTMISGFSQHEDLCEDALSSFREMQRVGFCPDDCSFV 351
Query: 115 SVLRAAAMAGDDNFGKWVHGFYVQA----GRVQLDGYVWSALMDMYFKCGHCDDACKVFD 170
V+ A + + GK VH +++ RV ++ +A + MY KCG+ DA ++FD
Sbjct: 352 CVISACSNLSSPSVGKQVHALAIKSDIPCNRVSVN----NAFVAMYSKCGNLHDARRIFD 407
Query: 171 EMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGAL 230
MP ++ V + ++AGY Q +++++F ML + +VPN T SVLSACAH+G +
Sbjct: 408 TMPE--QNTVSLNSMIAGYAQHGAEIESLQLFELMLQEKIVPNNITFISVLSACAHTGKV 465
Query: 231 DQGK 234
D+G+
Sbjct: 466 DEGE 469
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 113/221 (51%), Gaps = 13/221 (5%)
Query: 39 GFDLDRFAGNALISAFANSGFIGSACQVFDE--SSVKDIIAWTALINGYVKNDLPSEALK 96
G+D NA+++ + G + A +VF E +D+++W A+I ++ ++AL+
Sbjct: 170 GYDCYASVCNAVLACYGRLGRLNEAWRVFREMGEGCRDMVSWNAMIVACGQHREGAKALR 229
Query: 97 CFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMY 156
F +M G VD T+ SVL A D G HG +++G + +V S L+D+Y
Sbjct: 230 LFGEMERMGLEVDMFTMASVLTAFTCLKDLAGGMQFHGKMIKSG-FHRNSHVGSGLIDLY 288
Query: 157 FKCG-HCDDAC-KVFDEMPYSYRDVVCWSVLVAGYVQCNKF-QDAIRVFWNMLSDNVVPN 213
KC H C KVF+E+P D+V W+ +++G+ Q +DA+ F M P+
Sbjct: 289 SKCAPHGMLECMKVFEEIPKP--DLVLWNTMISGFSQHEDLCEDALSSFREMQRVGFCPD 346
Query: 214 EFTLTSVLSACAHSGALDQGKLVHQY-----IECKKVSLNS 249
+ + V+SAC++ + GK VH I C +VS+N+
Sbjct: 347 DCSFVCVISACSNLSSPSVGKQVHALAIKSDIPCNRVSVNN 387
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 102/217 (47%), Gaps = 8/217 (3%)
Query: 45 FAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRST 104
F+ N +I A A A Q+FDE D++++ LI + + +A+ F ++R
Sbjct: 77 FSYNTIIHACAKHNLPNLAHQLFDEIPEPDVVSYNTLIAVHARRGECGQAVSVFKEVREV 136
Query: 105 GTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGY--VWSALMDMYFKCGHC 162
G +D T+ V+ A+ D + +H F + G D Y V +A++ Y + G
Sbjct: 137 GLVLDGFTLSGVISASV--EDVGLVRQLHCFALLCG---YDCYASVCNAVLACYGRLGRL 191
Query: 163 DDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLS 222
++A +VF EM RD+V W+ ++ Q + A+R+F M + + FT+ SVL+
Sbjct: 192 NEAWRVFREMGEGCRDMVSWNAMIVACGQHREGAKALRLFGEMERMGLEVDMFTMASVLT 251
Query: 223 ACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
A L G H + NS +G+ L+D+
Sbjct: 252 AFTCLKDLAGGMQFHGKMIKSGFHRNS-HVGSGLIDL 287
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/219 (20%), Positives = 97/219 (44%), Gaps = 10/219 (4%)
Query: 1 MRQKGVEPDQHTFPLLLKM---FSKPVVEDPFMIYAQIFKLGFDLDRFA-GNALISAFAN 56
M++ G PD +F ++ S P V ++A K +R + NA ++ ++
Sbjct: 338 MQRVGFCPDDCSFVCVISACSNLSSPSVGK--QVHALAIKSDIPCNRVSVNNAFVAMYSK 395
Query: 57 SGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSV 116
G + A ++FD ++ ++ ++I GY ++ E+L+ F M + +T +SV
Sbjct: 396 CGNLHDARRIFDTMPEQNTVSLNSMIAGYAQHGAEIESLQLFELMLQEKIVPNNITFISV 455
Query: 117 LRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSY 176
L A A G + G+ + ++ + +S ++D+ + G + A ++ + MP+
Sbjct: 456 LSACAHTGKVDEGEKYFNMMKEKFGIEPEAEHYSCMIDLLGRAGKLNKAERIIETMPFDP 515
Query: 177 RDVVCWSVLVAGYVQCNKFQDAIRV---FWNMLSDNVVP 212
+ W+ L+ + + A++ F + N P
Sbjct: 516 GSIE-WAALLGACKKHGNVELAVKAANKFLQLEPYNAAP 553
>Medtr8g106950.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:45164389-45168068 | 20130731
Length = 766
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 102/186 (54%), Gaps = 3/186 (1%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTG 107
N +I+ + G I A + FD +D ++W A+I GY ++ EAL FV+++ G
Sbjct: 332 NTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGES 391
Query: 108 VDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACK 167
++ T L A GK +HG V+ G +V +AL+ MYFKCG D+A
Sbjct: 392 LNRATFGCALSTCADIAALELGKQIHGQAVKMG-YGTGCFVGNALLAMYFKCGSIDEAND 450
Query: 168 VFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHS 227
F+ + +DVV W+ ++AGY + + A+ VF +M + V P+E T+ VLSAC+H+
Sbjct: 451 TFEGI--EEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHT 508
Query: 228 GALDQG 233
G LD+G
Sbjct: 509 GLLDRG 514
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 95/206 (46%), Gaps = 33/206 (16%)
Query: 43 DRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMR 102
D + N +IS +A G + A ++FDES +D+ WTA+++GYV+N + EA F +M
Sbjct: 234 DAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMP 293
Query: 103 STGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYV-----------WSA 151
V A +AG YVQ ++ + + W+
Sbjct: 294 EKN---------EVSYNAMIAG-----------YVQTKKMDIARELFESMPCRNISSWNT 333
Query: 152 LMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVV 211
++ Y + G A K FD MP RD V W+ ++AGY Q +++A+ +F + D
Sbjct: 334 MITGYGQIGDIAQARKFFDMMPQ--RDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGES 391
Query: 212 PNEFTLTSVLSACAHSGALDQGKLVH 237
N T LS CA AL+ GK +H
Sbjct: 392 LNRATFGCALSTCADIAALELGKQIH 417
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 111/247 (44%), Gaps = 38/247 (15%)
Query: 19 MFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAW 78
M S + F + +F + D F+ N +++ + + +G A ++FD KD+++W
Sbjct: 86 MISGYLRNSKFNLARNLFDQMPERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSW 145
Query: 79 TALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQ 138
+L++GY +N EA + F M ++++ +L A YV
Sbjct: 146 NSLLSGYAQNGYVDEAREVFDNMPEK----NSISWNGLLAA----------------YVH 185
Query: 139 AGRVQ-----------LDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVA 187
GR++ D W+ LM + + DA +FD+MP RD + W+ +++
Sbjct: 186 NGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMP--VRDAISWNTMIS 243
Query: 188 GYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGK-LVHQYIECKKVS 246
GY Q A R+F ++ + FT T+++S +G LD+ K + E +VS
Sbjct: 244 GYAQGGGLSQARRLF----DESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEVS 299
Query: 247 LNSVELG 253
N++ G
Sbjct: 300 YNAMIAG 306
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 83/168 (49%), Gaps = 21/168 (12%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTG 107
N L++A+ ++G I AC +F+ S D+I+W L+ G+V+ +A F KM
Sbjct: 177 NGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVR--- 233
Query: 108 VDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRV-----QLDGYVWSALMDMYFKCGHC 162
DA++ +++ A G QA R+ D + W+A++ Y + G
Sbjct: 234 -DAISWNTMISGYAQGGG----------LSQARRLFDESPTRDVFTWTAMVSGYVQNGML 282
Query: 163 DDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV 210
D+A FDEMP ++ V ++ ++AGYVQ K A +F +M N+
Sbjct: 283 DEAKTFFDEMPE--KNEVSYNAMIAGYVQTKKMDIARELFESMPCRNI 328
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 84/176 (47%), Gaps = 3/176 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
++Q G ++ TF L + +E I+ Q K+G+ F GNAL++ + G
Sbjct: 385 IKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGS 444
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
I A F+ KD+++W ++ GY ++ +AL F M++ G D +T+V VL A
Sbjct: 445 IDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSA 504
Query: 120 AAMAG-DDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPY 174
+ G D ++ + G + + ++ ++D+ + G ++A + MP+
Sbjct: 505 CSHTGLLDRGTEYFYSMTKDYGVIPTSKH-YTCMIDLLGRAGRLEEAQDLIRNMPF 559
>Medtr2g035620.1 | PPR containing plant protein | HC |
chr2:15068017-15065354 | 20130731
Length = 887
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 134/263 (50%), Gaps = 10/263 (3%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPFM---IYAQIFKLGFDLDRFAGNALISAFANS 57
M GV PD FP +LK + ++D + ++A +FK G L N+ ++ +
Sbjct: 76 MVTAGVPPDNFAFPAVLKATAG--IQDLNLGKQLHAHVFKFGQALPTAVPNSFVNMYGKC 133
Query: 58 GFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVL 117
G I +A +VFDE + +D ++W ++IN + + A+ F M G + T+VSV
Sbjct: 134 GDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELAVHLFRLMLLENVGPTSFTLVSVA 193
Query: 118 RAAA-MAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSY 176
A + + GK VH F ++ G + + +AL+ MY K G +A +FD +
Sbjct: 194 HACSNLINGLLLGKQVHAFVLRNGDWRT--FTNNALVTMYAKLGRVYEAKTLFD--VFDD 249
Query: 177 RDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLV 236
+D+V W+ +++ Q ++F++A+ ML V PN TL SVL AC+H L GK +
Sbjct: 250 KDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPACSHLEMLGCGKEI 309
Query: 237 HQYIECKKVSLNSVELGTALVDM 259
H ++ + + +G ALVDM
Sbjct: 310 HAFVLMNNDLIENSFVGCALVDM 332
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/236 (32%), Positives = 117/236 (49%), Gaps = 23/236 (9%)
Query: 43 DRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMR 102
+ F G AL+ + N VFD + I W A+I GYV+N+ EA++ FV+M
Sbjct: 322 NSFVGCALVDMYCNCKQPEKGRLVFDGMFRRTIAVWNAMIAGYVRNEFDYEAIELFVEMV 381
Query: 103 -STGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGH 161
G +++T+ SVL A + +H V+ G + D YV +ALMDMY + G
Sbjct: 382 FELGLSPNSVTLSSVLPACVRCESFLDKEGIHSCVVKWG-FEKDKYVQNALMDMYSRMGR 440
Query: 162 CDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNM--------------LS 207
+ A +F M + +D+V W+ ++ GYV C + DA+ + +M
Sbjct: 441 IEIARSIFGSM--NRKDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQAEHRINTFDDYE 498
Query: 208 DN----VVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
DN + PN TL +VL CA AL +GK +H Y K++ V +G+ALVDM
Sbjct: 499 DNKNFPLKPNSVTLMTVLPGCAALAALGKGKEIHAY-AVKQMLSKDVAVGSALVDM 553
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 116/226 (51%), Gaps = 26/226 (11%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
I++ + K GF+ D++ NAL+ ++ G I A +F + KDI++W +I GYV
Sbjct: 412 IHSCVVKWGFEKDKYVQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTMITGYVVCGR 471
Query: 91 PSEALKCFVKM------------------RSTGTGVDALTVVSVLRAAAMAGDDNFGKWV 132
+AL M ++ +++T+++VL A GK +
Sbjct: 472 HDDALNLLHDMQRGQAEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAALAALGKGKEI 531
Query: 133 HGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQC 192
H + V+ + D V SAL+DMY KCG + + VF++M S R+V+ W+VL+ Y
Sbjct: 532 HAYAVKQ-MLSKDVAVGSALVDMYAKCGCLNLSRTVFEQM--SVRNVITWNVLIMAYGMH 588
Query: 193 NKFQDAIRVFWNMLSD-----NVVPNEFTLTSVLSACAHSGALDQG 233
K ++A+++F M+ + + PNE T ++ ++ +HSG +D+G
Sbjct: 589 GKGEEALKLFRRMVEEGDNNREIRPNEVTYIAIFASLSHSGMVDEG 634
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 103/196 (52%), Gaps = 6/196 (3%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
++A + + G D F NAL++ +A G + A +FD KD+++W +I+ +ND
Sbjct: 209 VHAFVLRNG-DWRTFTNNALVTMYAKLGRVYEAKTLFDVFDDKDLVSWNTIISSLSQNDR 267
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
EAL M +G + +T+ SVL A + GK +H F + + + +V
Sbjct: 268 FEEALLYLHVMLQSGVRPNGVTLASVLPACSHLEMLGCGKEIHAFVLMNNDLIENSFVGC 327
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQ-DAIRVFWNMLSD- 208
AL+DMY C + VFD M R + W+ ++AGYV+ N+F +AI +F M+ +
Sbjct: 328 ALVDMYCNCKQPEKGRLVFDGM--FRRTIAVWNAMIAGYVR-NEFDYEAIELFVEMVFEL 384
Query: 209 NVVPNEFTLTSVLSAC 224
+ PN TL+SVL AC
Sbjct: 385 GLSPNSVTLSSVLPAC 400
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 71/163 (43%), Gaps = 5/163 (3%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
I+A K D G+AL+ +A G + + VF++ SV+++I W LI Y +
Sbjct: 531 IHAYAVKQMLSKDVAVGSALVDMYAKCGCLNLSRTVFEQMSVRNVITWNVLIMAYGMHGK 590
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHG---FYVQAGR--VQLD 145
EALK F +M G + V A A + G G FY + ++
Sbjct: 591 GEEALKLFRRMVEEGDNNREIRPNEVTYIAIFASLSHSGMVDEGLNLFYTMKAKHGIEPT 650
Query: 146 GYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAG 188
++ L+D+ + G ++A + MP + + V WS L+
Sbjct: 651 SDHYACLVDLLGRSGQIEEAYNLIKTMPSNMKKVDAWSSLLGA 693
>Medtr7g082690.1 | PPR containing plant-like protein | HC |
chr7:31706993-31708834 | 20130731
Length = 503
Score = 114 bits (285), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 118/234 (50%), Gaps = 4/234 (1%)
Query: 1 MRQKGVEPDQHTF-PLLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M ++GV+PD+ TF L + + ++ ++AQ+ + G+ D GN+L+ + +
Sbjct: 150 MNREGVKPDEFTFASALTGLATISSLKMGMQVHAQLVRSGYGDDICVGNSLVDMYLKNQK 209
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ + FDE KD+ +WT + +G ++ P AL KM+ G + T+ + L A
Sbjct: 210 LEEGFKAFDEIPHKDVCSWTQMADGCLQWGEPRMALAVIAKMKKMGVKPNKFTLATALNA 269
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
A GK HG ++ G +D V +AL+DMY KCG D A VF + R V
Sbjct: 270 CACLASMEEGKQFHGLRIKLGS-DVDVCVDNALLDMYAKCGCMDSAWTVFRST--NSRSV 326
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
V W+ ++ Q + +A+++F M +V PN T VL AC+ G +D+G
Sbjct: 327 VSWTTMIMACAQNGQPGEALQIFDEMKETSVEPNYITFICVLYACSQGGFVDEG 380
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 131/260 (50%), Gaps = 8/260 (3%)
Query: 2 RQKGVEPDQHTFPLLLKMFS-KPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFI 60
R+ V+P++ TF L+ S V + IY+ + + G + + F NA ++A +G +
Sbjct: 51 REGFVKPNEFTFVSALQACSLSENVTQAYQIYSLVVRSGLECNVFLLNAFLTALVRNGKL 110
Query: 61 GSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVK-MRSTGTGVDALTVVSVLRA 119
A Q+F+ S ++D + W ++ GY+ + SE + F + M G D T S L
Sbjct: 111 TEALQIFETSPIRDTVTWNTMMGGYL--EFSSEQIPVFWRYMNREGVKPDEFTFASALTG 168
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
A G VH V++G D V ++L+DMY K ++ K FDE+P ++DV
Sbjct: 169 LATISSLKMGMQVHAQLVRSGYGD-DICVGNSLVDMYLKNQKLEEGFKAFDEIP--HKDV 225
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQY 239
W+ + G +Q + + A+ V M V PN+FTL + L+ACA ++++GK H
Sbjct: 226 CSWTQMADGCLQWGEPRMALAVIAKMKKMGVKPNKFTLATALNACACLASMEEGKQFHG- 284
Query: 240 IECKKVSLNSVELGTALVDM 259
+ K S V + AL+DM
Sbjct: 285 LRIKLGSDVDVCVDNALLDM 304
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 107/202 (52%), Gaps = 8/202 (3%)
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTG-TGVDALTVVSVLR 118
+ SA Q+FDE +++++W++++ G V N S+AL F M G + T VS L+
Sbjct: 8 LTSALQLFDEMPERNVVSWSSVMTGCVHNGGASDALSLFSCMHREGFVKPNEFTFVSALQ 67
Query: 119 AAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRD 178
A +++ + ++ V++G ++ + ++ +A + + G +A ++F+ P RD
Sbjct: 68 ACSLSENVTQAYQIYSLVVRSG-LECNVFLLNAFLTALVRNGKLTEALQIFETSP--IRD 124
Query: 179 VVCWSVLVAGYVQCNKFQDAIRVFWN-MLSDNVVPNEFTLTSVLSACAHSGALDQGKLVH 237
V W+ ++ GY++ + Q I VFW M + V P+EFT S L+ A +L G VH
Sbjct: 125 TVTWNTMMGGYLEFSSEQ--IPVFWRYMNREGVKPDEFTFASALTGLATISSLKMGMQVH 182
Query: 238 QYIECKKVSLNSVELGTALVDM 259
+ + + + +G +LVDM
Sbjct: 183 AQL-VRSGYGDDICVGNSLVDM 203
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 55/109 (50%), Gaps = 10/109 (9%)
Query: 155 MYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVV-PN 213
MY KC A ++FDEMP R+VV WS ++ G V DA+ +F M + V PN
Sbjct: 1 MYIKCKDLTSALQLFDEMP--ERNVVSWSSVMTGCVHNGGASDALSLFSCMHREGFVKPN 58
Query: 214 EFTLTSVLSACAHSGALDQGKLVHQYI-----ECKKVSLNSVELGTALV 257
EFT S L AC+ S + Q ++ + EC LN+ TALV
Sbjct: 59 EFTFVSALQACSLSENVTQAYQIYSLVVRSGLECNVFLLNA--FLTALV 105
>Medtr2g049310.1 | PPR containing plant-like protein | HC |
chr2:21732028-21729769 | 20130731
Length = 717
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 126/235 (53%), Gaps = 2/235 (0%)
Query: 1 MRQKGVEPDQHT-FPLLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M + G+ PD T P + + +E ++AQ+ + G D N+L+ ++
Sbjct: 309 MVRSGIRPDMFTAIPAISSITKLKSIEWGKQLHAQVIRNGSDYQVSVHNSLVDMYSTCAD 368
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ SA ++F + +++W+A+I GY +D EAL F++M+ +GT VD + V+++L A
Sbjct: 369 LNSARKIFGLIKDRTVVSWSAMIKGYAMHDNCLEALSLFIEMKLSGTKVDLVIVINILPA 428
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
A G ++ ++HG+ ++ L + ++L++ Y KCG + A K+F+E S +D+
Sbjct: 429 FAKIGALHYVGYLHGYSLKTNLDSLKS-LKTSLLNSYAKCGCIEMARKLFNEEKSSLKDI 487
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGK 234
V W+ ++ Y ++ ++ + V P+ T +L+AC +SG +D+GK
Sbjct: 488 VAWNSMITAYSNHGEWFQCFELYNQIKLSIVKPDHVTFLGMLTACVNSGLVDKGK 542
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 119/260 (45%), Gaps = 7/260 (2%)
Query: 1 MRQKGVEPDQHTFPLLLK-MFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
MR + V+P+ T LL+ ++ ++++ + + AL+S +A
Sbjct: 208 MRNENVQPNSVTLINLLRATVESNSLKIGKVLHSLVVASNLCKELTVNTALLSMYAKLDS 267
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ A +F++ KD++ W +I+ Y + P E+L+ M +G D T + + +
Sbjct: 268 LKDARLMFEKMPEKDVVVWNIMISVYSGSGCPKESLELVYCMVRSGIRPDMFTAIPAISS 327
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
+GK +H ++ G V ++L+DMY C + A K+F + R V
Sbjct: 328 ITKLKSIEWGKQLHAQVIRNGS-DYQVSVHNSLVDMYSTCADLNSARKIFGLI--KDRTV 384
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQY 239
V WS ++ GY + +A+ +F M + + ++L A A GAL +H Y
Sbjct: 385 VSWSAMIKGYAMHDNCLEALSLFIEMKLSGTKVDLVIVINILPAFAKIGALHYVGYLHGY 444
Query: 240 IECKKVSLNSVE-LGTALVD 258
K +L+S++ L T+L++
Sbjct: 445 --SLKTNLDSLKSLKTSLLN 462
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 103/235 (43%), Gaps = 19/235 (8%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
I+A+ F G + + LI +++N G + + ++F + D I + A +
Sbjct: 40 IHARFFLHGLHQNSSLSSKLIDSYSNFGLLHFSHKIFSFTENPDSIIYNAFLRNLFMFGE 99
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAA-AMAGDDNFGKWVHGFYVQAGRVQLDGYVW 149
+ L + +M D SVL++ + + HG V+ G D V
Sbjct: 100 YEKTLFLYKEMVQKSMCPDEDCCFSVLKSLFYVFHEKGLIMMAHGHVVKLGMDAFD-LVG 158
Query: 150 SALMDMY-FKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSD 208
+ L+++Y F G+ K ++ + W+ L+ + K ++ +F M ++
Sbjct: 159 NTLIELYGFLNGNGLVERKSVTKLNF-------WNNLIYEAYESGKIVESFELFCRMRNE 211
Query: 209 NVVPNEFTLTSVLSACAHSGALDQGKLVHQYIE----CKKVSLNSVELGTALVDM 259
NV PN TL ++L A S +L GK++H + CK++++N TAL+ M
Sbjct: 212 NVQPNSVTLINLLRATVESNSLKIGKVLHSLVVASNLCKELTVN-----TALLSM 261
>Medtr2g086150.1 | PPR containing plant-like protein | HC |
chr2:36227786-36230819 | 20130731
Length = 867
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 123/235 (52%), Gaps = 7/235 (2%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFI 60
MR++GV+P+ T+ +L + V + ++A++ K ++ G AL+ A+ G
Sbjct: 388 MRREGVKPNHFTYSAILTVHYPVFVSE---MHAEVIKTNYERSSSVGTALLDAYVKLGNT 444
Query: 61 GSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA- 119
A +VF+ KD++AW+A++ GY + EA K F ++ G + T SV+ A
Sbjct: 445 IDAVKVFEIIEAKDLMAWSAMLAGYAQTGETEEAAKLFHQLIKEGIKPNEFTFSSVINAC 504
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
A+ GK H + ++ R+ V SAL+ MY K G+ D A +VF RD+
Sbjct: 505 ASPTAAAEQGKQFHAYAIKM-RLNNALCVSSALVTMYAKRGNIDSAHEVFKRQ--KERDL 561
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGK 234
V W+ +++GY Q + + A+ VF M N+ + T V++AC H+G +++G+
Sbjct: 562 VSWNSMISGYSQHGQAKKALEVFDEMQKRNMDVDAVTFIGVITACTHAGLVEKGQ 616
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 139/265 (52%), Gaps = 17/265 (6%)
Query: 1 MRQKGVEPDQHTFPLLLK----MFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFAN 56
M+ GV+P TF ++K + +V+ ++ + K GF D+ AL+ A +
Sbjct: 286 MQLAGVKPTHMTFASVIKSCASLRELALVK---LMQCKALKSGFTTDQIVITALMVALSK 342
Query: 57 SGFIGSACQVFD-ESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVS 115
+ A +F K++++WTA+I+G ++N +A+ F +MR G + T +
Sbjct: 343 CKEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSA 402
Query: 116 VLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYS 175
+L F +H ++ + V +AL+D Y K G+ DA KVF+ +
Sbjct: 403 ILTVHYPV----FVSEMHAEVIKTN-YERSSSVGTALLDAYVKLGNTIDAVKVFEII--E 455
Query: 176 YRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAH-SGALDQGK 234
+D++ WS ++AGY Q + ++A ++F ++ + + PNEFT +SV++ACA + A +QGK
Sbjct: 456 AKDLMAWSAMLAGYAQTGETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQGK 515
Query: 235 LVHQYIECKKVSLNSVELGTALVDM 259
H Y +++ N++ + +ALV M
Sbjct: 516 QFHAYAIKMRLN-NALCVSSALVTM 539
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 116/223 (52%), Gaps = 3/223 (1%)
Query: 1 MRQKGVEPDQHTFPLLLK-MFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M+ +GV P+++T ++ + ++ VV ++A + K GF+ N+LIS ++ G
Sbjct: 185 MQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVKHGFEEAIPVFNSLISLYSRLGM 244
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ A VFD+ ++D + W ++I GYV+N E + F KM+ G +T SV+++
Sbjct: 245 LRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASVIKS 304
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
A + K + +++G D V +ALM KC DDA +F M ++V
Sbjct: 305 CASLRELALVKLMQCKALKSG-FTTDQIVITALMVALSKCKEMDDALSLFSLMEEG-KNV 362
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLS 222
V W+ +++G +Q A+ +F M + V PN FT +++L+
Sbjct: 363 VSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAILT 405
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 105/213 (49%), Gaps = 7/213 (3%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
++ Q K G G +L+ + + + +VFDE +++++WT+L+ GY N L
Sbjct: 115 VHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWTSLLAGYSWNGL 174
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
+ F +M+ G + TV +V+ A G G VH V+ G + V++
Sbjct: 175 YGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVKHG-FEEAIPVFN 233
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV 210
+L+ +Y + G DA VFD+M RD V W+ ++AGYV+ + + +F M V
Sbjct: 234 SLISLYSRLGMLRDARDVFDKM--EIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGV 291
Query: 211 VPNEFTLTSVLSACAHSGALDQGKLVHQYIECK 243
P T SV+ +CA +L + LV + ++CK
Sbjct: 292 KPTHMTFASVIKSCA---SLRELALV-KLMQCK 320
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 95/193 (49%), Gaps = 2/193 (1%)
Query: 3 QKGVEPDQHTFPLLLKMFSKPVV--EDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFI 60
++G++P++ TF ++ + P E +A K+ + +AL++ +A G I
Sbjct: 487 KEGIKPNEFTFSSVINACASPTAAAEQGKQFHAYAIKMRLNNALCVSSALVTMYAKRGNI 546
Query: 61 GSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAA 120
SA +VF +D+++W ++I+GY ++ +AL+ F +M+ VDA+T + V+ A
Sbjct: 547 DSAHEVFKRQKERDLVSWNSMISGYSQHGQAKKALEVFDEMQKRNMDVDAVTFIGVITAC 606
Query: 121 AMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVV 180
AG G+ + + +S ++D+Y + G + A + +EMP+ V
Sbjct: 607 THAGLVEKGQKYFNSMINDHHINPTMKHYSCMIDLYSRAGMLEKAMGIINEMPFPPGATV 666
Query: 181 CWSVLVAGYVQCN 193
++L A V N
Sbjct: 667 WRTLLGAARVHRN 679
>Medtr8g031210.1 | PPR containing plant-like protein | HC |
chr8:11676602-11671237 | 20130731
Length = 703
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 116/229 (50%), Gaps = 4/229 (1%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
++ + + G D N+L+ + +G I +A +F E S KDII+W+ + Y N
Sbjct: 231 VHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMFACYADNGA 290
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
++ L F++M + +TVVSVLRA A + G +H V G +++ V +
Sbjct: 291 ETDVLDLFIEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYG-FEMETTVST 349
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV 210
ALMDMY KC + A F+ MP +DV+ W+VL +GY +++ VF NMLS
Sbjct: 350 ALMDMYMKCFSPEKAVDFFNRMP--KKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGT 407
Query: 211 VPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
P+ L +L+ + G L Q H ++ K N+ +G +L+++
Sbjct: 408 RPDAIALVKILTTVSELGILQQAVCFHAFV-IKNGFENNQFIGASLIEV 455
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 120/233 (51%), Gaps = 9/233 (3%)
Query: 30 MIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKND 89
MI+ + K+ D D F G+ALI + G + A +VF E D++ WT++++GY ++
Sbjct: 128 MIHGFLKKVRIDNDMFVGSALIDLYTKCGQMNDAVEVFMEYPKPDVVLWTSIVSGYEQSG 187
Query: 90 LPSEALKCFVKM-RSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGY- 147
P AL F +M S D +T+VSV A A + G+ VHGF + G LD
Sbjct: 188 SPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKG---LDNKL 244
Query: 148 -VWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNML 206
+ ++L+ +Y K G +A +F EM S +D++ WS + A Y D + +F ML
Sbjct: 245 CLANSLLHLYGKTGSIKNASNLFREM--SDKDIISWSTMFACYADNGAETDVLDLFIEML 302
Query: 207 SDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
+ PN T+ SVL ACA L++G +H+ + + + TAL+DM
Sbjct: 303 DKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYGFEMETT-VSTALMDM 354
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 111/210 (52%), Gaps = 4/210 (1%)
Query: 25 VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALING 84
+E+ I+ GF+++ AL+ + A F+ KD+IAW L +G
Sbjct: 326 LEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDFFNRMPKKDVIAWAVLFSG 385
Query: 85 YVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQL 144
Y N + E++ F M S+GT DA+ +V +L + G H F ++ G +
Sbjct: 386 YADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTVSELGILQQAVCFHAFVIKNG-FEN 444
Query: 145 DGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWN 204
+ ++ ++L+++Y KC +DA KVF M +Y+DVV WS ++A Y + ++A++ F+
Sbjct: 445 NQFIGASLIEVYAKCSSIEDANKVFKGM--TYKDVVTWSSIIAAYGFHGQGEEALKFFYQ 502
Query: 205 MLS-DNVVPNEFTLTSVLSACAHSGALDQG 233
M + + PN T S+LSAC+HSG + +G
Sbjct: 503 MANHSDTKPNNVTFISILSACSHSGLIKEG 532
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/235 (32%), Positives = 117/235 (49%), Gaps = 10/235 (4%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
+++Q K+G D F L +A I A ++F E+ K + W AL+ Y
Sbjct: 23 LHSQCLKVGLVHDSFIVTKLNVLYARYASIHHAHKLFQETPHKTVYLWNALLRSYCFEGE 82
Query: 91 PSEALKCFVKMR-----STGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLD 145
E L F +M+ S D +V L++ A GK +HGF ++ R+ D
Sbjct: 83 WVETLSLFCQMKNVCSVSIEEKPDNYSVSIALKSCAGLRKLLLGKMIHGF-LKKVRIDND 141
Query: 146 GYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNM 205
+V SAL+D+Y KCG +DA +VF M Y DVV W+ +V+GY Q + A+ F M
Sbjct: 142 MFVGSALIDLYTKCGQMNDAVEVF--MEYPKPDVVLWTSIVSGYEQSGSPELALAFFSRM 199
Query: 206 -LSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
+S+ V P+ TL SV SACA G+ VH +++ K + N + L +L+ +
Sbjct: 200 VVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLD-NKLCLANSLLHL 253
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 85/175 (48%), Gaps = 2/175 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M G PD +L S+ +++ +A + K GF+ ++F G +LI +A
Sbjct: 402 MLSSGTRPDAIALVKILTTVSELGILQQAVCFHAFVIKNGFENNQFIGASLIEVYAKCSS 461
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKM-RSTGTGVDALTVVSVLR 118
I A +VF + KD++ W+++I Y + EALK F +M + T + +T +S+L
Sbjct: 462 IEDANKVFKGMTYKDVVTWSSIIAAYGFHGQGEEALKFFYQMANHSDTKPNNVTFISILS 521
Query: 119 AAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMP 173
A + +G G + V +++ + ++ ++D+ + G D A + + MP
Sbjct: 522 ACSHSGLIKEGINMFDIMVNKYKLKPNSEHYAIMVDLLGRMGELDMALDLINNMP 576
>Medtr8g031210.3 | PPR containing plant-like protein | HC |
chr8:11673838-11671237 | 20130731
Length = 703
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 116/229 (50%), Gaps = 4/229 (1%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
++ + + G D N+L+ + +G I +A +F E S KDII+W+ + Y N
Sbjct: 231 VHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMFACYADNGA 290
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
++ L F++M + +TVVSVLRA A + G +H V G +++ V +
Sbjct: 291 ETDVLDLFIEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYG-FEMETTVST 349
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV 210
ALMDMY KC + A F+ MP +DV+ W+VL +GY +++ VF NMLS
Sbjct: 350 ALMDMYMKCFSPEKAVDFFNRMP--KKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGT 407
Query: 211 VPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
P+ L +L+ + G L Q H ++ K N+ +G +L+++
Sbjct: 408 RPDAIALVKILTTVSELGILQQAVCFHAFV-IKNGFENNQFIGASLIEV 455
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 120/233 (51%), Gaps = 9/233 (3%)
Query: 30 MIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKND 89
MI+ + K+ D D F G+ALI + G + A +VF E D++ WT++++GY ++
Sbjct: 128 MIHGFLKKVRIDNDMFVGSALIDLYTKCGQMNDAVEVFMEYPKPDVVLWTSIVSGYEQSG 187
Query: 90 LPSEALKCFVKM-RSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGY- 147
P AL F +M S D +T+VSV A A + G+ VHGF + G LD
Sbjct: 188 SPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKG---LDNKL 244
Query: 148 -VWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNML 206
+ ++L+ +Y K G +A +F EM S +D++ WS + A Y D + +F ML
Sbjct: 245 CLANSLLHLYGKTGSIKNASNLFREM--SDKDIISWSTMFACYADNGAETDVLDLFIEML 302
Query: 207 SDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
+ PN T+ SVL ACA L++G +H+ + + + TAL+DM
Sbjct: 303 DKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYGFEMETT-VSTALMDM 354
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 111/210 (52%), Gaps = 4/210 (1%)
Query: 25 VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALING 84
+E+ I+ GF+++ AL+ + A F+ KD+IAW L +G
Sbjct: 326 LEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDFFNRMPKKDVIAWAVLFSG 385
Query: 85 YVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQL 144
Y N + E++ F M S+GT DA+ +V +L + G H F ++ G +
Sbjct: 386 YADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTVSELGILQQAVCFHAFVIKNG-FEN 444
Query: 145 DGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWN 204
+ ++ ++L+++Y KC +DA KVF M +Y+DVV WS ++A Y + ++A++ F+
Sbjct: 445 NQFIGASLIEVYAKCSSIEDANKVFKGM--TYKDVVTWSSIIAAYGFHGQGEEALKFFYQ 502
Query: 205 MLS-DNVVPNEFTLTSVLSACAHSGALDQG 233
M + + PN T S+LSAC+HSG + +G
Sbjct: 503 MANHSDTKPNNVTFISILSACSHSGLIKEG 532
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/235 (32%), Positives = 117/235 (49%), Gaps = 10/235 (4%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
+++Q K+G D F L +A I A ++F E+ K + W AL+ Y
Sbjct: 23 LHSQCLKVGLVHDSFIVTKLNVLYARYASIHHAHKLFQETPHKTVYLWNALLRSYCFEGE 82
Query: 91 PSEALKCFVKMR-----STGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLD 145
E L F +M+ S D +V L++ A GK +HGF ++ R+ D
Sbjct: 83 WVETLSLFCQMKNVCSVSIEEKPDNYSVSIALKSCAGLRKLLLGKMIHGF-LKKVRIDND 141
Query: 146 GYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNM 205
+V SAL+D+Y KCG +DA +VF M Y DVV W+ +V+GY Q + A+ F M
Sbjct: 142 MFVGSALIDLYTKCGQMNDAVEVF--MEYPKPDVVLWTSIVSGYEQSGSPELALAFFSRM 199
Query: 206 -LSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
+S+ V P+ TL SV SACA G+ VH +++ K + N + L +L+ +
Sbjct: 200 VVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLD-NKLCLANSLLHL 253
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 85/175 (48%), Gaps = 2/175 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M G PD +L S+ +++ +A + K GF+ ++F G +LI +A
Sbjct: 402 MLSSGTRPDAIALVKILTTVSELGILQQAVCFHAFVIKNGFENNQFIGASLIEVYAKCSS 461
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKM-RSTGTGVDALTVVSVLR 118
I A +VF + KD++ W+++I Y + EALK F +M + T + +T +S+L
Sbjct: 462 IEDANKVFKGMTYKDVVTWSSIIAAYGFHGQGEEALKFFYQMANHSDTKPNNVTFISILS 521
Query: 119 AAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMP 173
A + +G G + V +++ + ++ ++D+ + G D A + + MP
Sbjct: 522 ACSHSGLIKEGINMFDIMVNKYKLKPNSEHYAIMVDLLGRMGELDMALDLINNMP 576
>Medtr8g031210.2 | PPR containing plant-like protein | HC |
chr8:11676602-11671244 | 20130731
Length = 611
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 116/229 (50%), Gaps = 4/229 (1%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
++ + + G D N+L+ + +G I +A +F E S KDII+W+ + Y N
Sbjct: 139 VHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMFACYADNGA 198
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
++ L F++M + +TVVSVLRA A + G +H V G +++ V +
Sbjct: 199 ETDVLDLFIEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYG-FEMETTVST 257
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV 210
ALMDMY KC + A F+ MP +DV+ W+VL +GY +++ VF NMLS
Sbjct: 258 ALMDMYMKCFSPEKAVDFFNRMP--KKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGT 315
Query: 211 VPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
P+ L +L+ + G L Q H ++ K N+ +G +L+++
Sbjct: 316 RPDAIALVKILTTVSELGILQQAVCFHAFV-IKNGFENNQFIGASLIEV 363
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 120/233 (51%), Gaps = 9/233 (3%)
Query: 30 MIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKND 89
MI+ + K+ D D F G+ALI + G + A +VF E D++ WT++++GY ++
Sbjct: 36 MIHGFLKKVRIDNDMFVGSALIDLYTKCGQMNDAVEVFMEYPKPDVVLWTSIVSGYEQSG 95
Query: 90 LPSEALKCFVKM-RSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGY- 147
P AL F +M S D +T+VSV A A + G+ VHGF + G LD
Sbjct: 96 SPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKG---LDNKL 152
Query: 148 -VWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNML 206
+ ++L+ +Y K G +A +F EM S +D++ WS + A Y D + +F ML
Sbjct: 153 CLANSLLHLYGKTGSIKNASNLFREM--SDKDIISWSTMFACYADNGAETDVLDLFIEML 210
Query: 207 SDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
+ PN T+ SVL ACA L++G +H+ + + + TAL+DM
Sbjct: 211 DKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYGFEMETT-VSTALMDM 262
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 111/210 (52%), Gaps = 4/210 (1%)
Query: 25 VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALING 84
+E+ I+ GF+++ AL+ + A F+ KD+IAW L +G
Sbjct: 234 LEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDFFNRMPKKDVIAWAVLFSG 293
Query: 85 YVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQL 144
Y N + E++ F M S+GT DA+ +V +L + G H F ++ G +
Sbjct: 294 YADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTVSELGILQQAVCFHAFVIKNG-FEN 352
Query: 145 DGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWN 204
+ ++ ++L+++Y KC +DA KVF M +Y+DVV WS ++A Y + ++A++ F+
Sbjct: 353 NQFIGASLIEVYAKCSSIEDANKVFKGM--TYKDVVTWSSIIAAYGFHGQGEEALKFFYQ 410
Query: 205 MLS-DNVVPNEFTLTSVLSACAHSGALDQG 233
M + + PN T S+LSAC+HSG + +G
Sbjct: 411 MANHSDTKPNNVTFISILSACSHSGLIKEG 440
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 86/175 (49%), Gaps = 2/175 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M G PD +L S+ +++ +A + K GF+ ++F G +LI +A
Sbjct: 310 MLSSGTRPDAIALVKILTTVSELGILQQAVCFHAFVIKNGFENNQFIGASLIEVYAKCSS 369
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRS-TGTGVDALTVVSVLR 118
I A +VF + KD++ W+++I Y + EALK F +M + + T + +T +S+L
Sbjct: 370 IEDANKVFKGMTYKDVVTWSSIIAAYGFHGQGEEALKFFYQMANHSDTKPNNVTFISILS 429
Query: 119 AAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMP 173
A + +G G + V +++ + ++ ++D+ + G D A + + MP
Sbjct: 430 ACSHSGLIKEGINMFDIMVNKYKLKPNSEHYAIMVDLLGRMGELDMALDLINNMP 484
>Medtr3g005330.1 | PPR containing plant-like protein | HC |
chr3:156847-154639 | 20130731
Length = 479
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/241 (31%), Positives = 127/241 (52%), Gaps = 12/241 (4%)
Query: 3 QKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIG 61
Q PD TF +LK+ ++ V ++ +FK GF+ + N+LI + I
Sbjct: 103 QLAHRPDNFTFSFILKIIARLRFVNLGKQLHCSLFKFGFENHTYVRNSLIHMYGMLKDIE 162
Query: 62 SACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKM-RSTGTGV----DALTVVSV 116
A Q+F+E ++++W ++I+ +V +EA+ F KM + G+ D T+V
Sbjct: 163 IAHQLFEEMYQPNLVSWNSIIDCHVYCGKYNEAIDLFTKMVQQQHNGMELQPDHATLVVT 222
Query: 117 LRAAAMAGDDNFGKWVHGFYVQAGRVQLDG--YVWSALMDMYFKCGHCDDACKVFDEMPY 174
L A G +FG+ VH F V+ G V++AL+DMY KCG ++A + F M
Sbjct: 223 LSACGAIGSLDFGRKVHSF-VRDGVNSFGESISVFNALVDMYAKCGAVEEAYETFSNM-- 279
Query: 175 SYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV-VPNEFTLTSVLSACAHSGALDQG 233
++VV W+V++ G+ ++A+ +F ML +NV P+E T VL AC+H G +D+G
Sbjct: 280 KRKNVVSWNVMILGFASHGNGEEALALFTRMLHENVERPDEITFLCVLCACSHGGLVDEG 339
Query: 234 K 234
+
Sbjct: 340 R 340
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 107/235 (45%), Gaps = 9/235 (3%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
I+A+IF GF+ + +I A S + A VFD+ D W +I G+ +
Sbjct: 31 IHARIFLTGFNHNLILSGKIIMFCAVSQNMNYALNVFDKIPKPDSFLWNTMIRGFGNSTT 90
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
S F K D T +L+ A N GK +H + G + YV +
Sbjct: 91 HSHNAIHFFKRMQLAHRPDNFTFSFILKIIARLRFVNLGKQLHCSLFKFG-FENHTYVRN 149
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDN- 209
+L+ MY + A ++F+EM ++V W+ ++ +V C K+ +AI +F M+
Sbjct: 150 SLIHMYGMLKDIEIAHQLFEEMYQP--NLVSWNSIIDCHVYCGKYNEAIDLFTKMVQQQH 207
Query: 210 ----VVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSL-NSVELGTALVDM 259
+ P+ TL LSAC G+LD G+ VH ++ S S+ + ALVDM
Sbjct: 208 NGMELQPDHATLVVTLSACGAIGSLDFGRKVHSFVRDGVNSFGESISVFNALVDM 262
>Medtr8g087980.1 | PPR containing plant-like protein | HC |
chr8:36412954-36411351 | 20130731
Length = 515
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 122/263 (46%), Gaps = 43/263 (16%)
Query: 1 MRQKGVEPDQHTFPLLLKM-FSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M + P+ HTF L+K S +E F + KLG D + +++I+AF+
Sbjct: 79 MLNTNIRPNSHTFTTLVKACVSLSSLEQVFTLS---MKLGNSSDVYFVSSVINAFSKHSA 135
Query: 60 IGSACQVFDESSVKDIIAWT-------------------------------ALINGYVKN 88
I A QVFDE S ++++ WT A+++GYV+N
Sbjct: 136 IHLARQVFDECSNRNVVCWTSLVSGYCSCGLVNEARDVFDKMPLRNEASYSAMVSGYVRN 195
Query: 89 DLPSEALKCFVKMRSTGTGVDALT-----VVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQ 143
SE ++ F +++ G L +VSVL A M G GKW+H YV+ ++
Sbjct: 196 GFFSEGVQLFRELKKKDKGCACLKFNGALLVSVLNACTMVGAFEEGKWIHS-YVEENGLE 254
Query: 144 LDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFW 203
D + +AL+D Y KCG A KVF++MP +DV WS ++ G + A+ +F
Sbjct: 255 YDLELGTALIDFYMKCGWVKGAEKVFNKMP--VKDVATWSAMILGLAINGNNKMALELFE 312
Query: 204 NMLSDNVVPNEFTLTSVLSACAH 226
M PNE T VL+AC H
Sbjct: 313 KMEKVGPKPNEVTFVGVLTACNH 335
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 111/258 (43%), Gaps = 47/258 (18%)
Query: 41 DLDRFA--GNALISAFANS--GFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALK 96
+L RF+ + +++ FA S G A +F +I + ++I Y N +
Sbjct: 15 NLTRFSYISSRILAFFALSPRGDFRYAETLFTHIPNPNIFDYNSIITSYTTNSQFHKLFF 74
Query: 97 CFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMY 156
F KM +T ++ T ++++A + V ++ G D Y S++++ +
Sbjct: 75 VFTKMLNTNIRPNSHTFTTLVKACVSLSSL---EQVFTLSMKLGNSS-DVYFVSSVINAF 130
Query: 157 FKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVF----------WNML 206
K A +VFDE S R+VVCW+ LV+GY C +A VF ++ +
Sbjct: 131 SKHSAIHLARQVFDEC--SNRNVVCWTSLVSGYCSCGLVNEARDVFDKMPLRNEASYSAM 188
Query: 207 SDNVVPNEF--------------------------TLTSVLSACAHSGALDQGKLVHQYI 240
V N F L SVL+AC GA ++GK +H Y+
Sbjct: 189 VSGYVRNGFFSEGVQLFRELKKKDKGCACLKFNGALLVSVLNACTMVGAFEEGKWIHSYV 248
Query: 241 ECKKVSLNSVELGTALVD 258
E + + +ELGTAL+D
Sbjct: 249 EENGLEYD-LELGTALID 265
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 74/165 (44%), Gaps = 5/165 (3%)
Query: 26 EDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGY 85
E+ I++ + + G + D G ALI + G++ A +VF++ VKD+ W+A+I G
Sbjct: 239 EEGKWIHSYVEENGLEYDLELGTALIDFYMKCGWVKGAEKVFNKMPVKDVATWSAMILGL 298
Query: 86 VKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLD 145
N AL+ F KM G + +T V VL A FG+ F + + + +
Sbjct: 299 AINGNNKMALELFEKMEKVGPKPNEVTFVGVLTACNH--KSLFGESARLFGIMSEKYNIT 356
Query: 146 GYV--WSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAG 188
+ + ++D+ + G A + M + D W L+ G
Sbjct: 357 PSIEHYGCVVDVLARSGQVKKALTFINSM-HIEPDGAIWGSLLNG 400
>Medtr1g103840.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:46998568-47001126 | 20130731
Length = 782
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/252 (32%), Positives = 122/252 (48%), Gaps = 40/252 (15%)
Query: 43 DRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKM- 101
D+ N +IS SG A +FD+ + +DII+W ++I GY S+AL+ F M
Sbjct: 207 DKSTWNIMISMHMQSGRFDVALALFDQMTDRDIISWNSIIAGYCHQGYDSKALETFSDMF 266
Query: 102 RSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMY----- 156
RS+ D T+ SVL A A GK +H + V+A + + G V +AL+ MY
Sbjct: 267 RSSSLKPDKFTLGSVLSACANLESLKLGKQIHAYIVRAD-IDISGAVGNALISMYAKSGA 325
Query: 157 ----------------------------FKCGHCDDACKVFDEMPYSYRDVVCWSVLVAG 188
K G + A ++FD + RDVV W+ ++ G
Sbjct: 326 VEVARTIVELRGTSNINVIAFTSLLNGYVKIGDVNPAREIFDSL--KCRDVVAWTAMIVG 383
Query: 189 YVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQY-IECKKVSL 247
Y Q + +DA+ +F M+S+ PN +TL +VLS + +LD GK +H I K+VS
Sbjct: 384 YAQNSLLKDALELFRLMISEGPRPNSYTLAAVLSVFSSLASLDHGKQLHAIAIRLKEVS- 442
Query: 248 NSVELGTALVDM 259
SV +G AL+ M
Sbjct: 443 -SVSVGNALITM 453
Score = 111 bits (277), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 125/267 (46%), Gaps = 36/267 (13%)
Query: 2 RQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFI 60
R ++PD+ T +L + ++ I+A I + D+ GNALIS +A SG +
Sbjct: 267 RSSSLKPDKFTLGSVLSACANLESLKLGKQIHAYIVRADIDISGAVGNALISMYAKSGAV 326
Query: 61 ---------------------------------GSACQVFDESSVKDIIAWTALINGYVK 87
A ++FD +D++AWTA+I GY +
Sbjct: 327 EVARTIVELRGTSNINVIAFTSLLNGYVKIGDVNPAREIFDSLKCRDVVAWTAMIVGYAQ 386
Query: 88 NDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGY 147
N L +AL+ F M S G ++ T+ +VL + + GK +H ++ V
Sbjct: 387 NSLLKDALELFRLMISEGPRPNSYTLAAVLSVFSSLASLDHGKQLHAIAIRLKEVS-SVS 445
Query: 148 VWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLS 207
V +AL+ MY K G DA KVF+++ + RD + W+ ++ Q +AI +F +ML
Sbjct: 446 VGNALITMYSKSGCIKDARKVFNQI-CTERDTLTWTSMIIALAQHGLGNEAIELFEDMLK 504
Query: 208 DNVVPNEFTLTSVLSACAHSGALDQGK 234
N+ P+ T VLSAC H G ++QGK
Sbjct: 505 FNLKPDHITYVGVLSACTHVGLVEQGK 531
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 122/246 (49%), Gaps = 34/246 (13%)
Query: 45 FAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRST 104
F+ N L+S++A G I +A ++FD+ D ++WT +I GY + + A+ F +M S
Sbjct: 77 FSWNTLLSSYAKGGNIETARRLFDDIPEPDSVSWTTMIVGYNQMGRFNTAIHTFQQMISD 136
Query: 105 GTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAG------------------------ 140
G T +VL + G + GK VH F V+ G
Sbjct: 137 GILPTQFTFTNVLASCVATGSLDIGKKVHSFVVKLGLSGVVPVANSLLNMYVKSGDSLRV 196
Query: 141 -----RVQL-DGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNK 194
R++L D W+ ++ M+ + G D A +FD+M + RD++ W+ ++AGY
Sbjct: 197 KAVFDRMRLRDKSTWNIMISMHMQSGRFDVALALFDQM--TDRDIISWNSIIAGYCHQGY 254
Query: 195 FQDAIRVFWNML-SDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELG 253
A+ F +M S ++ P++FTL SVLSACA+ +L GK +H YI + ++ +G
Sbjct: 255 DSKALETFSDMFRSSSLKPDKFTLGSVLSACANLESLKLGKQIHAYIVRADIDISGA-VG 313
Query: 254 TALVDM 259
AL+ M
Sbjct: 314 NALISM 319
>Medtr4g006900.1 | PPR containing plant-like protein | HC |
chr4:850780-853131 | 20130731
Length = 688
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 124/262 (47%), Gaps = 6/262 (2%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
MR+ GVE + ++F ++K F+ P +A + K G LI + G
Sbjct: 208 MRELGVELNVYSFSSVIKSFAAAPAFYQGLKTHALLIKNGLVDSDILRTCLIDLYFKCGK 267
Query: 60 IGSACQVFDE--SSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVL 117
+ A +VF+E +D++ W +++G+ N L E L+ M G +++ + VL
Sbjct: 268 VKLARRVFEEIPERERDVVVWGTMLSGFSHNRLQREVLEYVKWMVEEGIYPNSVIMTIVL 327
Query: 118 RAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYR 177
G+ VH F ++ V SAL+DMY KCG A VF P R
Sbjct: 328 PVIGEVCKRRLGQEVHAFVLKTKSYAEKVPVQSALIDMYCKCGDLSSARAVFYSSPE--R 385
Query: 178 DVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVH 237
+VVCW+ L++GY + + A+R M + P+ T+ +VL CA AL+QGK +H
Sbjct: 386 NVVCWTALMSGYASVGRLEQALRAVIWMQQEGFRPDVVTVATVLPICAQLRALEQGKQIH 445
Query: 238 QYIECKKVSLNSVELGTALVDM 259
Y K L +V L ++LV M
Sbjct: 446 AY-ALKHWFLPNVSLSSSLVVM 466
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 112/236 (47%), Gaps = 10/236 (4%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDE-SSVKDIIAWTALINGYV--- 86
I+ I G + + F L+ + + G + A ++FDE + W AL+ G V
Sbjct: 133 IHTHIRINGLEKNTFLLTKLVQMYTSCGSLEDALKLFDELPDESSVYPWNALLRGTVVFG 192
Query: 87 -KNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLD 145
+ + +K + KMR G ++ + SV+++ A A G H ++ G V D
Sbjct: 193 GRKKQYIDVVKTYSKMRELGVELNVYSFSSVIKSFAAAPAFYQGLKTHALLIKNGLVDSD 252
Query: 146 GYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAI--RVFW 203
+ + L+D+YFKCG A +VF+E+P RDVV W +++G+ N+ Q + V W
Sbjct: 253 -ILRTCLIDLYFKCGKVKLARRVFEEIPERERDVVVWGTMLSGFSH-NRLQREVLEYVKW 310
Query: 204 NMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
M+ + + PN +T VL G+ VH ++ K V + +AL+DM
Sbjct: 311 -MVEEGIYPNSVIMTIVLPVIGEVCKRRLGQEVHAFVLKTKSYAEKVPVQSALIDM 365
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 110/229 (48%), Gaps = 4/229 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M+Q+G PD T +L + ++ +E I+A K F + ++L+ ++ G
Sbjct: 413 MQQEGFRPDVVTVATVLPICAQLRALEQGKQIHAYALKHWFLPNVSLSSSLVVMYSKCGV 472
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ + ++F + +++I+WTA+I+ Y++N EAL M+ + D++ + +L
Sbjct: 473 VEYSTRLFGDMEQRNVISWTAMIDSYIENGHLYEALGVIRSMQLSKHRPDSVAMSRMLSV 532
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
GK +HG ++ + +V + L++MY G D A VF +P +
Sbjct: 533 CGELKLLKHGKEIHGQILKRDFTSVH-FVSAELINMYGALGDVDKANLVFSAVPV--KGS 589
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSG 228
+ W+ L+ Y +Q AI +F M SD PN FT +LS C +G
Sbjct: 590 MTWTALIRAYEYNELYQGAIDLFDQMRSDRFSPNPFTFEVILSVCERAG 638
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 93/191 (48%), Gaps = 7/191 (3%)
Query: 73 KDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWV 132
K+ I+ I + + + +EAL + G V+A T S++ A + GK +
Sbjct: 74 KNPISIYKDIKNFARQNKLNEALAILDYVDQNGIPVNATTFSSLIAACIRTNSLSIGKQI 133
Query: 133 HGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYV-- 190
H +++ ++ + ++ + L+ MY CG +DA K+FDE+P V W+ L+ G V
Sbjct: 134 HT-HIRINGLEKNTFLLTKLVQMYTSCGSLEDALKLFDELP-DESSVYPWNALLRGTVVF 191
Query: 191 --QCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLN 248
+ ++ D ++ + M V N ++ +SV+ + A + A QG H + K ++
Sbjct: 192 GGRKKQYIDVVKTYSKMRELGVELNVYSFSSVIKSFAAAPAFYQGLKTHALL-IKNGLVD 250
Query: 249 SVELGTALVDM 259
S L T L+D+
Sbjct: 251 SDILRTCLIDL 261
>Medtr4g014050.1 | PPR containing plant-like protein | HC |
chr4:3891221-3897546 | 20130731
Length = 935
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 120/243 (49%), Gaps = 4/243 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKP-VVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M + V D HTF + LK ++ ++ I+AQ K GF+ + N L + ++
Sbjct: 243 MWRSKVGYDSHTFAVALKASAESGLLHYGKAIHAQTIKQGFNETAYVVNTLGTMYSKCRK 302
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
++F + S D+++WT LI YV+ AL F +MR + + T SV+ A
Sbjct: 303 PDYVMRLFGKMSTPDVVSWTNLIMTYVQMGDEERALDAFKRMRKSDVSPNEYTFASVISA 362
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
A +G+ +HG ++ G V V ++++ +Y KCG +A VFD M + +D+
Sbjct: 363 CANLAITKWGEQIHGHALRLGLVDALS-VSNSIITLYSKCGLLQEASLVFDGM--TRKDI 419
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQY 239
+ WS +++ Y Q + ++A M + PNEF L SVLS C L+ GK VH Y
Sbjct: 420 ISWSTIISVYCQGSHAKEAFNYLSWMSREGPKPNEFALASVLSVCGSMALLEPGKQVHAY 479
Query: 240 IEC 242
C
Sbjct: 480 ALC 482
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 100/195 (51%), Gaps = 3/195 (1%)
Query: 45 FAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRST 104
F +AL+ + G C VF+ + +++++WTA+I G V + L F +M +
Sbjct: 187 FVSSALVDMYMKVGKTEQGCSVFENMTTRNVVSWTAVIVGLVHAGCSLDGLSYFSEMWRS 246
Query: 105 GTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDD 164
G D+ T L+A+A +G ++GK +H ++ G YV + L MY KC D
Sbjct: 247 KVGYDSHTFAVALKASAESGLLHYGKAIHAQTIKQG-FNETAYVVNTLGTMYSKCRKPDY 305
Query: 165 ACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSAC 224
++F +M S DVV W+ L+ YVQ + A+ F M +V PNE+T SV+SAC
Sbjct: 306 VMRLFGKM--STPDVVSWTNLIMTYVQMGDEERALDAFKRMRKSDVSPNEYTFASVISAC 363
Query: 225 AHSGALDQGKLVHQY 239
A+ G+ +H +
Sbjct: 364 ANLAITKWGEQIHGH 378
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 95/191 (49%), Gaps = 4/191 (2%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKM-RSTGT 106
N+ + G I A +F++ S +D I+WT LI GYV +EAL F M +G
Sbjct: 88 NSQLKQLMKLGKICEARDMFNKMSHRDEISWTNLIAGYVNAANSNEALILFSNMWVDSGL 147
Query: 107 GVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDAC 166
D V L+A A+ + FG+ +HGF V++G + +V SAL+DMY K G + C
Sbjct: 148 QKDQFVVSVALKACALGMNVYFGELLHGFSVKSGLIN-SVFVSSALVDMYMKVGKTEQGC 206
Query: 167 KVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAH 226
VF+ M + R+VV W+ ++ G V D + F M V + T L A A
Sbjct: 207 SVFENM--TTRNVVSWTAVIVGLVHAGCSLDGLSYFSEMWRSKVGYDSHTFAVALKASAE 264
Query: 227 SGALDQGKLVH 237
SG L GK +H
Sbjct: 265 SGLLHYGKAIH 275
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 115/251 (45%), Gaps = 13/251 (5%)
Query: 1 MRQKGVEPDQHTFPLLLKMF-SKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M ++G +P++ +L + S ++E ++A +G D + +ALIS ++ SG
Sbjct: 445 MSREGPKPNEFALASVLSVCGSMALLEPGKQVHAYALCIGLDHETMVHSALISMYSRSGN 504
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ A ++FD DI++WTA+INGY ++ EA+ F + S G D +T + +L A
Sbjct: 505 LQEASKIFDSIKNNDIVSWTAMINGYAEHGYSQEAISLFENISSVGLMPDYVTFIGILTA 564
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
AG + G + + ++ + ++D+ + G +A + MP+ DV
Sbjct: 565 CNHAGLVDLGFYYYKLMTNEYQIAPSKEHYGCIIDLLCRAGRLSEAEHMVRNMPFPCDDV 624
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWN-----MLSDNVVPNEFTLTSVLSACAHSGALDQGK 234
V WS L+ C D R W L N TL ++ SA SG ++
Sbjct: 625 V-WSTLLRA---CRDHGDLDRAIWAAEQMLRLHPNSAGAHITLANIYSA---SGRREEAA 677
Query: 235 LVHQYIECKKV 245
V + ++ K V
Sbjct: 678 HVRKLMKSKGV 688
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 61/108 (56%), Gaps = 4/108 (3%)
Query: 153 MDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDN-VV 211
+ K G +A +F++M S+RD + W+ L+AGYV +A+ +F NM D+ +
Sbjct: 91 LKQLMKLGKICEARDMFNKM--SHRDEISWTNLIAGYVNAANSNEALILFSNMWVDSGLQ 148
Query: 212 PNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
++F ++ L ACA + G+L+H + K +NSV + +ALVDM
Sbjct: 149 KDQFVVSVALKACALGMNVYFGELLHGF-SVKSGLINSVFVSSALVDM 195
>Medtr6g075280.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:27881892-27885186 | 20130731
Length = 684
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 123/233 (52%), Gaps = 10/233 (4%)
Query: 5 GVEPDQHTFPLLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSAC 64
G+E D++ LL M+ + P M +++F + + NA ++ + +G + +A
Sbjct: 129 GLESDKYVVSALLDMYGRCGCA-PEM--SRVFDEIDQTEIGSLNAFLTGLSRNGLVDTAL 185
Query: 65 QVFDESSVKD----IIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAA 120
VF + + ++ WT++I V+N EAL+ F M++ G +A+T+ S++ A
Sbjct: 186 DVFKKFKAGELELNVVTWTSIIASCVQNGKDMEALELFRDMQADGVEPNAVTIPSLIPAC 245
Query: 121 AMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVV 180
GK +H F ++ G + D YV SAL+DMY CG + FDEMP+ R++V
Sbjct: 246 GNISALTHGKEIHCFSLRKG-IFDDVYVGSALIDMYANCGRIRLSQNCFDEMPF--RNLV 302
Query: 181 CWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
W+ +++GY K ++ I +F ML P+ T TSVLSAC +G ++G
Sbjct: 303 SWNSIMSGYAMHGKAKETIEMFHMMLQSGQKPDSITFTSVLSACTQNGLTEEG 355
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 123/256 (48%), Gaps = 39/256 (15%)
Query: 41 DLDRFAGNALISAFANSGFIGSA----CQVFDESSVKDIIAWTALINGYVKNDLPSEALK 96
D D +A+I+ ++ G + A C++ E ++++W +I G+ L EA++
Sbjct: 26 DRDVIVWSAMIAGYSRLGNVDRAKEVFCEMRKEGVEPNLVSWNGMIAGFGNVGLYDEAVR 85
Query: 97 CFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMY 156
F +M S G D TV VL D GK VHG+ ++ G ++ D YV SAL+DMY
Sbjct: 86 LFHEMVSEGFLPDGSTVSCVLPGVGNLEDVLMGKQVHGYVIKLG-LESDKYVVSALLDMY 144
Query: 157 FKCGHCDDACKVFDEMPYS---------------------------------YRDVVCWS 183
+CG + +VFDE+ + +VV W+
Sbjct: 145 GRCGCAPEMSRVFDEIDQTEIGSLNAFLTGLSRNGLVDTALDVFKKFKAGELELNVVTWT 204
Query: 184 VLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECK 243
++A VQ K +A+ +F +M +D V PN T+ S++ AC + AL GK +H + +
Sbjct: 205 SIIASCVQNGKDMEALELFRDMQADGVEPNAVTIPSLIPACGNISALTHGKEIHCF-SLR 263
Query: 244 KVSLNSVELGTALVDM 259
K + V +G+AL+DM
Sbjct: 264 KGIFDDVYVGSALIDM 279
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 85/188 (45%), Gaps = 2/188 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M+ GVEP+ T P L+ + I+ + G D + G+ALI +AN G
Sbjct: 226 MQADGVEPNAVTIPSLIPACGNISALTHGKEIHCFSLRKGIFDDVYVGSALIDMYANCGR 285
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
I + FDE +++++W ++++GY + E ++ F M +G D++T SVL A
Sbjct: 286 IRLSQNCFDEMPFRNLVSWNSIMSGYAMHGKAKETIEMFHMMLQSGQKPDSITFTSVLSA 345
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
G G + V+ ++ ++ + + G ++A + EMP+ D
Sbjct: 346 CTQNGLTEEGWHYFNSMSKEYDVKPKMEHYACMVTLLSRVGKLEEAYSIIKEMPFE-PDA 404
Query: 180 VCWSVLVA 187
W L++
Sbjct: 405 CVWGALLS 412
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 150 SALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDN 209
S+L+ MY KC DDA K+FD M RDV+ WS ++AGY + A VF M +
Sbjct: 2 SSLVHMYLKCNRIDDAQKLFDGM--CDRDVIVWSAMIAGYSRLGNVDRAKEVFCEMRKEG 59
Query: 210 VVPNEFTLTSVLSACAHSGALDQG-KLVHQYI 240
V PN + +++ + G D+ +L H+ +
Sbjct: 60 VEPNLVSWNGMIAGFGNVGLYDEAVRLFHEMV 91
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 68/123 (55%), Gaps = 5/123 (4%)
Query: 140 GRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYS--YRDVVCWSVLVAGYVQCNKFQD 197
G D VWSA++ Y + G+ D A +VF EM ++V W+ ++AG+ + +
Sbjct: 23 GMCDRDVIVWSAMIAGYSRLGNVDRAKEVFCEMRKEGVEPNLVSWNGMIAGFGNVGLYDE 82
Query: 198 AIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVE-LGTAL 256
A+R+F M+S+ +P+ T++ VL + + GK VH Y+ K+ L S + + +AL
Sbjct: 83 AVRLFHEMVSEGFLPDGSTVSCVLPGVGNLEDVLMGKQVHGYV--IKLGLESDKYVVSAL 140
Query: 257 VDM 259
+DM
Sbjct: 141 LDM 143
>Medtr5g098860.1 | PPR containing plant-like protein | HC |
chr5:43289378-43292142 | 20130731
Length = 828
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 116/211 (54%), Gaps = 3/211 (1%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTG 107
NA++ ++ + ++ +VFD+ +D ++W +I+ +V+N EAL +M+
Sbjct: 364 NAVMVMYSRCNHVDTSLKVFDKMLERDAVSWNTIISAFVQNGFDEEALMLVCEMQKQKFL 423
Query: 108 VDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACK 167
+D++T ++L AA+ + GK H + ++ G +Q +G + S L+DMY K G A
Sbjct: 424 IDSVTATALLSAASNLRNLYVGKQTHAYLIRRG-IQFEG-MESYLIDMYAKSGSIRTAEL 481
Query: 168 VFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHS 227
+F++ S RD W+ ++AGY Q + AI + ML NV+PN TL S+L AC+
Sbjct: 482 LFEQNCSSDRDQATWNAIIAGYTQNGLNEKAILLLKQMLVQNVIPNAVTLASILPACSSM 541
Query: 228 GALDQGKLVHQYIECKKVSLNSVELGTALVD 258
G++ + +H + ++ +V +GT+L D
Sbjct: 542 GSMGLARQLHGF-SIRRFLEKNVYVGTSLTD 571
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 126/253 (49%), Gaps = 17/253 (6%)
Query: 13 FPLLLKMFSKPVVEDPFMIYAQIFKLG--FDLDRFAGNALISAFANSGFIGSACQVFDES 70
FP L K+ V+ M Y + K G + D F ++ I F++ G + A VFD
Sbjct: 228 FPALSKLGDSRTVK---MFYGFMRKFGDQYVSDVFVVSSAILMFSDVGCMDYARMVFDRC 284
Query: 71 SVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGV-DALTVVSVLRAAAMAGDDNFG 129
K+ W +I YV+N+ P EA+ F++ + GV D +T++SVL A +
Sbjct: 285 LNKNTEIWNTMIVAYVQNNCPVEAIDVFIQALESEEGVCDDVTLLSVLTAVSQLQQIKLA 344
Query: 130 KWVHGFYVQAGRVQLDG---YVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLV 186
+ H F +++ L G + +A+M MY +C H D + KVFD+M RD V W+ ++
Sbjct: 345 EQFHAFVIKS----LPGSLIIILNAVMVMYSRCNHVDTSLKVFDKM--LERDAVSWNTII 398
Query: 187 AGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVS 246
+ +VQ ++A+ + M + + T T++LSA ++ L GK H Y+ + +
Sbjct: 399 SAFVQNGFDEEALMLVCEMQKQKFLIDSVTATALLSAASNLRNLYVGKQTHAYLIRRGIQ 458
Query: 247 LNSVELGTALVDM 259
+E + L+DM
Sbjct: 459 FEGME--SYLIDM 469
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 104/194 (53%), Gaps = 5/194 (2%)
Query: 50 LISAFANSGFIGSACQVFDE--SSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTG 107
LI +A SG I +A +F++ SS +D W A+I GY +N L +A+ +M
Sbjct: 466 LIDMYAKSGSIRTAELLFEQNCSSDRDQATWNAIIAGYTQNGLNEKAILLLKQMLVQNVI 525
Query: 108 VDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACK 167
+A+T+ S+L A + G + +HGF ++ ++ + YV ++L D Y KCG A
Sbjct: 526 PNAVTLASILPACSSMGSMGLARQLHGFSIRRF-LEKNVYVGTSLTDTYSKCGAISYAEN 584
Query: 168 VFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHS 227
VF P ++ V ++ ++ Y Q + A+ ++ +ML + P+ T ++LSAC +S
Sbjct: 585 VFLRTPE--KNSVTYTTMMMCYGQHGMGKRALTLYDSMLRSGIRPDAVTFVAILSACNYS 642
Query: 228 GALDQGKLVHQYIE 241
G +D+G + + +E
Sbjct: 643 GLVDEGLQIFESME 656
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 94/183 (51%), Gaps = 8/183 (4%)
Query: 51 ISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGT--GV 108
+S G A + D + W ++I G++ N+LP +AL + KMRS +
Sbjct: 56 LSKLCREGQPHLALHLLDSLPRPSTVVWNSVIIGFICNNLPHQALLLYAKMRSNSSCSTF 115
Query: 109 DALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDG---YVWSALMDMYFKCGHCDDA 165
D T S L+A A+ D GK +H ++++ G V+++L++MY C H + A
Sbjct: 116 DPYTFSSTLKACALTKDILTGKAIHSHFLRSHSNTNTGPSRIVYNSLLNMYASCQH-EYA 174
Query: 166 CKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACA 225
VFD M R+VV W+ L+ +V+ N++ A+ F NM++ +V+P+ T ++ A +
Sbjct: 175 LNVFDVM--RRRNVVAWNTLILSFVKMNRYPQAVEAFANMINQSVMPSPVTFVNLFPALS 232
Query: 226 HSG 228
G
Sbjct: 233 KLG 235
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 97/198 (48%), Gaps = 8/198 (4%)
Query: 44 RFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRS 103
R N+L++ +A+ A VFD ++++AW LI +VK + +A++ F M +
Sbjct: 156 RIVYNSLLNMYASCQH-EYALNVFDVMRRRNVVAWNTLILSFVKMNRYPQAVEAFANMIN 214
Query: 104 TGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQL-DGYVWSALMDMYFKCGHC 162
+T V++ A + GD K +GF + G + D +V S+ + M+ G
Sbjct: 215 QSVMPSPVTFVNLFPALSKLGDSRTVKMFYGFMRKFGDQYVSDVFVVSSAILMFSDVGCM 274
Query: 163 DDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNML-SDNVVPNEFTLTSVL 221
D A VFD ++ W+ ++ YVQ N +AI VF L S+ V ++ TL SVL
Sbjct: 275 DYARMVFDRCLNKNTEI--WNTMIVAYVQNNCPVEAIDVFIQALESEEGVCDDVTLLSVL 332
Query: 222 SACAHSGALDQGKLVHQY 239
+A + L Q KL Q+
Sbjct: 333 TAVSQ---LQQIKLAEQF 347
>Medtr4g031160.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:10600555-10597860 | 20130731
Length = 839
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 126/233 (54%), Gaps = 6/233 (2%)
Query: 3 QKGVEPDQHTFPLLLKM-FSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIG 61
Q GV P+ TF +LK S P + ++ Q KLG GN L+S +A SG +
Sbjct: 359 QGGVAPNCFTFSGVLKACASLPDFDFGEQVHGQTIKLGLSAIDCVGNGLVSVYAKSGRME 418
Query: 62 SACQVFDESSVKDIIAWTALINGYVKN-DLPSEALKCFVKMRSTGTGVDALTVVSVLRAA 120
SA + FD K++++ T + + VK+ +L SE ++ G+GV + T S+L A
Sbjct: 419 SARKCFDVLFEKNLVSETVVDDTNVKDFNLNSEQ-DLDREVEYVGSGVSSFTYASLLSGA 477
Query: 121 AMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVV 180
A G G+ +H V+ G + D V +AL+ MY KCG+ + A +VF++M +V+
Sbjct: 478 ACIGTIGKGEQIHAMVVKIG-FRTDLSVNNALISMYSKCGNKEAALQVFNDMEDC--NVI 534
Query: 181 CWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
W+ ++ G+ + A+ +F+NML V PN+ T +VLSAC+H G +D+
Sbjct: 535 TWTSIINGFAKHGFASKALELFYNMLETGVKPNDVTYIAVLSACSHVGLIDEA 587
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 121/237 (51%), Gaps = 10/237 (4%)
Query: 30 MIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFD--ESSVKDIIAWTALINGYVK 87
+++ ++ LD N+LI+ ++ S +A +F E+S +D+++++++I+ +
Sbjct: 73 LLHHKLTTSNLPLDTLLLNSLITLYSKSNDPITAFSIFQSMENSKRDVVSYSSIISCFAN 132
Query: 88 NDLPSEALKCFVKMR-STGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDG 146
N +A++ F ++ G + +V+RA G G + GF ++ G
Sbjct: 133 NRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIRACLKGGFFKTGLCLFGFVLKTGYFDSHV 192
Query: 147 YVWSALMDMYFK-CGHCD--DACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFW 203
V L+DM+ K C D A KVFD+M ++VV W++++ Q +AI +F
Sbjct: 193 CVGCELIDMFVKGCSLADLESARKVFDKM--REKNVVTWTLMITRLAQYGYNDEAIDLFL 250
Query: 204 NML-SDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
ML S VP+ FTLT ++S CA L GK +H ++ + L+ + +G +LVDM
Sbjct: 251 EMLVSSGYVPDRFTLTGLISVCAEIQFLSLGKELHSWVIRSGLVLD-LCVGCSLVDM 306
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 118/247 (47%), Gaps = 21/247 (8%)
Query: 5 GVEPDQHTFPLLLKMFSKPVVEDPFM-----IYAQIFKLGFDLDRFAGNALISAFANSGF 59
G PD+ T L+ + E F+ +++ + + G LD G +L+ +A G
Sbjct: 257 GYVPDRFTLTGLISV----CAEIQFLSLGKELHSWVIRSGLVLDLCVGCSLVDMYAKCGL 312
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVK--NDLPSEALKCFVKM-RSTGTGVDALTVVSV 116
+ A +VFD ++++WTAL+NGYV+ EA++ F M G + T V
Sbjct: 313 VQEARKVFDGMREHNVMSWTALVNGYVRGGGGYEREAMRMFSNMLLQGGVAPNCFTFSGV 372
Query: 117 LRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSY 176
L+A A D +FG+ VHG ++ G +D V + L+ +Y K G + A K FD +
Sbjct: 373 LKACASLPDFDFGEQVHGQTIKLGLSAID-CVGNGLVSVYAKSGRMESARKCFDVL--FE 429
Query: 177 RDVVCWSVLVAGYVQ---CNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
+++V +V+ V+ N QD R + S + FT S+LS A G + +G
Sbjct: 430 KNLVSETVVDDTNVKDFNLNSEQDLDREVEYVGSG---VSSFTYASLLSGAACIGTIGKG 486
Query: 234 KLVHQYI 240
+ +H +
Sbjct: 487 EQIHAMV 493
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 82/159 (51%), Gaps = 5/159 (3%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
I+A + K+GF D NALIS ++ G +A QVF++ ++I WT++ING+ K+
Sbjct: 489 IHAMVVKIGFRTDLSVNNALISMYSKCGNKEAALQVFNDMEDCNVITWTSIINGFAKHGF 548
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAG-DDNFGKWVHGFYVQAGRV-QLDGYV 148
S+AL+ F M TG + +T ++VL A + G D K G V +++ Y
Sbjct: 549 ASKALELFYNMLETGVKPNDVTYIAVLSACSHVGLIDEAWKHFTSMRDNHGIVPRMEHY- 607
Query: 149 WSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVA 187
+ ++D+ + G +A + + MP+ D + W +
Sbjct: 608 -ACMVDLLGRSGLLSEAIEFINSMPFD-ADALVWRTFLG 644
>Medtr1g059280.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:21515828-21518970 | 20130731
Length = 616
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 130/240 (54%), Gaps = 15/240 (6%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPFM----IYAQIFKLGFDLDRFAGNALISAFAN 56
M + G EP++ TF +L + + F+ I++ I KL ++ F G++L+ +A
Sbjct: 132 MLRSGTEPNEFTFATVLTSCTSSL---GFILGRQIHSLIIKLNYEDHVFVGSSLLDMYAK 188
Query: 57 SGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSV 116
G I A VF+ +D+++ TA+I+GY + L EAL+ F +++ G + +T V
Sbjct: 189 DGKIHEARTVFECLPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVTYTGV 248
Query: 117 LRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYV--WSALMDMYFKCGHCDDACKVFDEMPY 174
L A + + GK VH + R ++ +V ++L+DMY KCG+ + ++FD M
Sbjct: 249 LTALSGLAALDLGKQVHNHVL---RSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTM-- 303
Query: 175 SYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDN-VVPNEFTLTSVLSACAHSGALDQG 233
R V+ W+ ++ GY + + ++ +++F M + V P+ T+ +VLS C+H G D+G
Sbjct: 304 YERTVISWNAMLVGYSKHGEGREVLKLFTLMREETKVKPDSVTILAVLSGCSHGGLEDKG 363
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 120/229 (52%), Gaps = 4/229 (1%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
++A + K + F LI + +G A VFDE +++++WTA+I+ Y +
Sbjct: 62 VHAHMIKTRYLPSVFLRTRLIVLYTKCDSLGDAHNVFDEMPERNVVSWTAMISAYSQRGY 121
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
S+AL F++M +GT + T +VL + + G+ +H ++ + +V S
Sbjct: 122 ASQALNLFLQMLRSGTEPNEFTFATVLTSCTSSLGFILGRQIHSLIIKLN-YEDHVFVGS 180
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV 210
+L+DMY K G +A VF+ +P RDVV + +++GY Q ++A+ +F + + +
Sbjct: 181 SLLDMYAKDGKIHEARTVFECLP--ERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGM 238
Query: 211 VPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
N T T VL+A + ALD GK VH ++ ++ + V L +L+DM
Sbjct: 239 KSNYVTYTGVLTALSGLAALDLGKQVHNHVLRSEIP-SFVVLQNSLIDM 286
>Medtr4g095065.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:39629093-39627012 | 20130731
Length = 626
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 129/268 (48%), Gaps = 41/268 (15%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFI 60
M ++P+ TF LL + ++ I+ + K G D + L+ +A G
Sbjct: 113 MLTHRIQPNAFTFSSLL---NGSTIQPIKSIHCHVIKFGLCSDTYVATGLVDGYARGGDF 169
Query: 61 GSACQVFD---ESSV-----------------------------KDIIAWTALINGYVKN 88
SA ++FD E S+ +D++ W +I+GY +N
Sbjct: 170 ISAEKLFDKMPEKSLISFTTMLMCYAKHGKLLEARLLFDGMEGNRDVVVWNVMIDGYAQN 229
Query: 89 DLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGR---VQLD 145
P+E L F +M + +T++ VL + G G+WVH Y++ G+ V ++
Sbjct: 230 GFPNECLLLFRRMLVEKVKPNVITLLPVLSSCGQVGALESGRWVHS-YIKNGKDGVVGVE 288
Query: 146 GYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNM 205
V +AL+DMY KCG +DA KVFD++ +DVV W+ ++ GY ++A+++F M
Sbjct: 289 VRVGTALVDMYCKCGSLEDARKVFDKI--DGKDVVAWNSMIMGYAVNGLSEEALKLFHEM 346
Query: 206 LSDNVVPNEFTLTSVLSACAHSGALDQG 233
+ V P+ T ++L+AC HSG + +G
Sbjct: 347 HGEGVRPSYVTFIALLTACGHSGLVTKG 374
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 120/263 (45%), Gaps = 37/263 (14%)
Query: 29 FMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKN 88
I+A + + D L +++ G + + +F+ + +D+ WT++I+ + ++
Sbjct: 41 LQIHASLVRRNLDDHTILNFKLQRRYSSLGHLNYSVTLFNRTRNRDVYTWTSIIHAHTQS 100
Query: 89 DLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYV 148
L +AL + +M + +A T S+L + + K +H ++ G D YV
Sbjct: 101 KLNDQALSYYAQMLTHRIQPNAFTFSSLLNGSTIQPI----KSIHCHVIKFGLCS-DTYV 155
Query: 149 WSALMDMYFKCGHCDDACKVFDEMPYSY------------------------------RD 178
+ L+D Y + G A K+FD+MP RD
Sbjct: 156 ATGLVDGYARGGDFISAEKLFDKMPEKSLISFTTMLMCYAKHGKLLEARLLFDGMEGNRD 215
Query: 179 VVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQ 238
VV W+V++ GY Q + + +F ML + V PN TL VLS+C GAL+ G+ VH
Sbjct: 216 VVVWNVMIDGYAQNGFPNECLLLFRRMLVEKVKPNVITLLPVLSSCGQVGALESGRWVHS 275
Query: 239 YIECKK--VSLNSVELGTALVDM 259
YI+ K V V +GTALVDM
Sbjct: 276 YIKNGKDGVVGVEVRVGTALVDM 298
>Medtr3g084440.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:38114703-38117150 | 20130731
Length = 616
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 112/201 (55%), Gaps = 4/201 (1%)
Query: 35 IFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEA 94
+F F+L + A+IS +A SG A ++F ES K++ AWTALI+G V++ ++A
Sbjct: 168 VFDSIFELSSISWTAMISGYARSGRKLEALELFRESPFKNLYAWTALISGLVQSGNANDA 227
Query: 95 LKCFVKMRSTGTGV-DALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALM 153
L FV+MR G + D L + SV+ A A + GK VH + G + ++ +AL+
Sbjct: 228 LYLFVEMRREGVSIADPLVLSSVVGACANSAVRELGKQVHCVVITLG-YESCLFISNALV 286
Query: 154 DMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPN 213
DMY KC A +F EM +DVV W+ ++ G Q ++A+ ++ +M+ V PN
Sbjct: 287 DMYAKCSDVVAAKYIFCEM--RRKDVVSWTSIIVGTAQHGLAEEALTLYDDMVLAGVKPN 344
Query: 214 EFTLTSVLSACAHSGALDQGK 234
E T ++ AC+H G + +G+
Sbjct: 345 EVTFVGLIYACSHVGLVSKGR 365
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 125/273 (45%), Gaps = 45/273 (16%)
Query: 26 EDPFM---IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALI 82
++PF+ ++AQI K G + LI A+ G + A ++FD +D +AW ++
Sbjct: 22 KNPFIAKKLHAQIIKSGLNHHHPFPKTLIDAYGKCGLLKDALKLFDALPQQDHVAWATVL 81
Query: 83 NGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDN--FGKWVHGFYVQA- 139
+ ++LP +A + + G D S+++A A G + GK +H ++ +
Sbjct: 82 SACNLSNLPHKAFSISLPILHEGLQPDHFVFSSLIKACANLGSVHVKLGKQLHARFLLSP 141
Query: 140 -----------------------GRV------QLDGYVWSALMDMYFKCGHCDDACKVFD 170
GR +L W+A++ Y + G +A ++F
Sbjct: 142 FFEDDVVKSSLVDMYAKFELPDYGRAVFDSIFELSSISWTAMISGYARSGRKLEALELFR 201
Query: 171 EMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV-VPNEFTLTSVLSACAHSGA 229
E P ++++ W+ L++G VQ DA+ +F M + V + + L+SV+ ACA+S
Sbjct: 202 ESP--FKNLYAWTALISGLVQSGNANDALYLFVEMRREGVSIADPLVLSSVVGACANSAV 259
Query: 230 LDQGKLVHQYIECKKVSL---NSVELGTALVDM 259
+ GK VH C ++L + + + ALVDM
Sbjct: 260 RELGKQVH----CVVITLGYESCLFISNALVDM 288
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 104/216 (48%), Gaps = 4/216 (1%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
++ + LG++ F NAL+ +A + +A +F E KD+++WT++I G ++ L
Sbjct: 266 VHCVVITLGYESCLFISNALVDMYAKCSDVVAAKYIFCEMRRKDVVSWTSIIVGTAQHGL 325
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
EAL + M G + +T V ++ A + G + G+ + V+ ++ ++
Sbjct: 326 AEEALTLYDDMVLAGVKPNEVTFVGLIYACSHVGLVSKGRALFKSMVEDFGIRPSLQHYT 385
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV 210
L+D++ + GH D+A + MP D W+ L++ + A+R+ ++L
Sbjct: 386 CLLDLFSRSGHLDEAENLIRTMPVK-PDEPTWAALLSACKHHGNTKMAVRIADHLLDLKP 444
Query: 211 V-PNEFTLTSVLSACAHSGALDQGKLVHQYIECKKV 245
P+ + L S + A A G + +V + + K+V
Sbjct: 445 EDPSSYILLSNIYAGA--GMWENVSMVRKLMAVKEV 478
>Medtr8g066670.1 | chlororespiratory reduction protein, putative |
LC | chr8:27704772-27714873 | 20130731
Length = 1504
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 124/234 (52%), Gaps = 8/234 (3%)
Query: 31 IYAQIFKLG--FDLDRFAGNALISAFANSGFIGSACQVF-DESSVKDIIAWTALINGYVK 87
I+A + K G + + F + L+ +A A F + +++ ++ A++ +
Sbjct: 125 IHAHLIKKGSSYSTNEFVESKLVILYAKCNLTRVAVHFFRNVVKNQNLFSYAAIVGLQAR 184
Query: 88 NDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDG- 146
N L EAL +V+M G D V + L+A FG+ +HGF V+ G + DG
Sbjct: 185 NGLYKEALLSYVEMMEKGFCPDNFVVPNGLKACGGLRWIGFGRGIHGFVVKMGN-EFDGC 243
Query: 147 -YVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNM 205
YV ++L+DMY KCG +DA KVFDEMP R+ V W+ ++ GYVQ +A+ +F M
Sbjct: 244 VYVATSLVDMYGKCGVLEDAEKVFDEMPNRKRNDVVWNSMIVGYVQNGMNVEAVGLFEKM 303
Query: 206 -LSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVD 258
V P+E +L+ SACA+ A+++GK H + LN V LG+++++
Sbjct: 304 RFEGGVEPSEVSLSGFFSACANLEAVEEGKQGHALVILMGFELNYV-LGSSIMN 356
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 110/200 (55%), Gaps = 7/200 (3%)
Query: 48 NALISAFANSGFIGSACQVFDESSVK----DIIAWTALINGYVKNDLPSEALKCFVKMRS 103
N+LI F +G + A +F E + ++I WT +I+G +N L EA + F +M+
Sbjct: 522 NSLIFGFFRNGQVVEAQDMFSEMQLSGVTPNLITWTTMISGLAQNGLGYEASRVFQQMQG 581
Query: 104 TGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCD 163
G +++++ S L A N+G+ +HG YV + + ++++DMY KCG+ D
Sbjct: 582 AGMRPNSISITSALSACTNMALLNYGRSIHG-YVMRNFMSFSLQITTSIIDMYAKCGNLD 640
Query: 164 DACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSA 223
DA VF + S +++ ++ +++ Y K +A+ +F ++ ++P+ T TSVLSA
Sbjct: 641 DAKFVF--IICSTKELPVYNAMISAYASHGKSAEALALFQELVKQGIMPDHITFTSVLSA 698
Query: 224 CAHSGALDQGKLVHQYIECK 243
C+H L +G + +Y+ C+
Sbjct: 699 CSHGRLLKEGLELFKYMVCE 718
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 126/260 (48%), Gaps = 11/260 (4%)
Query: 3 QKGVEPDQHTFPLLLKMFSK----PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSG 58
+ GVEP + + L FS VE+ +A + +GF+L+ G+++++ ++ G
Sbjct: 306 EGGVEPSEVS---LSGFFSACANLEAVEEGKQGHALVILMGFELNYVLGSSIMNFYSKVG 362
Query: 59 FIGSACQVFDESSV-KDIIAWTALINGYVKNDLPSEALK-CFVKMRSTGTGVDALTVVSV 116
I VF +V KD + W +I+ YV+ + +AL+ C D +T+ S+
Sbjct: 363 LIEEVELVFRSMAVLKDEVTWNLMISSYVQFGMFEKALEMCHWMREEENLRFDCVTLSSL 422
Query: 117 LRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSY 176
L AA D GK +HGF ++ D V S ++DMY KCG D A VF
Sbjct: 423 LALAADTRDVKLGKKLHGFCIR-NEFYSDMAVLSGVLDMYAKCGIMDCARGVF-HFAGKK 480
Query: 177 RDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLV 236
+D+V W+ ++A + +A+++F+ M ++V PN + S++ +G + + + +
Sbjct: 481 KDIVLWNTMLAACAEKGLSGEALKLFFQMQMESVPPNVVSWNSLIFGFFRNGQVVEAQDM 540
Query: 237 HQYIECKKVSLNSVELGTAL 256
++ V+ N + T +
Sbjct: 541 FSEMQLSGVTPNLITWTTMI 560
>Medtr3g111500.1 | PPR containing plant-like protein | HC |
chr3:52097450-52094882 | 20130731
Length = 524
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 132/295 (44%), Gaps = 41/295 (13%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFI 60
M + P+ HTF L+K S + ++ K G D + +++I+ F+ G I
Sbjct: 99 MLNMNIRPNSHTFTTLVK--SCVTLSSLEQVFTLTMKSGNSSDVYFVSSVINVFSKHGAI 156
Query: 61 GSACQVFDESSVKDIIAWT-------------------------------ALINGYVKND 89
A QVFDESS ++++ WT A+++GYV+N
Sbjct: 157 HLARQVFDESSNRNVVCWTSLVSGYCSCGLVNEVRDVFDKMPQRNEASNSAMVSGYVRNS 216
Query: 90 LPSEALKCFVKMRSTGTG-----VDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQL 144
SE ++ F +++ G + +VSVL A + G GKW+H YV+ ++
Sbjct: 217 FFSEGVQLFRELKKKDKGRARVKFNGALLVSVLNACTVMGAFEEGKWIHS-YVEENGLEY 275
Query: 145 DGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWN 204
D + +AL+D Y KCG DA KVFD+M +DV WS ++ G + A+ +F
Sbjct: 276 DLELGTALIDFYAKCGWVKDAEKVFDKMLV--KDVATWSAMILGLAINGNNKMALELFEK 333
Query: 205 MLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
M PNE T VL+AC H + + + K S+E +VD+
Sbjct: 334 MEKVGPKPNEVTFVGVLTACNHKSLFGESSRLFGIMSEKYNITPSIEHYGCIVDI 388
>Medtr5g023040.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:9142979-9147043 | 20130731
Length = 878
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 102/186 (54%), Gaps = 3/186 (1%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTG 107
N +IS +A +G + A ++F+ V+++I+W +LI G+++N L +ALK V M G
Sbjct: 394 NTMISGYAQAGEMDRATEIFEAMGVRNVISWNSLITGFLQNGLYLDALKSLVLMGQEGKK 453
Query: 108 VDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACK 167
D T L + A GK +H +++G + D +V +AL+ MY KCG A K
Sbjct: 454 PDQSTFACSLSSCANLAALQVGKQLHELILKSGYIN-DLFVSNALIAMYAKCGGVQSAEK 512
Query: 168 VFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHS 227
VF ++ D++ W+ L++GY +A F M S+ VP+E T +LSAC+H+
Sbjct: 513 VFKDIEGV--DLISWNSLISGYALNGYANEAFWAFEQMSSEGTVPDEVTFIGMLSACSHA 570
Query: 228 GALDQG 233
G +QG
Sbjct: 571 GLTNQG 576
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 89/177 (50%), Gaps = 10/177 (5%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTG 107
N++++ FA +G + A Q+FD+ S +++++W +I GY+ N++ EA K F M
Sbjct: 52 NSMVTVFAKNGRVSDARQLFDKMSQRNLVSWNTMIAGYLHNNMVEEAHKLFDLMAERDNF 111
Query: 108 VDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACK 167
AL + R + + V +LD W+A++ Y K G DDA K
Sbjct: 112 SWALMITCYTRKGMLEKARELFELVPD--------KLDTACWNAMIAGYAKKGRFDDAEK 163
Query: 168 VFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSAC 224
VF++MP +D+V ++ ++AGY Q K A++ F M NVV + ++ C
Sbjct: 164 VFEKMP--VKDLVSYNSMLAGYTQNGKMGLAMKFFERMAERNVVSWNLMVAGFVNNC 218
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 108/235 (45%), Gaps = 27/235 (11%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTG 107
NA+I+A+ I A ++F E+ KD ++WT +INGYV+ EA + + +M
Sbjct: 270 NAMIAAYVQDLQIDEAVKLFKETPYKDCVSWTTMINGYVRVGKLDEAREVYNQMPYKDVA 329
Query: 108 VDALTVVSVLRAAAMAGDDN------------FGKWVHGFYVQAGRVQ-----------L 144
+ +++ + + + G Y Q+GR+
Sbjct: 330 AKTALMSGLIQNGRIDEASQVFSQLNKRDAICWNSMIAG-YCQSGRMSEALNLFRQMPVK 388
Query: 145 DGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWN 204
+ W+ ++ Y + G D A ++F+ M R+V+ W+ L+ G++Q + DA++
Sbjct: 389 NAVSWNTMISGYAQAGEMDRATEIFEAM--GVRNVISWNSLITGFLQNGLYLDALKSLVL 446
Query: 205 MLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
M + P++ T LS+CA+ AL GK +H+ I K +N + + AL+ M
Sbjct: 447 MGQEGKKPDQSTFACSLSSCANLAALQVGKQLHELI-LKSGYINDLFVSNALIAM 500
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 95/194 (48%), Gaps = 1/194 (0%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M Q+G +PDQ TF L + ++ ++ I K G+ D F NALI+ +A G
Sbjct: 447 MGQEGKKPDQSTFACSLSSCANLAALQVGKQLHELILKSGYINDLFVSNALIAMYAKCGG 506
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ SA +VF + D+I+W +LI+GY N +EA F +M S GT D +T + +L A
Sbjct: 507 VQSAEKVFKDIEGVDLISWNSLISGYALNGYANEAFWAFEQMSSEGTVPDEVTFIGMLSA 566
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
+ AG N G + ++ ++ +S L+D+ + G ++A + M
Sbjct: 567 CSHAGLTNQGVDLFKCMIEGFAIEPLAEHYSCLVDLLGRMGRLEEAFNIVRGMKVKANAG 626
Query: 180 VCWSVLVAGYVQCN 193
+ S+L A V N
Sbjct: 627 LWGSLLAACRVHKN 640
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 116/253 (45%), Gaps = 32/253 (12%)
Query: 7 EPDQHTFPLLLKMFSKPVVEDPFMIYAQIFKLGFD-LDRFAGNALISAFANSGFIGSACQ 65
E D ++ L++ +++ + + ++F+L D LD NA+I+ +A G A +
Sbjct: 107 ERDNFSWALMITCYTRKGMLEK---ARELFELVPDKLDTACWNAMIAGYAKKGRFDDAEK 163
Query: 66 VFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAG- 124
VF++ VKD++++ +++ GY +N A+K F +M L V + +
Sbjct: 164 VFEKMPVKDLVSYNSMLAGYTQNGKMGLAMKFFERMAERNVVSWNLMVAGFVNNCDLGSA 223
Query: 125 --------DDNFGKWV--------HGFYVQA----GRVQLDGYV-WSALMDMYFKCGHCD 163
D N WV HG V+A R+ V W+A++ Y + D
Sbjct: 224 WELFEKIPDPNAVSWVTMLCGFARHGKIVEARKLFDRMPCKNVVSWNAMIAAYVQDLQID 283
Query: 164 DACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSA 223
+A K+F E P Y+D V W+ ++ GYV+ K +A V+ M +V T+++S
Sbjct: 284 EAVKLFKETP--YKDCVSWTTMINGYVRVGKLDEAREVYNQMPYKDVAAK----TALMSG 337
Query: 224 CAHSGALDQGKLV 236
+G +D+ V
Sbjct: 338 LIQNGRIDEASQV 350
>Medtr8g063290.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:26513420-26510735 | 20130731
Length = 659
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 99/171 (57%), Gaps = 3/171 (1%)
Query: 65 QVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAG 124
++F K++I+W +I Y+KN LP++A+ +++M DA+T SVL A
Sbjct: 243 KIFVNLERKNLISWNVMIRVYMKNSLPTQAVDLYLQMEKCRVEPDAITFASVLPACGDLS 302
Query: 125 DDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSV 184
G+ +H YV+ ++ + + ++L+DMY +CG DDA +VFD M +RDV W+
Sbjct: 303 ALLLGRRIHE-YVEKKKLCPNLLLENSLIDMYARCGCLDDAKRVFDRM--KFRDVASWTS 359
Query: 185 LVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKL 235
L++ Y + +A+ +F ML+ P+ ++LSAC+HSG LD+G++
Sbjct: 360 LISAYGMTGQGCNAVALFTEMLNSGQAPDSIAFVAILSACSHSGLLDEGRI 410
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 120/260 (46%), Gaps = 38/260 (14%)
Query: 1 MRQKGVEPDQHTFPLLLKMFS-KPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M G PD +T+P +LK S + +I+ + K+G D + F GN LI+ + G
Sbjct: 110 MVNGGFRPDNYTYPCVLKACSCSENLRYGLLIHGDVLKVGLDFNLFVGNGLIAMYGKCGC 169
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ A +VFDE KD+++W +++ GY N +AL+ +M G D T+ S++ A
Sbjct: 170 LFEARRVFDEMIWKDVVSWNSMVAGYAHNMRFDDALEICREMEDYGQKPDGCTMASLMPA 229
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
A +N YV+ V L+ +++
Sbjct: 230 VANTSSENV------LYVEKIFVNLE------------------------------RKNL 253
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQY 239
+ W+V++ Y++ + A+ ++ M V P+ T SVL AC AL G+ +H+Y
Sbjct: 254 ISWNVMIRVYMKNSLPTQAVDLYLQMEKCRVEPDAITFASVLPACGDLSALLLGRRIHEY 313
Query: 240 IECKKVSLNSVELGTALVDM 259
+E KK+ N + L +L+DM
Sbjct: 314 VEKKKLCPNLL-LENSLIDM 332
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 114/219 (52%), Gaps = 4/219 (1%)
Query: 12 TFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDES 70
+F LL K + P ++ ++ IF L + G L+ ++A G G +VFDE
Sbjct: 20 SFGLLAKALDQNPDIKTLKKLHTMIFYLNSHQNPSLGIKLMRSYAACGEPGLTRKVFDEM 79
Query: 71 SVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGK 130
S ++++ + +I YV N + L F +M + G D T VL+A + + + +G
Sbjct: 80 SDRNVVFYNVMIRSYVNNHRYDDGLLVFREMVNGGFRPDNYTYPCVLKACSCSENLRYGL 139
Query: 131 WVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYV 190
+HG ++ G + + +V + L+ MY KCG +A +VFDEM ++DVV W+ +VAGY
Sbjct: 140 LIHGDVLKVG-LDFNLFVGNGLIAMYGKCGCLFEARRVFDEM--IWKDVVSWNSMVAGYA 196
Query: 191 QCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGA 229
+F DA+ + M P+ T+ S++ A A++ +
Sbjct: 197 HNMRFDDALEICREMEDYGQKPDGCTMASLMPAVANTSS 235
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 95/208 (45%), Gaps = 16/208 (7%)
Query: 1 MRQKGVEPDQHTFPLLLKM---FSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANS 57
M + VEPD TF +L S ++ Y + KL +L N+LI +A
Sbjct: 279 MEKCRVEPDAITFASVLPACGDLSALLLGRRIHEYVEKKKLCPNL--LLENSLIDMYARC 336
Query: 58 GFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVL 117
G + A +VFD +D+ +WT+LI+ Y A+ F +M ++G D++ V++L
Sbjct: 337 GCLDDAKRVFDRMKFRDVASWTSLISAYGMTGQGCNAVALFTEMLNSGQAPDSIAFVAIL 396
Query: 118 RAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYR 177
A + +G + G+ R+ ++ L+D+ + G D+A + +MP
Sbjct: 397 SACSHSGLLDEGRIYFKQMTDDYRITPRIEHYACLVDLLGRAGRVDEAYNIIKQMPIEPN 456
Query: 178 DVVCWSVLVAGYVQCNKFQDAIRVFWNM 205
+ V W+ L++ + RVF NM
Sbjct: 457 ERV-WATLLS----------SCRVFTNM 473
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Query: 152 LMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVV 211
LM Y CG KVFDEM S R+VV ++V++ YV +++ D + VF M++
Sbjct: 59 LMRSYAACGEPGLTRKVFDEM--SDRNVVFYNVMIRSYVNNHRYDDGLLVFREMVNGGFR 116
Query: 212 PNEFTLTSVLSACAHSGALDQGKLVH 237
P+ +T VL AC+ S L G L+H
Sbjct: 117 PDNYTYPCVLKACSCSENLRYGLLIH 142
>Medtr4g083630.1 | PPR containing plant-like protein | HC |
chr4:32536076-32533157 | 20130731
Length = 708
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 109/215 (50%), Gaps = 5/215 (2%)
Query: 45 FAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRST 104
+ N LI ++ G + A +VFD S ++ + WTA+I+GY+K DL EA K F
Sbjct: 186 YVDNNLICSYLRLGKLAQARKVFDGMSRRNTVTWTAIIDGYLKYDLDDEAFKLFHGSIKH 245
Query: 105 GTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDD 164
G ++ V + D GK +H +++ L V SA+++ Y KCG
Sbjct: 246 GVQPNSKMFVCFMNLCCKRVDLALGKQIHARILKSNWRNL--IVDSAVVNFYSKCGKISS 303
Query: 165 ACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSAC 224
A + FD M + RDVVCW+ ++ Q +A+ + ML D PNE+T+ + L AC
Sbjct: 304 AFRTFDRM--AKRDVVCWTTIITACSQHGLGHEALLLLSQMLVDGFFPNEYTICAALKAC 361
Query: 225 AHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
+ A G +H I KK+ + V +GT+L+DM
Sbjct: 362 GENKAFKCGTQLHGAI-VKKICKSDVFIGTSLIDM 395
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 114/245 (46%), Gaps = 10/245 (4%)
Query: 5 GVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSA 63
G P+++T LK + + ++ I K D F G +LI +A G I S+
Sbjct: 346 GFFPNEYTICAALKACGENKAFKCGTQLHGAIVKKICKSDVFIGTSLIDMYAKCGEIVSS 405
Query: 64 CQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMA 123
+VFD V++ WT++I+GY +N EAL F M+ V+ T+V V+ A
Sbjct: 406 KKVFDRMKVRNTATWTSIISGYARNGFGEEALNFFRLMKRKKVYVNKSTLVCVMTACGTI 465
Query: 124 GDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWS 183
G+ VH +++ + + Y+ + L+ Y +C A V +P RDVV W+
Sbjct: 466 KASLIGREVHAQKIKS-VILTNMYIETTLVWFYCRCKDYSHAFNVLKYIP--LRDVVSWT 522
Query: 184 VLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAH------SGALDQGKLVH 237
+++G + +A+ M+ + V+PN +T +S L ACA S L++
Sbjct: 523 AIISGCARLGLETEALEFLREMMEEGVLPNSYTYSSALKACAKLETPALSNVFVNSALIY 582
Query: 238 QYIEC 242
Y +C
Sbjct: 583 MYAKC 587
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 100/205 (48%), Gaps = 20/205 (9%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
++AQ K + + L+ + A V ++D+++WTA+I+G + L
Sbjct: 474 VHAQKIKSVILTNMYIETTLVWFYCRCKDYSHAFNVLKYIPLRDVVSWTAIISGCARLGL 533
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
+EAL+ +M G ++ T S L+A A + +V S
Sbjct: 534 ETEALEFLREMMEEGVLPNSYTYSSALKACAKLETPALS---------------NVFVNS 578
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV 210
AL+ MY KCG+ DA +VFD MP R++V W ++ GY + + A+++ + M ++
Sbjct: 579 ALIYMYAKCGYIADAFQVFDNMPE--RNLVSWKAMILGYARNGHCRKALQLMYRMRAEGF 636
Query: 211 VPNEFTLTSVLSACAHSGALDQGKL 235
V +++ LT+VL+AC G +D G +
Sbjct: 637 VVDDYILTTVLTAC---GGIDSGDI 658
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 63/119 (52%), Gaps = 13/119 (10%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFI 60
M ++GV P+ +T+ LK +K +E P + + F +ALI +A G+I
Sbjct: 544 MMEEGVLPNSYTYSSALKACAK--LETPALS-----------NVFVNSALIYMYAKCGYI 590
Query: 61 GSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
A QVFD +++++W A+I GY +N +AL+ +MR+ G VD + +VL A
Sbjct: 591 ADAFQVFDNMPERNLVSWKAMILGYARNGHCRKALQLMYRMRAEGFVVDDYILTTVLTA 649
>Medtr8g066250.1 | PPR containing plant-like protein | HC |
chr8:27517637-27514893 | 20130731
Length = 728
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 125/254 (49%), Gaps = 14/254 (5%)
Query: 8 PDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQV 66
P+ TFP+++K K V + ++ K GF + F +LI ++ G + A +V
Sbjct: 108 PNCFTFPMIIKSCGKLEGVREGEEVHCCATKHGFKSNSFVATSLIDMYSKKGCVEDAYKV 167
Query: 67 FDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDD 126
F E ++++ WTA+INGY+ + F + ++ + + + MA
Sbjct: 168 FGEMHERNVVVWTAIINGYILCGDVVSGRRLFDLAPERDVVMWSVLISGYIESKNMAAAR 227
Query: 127 NFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLV 186
F R D W+A+++ Y G + KVFDEMP R+V W+ L+
Sbjct: 228 EL------FDKMPNR---DTMSWNAMLNGYAVNGEVEMFEKVFDEMP--ERNVFSWNGLI 276
Query: 187 AGYVQCNKFQDAIRVFWNMLSD-NVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKV 245
GYV+ F + + F ML + +V+PN+FTL +VLSAC+ GALD GK VH Y E
Sbjct: 277 GGYVKNGLFSETLESFKRMLVEGHVIPNDFTLVAVLSACSRLGALDMGKWVHVYAESIGY 336
Query: 246 SLNSVELGTALVDM 259
N + +G L+DM
Sbjct: 337 KGN-LFVGNVLIDM 349
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 112/203 (55%), Gaps = 4/203 (1%)
Query: 34 QIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSE 93
++F + D + NA+++ +A +G + +VFDE +++ +W LI GYVKN L SE
Sbjct: 228 ELFDKMPNRDTMSWNAMLNGYAVNGEVEMFEKVFDEMPERNVFSWNGLIGGYVKNGLFSE 287
Query: 94 ALKCFVKMRSTGTGV-DALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSAL 152
L+ F +M G + + T+V+VL A + G + GKWVH Y ++ + + +V + L
Sbjct: 288 TLESFKRMLVEGHVIPNDFTLVAVLSACSRLGALDMGKWVH-VYAESIGYKGNLFVGNVL 346
Query: 153 MDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVP 212
+DMY KCG ++A VF+ + +D++ W+ ++ G DA+ +F M S+ P
Sbjct: 347 IDMYAKCGVIENAVVVFNCL--DRKDIISWNTIINGLAIHGHAPDALGMFDRMKSEGEEP 404
Query: 213 NEFTLTSVLSACAHSGALDQGKL 235
+ T +LSAC H G + G L
Sbjct: 405 DGVTFVGILSACTHMGLVKDGFL 427
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 81/177 (45%), Gaps = 3/177 (1%)
Query: 26 EDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGY 85
E I AQI G + + F I+ + I A ++FD+ + W A+ GY
Sbjct: 26 ERLHQIQAQIVTHGLEHNDFVAPNFITTCSRFKRIHHARKLFDKIPQPNTATWNAMFRGY 85
Query: 86 VKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLD 145
++N + + F ++ + T ++++ G+ VH + G + +
Sbjct: 86 LQNGHHRDTVVLFGELNRIAGMPNCFTFPMIIKSCGKLEGVREGEEVHCCATKHG-FKSN 144
Query: 146 GYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVF 202
+V ++L+DMY K G +DA KVF EM R+VV W+ ++ GY+ C R+F
Sbjct: 145 SFVATSLIDMYSKKGCVEDAYKVFGEM--HERNVVVWTAIINGYILCGDVVSGRRLF 199
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 75/160 (46%), Gaps = 7/160 (4%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
+YA+ +G+ + F GN LI +A G I +A VF+ KDII+W +ING +
Sbjct: 329 VYAE--SIGYKGNLFVGNVLIDMYAKCGVIENAVVVFNCLDRKDIISWNTIINGLAIHGH 386
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAG--DDNFGKWVHGFYVQAGRVQLDGYV 148
+AL F +M+S G D +T V +L A G D F + + Q++ Y
Sbjct: 387 APDALGMFDRMKSEGEEPDGVTFVGILSACTHMGLVKDGFLYFKSMVDHYSIVPQIEHY- 445
Query: 149 WSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAG 188
++D+ + G D A +MP D V W+ L+
Sbjct: 446 -GCMVDLLGRAGLLDQALNFIRKMPIE-PDAVIWAALLGA 483
>Medtr1g103660.1 | PPR containing plant-like protein | HC |
chr1:46920306-46922872 | 20130731
Length = 684
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 132/262 (50%), Gaps = 9/262 (3%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPF---MIYAQIFKLGFDLDRFAGNALISAFANS 57
MR+ V+P+ TFP + K + +++ P I+ K G D F G + + +
Sbjct: 99 MRRDNVQPNDFTFPCVFK--ASALMQIPMTGKQIHGLALKGGMIYDVFVGCSCFDMYCKT 156
Query: 58 GFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVL 117
GF G AC +FDE +++ W A I+ V++ + + F + +++T + L
Sbjct: 157 GFHGDACNMFDEMPHRNLATWNAYISNAVQDRRSLDVIAAFKEFLCVHGEPNSITFCAFL 216
Query: 118 RAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYR 177
A N G+ +H F V+ G + D V + L+D Y KCG A VF + + +
Sbjct: 217 NACVDMMRLNLGRQLHAFIVRCGYKE-DVSVANGLIDFYGKCGDIVSAEMVFSRIG-NRK 274
Query: 178 DVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVH 237
+VV W ++ VQ ++ + A VF + + V P +F ++SVLSACA G L+ G+ VH
Sbjct: 275 NVVSWCSMLTALVQNHEEERACMVFLQVRKE-VEPTDFMISSVLSACAELGGLELGRSVH 333
Query: 238 QYIECKKVSLNSVELGTALVDM 259
+ K +++ +G+ALVD+
Sbjct: 334 A-LAVKACVKDNIFVGSALVDL 354
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 110/206 (53%), Gaps = 7/206 (3%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDE-SSVKDIIAWTALINGYVKND 89
++A I + G+ D N LI + G I SA VF + K++++W +++ V+N
Sbjct: 231 LHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSAEMVFSRIGNRKNVVSWCSMLTALVQNH 290
Query: 90 LPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVW 149
A F+++R D + SVL A A G G+ VH V+A V+ + +V
Sbjct: 291 EEERACMVFLQVRKEVEPTD-FMISSVLSACAELGGLELGRSVHALAVKAC-VKDNIFVG 348
Query: 150 SALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNML--S 207
SAL+D+Y KCG ++A +VF E+P S ++V W+ ++ GY A+R+F M S
Sbjct: 349 SALVDLYGKCGSIENAEQVFSELPES--NLVTWNAMIGGYAHQGDIDMALRLFEEMTLGS 406
Query: 208 DNVVPNEFTLTSVLSACAHSGALDQG 233
+ P+ TL S+LS C+ GA+++G
Sbjct: 407 RGIRPSYVTLVSILSVCSRVGAVERG 432
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 103/211 (48%), Gaps = 4/211 (1%)
Query: 31 IYAQIFKLGFD-LDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKND 89
I+A I + L F N L++ ++ + SA V + ++ ++ WT+LI+G V N
Sbjct: 28 IHAHIIRTHVTPLPSFLSNHLVNMYSKLDLLNSAQHVLSFTHLRTVVTWTSLISGCVHNR 87
Query: 90 LPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVW 149
AL F MR + T V +A+A+ GK +HG ++ G + D +V
Sbjct: 88 RFLPALLHFTNMRRDNVQPNDFTFPCVFKASALMQIPMTGKQIHGLALKGGMI-YDVFVG 146
Query: 150 SALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDN 209
+ DMY K G DAC +FDEMP +R++ W+ ++ VQ + D I F L +
Sbjct: 147 CSCFDMYCKTGFHGDACNMFDEMP--HRNLATWNAYISNAVQDRRSLDVIAAFKEFLCVH 204
Query: 210 VVPNEFTLTSVLSACAHSGALDQGKLVHQYI 240
PN T + L+AC L+ G+ +H +I
Sbjct: 205 GEPNSITFCAFLNACVDMMRLNLGRQLHAFI 235
>Medtr3g029530.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:9292413-9288471 | 20130731
Length = 1125
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 118/236 (50%), Gaps = 7/236 (2%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKP--VVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSG 58
MR++G+ + T LL P +++ I+A I GF+LD + ++LI+ +A G
Sbjct: 642 MRREGLLSNYITIVNLLGTCMSPDYLLKHGMPIHAHIVVAGFELDTYVQSSLITMYAQCG 701
Query: 59 FIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLR 118
+ ++ +FD + K+ W A+ + EALK +MR+ G +D + L
Sbjct: 702 DLNTSSYIFDVLANKNSSTWNAIFSANAHYGPGEEALKFIARMRNDGVDLDQFSFSVALA 761
Query: 119 AAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPY-SYR 177
+ G+ +H + ++ G +LD YV +A MDMY KCG DD VF +P R
Sbjct: 762 TIGNLTVLDEGQQLHSWIIKLG-FELDEYVLNATMDMYGKCGEIDD---VFRILPIPKIR 817
Query: 178 DVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
W++L++ + F+ A F ML + P+ T S+LSAC+H G +D+G
Sbjct: 818 SKRSWNILISALARHGFFRQATEAFHEMLDLGLKPDHVTFVSLLSACSHGGLVDEG 873
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 118/232 (50%), Gaps = 8/232 (3%)
Query: 29 FMIYAQIFKLGFDLDRFA-GNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVK 87
+ I + K G D + N+LIS F N + A +VF+ +D I+W ++I
Sbjct: 370 YQILGDVIKSGLDTSSVSVANSLISMFGNYDSVEEASRVFNNMQERDTISWNSIITASAH 429
Query: 88 NDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGY 147
N E+L F MR T D +T+ ++L A A +G+ +HG ++G ++ +
Sbjct: 430 NGRFEESLGHFFWMRRTHPKTDYITISALLPACGSAQHLKWGRGLHGLITKSG-LESNVC 488
Query: 148 VWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLS 207
V ++L+ MY + G +DA VF MP RD++ W+ ++A +V+ K+ AI + ML
Sbjct: 489 VCNSLLSMYAQAGSSEDAELVFHTMP--ARDLISWNSMMASHVEDGKYSHAILLLVEMLK 546
Query: 208 DNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
N T T+ LSAC + L++ K+VH ++ V N + +G LV M
Sbjct: 547 TRKAMNYVTFTTALSACYN---LEKLKIVHAFVIHFAVHHNLI-IGNTLVTM 594
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 112/242 (46%), Gaps = 4/242 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKP--VVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSG 58
M + GV P + ++ + + E I+ + K G + F G +L+ + G
Sbjct: 239 MFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMSNVFVGTSLLHFYGTHG 298
Query: 59 FIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLR 118
+ A ++F+E +I++WT+L+ Y N E L + +R G T+ +V+R
Sbjct: 299 SVSEANKLFEEIEEPNIVSWTSLMVCYADNGHTKEVLNIYRHLRHNGLICTGNTMATVIR 358
Query: 119 AAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRD 178
M GD G + G +++G V ++L+ M+ ++A +VF+ M RD
Sbjct: 359 TCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMFGNYDSVEEASRVFNNM--QERD 416
Query: 179 VVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQ 238
+ W+ ++ +F++++ F+ M + + T++++L AC + L G+ +H
Sbjct: 417 TISWNSIITASAHNGRFEESLGHFFWMRRTHPKTDYITISALLPACGSAQHLKWGRGLHG 476
Query: 239 YI 240
I
Sbjct: 477 LI 478
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 108/218 (49%), Gaps = 6/218 (2%)
Query: 25 VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALING 84
+E +++A + + GN L++ + G + A +V +D++ W ALI G
Sbjct: 566 LEKLKIVHAFVIHFAVHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMPERDVVTWNALIGG 625
Query: 85 YVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDD--NFGKWVHGFYVQAGRV 142
+ + P+ ++ F MR G + +T+V++L M+ D G +H V AG
Sbjct: 626 HADDKDPNATIQAFNLMRREGLLSNYITIVNLL-GTCMSPDYLLKHGMPIHAHIVVAG-F 683
Query: 143 QLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVF 202
+LD YV S+L+ MY +CG + + +FD + + ++ W+ + + ++A++
Sbjct: 684 ELDTYVQSSLITMYAQCGDLNTSSYIFDVL--ANKNSSTWNAIFSANAHYGPGEEALKFI 741
Query: 203 WNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYI 240
M +D V ++F+ + L+ + LD+G+ +H +I
Sbjct: 742 ARMRNDGVDLDQFSFSVALATIGNLTVLDEGQQLHSWI 779
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 105/218 (48%), Gaps = 4/218 (1%)
Query: 43 DRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMR 102
+ F N L++ ++ G I A VFD+ ++ +W +I+G+V+ +A++ F M
Sbjct: 181 NTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDASWNNMISGFVRVGWYHKAMQFFCHMF 240
Query: 103 STGTGVDALTVVSVLRAAAMAGDDNFG-KWVHGFYVQAGRVQLDGYVWSALMDMYFKCGH 161
G + + S++ A +G G + +HG+ V+ G + + +V ++L+ Y G
Sbjct: 241 ENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMS-NVFVGTSLLHFYGTHGS 299
Query: 162 CDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVL 221
+A K+F+E+ ++V W+ L+ Y ++ + ++ ++ + ++ T+ +V+
Sbjct: 300 VSEANKLFEEIEEP--NIVSWTSLMVCYADNGHTKEVLNIYRHLRHNGLICTGNTMATVI 357
Query: 222 SACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
C G G + + + +SV + +L+ M
Sbjct: 358 RTCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISM 395
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 79/135 (58%), Gaps = 7/135 (5%)
Query: 125 DDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSV 184
+ N GK +H V+ +Q + + + L++MY K G A VFD+M Y R+ W+
Sbjct: 162 EGNVGKALHALCVK-DVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKM-YD-RNDASWNN 218
Query: 185 LVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG-KLVHQY-IEC 242
+++G+V+ + A++ F +M + V P+ + + S+++AC SG + +G + +H Y ++C
Sbjct: 219 MISGFVRVGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKC 278
Query: 243 KKVSLNSVELGTALV 257
+S +V +GT+L+
Sbjct: 279 GLMS--NVFVGTSLL 291
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 93/246 (37%), Gaps = 59/246 (23%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
MR GV+ DQ +F + L V+++ +++ I KLGF+LD + NA + + G
Sbjct: 744 MRNDGVDLDQFSFSVALATIGNLTVLDEGQQLHSWIIKLGFELDEYVLNATMDMYGKCGE 803
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
I ++ ++ +W LI+ ++ +A + F +M G D +T VS+L A
Sbjct: 804 IDDVFRILPIPKIRSKRSWNILISALARHGFFRQATEAFHEMLDLGLKPDHVTFVSLLSA 863
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS-----------ALMDMYFKCGHCDDACKV 168
+ HG V G V ++D+ + G +A
Sbjct: 864 CS-----------HGGLVDEGLVYFSSMTSEFGVPTAIEHCVCIIDLLGRSGRLAEAEGF 912
Query: 169 FDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSG 228
D+MP V PNEF S+L+AC G
Sbjct: 913 IDKMP------------------------------------VPPNEFVWRSLLAACKVHG 936
Query: 229 ALDQGK 234
L+ G+
Sbjct: 937 NLELGR 942
>Medtr8g096030.1 | PPR containing plant-like protein | HC |
chr8:40057307-40055314 | 20130731
Length = 494
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 138/273 (50%), Gaps = 35/273 (12%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
+R+ + D HTFPL+LK S+ + +++Q+FK GF +D F N+LI ++ +
Sbjct: 104 LRRLFLTLDFHTFPLILKASSQLHSLSLAQSLHSQVFKYGFLVDSFVMNSLIRVYSVNDR 163
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKN-----------DLPS---------------- 92
+ A +VF ES +DI+++ +I+G+VKN ++P
Sbjct: 164 VNDAYKVFCESGYRDIVSYNVMIDGFVKNFKLDRARELFDEMPQRNEVTWGTMIAGYSQA 223
Query: 93 ----EALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYV 148
EA++ F +M D + +VSVL A A G+ G++VH + + G +++D Y+
Sbjct: 224 KLCREAVELFNEMIGLEFIPDNIALVSVLSACAQLGELEQGRFVHDYITRNG-IRVDSYL 282
Query: 149 WSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSD 208
+ L+D+Y KCG + A + F+ + +DV W+ ++ G+ + + F M+ +
Sbjct: 283 TTGLVDLYAKCGCVEIARETFESC--TNKDVFTWNAMLVGFAIHGQGLVLLEYFSRMVGE 340
Query: 209 NVVPNEFTLTSVLSACAHSGALDQGKLVHQYIE 241
+ P+ T VL C+H+G + + + V +E
Sbjct: 341 GIKPDGVTFLGVLVGCSHAGLVCEARKVFDEME 373
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 106/240 (44%), Gaps = 35/240 (14%)
Query: 51 ISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDA 110
I ++NS A +F+ + LI + P ALK F+ +R +D
Sbjct: 54 IKTYSNSFLTTYALSLFNSIPNPTTFTFNTLIRIHTLLSSPLSALKIFLSLRRLFLTLDF 113
Query: 111 LTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVF- 169
T +L+A++ + + +H + G + +D +V ++L+ +Y +DA KVF
Sbjct: 114 HTFPLILKASSQLHSLSLAQSLHSQVFKYGFL-VDSFVMNSLIRVYSVNDRVNDAYKVFC 172
Query: 170 ------------------------------DEMPYSYRDVVCWSVLVAGYVQCNKFQDAI 199
DEMP R+ V W ++AGY Q ++A+
Sbjct: 173 ESGYRDIVSYNVMIDGFVKNFKLDRARELFDEMPQ--RNEVTWGTMIAGYSQAKLCREAV 230
Query: 200 RVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
+F M+ +P+ L SVLSACA G L+QG+ VH YI + ++S L T LVD+
Sbjct: 231 ELFNEMIGLEFIPDNIALVSVLSACAQLGELEQGRFVHDYITRNGIRVDSY-LTTGLVDL 289
>Medtr1g083890.1 | PPR containing plant-like protein | HC |
chr1:37365601-37367754 | 20130731
Length = 490
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 124/261 (47%), Gaps = 34/261 (13%)
Query: 8 PDQHTFPLLLKMFSKPVVEDPFM-IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQV 66
PD TFP LLK S D ++A + LGF L+ ++N G + A +V
Sbjct: 106 PDNFTFPPLLKATSYLRDYDLGQCLHAHVTALGFYRHSPVEIGLLEVYSNCGKMEDANKV 165
Query: 67 FDESSVKDIIAWTALINGYVK-NDLP------------------------------SEAL 95
FDE ++++ W +ING+ K DL EA
Sbjct: 166 FDEMLHREVVVWNIMINGFCKMGDLEIGLKLFKRMGQRSVVSWNLMISCLAQRKKDGEAF 225
Query: 96 KCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDM 155
F +M G D T+V+VL A GD + G+W+H + G ++ V ++L+D
Sbjct: 226 GIFREMLEQGFEPDDATLVTVLPVCARLGDVDAGEWIHSYADGKGLLRKVISVGNSLVDF 285
Query: 156 YFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEF 215
Y KCG+ + A KVF+EM + ++VV W+ +++G K + + +F M V P++
Sbjct: 286 YCKCGNLEAAWKVFNEM--TKKNVVSWNAMISGLGLNGKGELGVELFEKMARKGVTPSDS 343
Query: 216 TLTSVLSACAHSGALDQGKLV 236
T VL+ CAH+G +D+G+ +
Sbjct: 344 TFVGVLACCAHAGFVDKGREI 364
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 109/258 (42%), Gaps = 31/258 (12%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
I+A + G + +S + I A +F+ + +I+ + ++I +
Sbjct: 28 IHAHFLRHGLHHSNQILSHFVSVCTSLHQIPYATTIFNHTHHPNILLFNSIIKAHSSFPP 87
Query: 91 PSEALKCFVKMRSTGTGV-DALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVW 149
++ F M+ T + D T +L+A + D + G+ +H +V A V
Sbjct: 88 FHQSFHFFNLMKMTHNILPDNFTFPPLLKATSYLRDYDLGQCLHA-HVTALGFYRHSPVE 146
Query: 150 SALMDMYFKCGHCDDACKVFDEMPY-----------------------------SYRDVV 180
L+++Y CG +DA KVFDEM + R VV
Sbjct: 147 IGLLEVYSNCGKMEDANKVFDEMLHREVVVWNIMINGFCKMGDLEIGLKLFKRMGQRSVV 206
Query: 181 CWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYI 240
W+++++ Q K +A +F ML P++ TL +VL CA G +D G+ +H Y
Sbjct: 207 SWNLMISCLAQRKKDGEAFGIFREMLEQGFEPDDATLVTVLPVCARLGDVDAGEWIHSYA 266
Query: 241 ECKKVSLNSVELGTALVD 258
+ K + + +G +LVD
Sbjct: 267 DGKGLLRKVISVGNSLVD 284
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 66/141 (46%), Gaps = 1/141 (0%)
Query: 47 GNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGT 106
GN+L+ + G + +A +VF+E + K++++W A+I+G N ++ F KM G
Sbjct: 279 GNSLVDFYCKCGNLEAAWKVFNEMTKKNVVSWNAMISGLGLNGKGELGVELFEKMARKGV 338
Query: 107 GVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDAC 166
T V VL A AG + G+ + ++ + ++D+ +CGH +A
Sbjct: 339 TPSDSTFVGVLACCAHAGFVDKGREIFDSMTVKFKLSPKLEHYGCVVDLLGRCGHVKEAY 398
Query: 167 KVFDEMPYSYRDVVCWSVLVA 187
+ MP + W L++
Sbjct: 399 DLIRNMPL-MPNAALWGALLS 418
>Medtr4g098940.1 | PPR containing plant-like protein | HC |
chr4:40871758-40869320 | 20130731
Length = 575
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 136/262 (51%), Gaps = 13/262 (4%)
Query: 1 MRQKGVEPDQHTFPLLLKM-FSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M K V P+ +TFPL+LK+ + +A++ K GF D F N+LI ++ G
Sbjct: 111 MIAKSVPPNHYTFPLILKLCVDHGCKLEGEKGHARVVKFGFLSDLFVRNSLIRMYSVFGR 170
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
I A +F ES V D++++ +I+GYVKN +A K F +M D + ++
Sbjct: 171 IDDARLIFYESYVLDLVSYNTMIDGYVKNGGIRDARKLFDEMYER----DVFSWNCMIAG 226
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMP-YSYRD 178
GD K + F + D W+ ++D + G+ A + F++M R+
Sbjct: 227 YVSVGDLAAAKEL--FEAMPNK---DVVSWNCMIDGCVRVGNVSLALEFFNQMDGVVVRN 281
Query: 179 VVCWSVLVAGYVQCNKFQDAIRVFWNML-SDNVVPNEFTLTSVLSACAHSGALDQGKLVH 237
VV W+ L+A +V+ + + +R+F M+ S +PNE TL SVL+ACA+ G L+ G VH
Sbjct: 282 VVSWNSLLALHVRMKNYGECLRMFERMMESGEAMPNEATLVSVLTACANLGKLNLGLWVH 341
Query: 238 QYIECKKVSLNSVELGTALVDM 259
YI+ ++ L+ V L T L+ M
Sbjct: 342 SYIKSNEIKLD-VLLETCLLTM 362
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 108/204 (52%), Gaps = 7/204 (3%)
Query: 34 QIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESS---VKDIIAWTALINGYVKNDL 90
++F+ + D + N +I G + A + F++ V+++++W +L+ +V+
Sbjct: 238 ELFEAMPNKDVVSWNCMIDGCVRVGNVSLALEFFNQMDGVVVRNVVSWNSLLALHVRMKN 297
Query: 91 PSEALKCFVKMRSTGTGV-DALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVW 149
E L+ F +M +G + + T+VSVL A A G N G WVH Y+++ ++LD +
Sbjct: 298 YGECLRMFERMMESGEAMPNEATLVSVLTACANLGKLNLGLWVHS-YIKSNEIKLDVLLE 356
Query: 150 SALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDN 209
+ L+ MY KCG D A VF EMP + +V W+ ++ GY A+ +F M
Sbjct: 357 TCLLTMYAKCGAMDLASDVFVEMPV--KSIVSWNSMIMGYGLHGNGDKALEMFAEMEKAG 414
Query: 210 VVPNEFTLTSVLSACAHSGALDQG 233
PNE T VLSAC+H+G + +G
Sbjct: 415 QKPNEATFICVLSACSHAGMVMEG 438
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 72/158 (45%), Gaps = 1/158 (0%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
+++ I LD L++ +A G + A VF E VK I++W ++I GY +
Sbjct: 340 VHSYIKSNEIKLDVLLETCLLTMYAKCGAMDLASDVFVEMPVKSIVSWNSMIMGYGLHGN 399
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
+AL+ F +M G + T + VL A + AG G W + +++ +
Sbjct: 400 GDKALEMFAEMEKAGQKPNEATFICVLSACSHAGMVMEGWWYFDLMRRVYKIEPKVEHYG 459
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAG 188
++D+ + G ++ ++ +++ + W L++G
Sbjct: 460 CMVDLLARAGFVKNSEELIEKVSVKGGSAM-WGALLSG 496
>Medtr2g072010.1 | PPR containing plant-like protein | HC |
chr2:30162883-30164901 | 20130731
Length = 515
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 130/250 (52%), Gaps = 19/250 (7%)
Query: 1 MRQKGV-EPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDL--------------DR 44
MR++GV E + T +++K V+D I+ + +LGF+ D
Sbjct: 161 MRREGVVEVNSTTMTIMIKGCGNCGGVKDGMQIHGLVSRLGFEFVDAAYEVFERMPEKDL 220
Query: 45 FAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRST 104
+ A+I F G +G ++FD KD WT LI+G+V N+ EAL +V+M
Sbjct: 221 ISWTAMIRRFVTDGRMGKPVELFDTLKEKDDFVWTVLISGFVSNEEYEEALCWYVRMNRE 280
Query: 105 GTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDD 164
G + LT+ SVL A+A N G +H +V ++ D + ++L+ Y KCG+ D
Sbjct: 281 GCKPNPLTISSVLAASASLVALNEGLQIHS-HVLKMNLEYDLSIQNSLISFYAKCGNVTD 339
Query: 165 ACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSAC 224
A K+F ++ +VV + ++ G+ Q ++A+ ++ M ++++ PN T +VLSAC
Sbjct: 340 AYKIFVDV--VELNVVSNNSVINGFTQNGFGEEALNMYKRMQNESLEPNRVTFLAVLSAC 397
Query: 225 AHSGALDQGK 234
H+G +++G+
Sbjct: 398 THAGLIEEGR 407
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 103/207 (49%), Gaps = 16/207 (7%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGT- 106
+A++ G IG A ++FD +++++W+A+I+GY++ L F++MR G
Sbjct: 108 SAVVVGLCRDGRIGYARKLFDRMPERNVVSWSAMIDGYMEKGLFENGFGFFLEMRREGVV 167
Query: 107 GVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAG-------------RVQLDGYVWSALM 153
V++ T+ +++ G G +HG + G + D W+A++
Sbjct: 168 EVNSTTMTIMIKGCGNCGGVKDGMQIHGLVSRLGFEFVDAAYEVFERMPEKDLISWTAMI 227
Query: 154 DMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPN 213
+ G ++FD + +D W+VL++G+V ++++A+ + M + PN
Sbjct: 228 RRFVTDGRMGKPVELFDTL--KEKDDFVWTVLISGFVSNEEYEEALCWYVRMNREGCKPN 285
Query: 214 EFTLTSVLSACAHSGALDQGKLVHQYI 240
T++SVL+A A AL++G +H ++
Sbjct: 286 PLTISSVLAASASLVALNEGLQIHSHV 312
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 90/197 (45%), Gaps = 21/197 (10%)
Query: 49 ALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYV----KNDLPSEALK---CFVKM 101
A++ +A +G I +A ++FD+ + + A+I+GY+ K L E + C +
Sbjct: 11 AMLVVYAKNGQIINARKLFDKMPERTTATYNAMISGYILKARKFHLAEELYREVPCEFR- 69
Query: 102 RSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGH 161
D + +++ G+ N V + G + D WSA++ + G
Sbjct: 70 -------DPVCSNALMNGYLKIGETNEALRV---FENVGESKRDVVSWSAVVVGLCRDGR 119
Query: 162 CDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVP-NEFTLTSV 220
A K+FD MP R+VV WS ++ GY++ F++ F M + VV N T+T +
Sbjct: 120 IGYARKLFDRMP--ERNVVSWSAMIDGYMEKGLFENGFGFFLEMRREGVVEVNSTTMTIM 177
Query: 221 LSACAHSGALDQGKLVH 237
+ C + G + G +H
Sbjct: 178 IKGCGNCGGVKDGMQIH 194
>Medtr5g040920.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:17991225-17993175 | 20130731
Length = 586
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 105/199 (52%), Gaps = 7/199 (3%)
Query: 37 KLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALK 96
KLG + + LI+ + G I ++ +VFD+ ++A+ A+I +N+ +EAL
Sbjct: 140 KLGVSDNMYVVPTLINMYTACGDIDASRRVFDKIDEPCVVAYNAIIMSLARNNRANEALA 199
Query: 97 CFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVW--SALMD 154
F +++ G +T++ VL + A+ G + G+W+H + + G D YV + L+D
Sbjct: 200 LFRELQEIGLKPTDVTMLVVLSSCALLGSLDLGRWMHEYVKKYG---FDRYVKVNTTLID 256
Query: 155 MYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNE 214
MY KCG DDA VF +MP RD WS ++ Y AI + M + V P+E
Sbjct: 257 MYAKCGSLDDAVNVFRDMP--KRDTQAWSAIIVAYATHGDGFQAISMLNEMKKEKVQPDE 314
Query: 215 FTLTSVLSACAHSGALDQG 233
T +L AC+H+G +++G
Sbjct: 315 ITFLGILYACSHNGLVEEG 333
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 103/198 (52%), Gaps = 21/198 (10%)
Query: 63 ACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAM 122
A Q+FD+ + +I+ + + GY + + P + F + L +VS ++A A
Sbjct: 80 AHQLFDQITQPNIVLFNTMARGYARLNDPLRMITHFRR---------CLRLVSKVKALAE 130
Query: 123 AGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCW 182
GK +H F V+ G V + YV L++MY CG D + +VFD++ VV +
Sbjct: 131 ------GKQLHCFAVKLG-VSDNMYVVPTLINMYTACGDIDASRRVFDKIDEPC--VVAY 181
Query: 183 SVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIEC 242
+ ++ + N+ +A+ +F + + P + T+ VLS+CA G+LD G+ +H+Y+
Sbjct: 182 NAIIMSLARNNRANEALALFRELQEIGLKPTDVTMLVVLSSCALLGSLDLGRWMHEYV-- 239
Query: 243 KKVSLNS-VELGTALVDM 259
KK + V++ T L+DM
Sbjct: 240 KKYGFDRYVKVNTTLIDM 257
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 74/160 (46%), Gaps = 5/160 (3%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
++ + K GFD LI +A G + A VF + +D AW+A+I Y +
Sbjct: 235 MHEYVKKYGFDRYVKVNTTLIDMYAKCGSLDDAVNVFRDMPKRDTQAWSAIIVAYATHGD 294
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAG--DDNFGKWVHGFYVQAGRVQLDGYV 148
+A+ +M+ D +T + +L A + G ++ F ++ HG + G V +
Sbjct: 295 GFQAISMLNEMKKEKVQPDEITFLGILYACSHNGLVEEGF-EYFHGMTNEYGIVPSIKH- 352
Query: 149 WSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAG 188
+ ++D+ + G D+A K DE+P ++ W L++
Sbjct: 353 YGCMVDLLGRAGRLDEAYKFIDELPIKPTPIL-WRTLLSA 391
>Medtr3g466010.1 | PPR containing plant-like protein | HC |
chr3:27120018-27122473 | 20130731
Length = 536
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 133/275 (48%), Gaps = 46/275 (16%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPF------MIYAQIFKLGFDLDRFAGNALI--- 51
MR++ + +QHTF LL +K +D F ++ + KLG+ + F NALI
Sbjct: 98 MRRRFLNANQHTFTFLLHACTKG--KDCFNIVSGVQVHDHVVKLGYTGNVFVRNALIHFY 155
Query: 52 --------------------------------SAFANSGFIGSACQVFDESSVKDIIAWT 79
+ G + A ++FDE +D+++W+
Sbjct: 156 FEGFDVSEYAKRVFEEEVDEVCSDVVTWNSMLAGLVRKGEVRDAEKMFDEMPKRDVVSWS 215
Query: 80 ALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQA 139
++I GYV+N + L+CF MR G + +V++L A+A G +G++VH +++
Sbjct: 216 SMIMGYVQNGKLEDGLECFRLMREKGIRPNESILVTMLSASAQLGLLGWGRFVHS-TIES 274
Query: 140 GRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAI 199
R ++ + + L+DMY KCG +++ +FD M RD+ W+V++ G ++ ++A+
Sbjct: 275 LRFRISVAIGTGLVDMYAKCGCIEESRDLFDGM--MERDIWTWTVMICGLASHDRAKEAL 332
Query: 200 RVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGK 234
+F + + P VL+AC+ +G + +G+
Sbjct: 333 VLFREFIREGFRPVNVIFVGVLNACSRAGLVSEGR 367
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 65/115 (56%), Gaps = 3/115 (2%)
Query: 145 DGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWN 204
D W++++ + G DA K+FDEMP RDVV WS ++ GYVQ K +D + F
Sbjct: 179 DVVTWNSMLAGLVRKGEVRDAEKMFDEMPK--RDVVSWSSMIMGYVQNGKLEDGLECFRL 236
Query: 205 MLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
M + PNE L ++LSA A G L G+ VH IE + + SV +GT LVDM
Sbjct: 237 MREKGIRPNESILVTMLSASAQLGLLGWGRFVHSTIESLRFRI-SVAIGTGLVDM 290
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 85/187 (45%), Gaps = 2/187 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
MR+KG+ P++ +L ++ ++ +++ I L F + G L+ +A G
Sbjct: 237 MREKGIRPNESILVTMLSASAQLGLLGWGRFVHSTIESLRFRISVAIGTGLVDMYAKCGC 296
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
I + +FD +DI WT +I G +D EAL F + G + V VL A
Sbjct: 297 IEESRDLFDGMMERDIWTWTVMICGLASHDRAKEALVLFREFIREGFRPVNVIFVGVLNA 356
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
+ AG + G++ V + + + ++D++ + G D+A ++ + M D
Sbjct: 357 CSRAGLVSEGRYYFKLMVDGYGISPEMEHYGCMVDLFARAGLIDEAVRLIETMTVE-PDP 415
Query: 180 VCWSVLV 186
V W+ L+
Sbjct: 416 VMWATLL 422
>Medtr7g011030.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:2861060-2858958 | 20130731
Length = 700
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 104/203 (51%), Gaps = 3/203 (1%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
++AQ+ K G D F G+ L+ F G + SA +VFD ++++ WT+L+ Y++N
Sbjct: 249 VHAQLLKGGLTFDVFVGSMLVDMFGKCGDVLSARKVFDGLQNRNVVVWTSLMTAYLQNGE 308
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
E L M GT + T +L A A G +H + G ++ V +
Sbjct: 309 FEETLNLLSCMDREGTMSNEFTFAVLLNAFAGMAALRHGDLLHARVEKLG-IKNRVIVGN 367
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV 210
AL++MY KCG D + VF +M RD++ W+ ++ GY Q + A+ +F +MLS
Sbjct: 368 ALINMYSKCGCIDSSYDVFFDM--RNRDIITWNAMICGYSQHGLGKQALLLFQDMLSAGE 425
Query: 211 VPNEFTLTSVLSACAHSGALDQG 233
PN T VLSACAH +++G
Sbjct: 426 CPNHVTFVGVLSACAHLALVNEG 448
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 126/259 (48%), Gaps = 10/259 (3%)
Query: 7 EPDQHTFPLLLKMFSKP-VVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQ 65
+P+++ F +L + V + + +FK G F ++L+ ++ + A Q
Sbjct: 118 QPNEYVFTTVLSACAHSGRVFEGMQCHGFLFKFGLVFHHFVKSSLVHMYSKCFHVDLALQ 177
Query: 66 VFDES-----SVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAA 120
V + + D + +++N V++ EA++ +M G D++T VSV+
Sbjct: 178 VLESEHGNIDNDNDAFCYNSVLNALVESGRLGEAVEVLGRMVDEGVVWDSVTYVSVMGLC 237
Query: 121 AMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVV 180
D G VH ++ G + D +V S L+DM+ KCG A KVFD + R+VV
Sbjct: 238 GQIRDLGLGLQVHAQLLKGG-LTFDVFVGSMLVDMFGKCGDVLSARKVFDGL--QNRNVV 294
Query: 181 CWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYI 240
W+ L+ Y+Q +F++ + + M + + NEFT +L+A A AL G L+H +
Sbjct: 295 VWTSLMTAYLQNGEFEETLNLLSCMDREGTMSNEFTFAVLLNAFAGMAALRHGDLLHARV 354
Query: 241 ECKKVSLNSVELGTALVDM 259
E + N V +G AL++M
Sbjct: 355 EKLGIK-NRVIVGNALINM 372
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 104/215 (48%), Gaps = 5/215 (2%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTG 107
N+LI+ + + A +FDE S++ ++++ L+ GY+ + E +K F M S+
Sbjct: 59 NSLINLYVKCSKLRLARYLFDEMSLRSVVSYNVLMGGYLHSGEHLEVVKLFKNMVSSLYQ 118
Query: 108 VDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACK 167
+ +VL A A +G G HGF + G V +V S+L+ MY KC H D A +
Sbjct: 119 PNEYVFTTVLSACAHSGRVFEGMQCHGFLFKFGLV-FHHFVKSSLVHMYSKCFHVDLALQ 177
Query: 168 VFDEMPYSY---RDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSAC 224
V + + D C++ ++ V+ + +A+ V M+ + VV + T SV+ C
Sbjct: 178 VLESEHGNIDNDNDAFCYNSVLNALVESGRLGEAVEVLGRMVDEGVVWDSVTYVSVMGLC 237
Query: 225 AHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
L G VH + ++ + V +G+ LVDM
Sbjct: 238 GQIRDLGLGLQVHAQLLKGGLTFD-VFVGSMLVDM 271
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 69/126 (54%), Gaps = 19/126 (15%)
Query: 127 NFGKWVHG------------FYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPY 174
NFGK +H Y + +QL+ +L+++Y KC A +FDEM
Sbjct: 29 NFGKSIHTQLLIRNQSSTHHSYREFNIIQLN-----SLINLYVKCSKLRLARYLFDEM-- 81
Query: 175 SYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGK 234
S R VV ++VL+ GY+ + + +++F NM+S PNE+ T+VLSACAHSG + +G
Sbjct: 82 SLRSVVSYNVLMGGYLHSGEHLEVVKLFKNMVSSLYQPNEYVFTTVLSACAHSGRVFEGM 141
Query: 235 LVHQYI 240
H ++
Sbjct: 142 QCHGFL 147
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 92/187 (49%), Gaps = 2/187 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKMFS-KPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M ++G ++ TF +LL F+ + +++A++ KLG GNALI+ ++ G
Sbjct: 319 MDREGTMSNEFTFAVLLNAFAGMAALRHGDLLHARVEKLGIKNRVIVGNALINMYSKCGC 378
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
I S+ VF + +DII W A+I GY ++ L +AL F M S G + +T V VL A
Sbjct: 379 IDSSYDVFFDMRNRDIITWNAMICGYSQHGLGKQALLLFQDMLSAGECPNHVTFVGVLSA 438
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
A N G + ++ +V+ ++ ++ + + G ++A + DV
Sbjct: 439 CAHLALVNEGFYYLNQLMKHFKVEPGLEHYTCVVAVLCRAGMLEEAENFMRTTQVKW-DV 497
Query: 180 VCWSVLV 186
V W VL+
Sbjct: 498 VAWRVLL 504
>Medtr5g008840.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:1959596-1956593 | 20130731
Length = 831
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 122/227 (53%), Gaps = 4/227 (1%)
Query: 8 PDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQV 66
PD+ T ++L ++ ++E ++A KLGF D + ++LI+ ++ G + + V
Sbjct: 416 PDRTTLAIILSSCAELGLLEAGKQVHAVSQKLGFYDDVYVASSLINVYSKCGKMEVSKHV 475
Query: 67 FDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDD 126
F + S D++ W ++I G+ N L +AL CF +MR G + ++ + A
Sbjct: 476 FSKLSELDVVCWNSMIAGFSINSLEQDALACFKRMRQFGFFPSEFSFATIASSCAKLSSL 535
Query: 127 NFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLV 186
G+ +H ++ G V + +V S+L++MY KCG A FD MP +++V W+ ++
Sbjct: 536 FQGQQIHAQIIKDGYVD-NVFVGSSLVEMYCKCGDVGAARYYFDMMP--GKNIVTWNEMI 592
Query: 187 AGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
GY +A+ ++ +M+S P++ T +VL+AC+HS +D+G
Sbjct: 593 HGYAHNGYGLEAVSLYKDMISSGEKPDDITFVAVLTACSHSALVDEG 639
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 120/221 (54%), Gaps = 4/221 (1%)
Query: 39 GFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCF 98
G++ D +++A SG + Q+FD S +I+W A+++GY ++ EA++ F
Sbjct: 347 GYEPDDVTYINMLTACVKSGDVKVGRQIFDCMSSPSLISWNAILSGYNQSADHGEAVELF 406
Query: 99 VKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFK 158
KM+ D T+ +L + A G GK VH + G D YV S+L+++Y K
Sbjct: 407 RKMQFQWQNPDRTTLAIILSSCAELGLLEAGKQVHAVSQKLGFYD-DVYVASSLINVYSK 465
Query: 159 CGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLT 218
CG + + VF ++ S DVVCW+ ++AG+ + QDA+ F M P+EF+
Sbjct: 466 CGKMEVSKHVFSKL--SELDVVCWNSMIAGFSINSLEQDALACFKRMRQFGFFPSEFSFA 523
Query: 219 SVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
++ S+CA +L QG+ +H I K +++V +G++LV+M
Sbjct: 524 TIASSCAKLSSLFQGQQIHAQI-IKDGYVDNVFVGSSLVEM 563
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 104/214 (48%), Gaps = 15/214 (7%)
Query: 35 IFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEA 94
+ K+GFD + + NAL+ + G A +VF+ + + +T ++ G + + E
Sbjct: 164 VLKVGFDSNIYVSNALLCMYTKCGLNEDAFRVFEGIVEPNEVTFTTMMGGLSQTNQVKEG 223
Query: 95 LKCFVKMRSTGTGVDALTVVSVLRAAAMA-----GDDNF-------GKWVHGFYVQAGRV 142
L+ F M G VD++++ ++L A DD+ GK +H V+ G
Sbjct: 224 LELFRLMLRKGICVDSVSLSTILVICAKGVSFGVCDDSRGLSTNAQGKQIHTLAVKHG-F 282
Query: 143 QLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVF 202
+ D ++ ++L+DMY K G D A VF+ + VV W+++++GY + A+ F
Sbjct: 283 ERDLHLCNSLLDMYAKTGDMDSAENVFENL--DKHSVVSWNIMISGYGNRCDSEKALECF 340
Query: 203 WNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLV 236
M P++ T ++L+AC SG + G+ +
Sbjct: 341 QRMQCCGYEPDDVTYINMLTACVKSGDVKVGRQI 374
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 94/207 (45%), Gaps = 38/207 (18%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
I+ K GF+ D N+L+ +A +G + SA VF+ +++W +I+GY
Sbjct: 273 IHTLAVKHGFERDLHLCNSLLDMYAKTGDMDSAENVFENLDKHSVVSWNIMISGYGNRCD 332
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
+AL+CF +M+ G D +T +++L A +GD V+ GR
Sbjct: 333 SEKALECFQRMQCCGYEPDDVTYINMLTACVKSGD-----------VKVGR--------- 372
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV 210
++FD M S ++ W+ +++GY Q +A+ +F M
Sbjct: 373 ----------------QIFDCM--SSPSLISWNAILSGYNQSADHGEAVELFRKMQFQWQ 414
Query: 211 VPNEFTLTSVLSACAHSGALDQGKLVH 237
P+ TL +LS+CA G L+ GK VH
Sbjct: 415 NPDRTTLAIILSSCAELGLLEAGKQVH 441
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 109/228 (47%), Gaps = 17/228 (7%)
Query: 45 FAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCF-VKMRS 103
F+ NA++SAF S + AC++F + ++ ++ +I VKN +AL + + M
Sbjct: 72 FSYNAILSAFCKSNNLQYACRLFLQMPERNTVSLNTIITTMVKNGYERQALDTYDLMMVY 131
Query: 104 TGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCD 163
+T +V A D N G+ HG ++ G + YV +AL+ MY KCG +
Sbjct: 132 ESVKPSHITFATVFSACGGLKDVNCGRRNHGLVLKVG-FDSNIYVSNALLCMYTKCGLNE 190
Query: 164 DACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSA 223
DA +VF+ + + V ++ ++ G Q N+ ++ + +F ML + + +L+++L
Sbjct: 191 DAFRVFEGIVEP--NEVTFTTMMGGLSQTNQVKEGLELFRLMLRKGICVDSVSLSTILVI 248
Query: 224 CAHS---GALD---------QGKLVHQYIECKKVSLNSVELGTALVDM 259
CA G D QGK +H + K + L +L+DM
Sbjct: 249 CAKGVSFGVCDDSRGLSTNAQGKQIHT-LAVKHGFERDLHLCNSLLDM 295
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 94/191 (49%), Gaps = 6/191 (3%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
MRQ G P + +F + +K + I+AQI K G+ + F G++L+ + G
Sbjct: 510 MRQFGFFPSEFSFATIASSCAKLSSLFQGQQIHAQIIKDGYVDNVFVGSSLVEMYCKCGD 569
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+G+A FD K+I+ W +I+GY N EA+ + M S+G D +T V+VL A
Sbjct: 570 VGAARYYFDMMPGKNIVTWNEMIHGYAHNGYGLEAVSLYKDMISSGEKPDDITFVAVLTA 629
Query: 120 AAMAGDDNFGKWVHGFYVQAGRV--QLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYR 177
+ + + G + +Q V +LD Y + ++D + G ++ + D MPY
Sbjct: 630 CSHSALVDEGVEIFSSMLQKFEVVPKLDHY--TCIIDCLGRVGRFNEVEVILDTMPYK-D 686
Query: 178 DVVCWSVLVAG 188
D + W V+++
Sbjct: 687 DTIVWEVVLSS 697
>Medtr8g089940.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:37579244-37581349 | 20130731
Length = 701
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 115/210 (54%), Gaps = 3/210 (1%)
Query: 34 QIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSE 93
Q+F D ++ NAL+SA+A G + VFD + +D +++ +I + N L +
Sbjct: 87 QLFDKMSKRDIYSWNALLSAYAKVGLVEDLNLVFDRMACRDSVSYNTMIACFASNWLSGK 146
Query: 94 ALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALM 153
AL+ FV+M+ G + V+ L+A + D GK +HG V G + + +VW+A+
Sbjct: 147 ALRFFVRMQEDGFRPTQYSYVNALQACSQLLDFRLGKQIHGRVV-VGEFEKNVFVWNAVT 205
Query: 154 DMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPN 213
D+Y KCG D A +FD M +++V W+++++GYV+ K + I F M + P+
Sbjct: 206 DLYAKCGDIDRARWLFDGM--VNKNLVSWNLMISGYVKMGKPDECISFFNKMQLSGLKPD 263
Query: 214 EFTLTSVLSACAHSGALDQGKLVHQYIECK 243
+ T++SVL+A SG +D + + I+ K
Sbjct: 264 QVTVSSVLNAYFQSGRVDDARNMFDKIDKK 293
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 126/260 (48%), Gaps = 40/260 (15%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPV-VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M++ G P Q+++ L+ S+ + I+ ++ F+ + F NA+ +A G
Sbjct: 154 MQEDGFRPTQYSYVNALQACSQLLDFRLGKQIHGRVVVGEFEKNVFVWNAVTDLYAKCGD 213
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
I A +FD K++++W +I+GYVK P E + F KM+ +G D +TV SVL A
Sbjct: 214 IDRARWLFDGMVNKNLVSWNLMISGYVKMGKPDECISFFNKMQLSGLKPDQVTVSSVLNA 273
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
YF+ G DDA +FD++ +D
Sbjct: 274 ------------------------------------YFQSGRVDDARNMFDKI--DKKDE 295
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQY 239
+CW+ ++ GY Q + +DA+ +F ML NV P+ T+++V+S+CA +L G+ VH
Sbjct: 296 ICWTTMIVGYAQSGREEDALMLFSEMLRGNVRPDSHTISTVVSSCAKLASLYHGQAVHGK 355
Query: 240 IECKKVSLNSVELGTALVDM 259
+ V N + + +ALVDM
Sbjct: 356 VILMGVDSNML-VSSALVDM 374
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 107/196 (54%), Gaps = 3/196 (1%)
Query: 39 GFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCF 98
G D+ +++++A+ SG + A +FD+ KD I WT +I GY ++ +AL F
Sbjct: 259 GLKPDQVTVSSVLNAYFQSGRVDDARNMFDKIDKKDEICWTTMIVGYAQSGREEDALMLF 318
Query: 99 VKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFK 158
+M D+ T+ +V+ + A G+ VHG + G V + V SAL+DMY K
Sbjct: 319 SEMLRGNVRPDSHTISTVVSSCAKLASLYHGQAVHGKVILMG-VDSNMLVSSALVDMYCK 377
Query: 159 CGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLT 218
CG DA +F+ MP ++V+ W+ ++ GY Q + ++A+ ++ ML +N P+ +
Sbjct: 378 CGVPLDARVIFETMP--IKNVIIWNSMILGYAQNGEAEEALTLYERMLQENFKPDNISFV 435
Query: 219 SVLSACAHSGALDQGK 234
VLSAC ++ + +G+
Sbjct: 436 GVLSACINTNMVKEGR 451
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 81/189 (42%), Gaps = 5/189 (2%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M + V PD HT ++ +K + ++ ++ +G D + +AL+ + G
Sbjct: 321 MLRGNVRPDSHTISTVVSSCAKLASLYHGQAVHGKVILMGVDSNMLVSSALVDMYCKCGV 380
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
A +F+ +K++I W ++I GY +N EAL + +M D ++ V VL A
Sbjct: 381 PLDARVIFETMPIKNVIIWNSMILGYAQNGEAEEALTLYERMLQENFKPDNISFVGVLSA 440
Query: 120 AAMAGDDNFG-KWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRD 178
G K Q LD Y + ++ + + G+ D A + MP+ D
Sbjct: 441 CINTNMVKEGRKHFDSISEQGMTPTLDHY--ACMIILLGRSGNIDKALDLIKGMPHK-PD 497
Query: 179 VVCWSVLVA 187
WS L++
Sbjct: 498 CRIWSALLS 506
>Medtr2g094420.1 | PPR containing plant-like protein | HC |
chr2:40258178-40258792 | 20130731
Length = 204
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 105/187 (56%), Gaps = 4/187 (2%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M + + PD TF +LK ++ + M+++ +FK GFD D F ++ ++ GF
Sbjct: 21 MHKAAIVPDSFTFSFVLKACARLNLFHLGMMMHSLVFKTGFDCDVFVKTNVVCFYSKCGF 80
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ A ++FD+ VK+I++WT +I G ++ EA+ F + +G D +V VLRA
Sbjct: 81 LKDAWKMFDDMVVKNIVSWTGMICGCIEFGKFREAVYLFRGLLESGLRPDGFVIVRVLRA 140
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
A GD + G+W+ G + + +V ++L+DMY KCG ++A VFD M +DV
Sbjct: 141 CARLGDLDSGRWIDRCLRDCG-LSRNVFVATSLVDMYTKCGSMEEARFVFDGMV--EKDV 197
Query: 180 VCWSVLV 186
VCWSV++
Sbjct: 198 VCWSVMI 204
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 94/179 (52%), Gaps = 4/179 (2%)
Query: 81 LINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAG 140
+I+G V D ++A+ + M D+ T VL+A A + G +H + G
Sbjct: 1 MIHGMVSKDRFNDAVHLYASMHKAAIVPDSFTFSFVLKACARLNLFHLGMMMHSLVFKTG 60
Query: 141 RVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIR 200
D +V + ++ Y KCG DA K+FD+M +++V W+ ++ G ++ KF++A+
Sbjct: 61 -FDCDVFVKTNVVCFYSKCGFLKDAWKMFDDMVV--KNIVSWTGMICGCIEFGKFREAVY 117
Query: 201 VFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
+F +L + P+ F + VL ACA G LD G+ + + + +S N V + T+LVDM
Sbjct: 118 LFRGLLESGLRPDGFVIVRVLRACARLGDLDSGRWIDRCLRDCGLSRN-VFVATSLVDM 175
>Medtr5g094220.1 | PPR containing plant-like protein | HC |
chr5:41149037-41146758 | 20130731
Length = 759
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 125/246 (50%), Gaps = 10/246 (4%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFA-GNALISAFANSG 58
MR + V P+ TFP++ ++ ++ ++A K+GF + A G++ +S ++
Sbjct: 101 MRSENVLPNHFTFPMVASSYAHFMMIRSGMNLHALACKVGFFPENSAVGSSFVSLYSRCD 160
Query: 59 FIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTG---TGVDALTVVS 115
+ A +VFDE V+D++AWTAL+ GYV+N L+C +M G +A T+
Sbjct: 161 EMNDAVKVFDEIPVRDVVAWTALVIGYVQNGESEMGLECISEMYRVGDDSQKPNARTLEG 220
Query: 116 VLRAAAMAGDDNFGKWVHGFYVQAG-RVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPY 174
A GD G+ +HG V+ G LD + S+++ MY KCG +A + F E+
Sbjct: 221 GFLACGNLGDLVSGRCLHGLVVKNGIGCLLD--IQSSVLSMYCKCGVPREAYQSFSEVI- 277
Query: 175 SYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGK 234
+D++ W+ ++ Y + D +R FW ML + V P+ + +LS +S + GK
Sbjct: 278 -NKDLLSWTSMIRVYARFGMMSDCVRFFWEMLENQVCPDGMVIGCILSGFGNSVDVYGGK 336
Query: 235 LVHQYI 240
H I
Sbjct: 337 AFHGLI 342
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 120/229 (52%), Gaps = 5/229 (2%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
I+ + K D N+LI + + + ++F+ S +D+I W ALI+ ++
Sbjct: 438 IHCNVIKGFVDETISVTNSLIEMYGKCDKMNVSWRIFNRSE-RDVILWNALISAHIHVKH 496
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
EA+ F M + T+V VL A + G+ +H + + G +L+ + +
Sbjct: 497 YEEAISLFDIMIMEDQNPNTATLVVVLSACSHLAFLEKGERLHRYINEKG-FKLNLPLGT 555
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV 210
AL+DMY KCG + + +VFD M +DV+CW+ +++GY + AI +F M NV
Sbjct: 556 ALVDMYAKCGQLEKSREVFDSM--MEKDVICWNAMISGYGMNGYAESAIEIFNLMEESNV 613
Query: 211 VPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
PNE T S+LSACAH+G +++GK V ++ V N ++ T +VD+
Sbjct: 614 KPNEITFLSLLSACAHAGLVEEGKNVFAKMQSYSVKPN-LKHYTCMVDL 661
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 89/213 (41%), Gaps = 7/213 (3%)
Query: 28 PFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVK 87
PF +A G + F LIS + S+ +F KD W + +
Sbjct: 30 PF--HAVTVTTGNSTNPFIAAKLISLYDTLNHPTSSSTLFHSLPFKDTFLWNSFLKTLFS 87
Query: 88 NDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGY 147
L + L + MRS + T V + A G +H + G +
Sbjct: 88 RSLYPQFLSFYSLMRSENVLPNHFTFPMVASSYAHFMMIRSGMNLHALACKVGFFPENSA 147
Query: 148 VWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQ---DAIRVFWN 204
V S+ + +Y +C +DA KVFDE+P RDVV W+ LV GYVQ + + + I +
Sbjct: 148 VGSSFVSLYSRCDEMNDAVKVFDEIP--VRDVVAWTALVIGYVQNGESEMGLECISEMYR 205
Query: 205 MLSDNVVPNEFTLTSVLSACAHSGALDQGKLVH 237
+ D+ PN TL AC + G L G+ +H
Sbjct: 206 VGDDSQKPNARTLEGGFLACGNLGDLVSGRCLH 238
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 87/190 (45%), Gaps = 4/190 (2%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTG 107
++++S + G A Q F E KD+++WT++I Y + + S+ ++ F +M
Sbjct: 254 SSVLSMYCKCGVPREAYQSFSEVINKDLLSWTSMIRVYARFGMMSDCVRFFWEMLENQVC 313
Query: 108 VDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACK 167
D + + +L + D GK HG ++ D V ++L+ MY K G A +
Sbjct: 314 PDGMVIGCILSGFGNSVDVYGGKAFHGLIIRR-HYAPDEMVDNSLLSMYCKFGMLSFAER 372
Query: 168 VFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHS 227
+F S + W+ ++ GY + K I++F M + + S +++C
Sbjct: 373 LFQR---SQGSIEYWNFMIVGYGRIGKNVKCIQLFREMQYLGIRSESVGIVSAIASCGQL 429
Query: 228 GALDQGKLVH 237
G ++ G+ +H
Sbjct: 430 GEINLGRSIH 439
>Medtr2g042550.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:18562024-18564318 | 20130731
Length = 740
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 125/249 (50%), Gaps = 17/249 (6%)
Query: 1 MRQKGVEPDQHTFPLLLKM--FSKPVVEDPFMIYAQIFK-LGFDLDRFAGNALISAFANS 57
+ K ++P+ TFP L K ++ +++ + K L D F +L++ +A
Sbjct: 241 LTNKNLQPNSFTFPSLFKACCSNQSWFHYGPLLHTHVLKFLQPPFDNFVQASLLNFYAKY 300
Query: 58 GFIGSACQVFDESSVKDIIAWTALINGYVKN-------------DLPSEALKCFVKMRST 104
G + + +FD + D+ W ++N Y ++ D E+L F M+
Sbjct: 301 GKMCVSRYIFDRINEPDLATWNVILNAYARSSSYHSYSNSFDDADFSLESLYLFRDMQVI 360
Query: 105 GTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDD 164
G + +T+V+++ A + G + G WVH F V +++++ +V +A +DMY KCG +
Sbjct: 361 GIRPNEVTIVALISACSNLGAVSQGFWVHCF-VLRNKIKMNRFVGTAFVDMYSKCGCLNL 419
Query: 165 ACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSAC 224
AC+VFD+MP + RD C++ ++ G+ A+ ++ M +VP+ T + AC
Sbjct: 420 ACQVFDKMPENDRDSFCYTAMIGGFAVHGYGNQALELYRKMKFKGLVPDSATFVVTMFAC 479
Query: 225 AHSGALDQG 233
+H G +++G
Sbjct: 480 SHVGLVEEG 488
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 116/248 (46%), Gaps = 24/248 (9%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGF-IGSACQVFDESSVKDIIAWTALINGYVKND 89
I+ QI G + + LI +S F + A ++F+ S I + LI+ +
Sbjct: 168 IHTQIITTGLSFQTYCLSHLIKI--SSKFNLPYAFKIFNYISNPTIFLYNTLISSLINQT 225
Query: 90 LPSE---ALKCFVK-MRSTGTGVDALTVVSVLRAAAMAGD-DNFGKWVHGFYVQAGRVQL 144
++ A + K + + ++ T S+ +A ++G +H ++ +
Sbjct: 226 NQNQIHLAFSLYNKILTNKNLQPNSFTFPSLFKACCSNQSWFHYGPLLHTHVLKFLQPPF 285
Query: 145 DGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNK-------FQD 197
D +V ++L++ Y K G + +FD + + D+ W+V++ Y + + F D
Sbjct: 286 DNFVQASLLNFYAKYGKMCVSRYIFDRI--NEPDLATWNVILNAYARSSSYHSYSNSFDD 343
Query: 198 A------IRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVE 251
A + +F +M + PNE T+ +++SAC++ GA+ QG VH ++ K+ +N
Sbjct: 344 ADFSLESLYLFRDMQVIGIRPNEVTIVALISACSNLGAVSQGFWVHCFVLRNKIKMNRF- 402
Query: 252 LGTALVDM 259
+GTA VDM
Sbjct: 403 VGTAFVDM 410
>Medtr4g094402.5 | pentatricopeptide (PPR) repeat protein | HC |
chr4:37900455-37904049 | 20130731
Length = 654
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 103/192 (53%), Gaps = 3/192 (1%)
Query: 43 DRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMR 102
D + N++IS F+ G + + F+ K++I+W ++I GY KN+ A++ F +M+
Sbjct: 338 DVLSWNSIISGFSQIGDLKRVKEFFENMPHKNLISWNSVIAGYEKNEDYKGAIELFSQMQ 397
Query: 103 STGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHC 162
G D T+ S+L + D GK +H F + V D + ++L+ MY +CG
Sbjct: 398 LKGERPDRHTLSSILSVSTGLVDLYLGKQIHQFVTKT--VVPDLPINNSLITMYSRCGEI 455
Query: 163 DDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLS 222
DA VF+EM Y+DV+ W+ ++ GY A+ +F M + P T SVL+
Sbjct: 456 GDARHVFNEMKL-YKDVITWNAMIGGYAFHGFAAQALELFERMKGLKIQPTYITFISVLN 514
Query: 223 ACAHSGALDQGK 234
ACAH+G +++GK
Sbjct: 515 ACAHAGLVEEGK 526
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 91/197 (46%), Gaps = 7/197 (3%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPFMIYAQIFKLGFDL---DRFAGNALISAFANS 57
M+ KG PD+HT +L + + V + QI + D N+LI+ ++
Sbjct: 396 MQLKGERPDRHTLSSILSVSTGLV---DLYLGKQIHQFVTKTVVPDLPINNSLITMYSRC 452
Query: 58 GFIGSACQVFDESSV-KDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSV 116
G IG A VF+E + KD+I W A+I GY + ++AL+ F +M+ +T +SV
Sbjct: 453 GEIGDARHVFNEMKLYKDVITWNAMIGGYAFHGFAAQALELFERMKGLKIQPTYITFISV 512
Query: 117 LRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSY 176
L A A AG GK + ++ +++L+D+ + G +A + MP
Sbjct: 513 LNACAHAGLVEEGKRQFNSMINDYGIEPRVEHFASLVDILGRQGQLQEAMDLIVNMPVKP 572
Query: 177 RDVVCWSVLVAGYVQCN 193
V ++L A V N
Sbjct: 573 DKAVWGALLGACRVHSN 589
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 92/212 (43%), Gaps = 44/212 (20%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTG 107
N+++ + +G + SA ++FD +D +W +I GYV+ EA K F++M
Sbjct: 281 NSMMMCYVKAGDVVSARELFDRMVERDACSWNTVIGGYVQIGDMEEASKLFLEM------ 334
Query: 108 VDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACK 167
+ VL W++++ + + G +
Sbjct: 335 ----PIPDVLS------------------------------WNSIISGFSQIGDLKRVKE 360
Query: 168 VFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHS 227
F+ MP+ ++++ W+ ++AGY + ++ AI +F M P+ TL+S+LS
Sbjct: 361 FFENMPH--KNLISWNSVIAGYEKNEDYKGAIELFSQMQLKGERPDRHTLSSILSVSTGL 418
Query: 228 GALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
L GK +HQ++ K + + + +L+ M
Sbjct: 419 VDLYLGKQIHQFV--TKTVVPDLPINNSLITM 448
>Medtr4g094402.4 | pentatricopeptide (PPR) repeat protein | HC |
chr4:37900455-37904049 | 20130731
Length = 654
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 103/192 (53%), Gaps = 3/192 (1%)
Query: 43 DRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMR 102
D + N++IS F+ G + + F+ K++I+W ++I GY KN+ A++ F +M+
Sbjct: 338 DVLSWNSIISGFSQIGDLKRVKEFFENMPHKNLISWNSVIAGYEKNEDYKGAIELFSQMQ 397
Query: 103 STGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHC 162
G D T+ S+L + D GK +H F + V D + ++L+ MY +CG
Sbjct: 398 LKGERPDRHTLSSILSVSTGLVDLYLGKQIHQFVTKT--VVPDLPINNSLITMYSRCGEI 455
Query: 163 DDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLS 222
DA VF+EM Y+DV+ W+ ++ GY A+ +F M + P T SVL+
Sbjct: 456 GDARHVFNEMKL-YKDVITWNAMIGGYAFHGFAAQALELFERMKGLKIQPTYITFISVLN 514
Query: 223 ACAHSGALDQGK 234
ACAH+G +++GK
Sbjct: 515 ACAHAGLVEEGK 526
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 91/197 (46%), Gaps = 7/197 (3%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPFMIYAQIFKLGFDL---DRFAGNALISAFANS 57
M+ KG PD+HT +L + + V + QI + D N+LI+ ++
Sbjct: 396 MQLKGERPDRHTLSSILSVSTGLV---DLYLGKQIHQFVTKTVVPDLPINNSLITMYSRC 452
Query: 58 GFIGSACQVFDESSV-KDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSV 116
G IG A VF+E + KD+I W A+I GY + ++AL+ F +M+ +T +SV
Sbjct: 453 GEIGDARHVFNEMKLYKDVITWNAMIGGYAFHGFAAQALELFERMKGLKIQPTYITFISV 512
Query: 117 LRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSY 176
L A A AG GK + ++ +++L+D+ + G +A + MP
Sbjct: 513 LNACAHAGLVEEGKRQFNSMINDYGIEPRVEHFASLVDILGRQGQLQEAMDLIVNMPVKP 572
Query: 177 RDVVCWSVLVAGYVQCN 193
V ++L A V N
Sbjct: 573 DKAVWGALLGACRVHSN 589
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 92/212 (43%), Gaps = 44/212 (20%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTG 107
N+++ + +G + SA ++FD +D +W +I GYV+ EA K F++M
Sbjct: 281 NSMMMCYVKAGDVVSARELFDRMVERDACSWNTVIGGYVQIGDMEEASKLFLEM------ 334
Query: 108 VDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACK 167
+ VL W++++ + + G +
Sbjct: 335 ----PIPDVLS------------------------------WNSIISGFSQIGDLKRVKE 360
Query: 168 VFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHS 227
F+ MP+ ++++ W+ ++AGY + ++ AI +F M P+ TL+S+LS
Sbjct: 361 FFENMPH--KNLISWNSVIAGYEKNEDYKGAIELFSQMQLKGERPDRHTLSSILSVSTGL 418
Query: 228 GALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
L GK +HQ++ K + + + +L+ M
Sbjct: 419 VDLYLGKQIHQFV--TKTVVPDLPINNSLITM 448
>Medtr4g094402.3 | pentatricopeptide (PPR) repeat protein | HC |
chr4:37900455-37904066 | 20130731
Length = 654
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 103/192 (53%), Gaps = 3/192 (1%)
Query: 43 DRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMR 102
D + N++IS F+ G + + F+ K++I+W ++I GY KN+ A++ F +M+
Sbjct: 338 DVLSWNSIISGFSQIGDLKRVKEFFENMPHKNLISWNSVIAGYEKNEDYKGAIELFSQMQ 397
Query: 103 STGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHC 162
G D T+ S+L + D GK +H F + V D + ++L+ MY +CG
Sbjct: 398 LKGERPDRHTLSSILSVSTGLVDLYLGKQIHQFVTKT--VVPDLPINNSLITMYSRCGEI 455
Query: 163 DDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLS 222
DA VF+EM Y+DV+ W+ ++ GY A+ +F M + P T SVL+
Sbjct: 456 GDARHVFNEMKL-YKDVITWNAMIGGYAFHGFAAQALELFERMKGLKIQPTYITFISVLN 514
Query: 223 ACAHSGALDQGK 234
ACAH+G +++GK
Sbjct: 515 ACAHAGLVEEGK 526
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 91/197 (46%), Gaps = 7/197 (3%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPFMIYAQIFKLGFDL---DRFAGNALISAFANS 57
M+ KG PD+HT +L + + V + QI + D N+LI+ ++
Sbjct: 396 MQLKGERPDRHTLSSILSVSTGLV---DLYLGKQIHQFVTKTVVPDLPINNSLITMYSRC 452
Query: 58 GFIGSACQVFDESSV-KDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSV 116
G IG A VF+E + KD+I W A+I GY + ++AL+ F +M+ +T +SV
Sbjct: 453 GEIGDARHVFNEMKLYKDVITWNAMIGGYAFHGFAAQALELFERMKGLKIQPTYITFISV 512
Query: 117 LRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSY 176
L A A AG GK + ++ +++L+D+ + G +A + MP
Sbjct: 513 LNACAHAGLVEEGKRQFNSMINDYGIEPRVEHFASLVDILGRQGQLQEAMDLIVNMPVKP 572
Query: 177 RDVVCWSVLVAGYVQCN 193
V ++L A V N
Sbjct: 573 DKAVWGALLGACRVHSN 589
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 92/212 (43%), Gaps = 44/212 (20%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTG 107
N+++ + +G + SA ++FD +D +W +I GYV+ EA K F++M
Sbjct: 281 NSMMMCYVKAGDVVSARELFDRMVERDACSWNTVIGGYVQIGDMEEASKLFLEM------ 334
Query: 108 VDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACK 167
+ VL W++++ + + G +
Sbjct: 335 ----PIPDVLS------------------------------WNSIISGFSQIGDLKRVKE 360
Query: 168 VFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHS 227
F+ MP+ ++++ W+ ++AGY + ++ AI +F M P+ TL+S+LS
Sbjct: 361 FFENMPH--KNLISWNSVIAGYEKNEDYKGAIELFSQMQLKGERPDRHTLSSILSVSTGL 418
Query: 228 GALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
L GK +HQ++ K + + + +L+ M
Sbjct: 419 VDLYLGKQIHQFV--TKTVVPDLPINNSLITM 448
>Medtr4g094402.2 | pentatricopeptide (PPR) repeat protein | HC |
chr4:37900455-37904049 | 20130731
Length = 654
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 103/192 (53%), Gaps = 3/192 (1%)
Query: 43 DRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMR 102
D + N++IS F+ G + + F+ K++I+W ++I GY KN+ A++ F +M+
Sbjct: 338 DVLSWNSIISGFSQIGDLKRVKEFFENMPHKNLISWNSVIAGYEKNEDYKGAIELFSQMQ 397
Query: 103 STGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHC 162
G D T+ S+L + D GK +H F + V D + ++L+ MY +CG
Sbjct: 398 LKGERPDRHTLSSILSVSTGLVDLYLGKQIHQFVTKT--VVPDLPINNSLITMYSRCGEI 455
Query: 163 DDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLS 222
DA VF+EM Y+DV+ W+ ++ GY A+ +F M + P T SVL+
Sbjct: 456 GDARHVFNEMKL-YKDVITWNAMIGGYAFHGFAAQALELFERMKGLKIQPTYITFISVLN 514
Query: 223 ACAHSGALDQGK 234
ACAH+G +++GK
Sbjct: 515 ACAHAGLVEEGK 526
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 91/197 (46%), Gaps = 7/197 (3%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPFMIYAQIFKLGFDL---DRFAGNALISAFANS 57
M+ KG PD+HT +L + + V + QI + D N+LI+ ++
Sbjct: 396 MQLKGERPDRHTLSSILSVSTGLV---DLYLGKQIHQFVTKTVVPDLPINNSLITMYSRC 452
Query: 58 GFIGSACQVFDESSV-KDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSV 116
G IG A VF+E + KD+I W A+I GY + ++AL+ F +M+ +T +SV
Sbjct: 453 GEIGDARHVFNEMKLYKDVITWNAMIGGYAFHGFAAQALELFERMKGLKIQPTYITFISV 512
Query: 117 LRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSY 176
L A A AG GK + ++ +++L+D+ + G +A + MP
Sbjct: 513 LNACAHAGLVEEGKRQFNSMINDYGIEPRVEHFASLVDILGRQGQLQEAMDLIVNMPVKP 572
Query: 177 RDVVCWSVLVAGYVQCN 193
V ++L A V N
Sbjct: 573 DKAVWGALLGACRVHSN 589
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 92/212 (43%), Gaps = 44/212 (20%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTG 107
N+++ + +G + SA ++FD +D +W +I GYV+ EA K F++M
Sbjct: 281 NSMMMCYVKAGDVVSARELFDRMVERDACSWNTVIGGYVQIGDMEEASKLFLEM------ 334
Query: 108 VDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACK 167
+ VL W++++ + + G +
Sbjct: 335 ----PIPDVLS------------------------------WNSIISGFSQIGDLKRVKE 360
Query: 168 VFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHS 227
F+ MP+ ++++ W+ ++AGY + ++ AI +F M P+ TL+S+LS
Sbjct: 361 FFENMPH--KNLISWNSVIAGYEKNEDYKGAIELFSQMQLKGERPDRHTLSSILSVSTGL 418
Query: 228 GALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
L GK +HQ++ K + + + +L+ M
Sbjct: 419 VDLYLGKQIHQFV--TKTVVPDLPINNSLITM 448
>Medtr2g087110.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:36615461-36616774 | 20130731
Length = 316
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 75/245 (30%), Positives = 123/245 (50%), Gaps = 3/245 (1%)
Query: 15 LLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKD 74
LL K FS + +I+A+ +LG D F L+S +A+ + A +F ++ K
Sbjct: 14 LLNKCFSSKNINSLKIIHARTIRLGISHDDFIRTKLVSCYASCSKLHQANILFSFTNRKP 73
Query: 75 IIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHG 134
+ +LI Y+ +L E L F +MR + D T+ VL++ A GK VHG
Sbjct: 74 TFLYNSLIRAYLSLNLFKETLSIFREMRLSYKPFDCHTLPLVLKSCAGLSALRLGKQVHG 133
Query: 135 FYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNK 194
+ G LD +AL++MY KCG + A KVFD M R+ V WS ++AGY +
Sbjct: 134 AVLVNG-FALDLKNSNALINMYAKCGELEFARKVFDGM--CERNEVTWSTMMAGYGMHGR 190
Query: 195 FQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGT 254
F++ +F M+ + + T VL+AC+H G +++G+ + + ++ + V T
Sbjct: 191 FEEVFEMFNRMVEVGERMDNVSFTVVLTACSHGGFVEKGREIFEMMKVRFGVKPDVRHYT 250
Query: 255 ALVDM 259
+VDM
Sbjct: 251 CMVDM 255
>Medtr1g040585.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:15028593-15026470 | 20130731
Length = 571
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 120/259 (46%), Gaps = 44/259 (16%)
Query: 45 FAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRST 104
F GNAL+ +A G + A +V++ KD++ W A++ GY +N +AL F KMR
Sbjct: 43 FVGNALVDMYAKCGKMEDASKVYERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREE 102
Query: 105 GTGVDALTVVSVLRAAA------------------------------MAGDDNFGKWVHG 134
+D +T SV+ A ++G + G +HG
Sbjct: 103 RIELDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCSCRPNVVTLMSLLSGCASVGALLHG 162
Query: 135 FYVQAGRVQL-----------DGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWS 183
++ D +AL+DMY KC + A +FDE+ RDVV W+
Sbjct: 163 KETHCYSIKFILKGEHNDDNDDLAGINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWT 222
Query: 184 VLVAGYVQCNKFQDAIRVFWNMLS-DN-VVPNEFTLTSVLSACAHSGALDQGKLVHQYI- 240
V++ GY Q A+++F M DN +VPN+FT++ VL ACA AL GK +H Y+
Sbjct: 223 VMIGGYAQYGDANHALQLFSEMFKFDNCIVPNDFTISCVLMACARLAALRFGKQIHAYVL 282
Query: 241 ECKKVSLNSVELGTALVDM 259
++ + + + L+DM
Sbjct: 283 RRSRIDSDVLFVANCLIDM 301
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/199 (35%), Positives = 103/199 (51%), Gaps = 8/199 (4%)
Query: 41 DLDRFAG-NALISAFANSGFIGSACQVFDESSVKD--IIAWTALINGYVKNDLPSEALKC 97
D D AG NALI +A + A +FDE KD ++ WT +I GY + + AL+
Sbjct: 181 DNDDLAGINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQYGDANHALQL 240
Query: 98 FVKMRSTGTGV--DALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDG-YVWSALMD 154
F +M + + T+ VL A A FGK +H + ++ R+ D +V + L+D
Sbjct: 241 FSEMFKFDNCIVPNDFTISCVLMACARLAALRFGKQIHAYVLRRSRIDSDVLFVANCLID 300
Query: 155 MYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNE 214
MY K G D A VFD M S R+ + W+ L+ GY +DA RVF M + +V +
Sbjct: 301 MYSKSGDVDTAQVVFDSM--SKRNAISWTSLLTGYGMHGCSEDAFRVFDEMRKEALVLDG 358
Query: 215 FTLTSVLSACAHSGALDQG 233
T VL AC+HSG +D+G
Sbjct: 359 ITFLVVLYACSHSGMVDRG 377
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 76/151 (50%), Gaps = 4/151 (2%)
Query: 45 FAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRST 104
F N LI ++ SG + +A VFD S ++ I+WT+L+ GY + +A + F +MR
Sbjct: 293 FVANCLIDMYSKSGDVDTAQVVFDSMSKRNAISWTSLLTGYGMHGCSEDAFRVFDEMRKE 352
Query: 105 GTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYV--WSALMDMYFKCGHC 162
+D +T + VL A + +G + G + FY + +D V ++ + D++ + G
Sbjct: 353 ALVLDGITFLVVLYACSHSGMVDRG--IDLFYRMSKDFVVDPGVEHYACMADLFGRAGRL 410
Query: 163 DDACKVFDEMPYSYRDVVCWSVLVAGYVQCN 193
+A ++ ++M VV ++L A N
Sbjct: 411 CEATRLINDMSMEPTPVVWIALLSACRTHSN 441
>Medtr1g111670.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:50487581-50485585 | 20130731
Length = 630
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 116/228 (50%), Gaps = 4/228 (1%)
Query: 32 YAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLP 91
+AQ +GF+ D N LI+ ++ + A VFDE VK +++W +I +
Sbjct: 79 HAQFILVGFETDILTSNMLINMYSKCSLVHDARIVFDEMPVKSVVSWNTMIGALTRIAKE 138
Query: 92 SEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSA 151
EAL F++M GT + T+ SVL A +H F ++ V + +V +A
Sbjct: 139 QEALMLFIQMLREGTLFNEFTISSVLCECAFKCAILECMQLHAFSIKVS-VDSNCFVGTA 197
Query: 152 LMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVV 211
L+ +Y KC DA K+F+ MP + + V WS ++AGYVQ + A+ +F +
Sbjct: 198 LLHVYAKCSSIKDASKMFESMPET--NAVTWSSILAGYVQNGLHEAALLLFRDYQLMGFE 255
Query: 212 PNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
+ F ++S + ACA L +GK VH I CK +++ + ++L+DM
Sbjct: 256 QDAFLISSAVCACAGLATLIEGKQVHA-ISCKSGFGSNIYVTSSLIDM 302
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 110/220 (50%), Gaps = 6/220 (2%)
Query: 22 KPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTAL 81
K + + ++A K+ D + F G AL+ +A I A ++F+ + + W+++
Sbjct: 170 KCAILECMQLHAFSIKVSVDSNCFVGTALLHVYAKCSSIKDASKMFESMPETNAVTWSSI 229
Query: 82 INGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGR 141
+ GYV+N L AL F + G DA + S + A A GK VH ++G
Sbjct: 230 LAGYVQNGLHEAALLLFRDYQLMGFEQDAFLISSAVCACAGLATLIEGKQVHAISCKSG- 288
Query: 142 VQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRV 201
+ YV S+L+DMY KCG +A VF R +V W+ +++G+ + +A+ +
Sbjct: 289 FGSNIYVTSSLIDMYAKCGCIREAYIVFQ--GEELRSIVLWNAMISGFGRHACALEAMIL 346
Query: 202 FWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIE 241
F M + P++ T SVL+AC+H G +QG H+Y +
Sbjct: 347 FEKMQQRGLFPDDVTYVSVLNACSHMGLHEQG---HKYFD 383
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 92/195 (47%), Gaps = 3/195 (1%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
++A K GF + + ++LI +A G I A VF ++ I+ W A+I+G+ ++
Sbjct: 280 VHAISCKSGFGSNIYVTSSLIDMYAKCGCIREAYIVFQGEELRSIVLWNAMISGFGRHAC 339
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
EA+ F KM+ G D +T VSVL A + G G V+ ++ +S
Sbjct: 340 ALEAMILFEKMQQRGLFPDDVTYVSVLNACSHMGLHEQGHKYFDLMVREHNLRPSVLHYS 399
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCN-KFQD-AIRVFWNMLSD 208
++D+ + G A + + MP+S + S+L + + N +F + A + + M D
Sbjct: 400 CMVDILGRAGLVHKAYDLIERMPFSATSSIWGSLLASCRIHGNIEFAEIAAKHLFEMEPD 459
Query: 209 NVVPNEFTLTSVLSA 223
N N L ++ +A
Sbjct: 460 N-AGNHVLLANIYAA 473
>Medtr4g113240.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:46542320-46539266 | 20130731
Length = 1017
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 116/235 (49%), Gaps = 5/235 (2%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M Q G P++ TF +L S V+ I+A I K D NAL++ +
Sbjct: 533 MMQAGWRPNRVTFINILAAVSSFSVLGLGHQIHALILKYSVADDNAIENALLAFYGKCEQ 592
Query: 60 IGSACQVFDE-SSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLR 118
+ +F S +D ++W ++I+GY+ + + +A+ M G +D T +VL
Sbjct: 593 MEDCEIIFSRMSERRDEVSWNSMISGYLHSGILHKAMDLVWPMMQRGQKLDGFTFATVLS 652
Query: 119 AAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRD 178
A A G VH V+A ++ D V SAL+DMY KCG D A + F+ MP R+
Sbjct: 653 ACASVATLERGMEVHACAVRAC-LESDVVVGSALVDMYAKCGKIDYASRFFELMPV--RN 709
Query: 179 VVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
+ W+ +++GY + Q A+++F M P+ T VLSAC+H G +D+G
Sbjct: 710 IYSWNSMISGYARHGHGQKALKIFTRMKQHGQSPDHVTFVGVLSACSHVGLVDEG 764
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 109/204 (53%), Gaps = 10/204 (4%)
Query: 27 DPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYV 86
D ++ Q++K GF D F N LI+ + G + SA ++FDE K++++W+ LI+GY
Sbjct: 41 DANHLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISGYT 100
Query: 87 KNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDD--NFGKWVHGFYVQAGRVQL 144
+N +P EA F + S+G + V S LRA G G +H F + V
Sbjct: 101 QNRMPDEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLPCVS- 159
Query: 145 DGYVWSALMDMYFKC-GHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFW 203
D + + LM MY C G DDA +VFDE+ +R+ V W+ +++ Y + A ++F
Sbjct: 160 DMILSNVLMSMYSDCSGSIDDAHRVFDEIK--FRNSVTWNSIISVYCRRGDAVSAFKLFS 217
Query: 204 NMLSD----NVVPNEFTLTSVLSA 223
M + N+ PNE+TL S+++A
Sbjct: 218 VMQMEGVELNLRPNEYTLCSLVTA 241
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 110/211 (52%), Gaps = 7/211 (3%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
+ +I K GF D + G+AL++ FA G + A +F + ++ + L+ G +
Sbjct: 256 MLTRIEKSGFLRDLYVGSALVNGFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQ 315
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRA----AAMAGDDNFGKWVHGFYVQAGRVQLDG 146
EA K F +M+ +++ ++V +L + + G+ VH + ++G V
Sbjct: 316 GEEAAKVFKEMKDL-VEINSESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLVDARI 374
Query: 147 YVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNML 206
+ +AL++MY KC D+AC VF MP +D V W+ +++G +F++A+ F M
Sbjct: 375 SIGNALVNMYGKCTAIDNACSVFQLMP--SKDTVSWNSMISGLDHNERFEEAVSCFHTMK 432
Query: 207 SDNVVPNEFTLTSVLSACAHSGALDQGKLVH 237
+ +VP+ F++ S LS+C+ G L G+ +H
Sbjct: 433 RNGMVPSNFSVISTLSSCSSLGWLTLGRQIH 463
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 112/230 (48%), Gaps = 4/230 (1%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
I+ + FK G DLD NAL++ +A + I +VF + D ++W + I K +
Sbjct: 462 IHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMPEYDQVSWNSFIGALAKYEA 521
Query: 91 PS-EALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVW 149
+ALK F++M G + +T +++L A + G +H ++ V D +
Sbjct: 522 SVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGLGHQIHALILKYS-VADDNAIE 580
Query: 150 SALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDN 209
+AL+ Y KC +D +F M RD V W+ +++GY+ A+ + W M+
Sbjct: 581 NALLAFYGKCEQMEDCEIIFSRMS-ERRDEVSWNSMISGYLHSGILHKAMDLVWPMMQRG 639
Query: 210 VVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
+ FT +VLSACA L++G VH + + V +G+ALVDM
Sbjct: 640 QKLDGFTFATVLSACASVATLERGMEVHA-CAVRACLESDVVVGSALVDM 688
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 112/242 (46%), Gaps = 10/242 (4%)
Query: 6 VEPDQHTFPLLLKMFS-----KPVVEDPFMIYAQIFKLGFDLDRFA-GNALISAFANSGF 59
VE + + +LL F+ K ++A +F+ G R + GNAL++ +
Sbjct: 330 VEINSESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTA 389
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
I +AC VF KD ++W ++I+G N+ EA+ CF M+ G +V+S L +
Sbjct: 390 IDNACSVFQLMPSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSS 449
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
+ G G+ +HG + G + LD V +AL+ +Y + ++ KVF +MP D
Sbjct: 450 CSSLGWLTLGRQIHGEGFKWG-LDLDVSVSNALLTLYAETDSINECQKVFFQMP--EYDQ 506
Query: 180 VCWSVLVAGYVQCN-KFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQ 238
V W+ + + A++ F M+ PN T ++L+A + L G +H
Sbjct: 507 VSWNSFIGALAKYEASVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGLGHQIHA 566
Query: 239 YI 240
I
Sbjct: 567 LI 568
>Medtr0013s0120.1 | pentatricopeptide (PPR) repeat protein | HC |
scaffold0013:48776-47089 | 20130731
Length = 558
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 117/229 (51%), Gaps = 3/229 (1%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
+++Q+ + GFD D L+ +A +GFI A +VFDE +DI +W A+I+G +
Sbjct: 107 LHSQVLRFGFDADVLLLTTLLDVYAKTGFIDYARKVFDEMDKRDIASWNAMISGLAQGSR 166
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
P EA+ F +M+ G + +TV+ L A + G G+ VH YV ++ + V +
Sbjct: 167 PDEAIALFNRMKEEGWRPNDVTVLGALSACSQLGALKEGEIVHR-YVLDEKLDRNVIVCN 225
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV 210
A++DM+ KCG D A VF+ M + ++ W+ ++ + A+ + M D
Sbjct: 226 AVIDMFAKCGFVDKAYSVFESMS-CRKSLITWNTMIMAFAMNGDGYKALDLLDRMSLDGT 284
Query: 211 VPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
P+ + L AC H+G +D+G + ++ V LN G+ +VD+
Sbjct: 285 CPDAVSYLGALCACNHAGLVDEGVRLFDLMKVSGVKLNVKHYGS-MVDL 332
>Medtr4g094402.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:37900570-37903619 | 20130731
Length = 662
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 103/192 (53%), Gaps = 3/192 (1%)
Query: 43 DRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMR 102
D + N++IS F+ G + + F+ K++I+W ++I GY KN+ A++ F +M+
Sbjct: 264 DVLSWNSIISGFSQIGDLKRVKEFFENMPHKNLISWNSVIAGYEKNEDYKGAIELFSQMQ 323
Query: 103 STGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHC 162
G D T+ S+L + D GK +H F + V D + ++L+ MY +CG
Sbjct: 324 LKGERPDRHTLSSILSVSTGLVDLYLGKQIHQFVTKT--VVPDLPINNSLITMYSRCGEI 381
Query: 163 DDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLS 222
DA VF+EM Y+DV+ W+ ++ GY A+ +F M + P T SVL+
Sbjct: 382 GDARHVFNEMKL-YKDVITWNAMIGGYAFHGFAAQALELFERMKGLKIQPTYITFISVLN 440
Query: 223 ACAHSGALDQGK 234
ACAH+G +++GK
Sbjct: 441 ACAHAGLVEEGK 452
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 91/197 (46%), Gaps = 7/197 (3%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPFMIYAQIFKLGFDL---DRFAGNALISAFANS 57
M+ KG PD+HT +L + + V + QI + D N+LI+ ++
Sbjct: 322 MQLKGERPDRHTLSSILSVSTGLV---DLYLGKQIHQFVTKTVVPDLPINNSLITMYSRC 378
Query: 58 GFIGSACQVFDESSV-KDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSV 116
G IG A VF+E + KD+I W A+I GY + ++AL+ F +M+ +T +SV
Sbjct: 379 GEIGDARHVFNEMKLYKDVITWNAMIGGYAFHGFAAQALELFERMKGLKIQPTYITFISV 438
Query: 117 LRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSY 176
L A A AG GK + ++ +++L+D+ + G +A + MP
Sbjct: 439 LNACAHAGLVEEGKRQFNSMINDYGIEPRVEHFASLVDILGRQGQLQEAMDLIVNMPVKP 498
Query: 177 RDVVCWSVLVAGYVQCN 193
V ++L A V N
Sbjct: 499 DKAVWGALLGACRVHSN 515
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 92/212 (43%), Gaps = 44/212 (20%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTG 107
N+++ + +G + SA ++FD +D +W +I GYV+ EA K F++M
Sbjct: 207 NSMMMCYVKAGDVVSARELFDRMVERDACSWNTVIGGYVQIGDMEEASKLFLEM------ 260
Query: 108 VDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACK 167
+ VL W++++ + + G +
Sbjct: 261 ----PIPDVLS------------------------------WNSIISGFSQIGDLKRVKE 286
Query: 168 VFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHS 227
F+ MP+ ++++ W+ ++AGY + ++ AI +F M P+ TL+S+LS
Sbjct: 287 FFENMPH--KNLISWNSVIAGYEKNEDYKGAIELFSQMQLKGERPDRHTLSSILSVSTGL 344
Query: 228 GALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
L GK +HQ++ K + + + +L+ M
Sbjct: 345 VDLYLGKQIHQFV--TKTVVPDLPINNSLITM 374
>Medtr7g074040.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:27639852-27642151 | 20130731
Length = 707
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 112/214 (52%), Gaps = 3/214 (1%)
Query: 46 AGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTG 105
A N +I F +G + A +F+ +D W A+I + + L EAL F +M+ G
Sbjct: 271 ACNEMILQFGLAGEMHRARMMFEGMKERDEGTWNAMIKVFERKGLDLEALGLFARMQREG 330
Query: 106 TGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDA 165
++ +++SVL A + G+ VH V++ Q D YV S L+ MY KCG A
Sbjct: 331 VALNFPSMISVLSVCASLASLDHGRQVHARLVRSEFDQ-DLYVASVLITMYVKCGDLVRA 389
Query: 166 CKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACA 225
+F+ + ++DVV W+ ++ GY Q ++A+ VF +M S V P+E T VLSAC+
Sbjct: 390 KGIFNR--FLFKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVQPDEVTFIGVLSACS 447
Query: 226 HSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
+SG + +G + + ++C +E +VD+
Sbjct: 448 YSGKVKEGFEIFEAMKCTYQVEPGIEHYACMVDL 481
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 91/206 (44%), Gaps = 25/206 (12%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTG 107
N +IS + +G + A +VFD +++++WT+++ GYV+ + EA K F +M
Sbjct: 87 NGMISGYVKNGMVADARKVFDVMPERNVVSWTSMVRGYVQEGMVEEAEKLFWEMPRRNVV 146
Query: 108 VDALTVVSVLRAAAMAGDDNFGKWVH-----------GFYVQAGRVQ-----------LD 145
+ + +L+ + + + G Y Q GR+ +
Sbjct: 147 SWTVMIGGLLKESRIDDAKKLFDMIPEKDVVVVTNMIGGYCQVGRLDEARELFDEMKVRN 206
Query: 146 GYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNM 205
+ W+ ++ Y K G D A K+F+ MP R+ V W+ ++ GY Q + ++A +F M
Sbjct: 207 VFTWTTMVSGYAKNGRVDVARKLFEVMP--ERNEVSWTAMLMGYTQSGRMKEAFELFEAM 264
Query: 206 LSDNVVP-NEFTLTSVLSACAHSGAL 230
+V NE L L+ H +
Sbjct: 265 PVKWIVACNEMILQFGLAGEMHRARM 290
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 79/157 (50%), Gaps = 1/157 (0%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
++A++ + FD D + + LI+ + G + A +F+ KD++ W ++I GY ++ L
Sbjct: 357 VHARLVRSEFDQDLYVASVLITMYVKCGDLVRAKGIFNRFLFKDVVMWNSMITGYSQHGL 416
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
EAL F M S+G D +T + VL A + +G G + +V+ ++
Sbjct: 417 GEEALNVFHDMCSSGVQPDEVTFIGVLSACSYSGKVKEGFEIFEAMKCTYQVEPGIEHYA 476
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVA 187
++D+ + G D+A ++ ++MP D + W L+
Sbjct: 477 CMVDLLGRAGRVDEAMELVEKMPME-PDAIVWGALLG 512
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 102/218 (46%), Gaps = 38/218 (17%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTG 107
NA++SA+ S A +FD+ ++ +++ +I+GYVKN + ++A K F
Sbjct: 56 NAMVSAYFESHKPRDALLLFDQMPQRNTVSFNGMISGYVKNGMVADARKVF--------- 106
Query: 108 VDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQ-----------LDGYVWSALMDMY 156
D + +V+ +M V G YVQ G V+ + W+ ++
Sbjct: 107 -DVMPERNVVSWTSM---------VRG-YVQEGMVEEAEKLFWEMPRRNVVSWTVMIGGL 155
Query: 157 FKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFT 216
K DDA K+FD +P +DVV + ++ GY Q + +A +F M NV FT
Sbjct: 156 LKESRIDDAKKLFDMIP--EKDVVVVTNMIGGYCQVGRLDEARELFDEMKVRNV----FT 209
Query: 217 LTSVLSACAHSGALDQG-KLVHQYIECKKVSLNSVELG 253
T+++S A +G +D KL E +VS ++ +G
Sbjct: 210 WTTMVSGYAKNGRVDVARKLFEVMPERNEVSWTAMLMG 247
>Medtr4g087150.1 | PPR containing plant-like protein | HC |
chr4:34147385-34144072 | 20130731
Length = 724
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 112/215 (52%), Gaps = 8/215 (3%)
Query: 48 NALISAFANSGFIGSACQVFDESS-VKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGT 106
N +I+ ++ +G + A ++FD++ ++ + W ++++GY+ N SEALK +V MR
Sbjct: 370 NTMITVYSKNGELDEAVKLFDKTKGERNCVTWNSMMSGYIHNGEHSEALKLYVTMRRFLV 429
Query: 107 GVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDAC 166
T + RA A G+ +H ++ Q + YV +AL+D Y KCGH DA
Sbjct: 430 EYSRSTFSVLFRACAYLCSFQQGQLLHA-HLAKTPYQENVYVGTALVDFYSKCGHLADAQ 488
Query: 167 KVFDEM--PYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSAC 224
+ F + P +V W+ L+ GY +AI F +ML VVPN T +VLSAC
Sbjct: 489 RSFTSIFSP----NVAAWTALINGYAYHGCGSEAISRFRSMLDQGVVPNAATFVAVLSAC 544
Query: 225 AHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
+H+G +D+G ++ ++E T +VD+
Sbjct: 545 SHAGLVDEGLKFFHSMQINYRITPTIEHYTCVVDL 579
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 101/225 (44%), Gaps = 40/225 (17%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTG 107
N I+ A +G + A +FDE ++ + +W +I+GY + +EAL M S+
Sbjct: 41 NISIAHHAKTGKLVEARHMFDEMPLRTVSSWNTMISGYSQWGKYTEALTLVSFMHSSCVK 100
Query: 108 VDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACK 167
+ ++ + L A G GK +H ++G Q G V SAL+ Y +C +A
Sbjct: 101 FNEVSFSACLSACTRGGSLFLGKQIHSLLFKSG-YQRFGPVGSALLHYYVQCCGIREAEM 159
Query: 168 VFDEMPYSYRDV--VCWSVLVAGYVQCNKFQDAIRVF----------WNML--------- 206
VF+E+ RD V WS+++AGYVQ + DA+ +F W L
Sbjct: 160 VFEEL----RDENHVLWSLMLAGYVQRDMIGDAMEIFEKMPVRDVVAWTTLISGYAKRED 215
Query: 207 --------------SDNVVPNEFTLTSVLSACAHSGALDQGKLVH 237
S V+PNEFTL VL CA L GK+VH
Sbjct: 216 GCERALDLFGCMRRSSEVLPNEFTLDCVLRVCARLRILYVGKVVH 260
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 100/207 (48%), Gaps = 15/207 (7%)
Query: 50 LISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSE-ALKCFVKMRSTGTGV 108
+++ + IG A ++F++ V+D++AWT LI+GY K + E AL F MR + +
Sbjct: 175 MLAGYVQRDMIGDAMEIFEKMPVRDVVAWTTLISGYAKREDGCERALDLFGCMRRSSEVL 234
Query: 109 -DALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACK 167
+ T+ VLR A GK VHG ++ G D V SAL + Y DDA +
Sbjct: 235 PNEFTLDCVLRVCARLRILYVGKVVHGLCIKDG-FDFDNSVSSALAEFYCVSDAVDDAKR 293
Query: 168 VFDEMPYSYRDVVCWSV---LVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSAC 224
V++ M C +V L+ G V + ++A +F+ + ++ N ++
Sbjct: 294 VYESMV----GEACSNVADSLIGGLVSMGRVKEAGMIFYGLRDKTLISNNL----MIKGY 345
Query: 225 AHSGALDQGKLVHQYIECKKV-SLNSV 250
A SG + K + + + K + SLN++
Sbjct: 346 AMSGQFKKSKKLFEKMSLKHLTSLNTM 372
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 114/250 (45%), Gaps = 10/250 (4%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPV-VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
MR+ VE + TF +L + + + +++A + K + + + G AL+ ++ G
Sbjct: 424 MRRFLVEYSRSTFSVLFRACAYLCSFQQGQLLHAHLAKTPYQENVYVGTALVDFYSKCGH 483
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ A + F ++ AWTALINGY + SEA+ F M G +A T V+VL A
Sbjct: 484 LADAQRSFTSIFSPNVAAWTALINGYAYHGCGSEAISRFRSMLDQGVVPNAATFVAVLSA 543
Query: 120 AAMAGDDNFG-KWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRD 178
+ AG + G K+ H + R+ ++ ++D+ + G +A + +MP D
Sbjct: 544 CSHAGLVDEGLKFFHSMQINY-RITPTIEHYTCVVDLLGRSGRVKEAEEFIIQMPIK-AD 601
Query: 179 VVCWSVLVAGYVQCNKFQ----DAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGK 234
V W L+ N + A+++F L N V TL+++ + G + +
Sbjct: 602 GVIWGALLNASCFWNNVELGERAAVKLF--SLDPNSVSALVTLSNMYARRGRWGKKTKIR 659
Query: 235 LVHQYIECKK 244
Q +E +K
Sbjct: 660 KRLQSLELRK 669
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
Query: 158 KCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTL 217
K G +A +FDEMP R V W+ +++GY Q K+ +A+ + M S V NE +
Sbjct: 49 KTGKLVEARHMFDEMPL--RTVSSWNTMISGYSQWGKYTEALTLVSFMHSSCVKFNEVSF 106
Query: 218 TSVLSACAHSGALDQGKLVHQYI 240
++ LSAC G+L GK +H +
Sbjct: 107 SACLSACTRGGSLFLGKQIHSLL 129
>Medtr2g019350.1 | PPR containing plant-like protein | HC |
chr2:6301271-6304315 | 20130731
Length = 601
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 111/203 (54%), Gaps = 3/203 (1%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
++ K+GF + ALI +A +G I A +VFD KD++ W LI Y ++ L
Sbjct: 233 LHGYCIKIGFCCNLNVVTALIDMYAKTGCIYLARKVFDGVVEKDVVLWNCLIKNYARSCL 292
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
EA+ MR G ++ T+V +L + +G ++V ++ +++LD + +
Sbjct: 293 VEEAVALLQSMRQEGVKPNSSTLVGLLSVYSASGSMQGVRYVTSL-IEEEKLELDVILGT 351
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV 210
AL+D+Y KCG D+A ++F+ M +DV W+ +++G+ + +AI +F M ++
Sbjct: 352 ALVDVYAKCGFLDEAMEIFERM--ENKDVKSWTAVISGHGIHGQAINAISLFNRMENEGF 409
Query: 211 VPNEFTLTSVLSACAHSGALDQG 233
PNE T ++L+AC+H G + +G
Sbjct: 410 RPNEITFLAILTACSHGGLVTEG 432
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 111/213 (52%), Gaps = 5/213 (2%)
Query: 48 NALISAFANSGFIGSACQVFDESSVK-DIIAWTALINGYVKNDLPSEALKCFVKMRSTGT 106
N ++ + G I A +VFDE + D+++W L+ G V S F+K +G
Sbjct: 148 NTILQFYCVCGRIDDARKVFDECPERNDLVSWNILMGGCVLVSDYSFVFDLFLKRGCSGI 207
Query: 107 GVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDAC 166
T +S+L AA G GK +HG+ ++ G + V +AL+DMY K G A
Sbjct: 208 RASVATTLSLLSAAGDIGSFVLGKSLHGYCIKIGFC-CNLNVVTALIDMYAKTGCIYLAR 266
Query: 167 KVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAH 226
KVFD + +DVV W+ L+ Y + ++A+ + +M + V PN TL +LS +
Sbjct: 267 KVFDGVVE--KDVVLWNCLIKNYARSCLVEEAVALLQSMRQEGVKPNSSTLVGLLSVYSA 324
Query: 227 SGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
SG++ + V IE +K+ L+ + LGTALVD+
Sbjct: 325 SGSMQGVRYVTSLIEEEKLELDVI-LGTALVDV 356
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 117/236 (49%), Gaps = 20/236 (8%)
Query: 29 FMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKN 88
+MI + + F L + ++ + A +F ++ + ++ GY +
Sbjct: 35 YMIKTSLTNVPFTLSKLLAASIFD-------MNYASTIFTCIQNPNLFMYNTMLRGYSVS 87
Query: 89 DLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAG-RVQLDGY 147
+ ++AL F K+R++G G+D + ++V++A + + FG+ VHG V++G R +D
Sbjct: 88 NSSNKALPIFNKLRNSGNGLDPFSFIAVMKACGRSFEVGFGRGVHGIVVKSGNRFFVD-- 145
Query: 148 VWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLS 207
+ + ++ Y CG DDA KVFDE P D+V W++L+ G V + + +F
Sbjct: 146 LNNTILQFYCVCGRIDDARKVFDECP-ERNDLVSWNILMGGCVLVSDYSFVFDLFLKRGC 204
Query: 208 DNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKV----SLNSVELGTALVDM 259
+ + T S+LSA G+ GK +H Y C K+ +LN V TAL+DM
Sbjct: 205 SGIRASVATTLSLLSAAGDIGSFVLGKSLHGY--CIKIGFCCNLNVV---TALIDM 255
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 93/199 (46%), Gaps = 24/199 (12%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKP-VVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
MRQ+GV+P+ T LL ++S ++ + + I + +LD G AL+ +A GF
Sbjct: 303 MRQEGVKPNSSTLVGLLSVYSASGSMQGVRYVTSLIEEEKLELDVILGTALVDVYAKCGF 362
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ A ++F+ KD+ +WTA+I+G+ + A+ F +M + G + +T +++L A
Sbjct: 363 LDEAMEIFERMENKDVKSWTAVISGHGIHGQAINAISLFNRMENEGFRPNEITFLAILTA 422
Query: 120 AAMAGDDNFGKWVHGFYVQAG------RVQLDGYV-----WSALMDMYFKCGHCDDACKV 168
+ HG V G VQ G+ + L+D+ + G +A ++
Sbjct: 423 CS-----------HGGLVTEGVEFFKRMVQEHGFSPWVEHYGCLIDLLGRAGMLHEAFEL 471
Query: 169 FDEMPYSYRDVVCWSVLVA 187
+P D W L++
Sbjct: 472 IKSLPIK-GDATSWRTLLS 489
>Medtr5g018370.1 | PPR containing plant-like protein | HC |
chr5:6845861-6848150 | 20130731
Length = 714
Score = 107 bits (268), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 120/235 (51%), Gaps = 4/235 (1%)
Query: 7 EPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQ 65
+PD +T+ ++ P ++ Q+ K GF F G+ L+S + + +A +
Sbjct: 314 KPDDYTYAGIISATGAFPCFSYGKPLHGQVIKAGFVRSVFVGSTLVSMYFKNQETEAALR 373
Query: 66 VFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGD 125
VF KD I WT +I GY K A++CF +M +D + VL A
Sbjct: 374 VFCSIPGKDAILWTEMITGYSKMADGMGAIRCFSEMHHEVHEIDDYVLSGVLSVCAYLAI 433
Query: 126 DNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVL 185
G+ +H + + G ++ V +L+DMY K G+ + A VF ++ S+ D+ CW+ +
Sbjct: 434 LRQGEIIHCYAYKLG-YDVEMSVSGSLIDMYAKNGNLEAAYLVFSQV--SHPDLKCWNSM 490
Query: 186 VAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYI 240
+ G+ DA+++F ++ +VP++ T S+LSAC+HS ++QGKL+ Y+
Sbjct: 491 LGGFSHHGMVDDALKLFEEIIKQGLVPDQVTFLSLLSACSHSRLVEQGKLLWNYM 545
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 124/261 (47%), Gaps = 6/261 (2%)
Query: 1 MRQKGVEPDQHTFPLLLKMFS-KPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M G+ P T LL+ S + +++A+ K GF D +L++ +++
Sbjct: 105 MENMGLRPSNMTITSLLQAASLHGDLLIGLLLHAKSLKFGFLNDICVQTSLLNMYSSCMD 164
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ SA VF + + +D +AW +LI GY+KND + + F++M G T +L A
Sbjct: 165 LSSAESVFCDMNERDNVAWNSLILGYLKNDKIEKGVYLFIEMMWVGFTPTVYTFCMILSA 224
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
+ D G+ +H V G V D ++ +AL+DMY G A +F M D+
Sbjct: 225 CSRLKDYFSGRLIHA-RVIVGNVSPDLHLQNALVDMYCNAGDTQTAYMIFSRM--EKWDL 281
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVV-PNEFTLTSVLSACAHSGALDQGKLVHQ 238
V W+ +++GY + + A+ +F + + P+++T ++SA GK +H
Sbjct: 282 VSWNSMISGYFENEDGEKAMNLFVQLKALCFPKPDDYTYAGIISATGAFPCFSYGKPLHG 341
Query: 239 YIECKKVSLNSVELGTALVDM 259
+ K + SV +G+ LV M
Sbjct: 342 QV-IKAGFVRSVFVGSTLVSM 361
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 88/180 (48%), Gaps = 1/180 (0%)
Query: 30 MIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKND 89
+I+ +KLG+D++ +LI +A +G + +A VF + S D+ W +++ G+ +
Sbjct: 439 IIHCYAYKLGYDVEMSVSGSLIDMYAKNGNLEAAYLVFSQVSHPDLKCWNSMLGGFSHHG 498
Query: 90 LPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVW 149
+ +ALK F ++ G D +T +S+L A + + GK + + G V + +
Sbjct: 499 MVDDALKLFEEIIKQGLVPDQVTFLSLLSACSHSRLVEQGKLLWNYMSSIGLVPGPKH-Y 557
Query: 150 SALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDN 209
S ++ + + ++A ++ ++ PY +V W L++ V + +R +L N
Sbjct: 558 SCMVTLLSRAALLEEAEEIINKSPYVEDNVELWRTLLSACVINKNLKVGVRAAEEVLRFN 617
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 65/116 (56%), Gaps = 5/116 (4%)
Query: 146 GYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQ--DAIRVFW 203
++++ ++ MY +CG +DA +VFD+MP R V ++ L+A Y + ++ A ++
Sbjct: 46 AFLYNNIISMYSRCGSLEDAHQVFDKMP--QRTHVSYNALLAAYSRVSEQHCVYAFNLYT 103
Query: 204 NMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
M + + P+ T+TS+L A + G L G L+H K LN + + T+L++M
Sbjct: 104 QMENMGLRPSNMTITSLLQAASLHGDLLIGLLLHAK-SLKFGFLNDICVQTSLLNM 158
>Medtr6g022140.2 | pentatricopeptide (PPR) repeat protein | HC |
chr6:7700828-7697127 | 20130731
Length = 774
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 114/234 (48%), Gaps = 4/234 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKM-FSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
MR+ GV+ + TF ++K E I+ Q+ K + D F ++L+ ++ G
Sbjct: 246 MRRMGVKCSKFTFSSVVKACVGNGDFEVGRQIHGQVLKNSLEGDEFVASSLVDLYSFFGE 305
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
I + F+ + D+++WT+ I G VKN L F + + G +D V SV+ A
Sbjct: 306 IDDGLRCFEMTPKLDVVSWTSAIAGCVKNGKFENGLSLFYRFLADGRKLDEFIVSSVMGA 365
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
A G+ + G+ ++ G V + + MY K G D A F E DV
Sbjct: 366 CADMAAARTGEQIQGYALKFGVADFT-VVKNTQICMYAKSGDIDSARNTFQETEKP--DV 422
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
V WSV++ Y Q ++++R+F M +VPN+ TL VL+AC+H G +D+G
Sbjct: 423 VSWSVMICSYAQHGFAKESLRLFELMTVSGIVPNQITLLGVLTACSHGGLVDEG 476
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 112/216 (51%), Gaps = 9/216 (4%)
Query: 30 MIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFD--ESSVKDIIAWTALINGYVK 87
+I+ KLG D + AL+ +A SG + A +VF+ + K+ + A+I G+++
Sbjct: 169 LIHGFGIKLGLDFNVVVATALLDMYAKSGCLRDAVRVFEGFDLKSKNDFMYNAMIAGFLR 228
Query: 88 NDL----PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQ 143
L EA++ F +MR G T SV++A GD G+ +HG V ++
Sbjct: 229 GGLCCENAREAVRVFNEMRRMGVKCSKFTFSSVVKACVGNGDFEVGRQIHG-QVLKNSLE 287
Query: 144 LDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFW 203
D +V S+L+D+Y G DD + F+ P DVV W+ +AG V+ KF++ + +F+
Sbjct: 288 GDEFVASSLVDLYSFFGEIDDGLRCFEMTP--KLDVVSWTSAIAGCVKNGKFENGLSLFY 345
Query: 204 NMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQY 239
L+D +EF ++SV+ ACA A G+ + Y
Sbjct: 346 RFLADGRKLDEFIVSSVMGACADMAAARTGEQIQGY 381
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 131/244 (53%), Gaps = 22/244 (9%)
Query: 31 IYAQIFKLGFDLDRFAG--NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKN 88
I+A I GF L++ + N+LI+ ++ I ++ +FD SS+KD ++W ++I+ Y K
Sbjct: 63 IHASILINGF-LNKTSSFLNSLINMYSKCNQIQTSRFLFDNSSIKDNVSWNSIISAYAKL 121
Query: 89 DLPS---EALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDN--FGKWVHGFYVQAGRVQ 143
+ E + +M G T+ SVL A DDN +G+ +HGF ++ G +
Sbjct: 122 GTKTSYGEVFQLVYRMHRFGYAFSDYTLSSVLNACCFCVDDNCFYGRLIHGFGIKLG-LD 180
Query: 144 LDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQ----CNKFQDAI 199
+ V +AL+DMY K G DA +VF+ ++ ++ ++AG+++ C ++A+
Sbjct: 181 FNVVVATALLDMYAKSGCLRDAVRVFEGFDLKSKNDFMYNAMIAGFLRGGLCCENAREAV 240
Query: 200 RVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVE----LGTA 255
RVF M V ++FT +SV+ AC +G + G+ +H +V NS+E + ++
Sbjct: 241 RVFNEMRRMGVKCSKFTFSSVVKACVGNGDFEVGRQIHG-----QVLKNSLEGDEFVASS 295
Query: 256 LVDM 259
LVD+
Sbjct: 296 LVDL 299
>Medtr1g041310.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:15372357-15367000 | 20130731
Length = 686
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/232 (32%), Positives = 117/232 (50%), Gaps = 4/232 (1%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALIN--GYVKN 88
++ KL F+ D F G++LI ++ G I A +VFDE + KDI A+T++I G+
Sbjct: 54 VHVDSIKLNFNSDCFVGSSLIRLYSQYGKIKDAHKVFDEITNKDIFAYTSMITAYGHSGG 113
Query: 89 DLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYV 148
A M+ G + +T+VS++ AAA G+ VHG+ V+ D
Sbjct: 114 SCVYGAFNTAFIMQQQGMLPNRVTLVSLMHAAAKLRALREGQAVHGYAVRREIGLGDDVF 173
Query: 149 WSALMDMYFKCGHCDDACKVFDEM-PYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLS 207
+ L+DMY KCG A VF +M V W+ L+AGY++ + +A +F M+
Sbjct: 174 ETTLLDMYHKCGGVGLAASVFAKMDARKMTKVGSWNALIAGYLRNGQALEAFELFRRMMC 233
Query: 208 DNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
NV+P+ TL + + C L +G +H Y+ V L+ V TALVD+
Sbjct: 234 RNVLPDLLTLANAIFCCVELNYLRRGMSIHGYMITMGVELDLVA-STALVDL 284
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 107/189 (56%), Gaps = 7/189 (3%)
Query: 47 GNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGT 106
N +I A+A G++ A +VF+ +D+++WT++I GYV + +A+ F ++
Sbjct: 378 ANQIIHAYAKFGYVVDAREVFNRMRTRDLVSWTSMIKGYVYHGHIDKAIILFRLLQREHL 437
Query: 107 GVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQ--AGRVQLDGYVWSALMDMYFKCGHCDD 164
+D++T++ +L+A + G +F K VH F + G+ D V ++L+ Y KCG
Sbjct: 438 SIDSVTLIGLLQALSQLGCLSFIKEVHCFSYRFFHGK---DLSVNNSLITTYAKCGKLCT 494
Query: 165 ACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSAC 224
A +F +M + R + W+ ++ Y + + + +F +M + V P+E T TS+L+AC
Sbjct: 495 ARYIFQQM--TERCLTSWNAMIGAYAMHGNYTEVLELFDHMKAGKVTPDEVTFTSILTAC 552
Query: 225 AHSGALDQG 233
+HSG +++G
Sbjct: 553 SHSGLVEEG 561
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 111/228 (48%), Gaps = 8/228 (3%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
I+ + +G +LD A AL+ + I A ++F+ KD + + ++ GY++N L
Sbjct: 262 IHGYMITMGVELDLVASTALVDLYCKID-ITKARKLFERLGNKDAVVYNVMMTGYLENGL 320
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
P EA+ F +M T + ++++ A + D + +HG+ ++ + + +
Sbjct: 321 PVEAVNVFREMVKTNASTNVALFLNLISALSKLRDIRLVRSIHGYVLRHMHIT-HVEIAN 379
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV 210
++ Y K G+ DA +VF+ M RD+V W+ ++ GYV AI +F + +++
Sbjct: 380 QIIHAYAKFGYVVDAREVFNRM--RTRDLVSWTSMIKGYVYHGHIDKAIILFRLLQREHL 437
Query: 211 VPNEFTLTSVLSACAHSGALDQGKLVH----QYIECKKVSLNSVELGT 254
+ TL +L A + G L K VH ++ K +S+N+ + T
Sbjct: 438 SIDSVTLIGLLQALSQLGCLSFIKEVHCFSYRFFHGKDLSVNNSLITT 485
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 69/145 (47%)
Query: 43 DRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMR 102
D N+LI+ +A G + +A +F + + + + +W A+I Y + +E L+ F M+
Sbjct: 475 DLSVNNSLITTYAKCGKLCTARYIFQQMTERCLTSWNAMIGAYAMHGNYTEVLELFDHMK 534
Query: 103 STGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHC 162
+ D +T S+L A + +G G + G ++ + + +S ++D+ + G
Sbjct: 535 AGKVTPDEVTFTSILTACSHSGLVEEGLQIFGIMMKEYAIVPNEVHYSCIVDLLSRAGRL 594
Query: 163 DDACKVFDEMPYSYRDVVCWSVLVA 187
+A + MP ++ ++L A
Sbjct: 595 REAYNLVKSMPSTHSSAAMSALLSA 619
>Medtr6g059820.1 | PPR containing plant-like protein | HC |
chr6:20520961-20518530 | 20130731
Length = 528
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPFMIYAQIFKLGF-------------------- 40
M + P+ +P +LK + + D +++AQI K GF
Sbjct: 94 MLNSNIRPNNFIYPHVLKSVKERFLVD--LVHAQIVKCGFLNYPVVETSLVDSYSKVLGG 151
Query: 41 ------------DLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKN 88
+ + L+S + G + VFDE +D+ AW A+I+G +N
Sbjct: 152 LRDAHKVFDEMSERNIVVFTVLVSGYLRVGDVEKGLMVFDEMVDRDVPAWNAVISGCTQN 211
Query: 89 DLPSEALKCFVKMR----------STGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQ 138
SE ++ F +M G + +TVV VL A G GKW+HG+ +
Sbjct: 212 GFFSEGIRLFREMVFAAGLGEGGFCKGNKPNQVTVVCVLSACGHGGMLQLGKWIHGYVYR 271
Query: 139 AGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDA 198
G V +D +V +AL+DMY KCG + A KVF EM + + W+ ++ Y K +DA
Sbjct: 272 HGFV-VDSFVSNALVDMYGKCGSLELARKVF-EMD-QRKGLTSWNSMINCYALHGKCEDA 328
Query: 199 IRVFWNMLS--DNVVPNEFTLTSVLSACAHSGALDQG 233
I F M+ V P+E T +L+AC H G ++QG
Sbjct: 329 ITFFEKMVECGGGVRPDEVTFIGLLNACTHGGLVEQG 365
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 60/122 (49%), Gaps = 13/122 (10%)
Query: 148 VWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNML- 206
V++ L+ Y + G + VFDEM RDV W+ +++G Q F + IR+F M+
Sbjct: 169 VFTVLVSGYLRVGDVEKGLMVFDEM--VDRDVPAWNAVISGCTQNGFFSEGIRLFREMVF 226
Query: 207 ---------SDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALV 257
PN+ T+ VLSAC H G L GK +H Y+ ++S + ALV
Sbjct: 227 AAGLGEGGFCKGNKPNQVTVVCVLSACGHGGMLQLGKWIHGYVYRHGFVVDSF-VSNALV 285
Query: 258 DM 259
DM
Sbjct: 286 DM 287
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 85/188 (45%), Gaps = 4/188 (2%)
Query: 4 KGVEPDQHTFPLLLKMFSKP-VVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGS 62
KG +P+Q T +L +++ I+ +++ GF +D F NAL+ + G +
Sbjct: 237 KGNKPNQVTVVCVLSACGHGGMLQLGKWIHGYVYRHGFVVDSFVSNALVDMYGKCGSLEL 296
Query: 63 ACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGV--DALTVVSVLRAA 120
A +VF+ K + +W ++IN Y + +A+ F KM G GV D +T + +L A
Sbjct: 297 ARKVFEMDQRKGLTSWNSMINCYALHGKCEDAITFFEKMVECGGGVRPDEVTFIGLLNAC 356
Query: 121 AMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVV 180
G G ++ ++ + L+D+ + G D+A V M +VV
Sbjct: 357 THGGLVEQGCGYFEMMIKEYGIEPQIAHYGCLIDLLGRAGQFDEAMDVVKGMSMEPDEVV 416
Query: 181 CWSVLVAG 188
W L+ G
Sbjct: 417 -WGSLLNG 423
>Medtr8g009490.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:2188077-2185482 | 20130731
Length = 316
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/245 (30%), Positives = 122/245 (49%), Gaps = 3/245 (1%)
Query: 15 LLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKD 74
LL K FS + +I+A+ +LG D F L+S +A+ + A +F ++ K
Sbjct: 14 LLNKCFSSKNINSLKIIHARTIRLGISHDDFIRTKLVSCYASCSKLHQANILFSFTNRKP 73
Query: 75 IIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHG 134
+LI Y+ +L E L F +MR + D T+ VL++ A GK VHG
Sbjct: 74 TFLNNSLIRAYLSLNLFKETLSLFREMRLSYKPFDCHTLPLVLKSCAGLSALRLGKQVHG 133
Query: 135 FYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNK 194
+ G LD +AL++MY KCG + A KVFD M R+ V WS ++AGY +
Sbjct: 134 AVLVNG-FALDLKNSNALINMYAKCGELEFARKVFDGM--CERNEVTWSTMIAGYGMHGR 190
Query: 195 FQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGT 254
F++ +F M+ + + T VL+AC+H G +++G+ + + ++ + V T
Sbjct: 191 FEEVFEMFNRMVEVGERMDNVSFTVVLTACSHGGFVEKGREIFEMMKVRFGVKPDVRHYT 250
Query: 255 ALVDM 259
+VDM
Sbjct: 251 CMVDM 255
>Medtr6g022140.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:7700828-7696262 | 20130731
Length = 857
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 114/234 (48%), Gaps = 4/234 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKM-FSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
MR+ GV+ + TF ++K E I+ Q+ K + D F ++L+ ++ G
Sbjct: 246 MRRMGVKCSKFTFSSVVKACVGNGDFEVGRQIHGQVLKNSLEGDEFVASSLVDLYSFFGE 305
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
I + F+ + D+++WT+ I G VKN L F + + G +D V SV+ A
Sbjct: 306 IDDGLRCFEMTPKLDVVSWTSAIAGCVKNGKFENGLSLFYRFLADGRKLDEFIVSSVMGA 365
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
A G+ + G+ ++ G V + + MY K G D A F E DV
Sbjct: 366 CADMAAARTGEQIQGYALKFGVADFT-VVKNTQICMYAKSGDIDSARNTFQETEKP--DV 422
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
V WSV++ Y Q ++++R+F M +VPN+ TL VL+AC+H G +D+G
Sbjct: 423 VSWSVMICSYAQHGFAKESLRLFELMTVSGIVPNQITLLGVLTACSHGGLVDEG 476
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 112/216 (51%), Gaps = 9/216 (4%)
Query: 30 MIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFD--ESSVKDIIAWTALINGYVK 87
+I+ KLG D + AL+ +A SG + A +VF+ + K+ + A+I G+++
Sbjct: 169 LIHGFGIKLGLDFNVVVATALLDMYAKSGCLRDAVRVFEGFDLKSKNDFMYNAMIAGFLR 228
Query: 88 NDL----PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQ 143
L EA++ F +MR G T SV++A GD G+ +HG V ++
Sbjct: 229 GGLCCENAREAVRVFNEMRRMGVKCSKFTFSSVVKACVGNGDFEVGRQIHG-QVLKNSLE 287
Query: 144 LDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFW 203
D +V S+L+D+Y G DD + F+ P DVV W+ +AG V+ KF++ + +F+
Sbjct: 288 GDEFVASSLVDLYSFFGEIDDGLRCFEMTP--KLDVVSWTSAIAGCVKNGKFENGLSLFY 345
Query: 204 NMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQY 239
L+D +EF ++SV+ ACA A G+ + Y
Sbjct: 346 RFLADGRKLDEFIVSSVMGACADMAAARTGEQIQGY 381
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 131/244 (53%), Gaps = 22/244 (9%)
Query: 31 IYAQIFKLGFDLDRFAG--NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKN 88
I+A I GF L++ + N+LI+ ++ I ++ +FD SS+KD ++W ++I+ Y K
Sbjct: 63 IHASILINGF-LNKTSSFLNSLINMYSKCNQIQTSRFLFDNSSIKDNVSWNSIISAYAKL 121
Query: 89 DLPS---EALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDN--FGKWVHGFYVQAGRVQ 143
+ E + +M G T+ SVL A DDN +G+ +HGF ++ G +
Sbjct: 122 GTKTSYGEVFQLVYRMHRFGYAFSDYTLSSVLNACCFCVDDNCFYGRLIHGFGIKLG-LD 180
Query: 144 LDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQ----CNKFQDAI 199
+ V +AL+DMY K G DA +VF+ ++ ++ ++AG+++ C ++A+
Sbjct: 181 FNVVVATALLDMYAKSGCLRDAVRVFEGFDLKSKNDFMYNAMIAGFLRGGLCCENAREAV 240
Query: 200 RVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVE----LGTA 255
RVF M V ++FT +SV+ AC +G + G+ +H +V NS+E + ++
Sbjct: 241 RVFNEMRRMGVKCSKFTFSSVVKACVGNGDFEVGRQIH-----GQVLKNSLEGDEFVASS 295
Query: 256 LVDM 259
LVD+
Sbjct: 296 LVDL 299
>Medtr6g066360.1 | PPR containing plant-like protein | HC |
chr6:24701161-24699312 | 20130731
Length = 563
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 123/245 (50%), Gaps = 17/245 (6%)
Query: 5 GVEPDQHTFPLLLKMFSKPVVEDPFM-----IYAQIFKLGF-----DLDRFAGNALISAF 54
G +P TF +L +S + F+ ++ + KLG LD N+L+ +
Sbjct: 106 GFKPSSSTFVSILSGYSSNLNSFEFLWQGMSMHCFVIKLGLVCFEVSLD----NSLMGMY 161
Query: 55 ANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVV 114
A G + A +VFD K I++WT ++ GYVK EA+K F +M+ G+D + V
Sbjct: 162 AQFGQMDEARKVFDFMDEKTIVSWTTIMGGYVKVGSSVEAVKLFNEMQHQNIGLDFIVFV 221
Query: 115 SVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPY 174
+++ + VH ++ G + D + + L+ MY +CG+ A +FD +
Sbjct: 222 NLVSGCIQLREQLLASSVHSLVLKCGCHEEDS-IKNLLLTMYARCGNLTSARIIFDLIV- 279
Query: 175 SYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGK 234
+ V+ W+ ++AGY + ++A+ +F M+ + PN TL +VLSACA G+L G+
Sbjct: 280 -RKSVLSWTSMIAGYAHSRRPKEALDLFRRMVMTEIKPNRATLATVLSACADLGSLCIGE 338
Query: 235 LVHQY 239
+ QY
Sbjct: 339 EIEQY 343
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 116/230 (50%), Gaps = 9/230 (3%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPV-VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M V + T+PLL K + + + M++ +F+LGF D F +L+ ++
Sbjct: 1 MHHSSVHGNTFTYPLLFKSCANLLSIPHGTMLHGHVFRLGFQADTFVQTSLVDMYSKCSV 60
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
I SA +VFDE + +++W +LI+ Y + +AL +M G + T VS+L
Sbjct: 61 IESARKVFDEMPERSVVSWNSLISAYCHESMMEKALSLIKEMLVLGFKPSSSTFVSILSG 120
Query: 120 AAMAGDDNF-----GKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPY 174
+ + ++F G +H F ++ G V + + ++LM MY + G D+A KVFD M
Sbjct: 121 YS-SNLNSFEFLWQGMSMHCFVIKLGLVCFEVSLDNSLMGMYAQFGQMDEARKVFDFM-- 177
Query: 175 SYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSAC 224
+ +V W+ ++ GYV+ +A+++F M N+ + +++S C
Sbjct: 178 DEKTIVSWTTIMGGYVKVGSSVEAVKLFNEMQHQNIGLDFIVFVNLVSGC 227
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 107/204 (52%), Gaps = 4/204 (1%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
+++ + K G + N L++ +A G + SA +FD K +++WT++I GY +
Sbjct: 239 VHSLVLKCGCHEEDSIKNLLLTMYARCGNLTSARIIFDLIVRKSVLSWTSMIAGYAHSRR 298
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
P EAL F +M T + T+ +VL A A G G+ + + + G + D V +
Sbjct: 299 PKEALDLFRRMVMTEIKPNRATLATVLSACADLGSLCIGEEIEQYAFENG-FETDLQVQT 357
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLS-DN 209
+L+ MY KCG+ + A +VF+ + +D+ WS ++ Y +AI +F M + +
Sbjct: 358 SLVHMYSKCGNINKAREVFERVE--NKDLTLWSSMINSYGIHGMGNEAISLFEKMTTAER 415
Query: 210 VVPNEFTLTSVLSACAHSGALDQG 233
+ P+ TS+L AC+HSG ++ G
Sbjct: 416 IKPDAIVYTSLLFACSHSGLIEDG 439
>Medtr2g436470.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:14170762-14173219 | 20130731
Length = 503
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 99/193 (51%), Gaps = 3/193 (1%)
Query: 42 LDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKM 101
++ F N +I + SG A +VFD+ V+D++ W +I GYVKN +AL F M
Sbjct: 66 MNLFNMNLVIESLVKSGECDIAKKVFDKMPVRDVVTWNTVIGGYVKNLRFLDALSIFRVM 125
Query: 102 RSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGH 161
D T SV+ A G KWVHG V+ +V+L+ + +AL+DMY KCG
Sbjct: 126 LKAKVEPDGFTFASVVTGCARLGSFCNAKWVHGLMVEK-KVELNYILTAALVDMYAKCGR 184
Query: 162 CDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVL 221
D + +VF+ + + V W+ ++ G DA VF M +NV+P+ T +L
Sbjct: 185 VDVSKEVFECVVRDHVSV--WNAMINGLAIHGHALDATVVFSRMEVENVLPDSVTFVGIL 242
Query: 222 SACAHSGALDQGK 234
C+H G ++ G+
Sbjct: 243 KGCSHCGLVEVGR 255
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 74/133 (55%), Gaps = 12/133 (9%)
Query: 136 YVQAGRVQLDGYVWSALMDMY---------FKCGHCDDACKVFDEMPYSYRDVVCWSVLV 186
Y + + +V+S +M+++ K G CD A KVFD+MP RDVV W+ ++
Sbjct: 49 YAHCQQPNIAHHVFSRVMNLFNMNLVIESLVKSGECDIAKKVFDKMPV--RDVVTWNTVI 106
Query: 187 AGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVS 246
GYV+ +F DA+ +F ML V P+ FT SV++ CA G+ K VH + KKV
Sbjct: 107 GGYVKNLRFLDALSIFRVMLKAKVEPDGFTFASVVTGCARLGSFCNAKWVHGLMVEKKVE 166
Query: 247 LNSVELGTALVDM 259
LN + L ALVDM
Sbjct: 167 LNYI-LTAALVDM 178
>Medtr4g119420.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:49468862-49466962 | 20130731
Length = 589
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 122/230 (53%), Gaps = 7/230 (3%)
Query: 32 YAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLP 91
+A + K G D F N LI+++ I A ++FDE S ++++W+ L+ GYV+ P
Sbjct: 46 HANVVKSGLSNDTFTTNNLINSYLKLLKIDHAHKLFDEMSHPNVVSWSLLMAGYVRQGQP 105
Query: 92 SEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSA 151
+ AL F +M+ T + T +++ A ++ + G+ +H V+ + D V S+
Sbjct: 106 NIALCLFHQMQGTLVMPNEFTFSTLINACSILANLETGRRIHAL-VEVFGYRSDLVVCSS 164
Query: 152 LMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVF--WNMLSDN 209
L+DMY KC D+A +FD M R+VV W+ ++ Y Q + A+++F +N + N
Sbjct: 165 LIDMYGKCNRVDEAQMIFDFM--WVRNVVSWTSMITTYSQNGQGHLALQLFREFNHIRMN 222
Query: 210 VVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
PN F L S ++ACA G L GK+ H + + V + +ALVDM
Sbjct: 223 -KPNHFMLCSAVTACASLGRLGSGKITHGVVIRLGHDASDV-VASALVDM 270
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 101/223 (45%), Gaps = 5/223 (2%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPV-VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M+ V P++ TF L+ S +E I+A + G+ D ++LI +
Sbjct: 115 MQGTLVMPNEFTFSTLINACSILANLETGRRIHALVEVFGYRSDLVVCSSLIDMYGKCNR 174
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGV-DALTVVSVLR 118
+ A +FD V+++++WT++I Y +N AL+ F + + + S +
Sbjct: 175 VDEAQMIFDFMWVRNVVSWTSMITTYSQNGQGHLALQLFREFNHIRMNKPNHFMLCSAVT 234
Query: 119 AAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRD 178
A A G GK HG ++ G D V SAL+DMY KCG + KVF +
Sbjct: 235 ACASLGRLGSGKITHGVVIRLGHDASD-VVASALVDMYAKCGCVTYSDKVFRRIVNP--S 291
Query: 179 VVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVL 221
VV ++ ++ G + ++R+F M+ + PN T VL
Sbjct: 292 VVPYTSMIVGAAKYGLGTLSLRLFQEMVDRRIKPNSITFVGVL 334
>Medtr4g073930.1 | PPR containing plant-like protein | HC |
chr4:28099513-28096632 | 20130731
Length = 597
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 101/188 (53%), Gaps = 2/188 (1%)
Query: 46 AGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTG 105
A L+S +A G + SA ++F + K+ +WTALI GY +N + +AL F KM
Sbjct: 246 AWTTLVSGYALCGDMDSAAEMFSQMPKKNTYSWTALIGGYARNGMAHKALGVFRKMIMHR 305
Query: 106 TGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDA 165
D T S L A A GK +H F ++ ++ + V SA++DMY KCG + A
Sbjct: 306 VRPDEFTFSSCLFACATIASLKHGKQIHAFLLR-NNIRPNPVVVSAVVDMYAKCGSMETA 364
Query: 166 CKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACA 225
++F+ + +DVV W+ +++ ++A+ + +ML V PN TL ++L+AC+
Sbjct: 365 RRIFNFTEH-MQDVVLWNTMISALAHYGYGKEAVLMLNDMLKSGVKPNRNTLVAILNACS 423
Query: 226 HSGALDQG 233
HSG + G
Sbjct: 424 HSGLVCDG 431
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 109/245 (44%), Gaps = 33/245 (13%)
Query: 45 FAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRST 104
++ N +IS + G + A VF + KD ++W A++ GY SEAL+ + MR
Sbjct: 113 YSWNNMISGYVKLGMMKQARGVFYKMPEKDCVSWNAMVVGYAHCGRFSEALRFYGWMRRV 172
Query: 105 GTGVDALTVVSVLRAAAMAGDDNFGKWVHG-------------------FYVQAGRVQ-- 143
G + T SVL + + +HG Y + G+++
Sbjct: 173 CVGYNEFTFASVLIVCVKLKEFELCRQIHGQVVVVGFLSNVVVSSSIVDAYAKCGKMEDA 232
Query: 144 ---------LDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNK 194
D W+ L+ Y CG D A ++F +MP ++ W+ L+ GY +
Sbjct: 233 MRLFDDMTVRDIPAWTTLVSGYALCGDMDSAAEMFSQMPK--KNTYSWTALIGGYARNGM 290
Query: 195 FQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGT 254
A+ VF M+ V P+EFT +S L ACA +L GK +H ++ + N V + +
Sbjct: 291 AHKALGVFRKMIMHRVRPDEFTFSSCLFACATIASLKHGKQIHAFLLRNNIRPNPVVV-S 349
Query: 255 ALVDM 259
A+VDM
Sbjct: 350 AVVDM 354
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 70/175 (40%), Gaps = 29/175 (16%)
Query: 92 SEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSA 151
S+A+ + G + + + ++LR + GK VH G + + +
Sbjct: 27 SDAVSSLDVLHPRGIRLSSHILATLLRRCSDTKSYKEGKLVHLHLKLTGFKRPTTLIANH 86
Query: 152 LMDMYFKCGHCDDACKVFDEMP----YSY-------------------------RDVVCW 182
L+ MYF CG A KVFD+M YS+ +D V W
Sbjct: 87 LIHMYFCCGDYVRARKVFDKMDVRNLYSWNNMISGYVKLGMMKQARGVFYKMPEKDCVSW 146
Query: 183 SVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVH 237
+ +V GY C +F +A+R + M V NEFT SVL C + + +H
Sbjct: 147 NAMVVGYAHCGRFSEALRFYGWMRRVCVGYNEFTFASVLIVCVKLKEFELCRQIH 201
>Medtr0011s0300.1 | PPR containing plant-like protein | HC |
scaffold0011:236494-238095 | 20130731
Length = 533
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 126/273 (46%), Gaps = 42/273 (15%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDP---------FMIYAQIFKLGFDLDRFAGNALI 51
M Q G+ + +TFP L+K + + +++ + G D + + I
Sbjct: 98 MLQNGIAVNNYTFPPLIKSCTALIAASSKCASSVMIGCLVHCHVVLFGLTNDAYVVSGFI 157
Query: 52 SAFANSGFIGSACQVFDESSVKDIIAWTALINGYVK-----------NDLPS-------- 92
++ G + A +FD++ KD++ WTA+I+GY K +++P
Sbjct: 158 EFYSALGELRKARVLFDQTGRKDVVLWTAMIDGYGKIGDVESAREMFDEMPERNVVSWSA 217
Query: 93 ------------EALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAG 140
E L F++M+S G + +V+VL A A G G WVH + +
Sbjct: 218 MMAAYSRVSEFREVLDLFLEMQSEGVRPNDSVLVTVLTACAHLGALTQGMWVHSYARRFD 277
Query: 141 RVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIR 200
RV + + +AL+DMY KCG + A VFD + S +DV W+ +++G + ++
Sbjct: 278 RVSSNPILATALVDMYSKCGCVESALSVFDGI--SDKDVGAWNAMISGVALNGDARKSLE 335
Query: 201 VFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
+F M+ PNE T +VL+AC H+ + +G
Sbjct: 336 LFQQMIVCGNKPNETTFVAVLTACTHARMVREG 368
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 124/275 (45%), Gaps = 51/275 (18%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIG---SACQVFDE--SSVKDIIAWTALINGY 85
++A I + +A ++S A S + A +F ++ +I Y
Sbjct: 23 LHAHILRCHIQHSPYALAPILSVAATSNYTSFFLYARSIFHNLTHRNRNTFIHNTMIRAY 82
Query: 86 VKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAA------------------------ 121
++N P+ A+ C+ M G V+ T ++++
Sbjct: 83 LQNHSPTHAVSCYTTMLQNGIAVNNYTFPPLIKSCTALIAASSKCASSVMIGCLVHCHVV 142
Query: 122 MAGDDNFGKWVHGF----------------YVQAGRVQLDGYVWSALMDMYFKCGHCDDA 165
+ G N V GF + Q GR D +W+A++D Y K G + A
Sbjct: 143 LFGLTNDAYVVSGFIEFYSALGELRKARVLFDQTGRK--DVVLWTAMIDGYGKIGDVESA 200
Query: 166 CKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACA 225
++FDEMP R+VV WS ++A Y + ++F++ + +F M S+ V PN+ L +VL+ACA
Sbjct: 201 REMFDEMPE--RNVVSWSAMMAAYSRVSEFREVLDLFLEMQSEGVRPNDSVLVTVLTACA 258
Query: 226 HSGALDQGKLVHQYI-ECKKVSLNSVELGTALVDM 259
H GAL QG VH Y +VS N + L TALVDM
Sbjct: 259 HLGALTQGMWVHSYARRFDRVSSNPI-LATALVDM 292
>Medtr8g088300.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:36572831-36570446 | 20130731
Length = 700
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/231 (31%), Positives = 119/231 (51%), Gaps = 5/231 (2%)
Query: 31 IYAQIFKLGF--DLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKN 88
I+ +FK GF LD F +L++ +A+ +G AC+VF E+ K+++ WTAL+ G N
Sbjct: 247 IHCCMFKFGFCCGLDEFVSASLVTFYASCKRMGDACKVFGETVCKNVVVWTALLTGCGLN 306
Query: 89 DLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYV 148
D EAL+ F +M + + S L + D G+ +H ++ G ++ Y
Sbjct: 307 DKHVEALEVFSEMMRFNVVPNESSFTSALNSCVGLEDLEKGRVIHAAGIKMG-LENAVYT 365
Query: 149 WSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSD 208
++L+ MY KCG DA VF + ++VV W+ ++ G Q A+ +F ML +
Sbjct: 366 GNSLVVMYSKCGFIGDALCVFKGI--CEKNVVSWNSVIVGCAQHGCGTWALVLFKEMLRE 423
Query: 209 NVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
V +E TLT +LSAC+ SG L + + Y K+ +VE +VD+
Sbjct: 424 GVESDEITLTGLLSACSRSGMLQKARCFFGYFARKRSMKLTVEHYACMVDV 474
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 120/222 (54%), Gaps = 7/222 (3%)
Query: 41 DLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVK 100
D D NA+++ + N+G + A ++F + +D+I+WT++I G +N +AL F
Sbjct: 155 DKDVATWNAMVNGYCNNGRVNDALRLFCQMPSRDVISWTSIIVGLDRNGKSYQALFFFKN 214
Query: 101 MRS-TGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGR-VQLDGYVWSALMDMYFK 158
M +G G+ + T+V L AAA D G +H + G LD +V ++L+ Y
Sbjct: 215 MVGFSGVGISSTTLVCGLSAAAKILDFYAGIQIHCCMFKFGFCCGLDEFVSASLVTFYAS 274
Query: 159 CGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLT 218
C DACKVF E ++VV W+ L+ G +K +A+ VF M+ NVVPNE + T
Sbjct: 275 CKRMGDACKVFGETV--CKNVVVWTALLTGCGLNDKHVEALEVFSEMMRFNVVPNESSFT 332
Query: 219 SVLSACAHSGALDQGKLVHQYIECKKVSL-NSVELGTALVDM 259
S L++C L++G+++H K+ L N+V G +LV M
Sbjct: 333 SALNSCVGLEDLEKGRVIHA--AGIKMGLENAVYTGNSLVVM 372
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 93/189 (49%), Gaps = 2/189 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKM-FSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M + V P++ +F L +E +I+A K+G + + GN+L+ ++ GF
Sbjct: 319 MMRFNVVPNESSFTSALNSCVGLEDLEKGRVIHAAGIKMGLENAVYTGNSLVVMYSKCGF 378
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
IG A VF K++++W ++I G ++ + AL F +M G D +T+ +L A
Sbjct: 379 IGDALCVFKGICEKNVVSWNSVIVGCAQHGCGTWALVLFKEMLREGVESDEITLTGLLSA 438
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
+ +G + G++ + ++L ++ ++D+ +CG ++A + MP +
Sbjct: 439 CSRSGMLQKARCFFGYFARKRSMKLTVEHYACMVDVLGRCGEVEEAEALATSMPVEANSM 498
Query: 180 VCWSVLVAG 188
V W VL++
Sbjct: 499 V-WLVLLSA 506
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 74/152 (48%), Gaps = 7/152 (4%)
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ SA VF++ + +T L+ Y N+ EA+ F ++ S D ++ SV++A
Sbjct: 46 LDSARAVFNKIPSPHVSLYTKLLLAYAHNNNLHEAINLFNQIPSNTK--DTISWNSVIKA 103
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
+ + D +V + Q + W+ ++ + G ++A + F+ MPY +DV
Sbjct: 104 SIICND-----FVTAVKLFDEMPQRNSISWTTIIHGFLSTGRVNEAERFFNAMPYVDKDV 158
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVV 211
W+ +V GY + DA+R+F M S +V+
Sbjct: 159 ATWNAMVNGYCNNGRVNDALRLFCQMPSRDVI 190
>Medtr8g106910.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:45147837-45154874 | 20130731
Length = 787
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 98/186 (52%), Gaps = 3/186 (1%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTG 107
N +IS + +G I A ++FD + +D ++W A+I GY + + + VKM+ G
Sbjct: 300 NTIISGYGQNGDIAQARELFDMMTQRDCVSWAAIIAGYAQTGHYEKVMHMLVKMKRDGKS 359
Query: 108 VDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACK 167
++ T L A GK VHG V+ G V +AL++MY KCG +A
Sbjct: 360 LNRSTFCCALSTCAGMAALVLGKQVHGQAVKTG-YDNGCLVGNALLEMYCKCGSIGEAYD 418
Query: 168 VFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHS 227
VF+ M +D++ W+ ++AGY + + A+ VF +M + P+E T+ VL AC+H+
Sbjct: 419 VFERM--QLKDIISWNTMLAGYARHGFGRQALLVFDSMKTAGFKPDEITMVGVLLACSHT 476
Query: 228 GALDQG 233
G D+G
Sbjct: 477 GLTDRG 482
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 98/212 (46%), Gaps = 12/212 (5%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTG 107
N +IS +A G + A ++F+ES V+D+ WTA++ YV++ + EA + F +M G
Sbjct: 207 NTMISGYARDGDLLQARRLFEESPVRDVFTWTAMVFAYVQSGMLDEARRVFDEM--PGKR 264
Query: 108 VDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACK 167
A V+ +AG + K + + W+ ++ Y + G A +
Sbjct: 265 EMAYNVM-------IAGYVQYKKMDMARELFEAMPCRNVGSWNTIISGYGQNGDIAQARE 317
Query: 168 VFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHS 227
+FD M + RD V W+ ++AGY Q ++ + + M D N T LS CA
Sbjct: 318 LFDMM--TQRDCVSWAAIIAGYAQTGHYEKVMHMLVKMKRDGKSLNRSTFCCALSTCAGM 375
Query: 228 GALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
AL GK VH K N +G AL++M
Sbjct: 376 AALVLGKQVHGQ-AVKTGYDNGCLVGNALLEM 406
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 88/184 (47%), Gaps = 8/184 (4%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
++ Q K G+D GNAL+ + G IG A VF+ +KDII+W ++ GY ++
Sbjct: 384 VHGQAVKTGYDNGCLVGNALLEMYCKCGSIGEAYDVFERMQLKDIISWNTMLAGYARHGF 443
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGR--VQLDGYV 148
+AL F M++ G D +T+V VL A + G + G FY + + +
Sbjct: 444 GRQALLVFDSMKTAGFKPDEITMVGVLLACSHTGLTDRG--TEYFYSMSKDYGITPNSKH 501
Query: 149 WSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLV-AGYVQCNKF--QDAIRVFWNM 205
++ ++D+ + G ++A + MP+ D W L+ A + N + A + +NM
Sbjct: 502 YNCMIDLLGRAGLLEEAHNLMRNMPFE-PDAATWGALLGASRIHGNAELGEKAAEMVFNM 560
Query: 206 LSDN 209
+N
Sbjct: 561 EPNN 564
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 100/207 (48%), Gaps = 29/207 (14%)
Query: 37 KLGFD----LDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPS 92
KL FD D + N L++ + +G + A ++F+ ++I+W L+ GYVK +
Sbjct: 130 KLVFDNMPYKDSISWNGLLAVYVQNGRLEEARRLFESKVDWELISWNCLMGGYVKRKMLG 189
Query: 93 EALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRV-----QLDGY 147
+A + F M +A++ +++ A GD +QA R+ D +
Sbjct: 190 DARRLFDHMPVR----NAISWNTMISGYARDGD----------LLQARRLFEESPVRDVF 235
Query: 148 VWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLS 207
W+A++ Y + G D+A +VFDEMP + + ++V++AGYVQ K A +F M
Sbjct: 236 TWTAMVFAYVQSGMLDEARRVFDEMP--GKREMAYNVMIAGYVQYKKMDMARELFEAMPC 293
Query: 208 DNVVPNEFTLTSVLSACAHSGALDQGK 234
NV + +++S +G + Q +
Sbjct: 294 RNV----GSWNTIISGYGQNGDIAQAR 316
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 94/211 (44%), Gaps = 37/211 (17%)
Query: 45 FAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRST 104
F+ N +++ + + + A +FD KD ++W +++GYV++ EA F M
Sbjct: 80 FSWNLMLTGYVKNRRLVDARNLFDLMPQKDAVSWNVMLSGYVRSGCVDEAKLVFDNMPYK 139
Query: 105 GTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYV-----------WSALM 153
D+++ +L YVQ GR++ + W+ LM
Sbjct: 140 ----DSISWNGLL----------------AVYVQNGRLEEARRLFESKVDWELISWNCLM 179
Query: 154 DMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPN 213
Y K DA ++FD MP R+ + W+ +++GY + A R+F ++ V +
Sbjct: 180 GGYVKRKMLGDARRLFDHMP--VRNAISWNTMISGYARDGDLLQARRLF----EESPVRD 233
Query: 214 EFTLTSVLSACAHSGALDQGKLVHQYIECKK 244
FT T+++ A SG LD+ + V + K+
Sbjct: 234 VFTWTAMVFAYVQSGMLDEARRVFDEMPGKR 264
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 57/112 (50%), Gaps = 13/112 (11%)
Query: 129 GKWVHGF--YVQAGRVQLDGYVWSAL--MDMYFKCGHCDDACKVFDEMPYSYRDVVCWSV 184
GK +H F VQ R D Y+ + + + GHC A +VFD MP Y+++ W++
Sbjct: 30 GKHLHNFCFPVQKAR---DTYIVKCTNSISTHMRNGHCHLALRVFDSMP--YKNLFSWNL 84
Query: 185 LVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLV 236
++ GYV+ + DA +F M + V + +LS SG +D+ KLV
Sbjct: 85 MLTGYVKNRRLVDARNLFDLMPQKDAV----SWNVMLSGYVRSGCVDEAKLV 132
>Medtr1g038860.1 | PPR containing plant-like protein | LC |
chr1:14313044-14316621 | 20130731
Length = 625
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 114/218 (52%), Gaps = 8/218 (3%)
Query: 34 QIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSE 93
++F+ + D + N +++ F +G + A Q+F K++I WTA++ GYV++ L E
Sbjct: 253 KLFERMPERDMPSWNTMVTGFIQNGDLNRAEQLFHAMPQKNVITWTAMMTGYVQHGLSEE 312
Query: 94 ALKCFVKMRST-GTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSAL 152
ALK F KM++ G T V+VL A + G+ +H + Q YV SAL
Sbjct: 313 ALKLFNKMQANDGLKPTTGTFVTVLGACSDLAGLPEGQQIHQM-ISKTVFQESTYVVSAL 371
Query: 153 MDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVP 212
++MY KCG A K+FD+ + D++ W+ ++A Y +AI +F M
Sbjct: 372 INMYSKCGDFHVAKKMFDDGLSGHMDLIAWNGMIAAYAHHGYGNEAINLFNKMQELGFQA 431
Query: 213 NEFTLTSVLSACAHSGALDQG------KLVHQYIECKK 244
N+ T +L+AC+H+G D+G L ++YI+ ++
Sbjct: 432 NDVTYVGLLTACSHAGLFDEGFKYFDELLKNRYIQVRE 469
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 109/214 (50%), Gaps = 15/214 (7%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTG 107
N +++A A+ G I A ++F+E +D+++WT ++ G KN A + F
Sbjct: 174 NTVMTALAHCGRIDDAERLFNEMRERDVVSWTTMVAGLSKNGRVDAAREVF--------- 224
Query: 108 VDALTVVSVLRAAAM-AGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDAC 166
D + + +V+ AM AG G++ + + D W+ ++ + + G + A
Sbjct: 225 -DKMPIRNVVSWNAMIAGYAQNGRFDEALKLFERMPERDMPSWNTMVTGFIQNGDLNRAE 283
Query: 167 KVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNM-LSDNVVPNEFTLTSVLSACA 225
++F MP ++V+ W+ ++ GYVQ ++A+++F M +D + P T +VL AC+
Sbjct: 284 QLFHAMPQ--KNVITWTAMMTGYVQHGLSEEALKLFNKMQANDGLKPTTGTFVTVLGACS 341
Query: 226 HSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
L +G+ +HQ I K V S + +AL++M
Sbjct: 342 DLAGLPEGQQIHQMI-SKTVFQESTYVVSALINM 374
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 94/207 (45%), Gaps = 46/207 (22%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTG 107
N IS G + A +VFDE S +D WT +I+GY+K L +EA K F +
Sbjct: 49 NYFISKLCREGKVNEARKVFDEMSKRDSCLWTTMISGYIKCGLINEARKLFDR------- 101
Query: 108 VDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACK 167
DA V VW+A++ Y K ++A +
Sbjct: 102 PDAQKSV--------------------------------IVWTAMVSGYIKMNRIEEAER 129
Query: 168 VFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHS 227
+F+EMP R+VV W+ ++ GY + + Q+A+ +F M NVV + +V++A AH
Sbjct: 130 LFNEMP--VRNVVSWNTMIDGYARNGRTQEALDLFGRMPERNVV----SWNTVMTALAHC 183
Query: 228 GALDQG-KLVHQYIECKKVSLNSVELG 253
G +D +L ++ E VS ++ G
Sbjct: 184 GRIDDAERLFNEMRERDVVSWTTMVAG 210
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 92/189 (48%), Gaps = 28/189 (14%)
Query: 18 KMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIA 77
K+F +P + +++ A++S + I A ++F+E V+++++
Sbjct: 97 KLFDRPDAQKSVIVWT---------------AMVSGYIKMNRIEEAERLFNEMPVRNVVS 141
Query: 78 WTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGD-DNFGKWVHGFY 136
W +I+GY +N EAL F +M + ++ +V+ A A G D+ + +
Sbjct: 142 WNTMIDGYARNGRTQEALDLFGRMPER----NVVSWNTVMTALAHCGRIDDAERLFNEMR 197
Query: 137 VQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQ 196
+ D W+ ++ K G D A +VFD+MP R+VV W+ ++AGY Q +F
Sbjct: 198 ------ERDVVSWTTMVAGLSKNGRVDAAREVFDKMPI--RNVVSWNAMIAGYAQNGRFD 249
Query: 197 DAIRVFWNM 205
+A+++F M
Sbjct: 250 EALKLFERM 258
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 91/192 (47%), Gaps = 14/192 (7%)
Query: 5 GVEPDQHTFPLLLKMFSKPV-VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSA 63
G++P TF +L S + + I+ I K F + +ALI+ ++ G A
Sbjct: 325 GLKPTTGTFVTVLGACSDLAGLPEGQQIHQMISKTVFQESTYVVSALINMYSKCGDFHVA 384
Query: 64 CQVFDE--SSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAA 121
++FD+ S D+IAW +I Y + +EA+ F KM+ G + +T V +L A +
Sbjct: 385 KKMFDDGLSGHMDLIAWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVGLLTACS 444
Query: 122 MAG--DDNFG---KWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSY 176
AG D+ F + + Y+Q V+ D Y + L+D+ + G D+A + + +
Sbjct: 445 HAGLFDEGFKYFDELLKNRYIQ---VREDHY--TCLIDLCGRAGRLDEALNIIEGLGKEV 499
Query: 177 RDVVCWSVLVAG 188
+ W L+AG
Sbjct: 500 -SLSLWGALLAG 510
>Medtr7g106930.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:43569310-43567382 | 20130731
Length = 526
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 114/206 (55%), Gaps = 10/206 (4%)
Query: 35 IFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEA 94
IFK+ D + +I + G + SA ++FD VK+++ W+ +INGY++N+ +A
Sbjct: 40 IFKMMGRFDVASWTCMIKGYFKCGDVDSARKLFDRMPVKNLVTWSTMINGYLRNNCFDKA 99
Query: 95 LKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVW--SAL 152
++ F + G + + VS A A G G+ Y A R+ LD V +A+
Sbjct: 100 VEIFEILIDEGLVANEVGAVS---ACAHLGALAAGEKA---YEHAIRINLDLNVILGTAI 153
Query: 153 MDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVP 212
+DMY +CG+ + A +VF+EM +DV+ W+ L++G ++A+ F+ M+ + +VP
Sbjct: 154 VDMYARCGNVEKAVRVFEEM--KEKDVISWTSLISGVAMHGYAEEALEYFYVMVKNGIVP 211
Query: 213 NEFTLTSVLSACAHSGALDQGKLVHQ 238
+ T T+VL A +H G +++G+ + +
Sbjct: 212 RDITFTAVLKAYSHGGLVEKGQEIFE 237
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 70/117 (59%), Gaps = 6/117 (5%)
Query: 143 QLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVF 202
+ D W+ ++ YFKCG D A K+FD MP +++V WS ++ GY++ N F A+ +F
Sbjct: 46 RFDVASWTCMIKGYFKCGDVDSARKLFDRMPV--KNLVTWSTMINGYLRNNCFDKAVEIF 103
Query: 203 WNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
++ + +V NE +SACAH GAL G+ +++ + LN + LGTA+VDM
Sbjct: 104 EILIDEGLVANE---VGAVSACAHLGALAAGEKAYEHAIRINLDLNVI-LGTAIVDM 156
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 82/173 (47%), Gaps = 6/173 (3%)
Query: 32 YAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLP 91
Y ++ DL+ G A++ +A G + A +VF+E KD+I+WT+LI+G +
Sbjct: 135 YEHAIRINLDLNVILGTAIVDMYARCGNVEKAVRVFEEMKEKDVISWTSLISGVAMHGYA 194
Query: 92 SEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSA 151
EAL+ F M G +T +VL+A + G G+ + + R++ +
Sbjct: 195 EEALEYFYVMVKNGIVPRDITFTAVLKAYSHGGLVEKGQEIFESMKRDYRLEPRLEHYGC 254
Query: 152 LMDMYFKCGHCDDACKVFDEMPYSYRDVV------CWSVLVAGYVQCNKFQDA 198
++D+ + G ++A EMP + +++L Y + NK++DA
Sbjct: 255 MVDLLGRAGKLEEAENFILEMPIKPNAPMKPEHSGYYALLSNIYARTNKWKDA 307
>Medtr7g011840.1 | PPR containing plant-like protein | HC |
chr7:3275571-3278623 | 20130731
Length = 605
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 123/228 (53%), Gaps = 5/228 (2%)
Query: 7 EPDQHTFPLLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQV 66
E D+ ++ +L F+K D ++F+ + D + + ++ ++ +G + A +
Sbjct: 218 ERDRVSWNTMLDGFTKAGEMDKAF---KLFERMAERDIVSWSTMVCGYSKNGDMDMARML 274
Query: 67 FDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDD 126
FD VK+++ WT +I+GY + EA+ +M +G +D +S+L A A +G
Sbjct: 275 FDRCPVKNLVLWTTIISGYAEKGQVKEAMNLCDEMEKSGLRLDDGFFISILAACAESGML 334
Query: 127 NFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLV 186
GK +H ++++ R + V ++ +DMY KCG DDA +VF+ M + +D+V W+ ++
Sbjct: 335 GLGKKMHDSFLRS-RFRCSTKVLNSFIDMYAKCGCVDDAFRVFNGMK-TEKDLVSWNSMI 392
Query: 187 AGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGK 234
G+ + +I +F M+ + P+ +T +L AC H+G +++G+
Sbjct: 393 HGFGIHGHGEKSIELFNTMVREGFKPDRYTFIGLLCACTHAGLVNEGR 440
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 120/256 (46%), Gaps = 18/256 (7%)
Query: 1 MRQKGVEPDQHTFPLLLK--MFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSG 58
M GV D T+P LLK S + M++A + KLGF D F N+LI + G
Sbjct: 114 MHVDGVLADNFTYPFLLKGCNGSSSWLSLVKMVHAHVEKLGFYWDIFVPNSLIDCYCRCG 173
Query: 59 FIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLR 118
+ A +VF +D+++W +++ G VKN ALK F +M D ++ ++L
Sbjct: 174 DVEMAMKVFSGMEERDVVSWNSMVGGLVKNGDLDGALKVFDEMPER----DRVSWNTMLD 229
Query: 119 AAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRD 178
AG+ + F + + D WS ++ Y K G D A +FD P ++
Sbjct: 230 GFTKAGEMD-----KAFKLFERMAERDIVSWSTMVCGYSKNGDMDMARMLFDRCP--VKN 282
Query: 179 VVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVH- 237
+V W+ +++GY + + ++A+ + M + ++ S+L+ACA SG L GK +H
Sbjct: 283 LVLWTTIISGYAEKGQVKEAMNLCDEMEKSGLRLDDGFFISILAACAESGMLGLGKKMHD 342
Query: 238 ----QYIECKKVSLNS 249
C LNS
Sbjct: 343 SFLRSRFRCSTKVLNS 358
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 105/232 (45%), Gaps = 20/232 (8%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
I+AQ+ K D + LI++++ + + SA VF++ ++ + LI Y +
Sbjct: 41 IHAQLIKCHLHQDPYIAPKLIASYSLTNNLSSAVNVFNQVPDPNVHLYNYLIRAYSLSGN 100
Query: 91 PSEALKCF---VKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGY 147
S +L F +KM G D T +L+ G + W+ + V+ G+
Sbjct: 101 ESNSLCAFGVLLKMHVDGVLADNFTYPFLLK-----GCNGSSSWLSLVKMVHAHVEKLGF 155
Query: 148 VW-----SALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVF 202
W ++L+D Y +CG + A KVF M RDVV W+ +V G V+ A++VF
Sbjct: 156 YWDIFVPNSLIDCYCRCGDVEMAMKVFSGM--EERDVVSWNSMVGGLVKNGDLDGALKVF 213
Query: 203 WNMLSDNVVPNEFTLTSVLSACAHSGALDQG-KLVHQYIECKKVSLNSVELG 253
M + V + ++L +G +D+ KL + E VS +++ G
Sbjct: 214 DEMPERDRV----SWNTMLDGFTKAGEMDKAFKLFERMAERDIVSWSTMVCG 261
>Medtr2g071810.1 | PPR containing plant-like protein | HC |
chr2:30002268-30006207 | 20130731
Length = 789
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 112/200 (56%), Gaps = 3/200 (1%)
Query: 34 QIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSE 93
++F+ + D + A+I FA G IG A ++FD KD WT LI+G+V N+ E
Sbjct: 344 EVFERMPEKDLISWTAMIRGFATDGRIGKAVELFDTLKEKDDFVWTVLISGFVSNEEYEE 403
Query: 94 ALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALM 153
AL FV+M + LT+ SVL A+A N G +H +V ++ D + ++L+
Sbjct: 404 ALHWFVRMSREQCRPNPLTISSVLSASASLVALNEGLQIHS-HVLKMNLEYDLSIQNSLI 462
Query: 154 DMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPN 213
Y KCG+ DA K+F ++ +VV ++ ++ G+ Q ++A+ ++ M ++++ PN
Sbjct: 463 SFYAKCGNVTDAYKIFVDVVEP--NVVSYNSVINGFAQNGFGEEALSMYKRMQNESLEPN 520
Query: 214 EFTLTSVLSACAHSGALDQG 233
T +VLSAC H+G +++G
Sbjct: 521 RVTFLAVLSACTHAGLIEEG 540
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 96/197 (48%), Gaps = 10/197 (5%)
Query: 49 ALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTG-TG 107
A++ G I +A +FD +++++W+A+I+GY++ L F+ MR G
Sbjct: 195 AVVGGLCRDGRIDNARMLFDRMPERNVVSWSAMIDGYMEKGLFENGFGLFLDMRREGVVE 254
Query: 108 VDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACK 167
V++ T+ +++ G G +HG + G + + + ++ MY G+ D A K
Sbjct: 255 VNSTTMTIMIKGCGNCGRVKEGIQIHGLVSRLG-FEFGSVLSNTIITMYSLFGYTDMAKK 313
Query: 168 VFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHS 227
VF M +D+V W+ L++GY+ N+ A VF M +++ + T+++ A
Sbjct: 314 VFSGM--GNKDLVTWNSLISGYIYNNEVDAAYEVFERMPEKDLI----SWTAMIRGFATD 367
Query: 228 GALDQGKLVHQYIECKK 244
G + GK V + K+
Sbjct: 368 GRI--GKAVELFDTLKE 382
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 110/242 (45%), Gaps = 44/242 (18%)
Query: 1 MRQKGV-EPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSG 58
MR++GV E + T +++K V++ I+ + +LGF+ N +I+ ++ G
Sbjct: 247 MRREGVVEVNSTTMTIMIKGCGNCGRVKEGIQIHGLVSRLGFEFGSVLSNTIITMYSLFG 306
Query: 59 FIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLR 118
+ A +VF KD++ W +LI+GY+ N+ A + F +M
Sbjct: 307 YTDMAKKVFSGMGNKDLVTWNSLISGYIYNNEVDAAYEVFERM----------------- 349
Query: 119 AAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRD 178
+ D W+A++ + G A ++FD + +D
Sbjct: 350 -----------------------PEKDLISWTAMIRGFATDGRIGKAVELFDTL--KEKD 384
Query: 179 VVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQ 238
W+VL++G+V ++++A+ F M + PN T++SVLSA A AL++G +H
Sbjct: 385 DFVWTVLISGFVSNEEYEEALHWFVRMSREQCRPNPLTISSVLSASASLVALNEGLQIHS 444
Query: 239 YI 240
++
Sbjct: 445 HV 446
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 96/222 (43%), Gaps = 40/222 (18%)
Query: 49 ALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLP-SEALKCFVKMRSTGTG 107
A+++ +A +G I +A ++FDE + + A+I+GY++N ++A + F
Sbjct: 66 AMLTVYAQNGQITTARKLFDEMPERTTATYNAMISGYIRNGCNVTKAYELFTSFHDRNEV 125
Query: 108 VDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACK 167
A ++ +++A Y +A D +AL++ Y K G ++A +
Sbjct: 126 SYAAMIMGLVKARKF-------DLAEKLYREAPHEFRDPVCSNALINGYLKIGEMNEALR 178
Query: 168 VFDEMPYSYRDVVCWSVLVA-------------------------------GYVQCNKFQ 196
VF+ + S RDVV WS +V GY++ F+
Sbjct: 179 VFENVGVSKRDVVSWSAVVGGLCRDGRIDNARMLFDRMPERNVVSWSAMIDGYMEKGLFE 238
Query: 197 DAIRVFWNMLSDNVVP-NEFTLTSVLSACAHSGALDQGKLVH 237
+ +F +M + VV N T+T ++ C + G + +G +H
Sbjct: 239 NGFGLFLDMRREGVVEVNSTTMTIMIKGCGNCGRVKEGIQIH 280
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 75/158 (47%), Gaps = 8/158 (5%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTG 107
N IS +G + +A +F+ S K+I+ WTA++ Y +N + A K F +M T
Sbjct: 34 NVKISENGRNGNVNAAETIFNRMSQKNIVTWTAMLTVYAQNGQITTARKLFDEMPERTTA 93
Query: 108 VDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACK 167
+ +R N K F R ++ ++A++ K D A K
Sbjct: 94 TYNAMISGYIRNGC-----NVTKAYELFTSFHDRNEVS---YAAMIMGLVKARKFDLAEK 145
Query: 168 VFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNM 205
++ E P+ +RD VC + L+ GY++ + +A+RVF N+
Sbjct: 146 LYREAPHEFRDPVCSNALINGYLKIGEMNEALRVFENV 183
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 80/163 (49%), Gaps = 5/163 (3%)
Query: 27 DPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYV 86
+ I++ + K+ + D N+LIS +A G + A ++F + +++++ ++ING+
Sbjct: 438 EGLQIHSHVLKMNLEYDLSIQNSLISFYAKCGNVTDAYKIFVDVVEPNVVSYNSVINGFA 497
Query: 87 KNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGR--VQL 144
+N EAL + +M++ + +T ++VL A AG G W + F R ++
Sbjct: 498 QNGFGEEALSMYKRMQNESLEPNRVTFLAVLSACTHAGLIEEG-W-NLFNTMKSRYGIEP 555
Query: 145 DGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVA 187
+ ++ ++D+ + G D+A MP V W L+A
Sbjct: 556 EADHYACMVDLLGRAGLLDEAIHFVRSMPLEPHSGV-WGALLA 597
>Medtr2g026210.1 | PPR containing plant-like protein | HC |
chr2:9478558-9480181 | 20130731
Length = 467
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 105/203 (51%), Gaps = 3/203 (1%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
I+A + +G+ + + L+ +A SG + +A +F+ KD AW A+I GYV+ L
Sbjct: 76 IHAHMIIVGYVPNEYLKIKLLILYAKSGCLETAQFLFNNLVEKDSFAWNAMIAGYVQKGL 135
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
L+ F +MR D T SV RA A G+ HG ++ ++ + V S
Sbjct: 136 EEVGLETFYEMRQASLRPDQYTFASVFRACATLALLEPGRQAHGVMLKC-QIGDNVVVNS 194
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV 210
AL+DMYFKC D +FD+ R+ + W+ L++GY + + + + F M+S++
Sbjct: 195 ALIDMYFKCSCICDGRLLFDKCL--SRNTITWTTLISGYGKHGQVVEVLDSFHRMISESF 252
Query: 211 VPNEFTLTSVLSACAHSGALDQG 233
PN T +VL AC+H G +D+
Sbjct: 253 RPNYVTFLAVLVACSHVGLIDEA 275
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 89/199 (44%), Gaps = 7/199 (3%)
Query: 61 GSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAA 120
G F S K+ ++ G + +A++ + TG V T +L+
Sbjct: 8 GKIFSAFRSSLAKNTQNLDKVLQGLCVSGKLEDAIRLLYR---TGFPVHPRTYSLMLQEC 64
Query: 121 AMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVV 180
+ G+ +H + G V + Y+ L+ +Y K G + A +F+ + +D
Sbjct: 65 IFWKNYGRGRRIHAHMIIVGYVP-NEYLKIKLLILYAKSGCLETAQFLFNNL--VEKDSF 121
Query: 181 CWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYI 240
W+ ++AGYVQ + + F+ M ++ P+++T SV ACA L+ G+ H +
Sbjct: 122 AWNAMIAGYVQKGLEEVGLETFYEMRQASLRPDQYTFASVFRACATLALLEPGRQAHGVM 181
Query: 241 ECKKVSLNSVELGTALVDM 259
++ N V + +AL+DM
Sbjct: 182 LKCQIGDNVV-VNSALIDM 199
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 84/190 (44%), Gaps = 4/190 (2%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDP-FMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
MRQ + PDQ+TF + + + + +P + + K + +ALI +
Sbjct: 146 MRQASLRPDQYTFASVFRACATLALLEPGRQAHGVMLKCQIGDNVVVNSALIDMYFKCSC 205
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
I +FD+ ++ I WT LI+GY K+ E L F +M S + +T ++VL A
Sbjct: 206 ICDGRLLFDKCLSRNTITWTTLISGYGKHGQVVEVLDSFHRMISESFRPNYVTFLAVLVA 265
Query: 120 AAMAG-DDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRD 178
+ G D K+ ++ + ++A++D+ + G +A + + PY
Sbjct: 266 CSHVGLIDEAYKYFQSM-IRDYEMVPHAKHYAAMVDLLGRSGKLKEAYEFVLKSPYKEHS 324
Query: 179 VVCWSVLVAG 188
V+ W L+
Sbjct: 325 VI-WGALLGA 333
>Medtr3g027990.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:8840204-8842727 | 20130731
Length = 623
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 117/217 (53%), Gaps = 6/217 (2%)
Query: 21 SKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDE--SSVKDIIAW 78
S+ ++ + ++ KLG + NAL++ + GF+ SA ++F E S K I++W
Sbjct: 159 SEKACDEGYYVHCCAMKLGLVYEVKVVNALVNMYGKFGFVESAFRLFSEMPESEKSIVSW 218
Query: 79 TALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQ 138
+++ +N +P+EA CF MR G D T+VS+L+A + +HG
Sbjct: 219 NSIVAVCAQNGMPNEAFNCFDMMRVNGFFPDDATMVSLLQACENFPLGRMVEVLHGVIFT 278
Query: 139 AGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDA 198
G + + + + L+++Y K G +++ KVF+E+ S D V W+ ++AGY ++A
Sbjct: 279 CG-LDENLTIVTTLLNLYSKLGRLNNSRKVFEEI--SKPDKVAWTAMLAGYAMHGCGKEA 335
Query: 199 IRVFWNMLSDN-VVPNEFTLTSVLSACAHSGALDQGK 234
I F ++ + + P+ T T +LSAC+HSG + +GK
Sbjct: 336 IEFFERIVREEGMEPDHVTFTHLLSACSHSGLVKEGK 372
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 106/211 (50%), Gaps = 2/211 (0%)
Query: 15 LLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKD 74
L+L + S V +I+A + K D F G+ L+S + G A +FDE KD
Sbjct: 51 LILHLKSSSSVSICRIIHAHVIKSLDYRDGFIGDQLVSCYLKMGPTKDAYLLFDEMPKKD 110
Query: 75 IIAWTALINGYVKNDLPSEALKCFVKMRS-TGTGVDALTVVSVLRAAAMAGDDNFGKWVH 133
++W +L++G K E L F KM+S + ++ T +SV+ A + G +VH
Sbjct: 111 FVSWNSLVSGLAKIGQLGECLSVFCKMKSDSELKLNEFTFLSVISACVSEKACDEGYYVH 170
Query: 134 GFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCN 193
++ G V + V +AL++MY K G + A ++F EMP S + +V W+ +VA Q
Sbjct: 171 CCAMKLGLV-YEVKVVNALVNMYGKFGFVESAFRLFSEMPESEKSIVSWNSIVAVCAQNG 229
Query: 194 KFQDAIRVFWNMLSDNVVPNEFTLTSVLSAC 224
+A F M + P++ T+ S+L AC
Sbjct: 230 MPNEAFNCFDMMRVNGFFPDDATMVSLLQAC 260
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 93/195 (47%), Gaps = 2/195 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
MR G PD T LL+ P+ +++ IF G D + L++ ++ G
Sbjct: 241 MRVNGFFPDDATMVSLLQACENFPLGRMVEVLHGVIFTCGLDENLTIVTTLLNLYSKLGR 300
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKM-RSTGTGVDALTVVSVLR 118
+ ++ +VF+E S D +AWTA++ GY + EA++ F ++ R G D +T +L
Sbjct: 301 LNNSRKVFEEISKPDKVAWTAMLAGYAMHGCGKEAIEFFERIVREEGMEPDHVTFTHLLS 360
Query: 119 AAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRD 178
A + +G GK+ +VQ +S ++D+ +CG DDA ++ MP+
Sbjct: 361 ACSHSGLVKEGKYFFRVMSDVYKVQPRLDHYSCMVDLLGRCGLLDDAHELIKNMPFEPNS 420
Query: 179 VVCWSVLVAGYVQCN 193
V ++L A V N
Sbjct: 421 GVWGALLGACRVHRN 435
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 145 DGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWN 204
DG++ L+ Y K G DA +FDEMP +D V W+ LV+G + + + + VF
Sbjct: 79 DGFIGDQLVSCYLKMGPTKDAYLLFDEMPK--KDFVSWNSLVSGLAKIGQLGECLSVFCK 136
Query: 205 MLSDNVVP-NEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLN---SVELGTALVDM 259
M SD+ + NEFT SV+SAC A D+G Y+ C + L V++ ALV+M
Sbjct: 137 MKSDSELKLNEFTFLSVISACVSEKACDEG----YYVHCCAMKLGLVYEVKVVNALVNM 191
>Medtr1g039030.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:14398657-14402125 | 20130731
Length = 960
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 110/223 (49%), Gaps = 12/223 (5%)
Query: 21 SKPVVEDPFMIYAQ---------IFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESS 71
S PV +YA+ +F+L + + A+I+AF+ SG IG A FD
Sbjct: 413 SAPVGNAIITMYAKCGDTDKADLVFRLMPLRNTISWTAMITAFSRSGDIGKARGYFDMMP 472
Query: 72 VKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKW 131
++I+ W ++++ YV+N E LK +V MRS G D +T + +RA A G
Sbjct: 473 ERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRSNGVQPDWITFTTSIRACADLAIVKLGMQ 532
Query: 132 VHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQ 191
V + G + L+ V ++++ MY +CG +A FD + +D++ W+ ++A + Q
Sbjct: 533 VVTHATKFG-LSLNVSVANSIVTMYSRCGLIKEAKNTFDSI--DDKDLISWNAMLAAFAQ 589
Query: 192 CNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGK 234
I F +ML PN + SVLS C+H G + +GK
Sbjct: 590 NGLGIKVIDTFEDMLKTECKPNHISYVSVLSGCSHMGLVAEGK 632
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 120/258 (46%), Gaps = 31/258 (12%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
++A+I ++ LD GN LI +A G + A +VF D I+W +LI G V L
Sbjct: 300 LHARILRMEHSLDLVFGNGLIDMYAKCGCLDLAKRVFKSLREHDHISWNSLITGVVHFGL 359
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
+AL F +MR + +D + ++L + + G+ +HG+ +++G + V +
Sbjct: 360 GEDALILFNQMRRSSVVLDEFILPTILGVCSGPDYASTGELLHGYTIKSG-MGSSAPVGN 418
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYS-----------------------------YRDVVC 181
A++ MY KCG D A VF MP R++V
Sbjct: 419 AIITMYAKCGDTDKADLVFRLMPLRNTISWTAMITAFSRSGDIGKARGYFDMMPERNIVT 478
Query: 182 WSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIE 241
W+ +++ YVQ ++ ++++ +M S+ V P+ T T+ + ACA + G V +
Sbjct: 479 WNSMLSTYVQNGFSEEGLKLYVSMRSNGVQPDWITFTTSIRACADLAIVKLGMQVVTHAT 538
Query: 242 CKKVSLNSVELGTALVDM 259
+SLN V + ++V M
Sbjct: 539 KFGLSLN-VSVANSIVTM 555
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 110/223 (49%), Gaps = 7/223 (3%)
Query: 40 FDLDR---FAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALK 96
FD++R F N++I ++ A Q+F+ +D ++W LI+ + ++ + L
Sbjct: 205 FDIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLA 264
Query: 97 CFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMY 156
FV+M + G + +T SVL A A D +G +H ++ LD + L+DMY
Sbjct: 265 MFVEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEH-SLDLVFGNGLIDMY 323
Query: 157 FKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFT 216
KCG D A +VF + D + W+ L+ G V +DA+ +F M +VV +EF
Sbjct: 324 AKCGCLDLAKRVFKSL--REHDHISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFI 381
Query: 217 LTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
L ++L C+ G+L+H Y K +S +G A++ M
Sbjct: 382 LPTILGVCSGPDYASTGELLHGYT-IKSGMGSSAPVGNAIITM 423
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 115/261 (44%), Gaps = 37/261 (14%)
Query: 34 QIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDES--SVKDIIAWTALINGYVKNDLP 91
Q+F+ + F N +I A +S + A ++FDE VKD ++WT +I+GY +N
Sbjct: 64 QVFQETHHRNIFTWNTMIRALVSSSRMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFH 123
Query: 92 SEALKCFVKM-RST---GTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGY 147
S + + F M R T G D + SV++A GD +H + G ++
Sbjct: 124 SRSFETFSLMIRDTNDGGKNYDPFSFTSVMKACGSLGDSRLAIQLHALVSKLG-FGMETC 182
Query: 148 VWSALMDMYFKCGHCDDACKVF-----------DEMPYSY------------------RD 178
+ ++++ MY KCG D A VF + M Y Y RD
Sbjct: 183 IQNSVVGMYVKCGDVDLAETVFFDIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERD 242
Query: 179 VVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQ 238
V W+ L++ + Q + +F M + PN T SVLSACA + L G +H
Sbjct: 243 EVSWNTLISIFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHA 302
Query: 239 YIECKKVSLNSVELGTALVDM 259
I + SL+ V G L+DM
Sbjct: 303 RILRMEHSLDLV-FGNGLIDM 322
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 83/188 (44%), Gaps = 2/188 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
MR GV+PD TF ++ + +V+ + K G L+ N++++ ++ G
Sbjct: 502 MRSNGVQPDWITFTTSIRACADLAIVKLGMQVVTHATKFGLSLNVSVANSIVTMYSRCGL 561
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
I A FD KD+I+W A++ + +N L + + F M T + ++ VSVL
Sbjct: 562 IKEAKNTFDSIDDKDLISWNAMLAAFAQNGLGIKVIDTFEDMLKTECKPNHISYVSVLSG 621
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
+ G GK + + +S ++D+ + G + A + + MP+
Sbjct: 622 CSHMGLVAEGKHYFDSMTRVFGISPTNEHFSCMVDLLGRAGLLEQAKDLIEGMPFKPNAT 681
Query: 180 VCWSVLVA 187
V WS L+
Sbjct: 682 V-WSALLG 688
>Medtr4g094692.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:38735797-38738097 | 20130731
Length = 766
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 129/267 (48%), Gaps = 16/267 (5%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPV-----VEDPFMIYAQIFKLGFDLDRFAGNALISAFA 55
M + GV P++ TF + SK V + ++ ++ G D + G ALI+ ++
Sbjct: 261 MIENGVSPNKTTFLCI----SKAVGLLGDINRCHEVHRYAYEWGLDSNTSVGTALINMYS 316
Query: 56 NSGFIGSACQVFDESSVKDII--AWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTV 113
G + A +FD ++ W A+I GY + EAL+ F +M D T
Sbjct: 317 KCGVLCDARVLFDSKFANCLVNAPWNAMITGYSQAGCHLEALEMFTRMCQNDVKPDLYTF 376
Query: 114 VSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMP 173
V + A K HG ++ G ++ V +AL D Y KC + KVF +M
Sbjct: 377 CCVFNSIAGLKCLKSLKEAHGVALKCGFDAMEISVLNALADAYVKCESLEAGEKVFYKM- 435
Query: 174 YSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
+D+V W+ +V Y QC+++ A+ +F M ++ PN FT +SV++AC L+ G
Sbjct: 436 -EKKDIVSWTTMVTAYCQCSEWGKALAIFSQMCNEGFAPNHFTFSSVITACGGLCLLEYG 494
Query: 234 KLVHQYIECKKVSLNSVE-LGTALVDM 259
+ +H I C K SL++ + +AL+DM
Sbjct: 495 QQIHGLI-C-KASLDAESCIESALIDM 519
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 119/243 (48%), Gaps = 5/243 (2%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFD-LDRFAGNALISAFANSG 58
M Q V+PD +TF + + ++ + K GFD ++ NAL A+
Sbjct: 364 MCQNDVKPDLYTFCCVFNSIAGLKCLKSLKEAHGVALKCGFDAMEISVLNALADAYVKCE 423
Query: 59 FIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLR 118
+ + +VF + KDI++WT ++ Y + +AL F +M + G + T SV+
Sbjct: 424 SLEAGEKVFYKMEKKDIVSWTTMVTAYCQCSEWGKALAIFSQMCNEGFAPNHFTFSSVIT 483
Query: 119 AAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRD 178
A +G+ +HG +A + + + SAL+DMY KCG+ +A +F+ + S D
Sbjct: 484 ACGGLCLLEYGQQIHGLICKAS-LDAESCIESALIDMYSKCGNLTEAKNIFERI--SNPD 540
Query: 179 VVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQ 238
V W+ +++ Y Q +DA+++F M V N TL +L AC+H G ++ G +
Sbjct: 541 TVTWTAIISTYAQHGLVEDALQLFRKMEQSAVKANAVTLLCILFACSHGGMVEDGLEIFN 600
Query: 239 YIE 241
+E
Sbjct: 601 QME 603
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 100/208 (48%), Gaps = 1/208 (0%)
Query: 30 MIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKND 89
M++AQ+ GF + G +L++ +A G + VF+ + + ++W A+I+G+ N
Sbjct: 190 MVHAQVVVRGFLMHAVVGTSLLNLYAKLGMCECSVNVFNNMTDVNDVSWNAMISGFTSNG 249
Query: 90 LPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVW 149
L +A + M G + T + + +A + GD N VH + + G + + V
Sbjct: 250 LYLQAFDFLINMIENGVSPNKTTFLCISKAVGLLGDINRCHEVHRYAYEWG-LDSNTSVG 308
Query: 150 SALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDN 209
+AL++MY KCG DA +FD + W+ ++ GY Q +A+ +F M ++
Sbjct: 309 TALINMYSKCGVLCDARVLFDSKFANCLVNAPWNAMITGYSQAGCHLEALEMFTRMCQND 368
Query: 210 VVPNEFTLTSVLSACAHSGALDQGKLVH 237
V P+ +T V ++ A L K H
Sbjct: 369 VKPDLYTFCCVFNSIAGLKCLKSLKEAH 396
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 112/233 (48%), Gaps = 10/233 (4%)
Query: 31 IYAQIFKLGF-DLDRFAG-NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKN 88
I+ + K GF D D N ++ A++ SA +VFD S +++ +WT +I ++
Sbjct: 88 IHGHVLKSGFGDRDNLVFLNHVVHAYSKCKDYDSARKVFDGMSERNVFSWTVMIVASNEH 147
Query: 89 DLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYV 148
AL+ F M G +D +VL++ FG+ VH V G + + V
Sbjct: 148 GYYRYALELFCMMLEQGLLLDGFAFSAVLQSCVGLDSVVFGEMVHAQVVVRGFL-MHAVV 206
Query: 149 WSALMDMYFKCGHCDDACKVFDEMPYSYRDV--VCWSVLVAGYVQCNKFQDAIRVFWNML 206
++L+++Y K G C+ + VF+ M DV V W+ +++G+ + A NM+
Sbjct: 207 GTSLLNLYAKLGMCECSVNVFNNMT----DVNDVSWNAMISGFTSNGLYLQAFDFLINMI 262
Query: 207 SDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
+ V PN+ T + A G +++ VH+Y + N+ +GTAL++M
Sbjct: 263 ENGVSPNKTTFLCISKAVGLLGDINRCHEVHRYAYEWGLDSNT-SVGTALINM 314
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 90/194 (46%), Gaps = 1/194 (0%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKP-VVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M +G P+ TF ++ ++E I+ I K D + +ALI ++ G
Sbjct: 466 MCNEGFAPNHFTFSSVITACGGLCLLEYGQQIHGLICKASLDAESCIESALIDMYSKCGN 525
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ A +F+ S D + WTA+I+ Y ++ L +AL+ F KM + +A+T++ +L A
Sbjct: 526 LTEAKNIFERISNPDTVTWTAIISTYAQHGLVEDALQLFRKMEQSAVKANAVTLLCILFA 585
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
+ G G + V + ++ ++D+ + G D+A D+MP ++
Sbjct: 586 CSHGGMVEDGLEIFNQMEGTYGVVPEMEHYACVVDLLGRVGRLDEAVAFIDKMPIEPDEM 645
Query: 180 VCWSVLVAGYVQCN 193
V ++L A + N
Sbjct: 646 VWQTLLGACRIHGN 659
>Medtr1g040565.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:15020896-15019352 | 20130731
Length = 514
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 127/249 (51%), Gaps = 19/249 (7%)
Query: 25 VEDPFMIYAQI-FKLGFDLDRFAGNALISAFANSGFIGSACQVF----DESSVKDIIAWT 79
+ED +Y ++ FK D NA+++ ++ +G A +F +E D++ W+
Sbjct: 1 MEDASKVYERMRFK-----DVVTWNAMVTGYSQNGRFEDALSLFGKMREERIELDVVTWS 55
Query: 80 ALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGF---Y 136
++I+GY + EA+ F +M + +T++S+L A G GK H + +
Sbjct: 56 SVISGYAQRGFGCEAMDVFRQMCGCSCRPNVVTLMSLLSGCASVGALLHGKETHCYSIKF 115
Query: 137 VQAGRVQLDG---YVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCN 193
+ G D +AL+DMY KC + A +FDE+ RDVV W+V++ GY Q
Sbjct: 116 ILKGEHNDDNDDLAGINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQYG 175
Query: 194 KFQDAIRVFWNMLS-DN-VVPNEFTLTSVLSACAHSGALDQGKLVHQYI-ECKKVSLNSV 250
A+++F M DN +VPN+FT++ VL ACA AL GK +H Y+ ++ + +
Sbjct: 176 DANHALQLFSEMFKFDNCIVPNDFTISCVLMACARLAALRFGKQIHAYVLRRSRIDSDVL 235
Query: 251 ELGTALVDM 259
+ L+DM
Sbjct: 236 FVANCLIDM 244
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/199 (35%), Positives = 103/199 (51%), Gaps = 8/199 (4%)
Query: 41 DLDRFAG-NALISAFANSGFIGSACQVFDESSVKD--IIAWTALINGYVKNDLPSEALKC 97
D D AG NALI +A + A +FDE KD ++ WT +I GY + + AL+
Sbjct: 124 DNDDLAGINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQYGDANHALQL 183
Query: 98 FVKMRSTGTGV--DALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDG-YVWSALMD 154
F +M + + T+ VL A A FGK +H + ++ R+ D +V + L+D
Sbjct: 184 FSEMFKFDNCIVPNDFTISCVLMACARLAALRFGKQIHAYVLRRSRIDSDVLFVANCLID 243
Query: 155 MYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNE 214
MY K G D A VFD M S R+ + W+ L+ GY +DA RVF M + +V +
Sbjct: 244 MYSKSGDVDTAQVVFDSM--SKRNAISWTSLLTGYGMHGCSEDAFRVFDEMRKEALVLDG 301
Query: 215 FTLTSVLSACAHSGALDQG 233
T VL AC+HSG +D+G
Sbjct: 302 ITFLVVLYACSHSGMVDRG 320
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 76/151 (50%), Gaps = 4/151 (2%)
Query: 45 FAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRST 104
F N LI ++ SG + +A VFD S ++ I+WT+L+ GY + +A + F +MR
Sbjct: 236 FVANCLIDMYSKSGDVDTAQVVFDSMSKRNAISWTSLLTGYGMHGCSEDAFRVFDEMRKE 295
Query: 105 GTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYV--WSALMDMYFKCGHC 162
+D +T + VL A + +G + G + FY + +D V ++ + D++ + G
Sbjct: 296 ALVLDGITFLVVLYACSHSGMVDRG--IDLFYRMSKDFVVDPGVEHYACMADLFGRAGRL 353
Query: 163 DDACKVFDEMPYSYRDVVCWSVLVAGYVQCN 193
+A ++ ++M VV ++L A N
Sbjct: 354 CEATRLINDMSMEPTPVVWIALLSACRTHSN 384
>Medtr4g099480.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:41303481-41301142 | 20130731
Length = 634
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 97/186 (52%), Gaps = 3/186 (1%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTG 107
A+I+ + G +G A +F + S+K ++ W A+I GYV N LK F M TG
Sbjct: 200 TAMITGYMKFGRVGLAEMLFWKLSLKTLVTWNAMIAGYVDNGRAENGLKLFKTMLETGVK 259
Query: 108 VDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACK 167
+AL++ SVL + GK VH ++ + D ++L+ MY KCG D+
Sbjct: 260 PNALSLTSVLLGCSDLSALQTGKQVHQLVCKSP-LSRDTTAVTSLISMYSKCGDLKDSWD 318
Query: 168 VFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHS 227
+F ++P +DVV W+ +++GY Q + A+ +F M + P+ T +VL AC H+
Sbjct: 319 LFVQIPR--KDVVTWNAMISGYAQHGAGEKALHLFDEMKKSEIKPDWITFVAVLLACNHA 376
Query: 228 GALDQG 233
G +D G
Sbjct: 377 GMVDLG 382
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 108/226 (47%), Gaps = 12/226 (5%)
Query: 34 QIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSE 93
Q+F + + + N +++ + + I +A FD V+D +W +++GY + + E
Sbjct: 93 QLFDKIPEPNTVSYNTMLACYLHHFGIHNARDFFDWMPVRDTASWNTMLSGYAQVRMMDE 152
Query: 94 ALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALM 153
A + V M + +T +++ GD + V FY + + W+A++
Sbjct: 153 ARRLLVAMPEK----NCVTWSAMVSGYVACGDLDAA--VECFYAAPMKSVI---TWTAMI 203
Query: 154 DMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPN 213
Y K G A +F ++ S + +V W+ ++AGYV + ++ +++F ML V PN
Sbjct: 204 TGYMKFGRVGLAEMLFWKL--SLKTLVTWNAMIAGYVDNGRAENGLKLFKTMLETGVKPN 261
Query: 214 EFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
+LTSVL C+ AL GK VHQ + CK T+L+ M
Sbjct: 262 ALSLTSVLLGCSDLSALQTGKQVHQLV-CKSPLSRDTTAVTSLISM 306
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 86/188 (45%), Gaps = 1/188 (0%)
Query: 1 MRQKGVEPDQHTF-PLLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M + GV+P+ + +LL ++ ++ + K D A +LIS ++ G
Sbjct: 253 MLETGVKPNALSLTSVLLGCSDLSALQTGKQVHQLVCKSPLSRDTTAVTSLISMYSKCGD 312
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ + +F + KD++ W A+I+GY ++ +AL F +M+ + D +T V+VL A
Sbjct: 313 LKDSWDLFVQIPRKDVVTWNAMISGYAQHGAGEKALHLFDEMKKSEIKPDWITFVAVLLA 372
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
AG + G V+ ++ + ++D+ + G +A + MP+
Sbjct: 373 CNHAGMVDLGTKYFNSMVKEFGIKTRPEHYGCMVDLLGRAGRLSEAVDMVKSMPFKPHPA 432
Query: 180 VCWSVLVA 187
+ ++L A
Sbjct: 433 IFGTLLGA 440
>Medtr2g087200.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:36649387-36650467 | 20130731
Length = 316
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 122/245 (49%), Gaps = 3/245 (1%)
Query: 15 LLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKD 74
LL K FS + +I+A+ +LG D F L+S +A+ + A +F ++ K
Sbjct: 14 LLNKCFSSKNINSLKIIHARTIRLGISHDDFIRTKLVSCYASCSKLHQANILFSFTNRKP 73
Query: 75 IIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHG 134
+ +LI Y+ +L E L F +MR + D T+ VL++ A GK VHG
Sbjct: 74 TFLYNSLIRAYLSLNLFKETLSLFREMRLSYKPFDCHTLPLVLKSCAGLSALRLGKQVHG 133
Query: 135 FYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNK 194
+ G LD +AL++MY KCG + A KVFD M R+ V WS ++A + +
Sbjct: 134 AVLVNG-FALDLKNSNALINMYAKCGELEFARKVFDGM--CERNEVTWSTMMADFGMHGR 190
Query: 195 FQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGT 254
F++ +F M+ + + T VL+AC+H G +++G+ + + ++ + V T
Sbjct: 191 FEEVFEMFNRMVEVGERMDSVSFTVVLTACSHGGFVEKGREIFEIMKVRFGVKPDVRHYT 250
Query: 255 ALVDM 259
+VDM
Sbjct: 251 CMVDM 255
>Medtr1g067280.1 | PPR containing plant-like protein | HC |
chr1:28986458-28983697 | 20130731
Length = 684
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 113/225 (50%), Gaps = 23/225 (10%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
++A+ F D F LI+ +A S I +A VFD+ K+ +W ++I Y L
Sbjct: 71 LHARFFPFAITPDNFIATKLITFYAKSNLIRNARNVFDKIPHKNSFSWNSMIIAYTSKSL 130
Query: 91 PSEALKCFVK-MRSTGTGV--DALTVVSVLRAAAMAGDDNF--GKWVH------GFYVQA 139
++AL F + ST V D T+ S+L+ A++ + K +H GFY
Sbjct: 131 FNDALSLFASFVSSTDNNVSPDNFTMTSILKTLALSSSVCYKSAKQIHCSALLRGFYS-- 188
Query: 140 GRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAI 199
D V +AL+ Y +CG + A KVFDEM + RD+V W+ ++ GY Q +++
Sbjct: 189 -----DVCVLNALVTCYCRCGRIEIARKVFDEM--TERDIVTWNAMIGGYSQSGFYEECK 241
Query: 200 RVFWNML---SDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIE 241
R++ ML ++PN T+ SV+ AC S L G VH++++
Sbjct: 242 RLYLEMLGLEGKGILPNAVTIGSVMQACGQSKDLSFGMEVHRFMK 286
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 137/290 (47%), Gaps = 39/290 (13%)
Query: 6 VEPDQHTFPLLLKMF---SKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGS 62
V PD T +LK S + I+ GF D NAL++ + G I
Sbjct: 149 VSPDNFTMTSILKTLALSSSVCYKSAKQIHCSALLRGFYSDVCVLNALVTCYCRCGRIEI 208
Query: 63 ACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRS-TGTGV--DALTVVSVLRA 119
A +VFDE + +DI+ W A+I GY ++ E + +++M G G+ +A+T+ SV++A
Sbjct: 209 ARKVFDEMTERDIVTWNAMIGGYSQSGFYEECKRLYLEMLGLEGKGILPNAVTIGSVMQA 268
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEM----PYS 175
+ D +FG VH F G ++ D ++ +A++ MY KCG + A ++FDEM S
Sbjct: 269 CGQSKDLSFGMEVHRFMKDDG-IETDVFLCNAIIAMYAKCGSLNYARELFDEMGEKDEVS 327
Query: 176 YRDVV-------------------------CWSVLVAGYVQCNKFQDAIRVFWNM--LSD 208
YR ++ W+ ++ G VQ N+F+ A+ + M
Sbjct: 328 YRSIISGYMINGFVDEALDVLKGIENPGLSTWNDVIPGMVQNNQFERALDLVREMPGFGL 387
Query: 209 NVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVD 258
N+ PN TL+S++ ++ L K VH Y + N + + TA+VD
Sbjct: 388 NLKPNVVTLSSIIPLFSYFSNLRGLKEVHGYAIRRSYDQN-IYVATAIVD 436
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 105/227 (46%), Gaps = 36/227 (15%)
Query: 39 GFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCF 98
G + D F NA+I+ +A G + A ++FDE KD +++ ++I+GY+ N EAL
Sbjct: 289 GIETDVFLCNAIIAMYAKCGSLNYARELFDEMGEKDEVSYRSIISGYMINGFVDEALDVL 348
Query: 99 VKMRSTGTGV---------------------------------DALTVVSVLRAAAMAGD 125
+ + G + +T+ S++ + +
Sbjct: 349 KGIENPGLSTWNDVIPGMVQNNQFERALDLVREMPGFGLNLKPNVVTLSSIIPLFSYFSN 408
Query: 126 DNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVL 185
K VHG+ ++ Q + YV +A++D Y K G A +VFD+ R ++ W+ +
Sbjct: 409 LRGLKEVHGYAIRRSYDQ-NIYVATAIVDSYAKLGFIHLARRVFDQS--QSRSLIIWTSI 465
Query: 186 VAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQ 232
+ Y A+ ++ ML + P+ TLTSVL+ACAHSG +++
Sbjct: 466 IYAYASHGDASLALGLYNQMLDRGIQPDPVTLTSVLTACAHSGLVNE 512
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 74/158 (46%), Gaps = 1/158 (0%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
++ + +D + + A++ ++A GFI A +VFD+S + +I WT++I Y +
Sbjct: 415 VHGYAIRRSYDQNIYVATAIVDSYAKLGFIHLARRVFDQSQSRSLIIWTSIIYAYASHGD 474
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
S AL + +M G D +T+ SVL A A +G N V +Q ++
Sbjct: 475 ASLALGLYNQMLDRGIQPDPVTLTSVLTACAHSGLVNEAWDVFNAMPSKHGIQPVVEHYA 534
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAG 188
++ + + G +A K +MP+ V W L+ G
Sbjct: 535 CMVGVLSRAGKLSEAEKFISKMPFEPTAKV-WGALLNG 571
>Medtr1g040535.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:15006779-15004629 | 20130731
Length = 675
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 128/249 (51%), Gaps = 19/249 (7%)
Query: 25 VEDPFMIYAQI-FKLGFDLDRFAGNALISAFANSGFIGSACQVF----DESSVKDIIAWT 79
+ED +Y ++ FK D NA+++ ++ +G A +F +E D++ W+
Sbjct: 1 MEDASKVYERMRFK-----DVVTWNAMVTGYSQNGRFEDALSLFGKMREEIIELDVVTWS 55
Query: 80 ALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQ- 138
++I+GY + EA+ F KM + + ++S+L A A G GK H + V+
Sbjct: 56 SVISGYAQRGFGCEAMDVFRKMCGCRCRPNVVKLMSLLSACASVGALLHGKETHCYSVKF 115
Query: 139 --AGRVQLDG---YVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCN 193
G D V +AL+DMY KC + A +FDE+ RDVV W+V++ GY Q
Sbjct: 116 ILKGEHNDDNDDLAVINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQYG 175
Query: 194 KFQDAIRVFWNMLS-DN-VVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVE 251
A+++F M DN +VPN+FT++ VL +CA AL GK +H Y+ + + + V
Sbjct: 176 DANHALQLFSEMFKFDNCIVPNDFTISCVLMSCARLSALIFGKHIHAYVLRRSLIYSDVL 235
Query: 252 -LGTALVDM 259
+ L+DM
Sbjct: 236 FVANCLIDM 244
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 115/251 (45%), Gaps = 41/251 (16%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKD--IIAWTALINGYVKNDLPSEALKCFVKMRSTG 105
NALI +A + A +FDE KD ++ WT +I GY + + AL+ F +M
Sbjct: 132 NALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQYGDANHALQLFSEMFKFD 191
Query: 106 TGV--DALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDG-YVWSALMDMYFKCGHC 162
+ + T+ VL + A FGK +H + ++ + D +V + L+DMY K G
Sbjct: 192 NCIVPNDFTISCVLMSCARLSALIFGKHIHAYVLRRSLIYSDVLFVANCLIDMYSKSGDV 251
Query: 163 DDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVF---------------WNM-- 205
D A VFD M S R+ + W+ L+ GY +DA RVF WN
Sbjct: 252 DTAQVVFDSM--SKRNAISWTSLLTGYGMHGCSEDAFRVFDEMRKEALSFGNGGSWNRFV 309
Query: 206 ----------------LSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNS 249
+ + +VPN+FT++ VL +CA AL GK +H ++ + S +
Sbjct: 310 XGDANHALQLFSEMFKIDNCIVPNDFTISCVLMSCARLSALKFGKQIHAHVLRRSHSNSD 369
Query: 250 VE-LGTALVDM 259
V + L+DM
Sbjct: 370 VLFVANCLIDM 380
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 96/216 (44%), Gaps = 36/216 (16%)
Query: 45 FAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMR-- 102
F N LI ++ SG + +A VFD S ++ I+WT+L+ GY + +A + F +MR
Sbjct: 236 FVANCLIDMYSKSGDVDTAQVVFDSMSKRNAISWTSLLTGYGMHGCSEDAFRVFDEMRKE 295
Query: 103 --STGTG-----------------------------VDALTVVSVLRAAAMAGDDNFGKW 131
S G G + T+ VL + A FGK
Sbjct: 296 ALSFGNGGSWNRFVXGDANHALQLFSEMFKIDNCIVPNDFTISCVLMSCARLSALKFGKQ 355
Query: 132 VHGFYVQAGRVQLDG-YVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYV 190
+H ++ D +V + L+DMY K G D A VFD M S R+ V W+ L+ GY
Sbjct: 356 IHAHVLRRSHSNSDVLFVANCLIDMYSKSGDVDTAQVVFDSM--SKRNAVSWTSLLTGYG 413
Query: 191 QCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAH 226
+ +DA RVF M + +V + T VL AC H
Sbjct: 414 MHGRSEDAFRVFDEMRKEALVLDGITFLVVLYACKH 449
>Medtr5g013950.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:4606693-4603955 | 20130731
Length = 735
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 104/194 (53%), Gaps = 5/194 (2%)
Query: 43 DRFAGNALISAFANSGFIGSACQVFDE--SSVKDIIAWTALINGYVKNDLPSEALKCFVK 100
++ A +IS + ++G + A +FD+ S KD IAWT +I GYV+N+L +EA+ F +
Sbjct: 394 NKIAWTCMISGYLSAGQVLKASNLFDDMPDSDKDSIAWTLMIYGYVQNELIAEAINLFAE 453
Query: 101 MRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQA-GRVQLDGYVWSALMDMYFKC 159
M + G T + A + G +H ++ + D Y+ ++L+ MY KC
Sbjct: 454 MMAQGASPINSTYAVLFGAVGSVAYLDLGWQLHAMQLKTIYEYEYDVYLENSLISMYAKC 513
Query: 160 GHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTS 219
G +DA ++F M + RD + W+ ++ G + +A+ ++ ML V P+ T
Sbjct: 514 GEIEDAYRIFSNM--NCRDKISWNSMIMGLSDHGRANEALNMYETMLEFGVYPDAVTFLG 571
Query: 220 VLSACAHSGALDQG 233
VL+ACAH+G +D+G
Sbjct: 572 VLTACAHAGFVDKG 585
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 115/238 (48%), Gaps = 29/238 (12%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTG 107
NA++SA+ SG A + FD+ +++++WTA+++GY +A K F +M
Sbjct: 107 NAMLSAYLQSGMTRQAKRFFDDMPERNVVSWTAMLSGYAGLGWIDDARKVFDEMPERNVV 166
Query: 108 VDALTVVSVLRAAAM---------AGDDNFGKW---VHGFYVQAGRVQ-----------L 144
VV ++R + D N W + G YV+ GR+
Sbjct: 167 SWNSMVVGLIRNGDLEEARKVFDDTPDKNVVSWNAMIEG-YVENGRMDDAKDLFDQIECR 225
Query: 145 DGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWN 204
+ W++++ Y + G ++A ++F MP ++VV W+ ++ G+ +++A+ +F +
Sbjct: 226 NVITWTSMISGYCRVGDVNEAFRLFQIMP--EKNVVSWTAMIGGFAWNGFYREALLLFLD 283
Query: 205 MLS-DNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVE--LGTALVDM 259
M++ + PNE T S++ ACA G GK +H + + L+ + LG +LV M
Sbjct: 284 MMTLSDAKPNEETFVSLVYACAGMGFPCLGKQLHAQMILNRWKLDDYDCRLGRSLVRM 341
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 88/197 (44%), Gaps = 46/197 (23%)
Query: 49 ALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGV 108
++++ +A G++ A +FD ++I+ + A+++ Y+++ + +A + F M
Sbjct: 77 SMLTNYAKHGYVEQARNLFDIMPHRNIVTYNAMLSAYLQSGMTRQAKRFFDDMPER---- 132
Query: 109 DALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKV 168
VVS W+A++ Y G DDA KV
Sbjct: 133 ---NVVS---------------------------------WTAMLSGYAGLGWIDDARKV 156
Query: 169 FDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSG 228
FDEMP R+VV W+ +V G ++ ++A +VF + NVV + +++ +G
Sbjct: 157 FDEMP--ERNVVSWNSMVVGLIRNGDLEEARKVFDDTPDKNVV----SWNAMIEGYVENG 210
Query: 229 ALDQGKLVHQYIECKKV 245
+D K + IEC+ V
Sbjct: 211 RMDDAKDLFDQIECRNV 227
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 89/192 (46%), Gaps = 15/192 (7%)
Query: 49 ALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRS-TGTG 107
++IS + G + A ++F K++++WTA+I G+ N EAL F+ M + +
Sbjct: 232 SMISGYCRVGDVNEAFRLFQIMPEKNVVSWTAMIGGFAWNGFYREALLLFLDMMTLSDAK 291
Query: 108 VDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGY---VWSALMDMYFKCGHCDD 164
+ T VS++ A A G GK +H + R +LD Y + +L+ MY CG D
Sbjct: 292 PNEETFVSLVYACAGMGFPCLGKQLHAQMI-LNRWKLDDYDCRLGRSLVRMYSVCGLMDS 350
Query: 165 ACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSAC 224
A VF E D ++ ++ GYVQ + A +F + VP + C
Sbjct: 351 ARSVF-EGDMKNCDDQSFNSMINGYVQAGQLHKAQELF------DTVP---IRNKIAWTC 400
Query: 225 AHSGALDQGKLV 236
SG L G+++
Sbjct: 401 MISGYLSAGQVL 412
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 57/124 (45%), Gaps = 12/124 (9%)
Query: 125 DDNFGKWVHGFYVQAGRVQ-----------LDGYVWSALMDMYFKCGHCDDACKVFDEMP 173
D +F ++G YVQAG++ + W+ ++ Y G A +FD+MP
Sbjct: 364 DQSFNSMING-YVQAGQLHKAQELFDTVPIRNKIAWTCMISGYLSAGQVLKASNLFDDMP 422
Query: 174 YSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
S +D + W++++ GYVQ +AI +F M++ P T + A LD G
Sbjct: 423 DSDKDSIAWTLMIYGYVQNELIAEAINLFAEMMAQGASPINSTYAVLFGAVGSVAYLDLG 482
Query: 234 KLVH 237
+H
Sbjct: 483 WQLH 486
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 88/195 (45%), Gaps = 14/195 (7%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVED-PFMIYAQIFKL--GFDLDRFAGNALISAFANS 57
M +G P T+ +L D + ++A K ++ D + N+LIS +A
Sbjct: 454 MMAQGASPINSTYAVLFGAVGSVAYLDLGWQLHAMQLKTIYEYEYDVYLENSLISMYAKC 513
Query: 58 GFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVL 117
G I A ++F + +D I+W ++I G + +EAL + M G DA+T + VL
Sbjct: 514 GEIEDAYRIFSNMNCRDKISWNSMIMGLSDHGRANEALNMYETMLEFGVYPDAVTFLGVL 573
Query: 118 RAAAMAGD-----DNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEM 172
A A AG + F ++ + +Q G L+ YV +++++ + G DA + +
Sbjct: 574 TACAHAGFVDKGCELFSVMLNDYALQPG---LEHYV--SIINILGRAGRVKDAEEFVLRL 628
Query: 173 PYSYRDVVCWSVLVA 187
P + W L+
Sbjct: 629 PVEPNHTI-WGALIG 642
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 65/123 (52%), Gaps = 9/123 (7%)
Query: 132 VHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQ 191
+H F +G + W++++ Y K G+ + A +FD MP +R++V ++ +++ Y+Q
Sbjct: 60 LHSF--PSGNIHSRVVHWTSMLTNYAKHGYVEQARNLFDIMP--HRNIVTYNAMLSAYLQ 115
Query: 192 CNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG-KLVHQYIECKKVSLNSV 250
+ A R F +M NVV + T++LS A G +D K+ + E VS NS+
Sbjct: 116 SGMTRQAKRFFDDMPERNVV----SWTAMLSGYAGLGWIDDARKVFDEMPERNVVSWNSM 171
Query: 251 ELG 253
+G
Sbjct: 172 VVG 174
>Medtr5g027980.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:11695650-11697815 | 20130731
Length = 446
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 109/197 (55%), Gaps = 4/197 (2%)
Query: 38 LGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKC 97
+G + D N+LI+ + G I +AC VF+ K + +W+A+I + ++ +E L
Sbjct: 1 MGLEGDVIVQNSLINMYGKCGEIKNACDVFNGMDEKSVASWSAIIGAHACVEMWNECLML 60
Query: 98 FVKMRSTGT-GVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMY 156
KM S G V+ T+V+VL A G + GK +HG ++ +L+ V ++L+DMY
Sbjct: 61 LGKMSSEGRCRVEESTLVNVLSACTHLGSPDLGKCIHGILLR-NISELNVVVKTSLIDMY 119
Query: 157 FKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFT 216
K G + +VF M S ++ ++V+++G + ++A++VF M+ + + P++
Sbjct: 120 VKSGCLEKGLRVFKNM--SEKNRYSYTVMISGLAIHGRGKEALKVFSEMIEEGLAPDDVV 177
Query: 217 LTSVLSACAHSGALDQG 233
V SAC+H+G +++G
Sbjct: 178 YVGVFSACSHAGLVEEG 194
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 63/116 (54%), Gaps = 4/116 (3%)
Query: 145 DGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWN 204
D V ++L++MY KCG +AC VF+ M + V WS ++ + + + + +
Sbjct: 6 DVIVQNSLINMYGKCGEIKNACDVFNGM--DEKSVASWSAIIGAHACVEMWNECLMLLGK 63
Query: 205 MLSDNVVP-NEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
M S+ E TL +VLSAC H G+ D GK +H I + +S +V + T+L+DM
Sbjct: 64 MSSEGRCRVEESTLVNVLSACTHLGSPDLGKCIHG-ILLRNISELNVVVKTSLIDM 118
>Medtr1g073300.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:32525227-32527614 | 20130731
Length = 795
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 99/192 (51%), Gaps = 3/192 (1%)
Query: 43 DRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMR 102
D + NA++S + N+ I A +F E ++++ WT +I+G +N E LK F +M+
Sbjct: 356 DIISWNAVLSGYVNAQRIEEANSIFSEMPERNVLTWTVMISGLAQNGFGEEGLKLFNQMK 415
Query: 103 STGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHC 162
S G + A ++ G + G+ +H ++ G +AL+ MY +CG
Sbjct: 416 SEGLEPCDYAFAGAITACSVLGSLDNGQQIHSQVIRLGH-DSGLSAGNALITMYSRCGVV 474
Query: 163 DDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLS 222
+ A VF MPY D V W+ ++A Q AI +F M+ ++++P+ T ++L+
Sbjct: 475 ESAESVFLTMPYV--DSVSWNAMIAALAQHGHGVKAIELFEQMMKEDILPDRITFLTILT 532
Query: 223 ACAHSGALDQGK 234
AC H+G + +G+
Sbjct: 533 ACNHAGLIKEGR 544
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 141/342 (41%), Gaps = 87/342 (25%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPF--MIYAQIFKLGFDLDRFAGNALISAFA--- 55
M++ G PD TF +L S E+ M++ ++ KLG L NAL+S +
Sbjct: 130 MKRYGFLPDPFTFSSVLSALSLIADEERHCQMLHCEVIKLGTLLIPSVTNALLSCYVCCA 189
Query: 56 ------NSGFIGSACQVFDESSVKDI---------------------------------I 76
+S + SA +VFDE+ I +
Sbjct: 190 SSPLVKSSQLMASARKVFDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYPIDV 249
Query: 77 AWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDD----NFGKWV 132
AW A+I+GYV+ L EA F +M S G D T S++ A + N G+ V
Sbjct: 250 AWNAMISGYVRRGLYEEAFDTFRRMHSMGIQEDEYTYTSLISACGSCNEKMGMFNCGRQV 309
Query: 133 HG-----------------------FY------VQAGRV-----QLDGYVWSALMDMYFK 158
HG FY ++A RV D W+A++ Y
Sbjct: 310 HGYILRTVVEPSHHFVLSVNNALITFYTKYDRMIEARRVFDKMPVRDIISWNAVLSGYVN 369
Query: 159 CGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLT 218
++A +F EMP R+V+ W+V+++G Q ++ +++F M S+ + P ++
Sbjct: 370 AQRIEEANSIFSEMP--ERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFA 427
Query: 219 SVLSACAHSGALDQGKLVH-QYIECKKVSLNSVELGTALVDM 259
++AC+ G+LD G+ +H Q I S + G AL+ M
Sbjct: 428 GAITACSVLGSLDNGQQIHSQVIRLGHDS--GLSAGNALITM 467
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 109/245 (44%), Gaps = 48/245 (19%)
Query: 43 DRFAGNALISAFANSGFIGSACQVFDES--SVKDIIAWTALINGYVKNDLPSEALKCFVK 100
D A L+SA+++SG + A Q+F+ + +++D +++ A+I Y + AL FV+
Sbjct: 70 DIVARTTLLSAYSSSGNVKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNLFVQ 129
Query: 101 MRSTGTGVDALTVVSVLRAAAMAGD-DNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKC 159
M+ G D T SVL A ++ D + + +H ++ G + + V +AL+ Y C
Sbjct: 130 MKRYGFLPDPFTFSSVLSALSLIADEERHCQMLHCEVIKLGTLLIPS-VTNALLSCYVCC 188
Query: 160 GHCD---------DACKVFDEMP-------------------------------YSYRDV 179
A KVFDE P +Y
Sbjct: 189 ASSPLVKSSQLMASARKVFDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYPID 248
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACA----HSGALDQGKL 235
V W+ +++GYV+ +++A F M S + +E+T TS++SAC G + G+
Sbjct: 249 VAWNAMISGYVRRGLYEEAFDTFRRMHSMGIQEDEYTYTSLISACGSCNEKMGMFNCGRQ 308
Query: 236 VHQYI 240
VH YI
Sbjct: 309 VHGYI 313
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 90/193 (46%), Gaps = 10/193 (5%)
Query: 1 MRQKGVEPDQHTFPLLLKMFS-KPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M+ +G+EP + F + S +++ I++Q+ +LG D AGNALI+ ++ G
Sbjct: 414 MKSEGLEPCDYAFAGAITACSVLGSLDNGQQIHSQVIRLGHDSGLSAGNALITMYSRCGV 473
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ SA VF D ++W A+I ++ +A++ F +M D +T +++L A
Sbjct: 474 VESAESVFLTMPYVDSVSWNAMIAALAQHGHGVKAIELFEQMMKEDILPDRITFLTILTA 533
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQL----DGYVWSALMDMYFKCGHCDDACKVFDEMPYS 175
AG G+ H F R + D Y + L+D+ + G A V MP+
Sbjct: 534 CNHAGLIKEGR--HYFDTMCTRYGITPGEDHY--ARLIDLLCRAGMFLKAQSVIKSMPFE 589
Query: 176 YRDVVCWSVLVAG 188
+ W L+AG
Sbjct: 590 AGAPI-WEALLAG 601
>Medtr3g101700.1 | PPR containing plant-like protein | HC |
chr3:46826943-46824374 | 20130731
Length = 729
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 112/232 (48%), Gaps = 12/232 (5%)
Query: 3 QKGVEPDQHTFPLLLKMF-SKP--------VVEDPFMIYAQIFKLGFDLDRFAGNALISA 53
Q V P++ TF LL+K + S P I Q K G + +LI
Sbjct: 41 QANVNPNEFTFSLLIKAYLSSPSFTHCPSTAALQARQIQTQCLKRGVNQFIHVHTSLIDL 100
Query: 54 FANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTV 113
+ GF A +FD+ S +D+++W LI GY +N A++ FV M + T+
Sbjct: 101 YMKLGFTSHARNMFDQMSYRDVVSWNVLICGYSQNGYLYHAIQLFVDMLRENFKPNQTTI 160
Query: 114 VSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMP 173
VS+L + G+ +HGF ++AG LD ++ +ALM MY KC + + +FDEM
Sbjct: 161 VSLLPSCGCFELIFQGRSIHGFGIKAG-FGLDSHLNNALMSMYAKCDDLEASQLLFDEM- 218
Query: 174 YSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACA 225
+ VV W+ ++ Y Q F AI F ML + P+ T+ +++SA A
Sbjct: 219 -DEKSVVSWNTMIGVYGQNGLFDKAILYFKEMLKEGFHPSSVTIMNLVSANA 269
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 113/232 (48%), Gaps = 4/232 (1%)
Query: 28 PFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVK 87
P ++ + K GF D +L+ +A GF +A Q++ KD+I TA+I+ Y +
Sbjct: 271 PENVHCYVVKCGFTNDASVVTSLVCLYAKQGFTNTAKQLYKYYPTKDLITLTAIISSYSE 330
Query: 88 NDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGY 147
A++CF++ DA+ ++ VL G HG+ V++G + D
Sbjct: 331 KGDIESAVECFIQTIQLDIKPDAVALIGVLHGITNPSHFAIGCTFHGYGVKSG-LSNDCL 389
Query: 148 VWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLS 207
V + L+ +Y + + A +F +M + ++ W+ +++G VQ K DA+ +F M
Sbjct: 390 VANGLISLYSRFDEIEAALSLFYDM--REKPLITWNSMISGCVQAGKSSDAMELFSEMSM 447
Query: 208 DNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
P+ T+ S+LS C G L G+ +H YI V + +GTAL+DM
Sbjct: 448 CGKKPDAITIASLLSGCCQLGNLRIGETLHSYILRNNVRVEDF-IGTALIDM 498
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 101/199 (50%), Gaps = 7/199 (3%)
Query: 37 KLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALK 96
K G D N LIS ++ I +A +F + K +I W ++I+G V+ S+A++
Sbjct: 381 KSGLSNDCLVANGLISLYSRFDEIEAALSLFYDMREKPLITWNSMISGCVQAGKSSDAME 440
Query: 97 CFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMY 156
F +M G DA+T+ S+L G+ G+ +H Y+ V+++ ++ +AL+DMY
Sbjct: 441 LFSEMSMCGKKPDAITIASLLSGCCQLGNLRIGETLHS-YILRNNVRVEDFIGTALIDMY 499
Query: 157 FKCGHCDDACKVFDEMPYSYRD--VVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNE 214
KCG D A KVF Y+ +D + W+ +++GY A + + + P++
Sbjct: 500 SKCGRLDYAEKVF----YNIKDPCLATWNAIISGYSLYGLEHTAFGCYSKLQEQGLKPDK 555
Query: 215 FTLTSVLSACAHSGALDQG 233
T VL+AC H G + G
Sbjct: 556 ITFLGVLAACTHGGLVYLG 574
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
Query: 147 YVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNML 206
+V ++L+D+Y K G A +FD+M SYRDVV W+VL+ GY Q AI++F +ML
Sbjct: 92 HVHTSLIDLYMKLGFTSHARNMFDQM--SYRDVVSWNVLICGYSQNGYLYHAIQLFVDML 149
Query: 207 SDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
+N PN+ T+ S+L +C + QG+ +H + L+S L AL+ M
Sbjct: 150 RENFKPNQTTIVSLLPSCGCFELIFQGRSIHGFGIKAGFGLDS-HLNNALMSM 201
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 112/242 (46%), Gaps = 14/242 (5%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPFM---IYAQIFKLGFDLDRFAGNALISAFANS 57
M ++ +P+Q T LL S E F I+ K GF LD NAL+S +A
Sbjct: 148 MLRENFKPNQTTIVSLLP--SCGCFELIFQGRSIHGFGIKAGFGLDSHLNNALMSMYAKC 205
Query: 58 GFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVL 117
+ ++ +FDE K +++W +I Y +N L +A+ F +M G ++T+++++
Sbjct: 206 DDLEASQLLFDEMDEKSVVSWNTMIGVYGQNGLFDKAILYFKEMLKEGFHPSSVTIMNLV 265
Query: 118 RAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYR 177
A A F + VH + V+ G D V ++L+ +Y K G + A +++ P +
Sbjct: 266 SANA------FPENVHCYVVKCGFTN-DASVVTSLVCLYAKQGFTNTAKQLYKYYP--TK 316
Query: 178 DVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVH 237
D++ + +++ Y + + A+ F + ++ P+ L VL + G H
Sbjct: 317 DLITLTAIISSYSEKGDIESAVECFIQTIQLDIKPDAVALIGVLHGITNPSHFAIGCTFH 376
Query: 238 QY 239
Y
Sbjct: 377 GY 378
>Medtr7g103230.1 | PPR containing plant-like protein | HC |
chr7:41735375-41738881 | 20130731
Length = 970
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 119/213 (55%), Gaps = 8/213 (3%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGT- 106
ALIS + N A ++F S +I++++ALI+ + K++ ++L F+ M + +
Sbjct: 102 TALISTYINLRLFSYAHRLFLSQSPPNIVSYSALISAFSKSNREKQSLFLFLHMITVSSL 161
Query: 107 GVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDAC 166
+ T V+VL A + FG +H ++ G ++ +V +ALM Y KCG +A
Sbjct: 162 RPNHYTYVAVLTACTRILNLQFGLQLHAAVIKTGYLK-SVFVSNALMLFYSKCGFYKNAF 220
Query: 167 KVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLS-DNVVPNEFTLTSVLSACA 225
KVFDEMP RD+ W+ +++ VQ + D R+F +ML D + + FTL++ L+ACA
Sbjct: 221 KVFDEMPE--RDIASWNTVMSCAVQEFMYDDVFRLFCDMLVIDGLKVDYFTLSTFLTACA 278
Query: 226 HSGALDQGKLVHQYIECKKVSL-NSVELGTALV 257
SG L +GK VH + KV L + + +G AL+
Sbjct: 279 ASGLLMEGKQVHAH--AVKVGLEDELNVGNALI 309
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 129/264 (48%), Gaps = 42/264 (15%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVK--- 87
++A K+G + + GNALI + N G I +F+ SV+D+I WT ++ Y++
Sbjct: 289 VHAHAVKVGLEDELNVGNALIGFYTNFGDIDDVVCLFERMSVRDVITWTEMVRVYMEFGF 348
Query: 88 --------NDLPS--------------------EALKCFVKMRSTGTGVDALTVVSVLRA 119
+++P +A++ F++M G + ++ S + A
Sbjct: 349 VDLGLKIFDEMPEKNCVTYNVLLSGLCRNAEGLKAVELFIRMVEEGVELTDFSLSSGINA 408
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
++ D + +HGF ++ G + +V AL+DMY +CG DA K+++E+
Sbjct: 409 CSLLADYRVSRQMHGFAIKFG-FGSNVFVEGALLDMYTRCGRMVDAEKMWEEL--EEVSS 465
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSD-NVVPNEFTLTSVLSACAHSGALDQGKLVHQ 238
V W+ ++ GY + + ++A +F S+ ++ +E LTS+LS C G D GK +H
Sbjct: 466 VVWTSMMCGYARNGQPREAFSLFHLGHSEWKLIMDEVALTSMLSLCGTVGYHDMGKQIH- 524
Query: 239 YIECKKVSL---NSVELGTALVDM 259
C+ + ++V++G +V+M
Sbjct: 525 ---CQVLKFGFHSNVQVGNVVVEM 545
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 97/196 (49%), Gaps = 20/196 (10%)
Query: 37 KLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALK 96
K GF + F AL+ + G + A ++++E + WT+++ GY +N P EA
Sbjct: 427 KFGFGSNVFVEGALLDMYTRCGRMVDAEKMWEELEEVSSVVWTSMMCGYARNGQPREAFS 486
Query: 97 CFVKMRSTGTGV-DALTVVSVLRAAAMAGDDNFGKWVH------GFY--VQAGRVQLDGY 147
F S + D + + S+L G + GK +H GF+ VQ G V
Sbjct: 487 LFHLGHSEWKLIMDEVALTSMLSLCGTVGYHDMGKQIHCQVLKFGFHSNVQVGNV----- 541
Query: 148 VWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLS 207
+++MYFKCG+ DDA K+F M + D+V W+ L++GY+ + A+ ++ M
Sbjct: 542 ----VVEMYFKCGNVDDAIKMFSGMAST--DIVSWNTLISGYLTHRQGDRALEIWLKMQE 595
Query: 208 DNVVPNEFTLTSVLSA 223
+ + P++ T ++SA
Sbjct: 596 EGIKPDDITFVLIISA 611
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 119/253 (47%), Gaps = 34/253 (13%)
Query: 5 GVEPDQHTFPLLLKMFSKPV-VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSA 63
+ P+ +T+ +L ++ + ++ ++A + K G+ F NAL+ ++ GF +A
Sbjct: 160 SLRPNHYTYVAVLTACTRILNLQFGLQLHAAVIKTGYLKSVFVSNALMLFYSKCGFYKNA 219
Query: 64 CQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRST-GTGVDALTVVSVLRAAAM 122
+VFDE +DI +W +++ V+ + + + F M G VD T+ + L A A
Sbjct: 220 FKVFDEMPERDIASWNTVMSCAVQEFMYDDVFRLFCDMLVIDGLKVDYFTLSTFLTACAA 279
Query: 123 AGDDNFGKWVH-------------------GFYVQAGRVQ-----------LDGYVWSAL 152
+G GK VH GFY G + D W+ +
Sbjct: 280 SGLLMEGKQVHAHAVKVGLEDELNVGNALIGFYTNFGDIDDVVCLFERMSVRDVITWTEM 339
Query: 153 MDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVP 212
+ +Y + G D K+FDEMP ++ V ++VL++G + + A+ +F M+ + V
Sbjct: 340 VRVYMEFGFVDLGLKIFDEMP--EKNCVTYNVLLSGLCRNAEGLKAVELFIRMVEEGVEL 397
Query: 213 NEFTLTSVLSACA 225
+F+L+S ++AC+
Sbjct: 398 TDFSLSSGINACS 410
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 48/89 (53%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
I+ Q+ K GF + GN ++ + G + A ++F + DI++W LI+GY+ +
Sbjct: 523 IHCQVLKFGFHSNVQVGNVVVEMYFKCGNVDDAIKMFSGMASTDIVSWNTLISGYLTHRQ 582
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRA 119
AL+ ++KM+ G D +T V ++ A
Sbjct: 583 GDRALEIWLKMQEEGIKPDDITFVLIISA 611
>Medtr3g088820.1 | PPR containing plant-like protein | HC |
chr3:40646143-40648516 | 20130731
Length = 698
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 101/193 (52%), Gaps = 3/193 (1%)
Query: 45 FAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRST 104
F N + A+A + A ++FDE +D +W ALI Y + P EA+ F+ M
Sbjct: 99 FLRNRALEAYAKCSSLHDAQELFDEMPQRDGGSWNALITAYSRLRYPDEAISLFLWMNKD 158
Query: 105 GTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDD 164
G + +T SVL + A + + + VHG V+ G + + SAL+D+Y KCG
Sbjct: 159 GVRANNITFASVLGSCADVYELSLSQQVHGLVVKFG-FSSNVIIGSALVDVYAKCGIMVY 217
Query: 165 ACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSAC 224
A ++F E+P + V W+V+V Y+ ++A+ +F M SD V P FT ++ L AC
Sbjct: 218 ARRMFHEIPRP--NAVTWNVIVRRYLDVGDAKEAVLLFTRMFSDGVKPLNFTFSNALVAC 275
Query: 225 AHSGALDQGKLVH 237
+ AL++G +H
Sbjct: 276 SSMHALEEGMQIH 288
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 137/256 (53%), Gaps = 9/256 (3%)
Query: 5 GVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSA 63
G+ D L+ M+ K +E+ F ++ Q LG D ++S +A SG A
Sbjct: 295 GLHEDTVVSSSLINMYVKCGELENGFRVFHQ---LG-SKDLVCWTCIVSGYAMSGKTWDA 350
Query: 64 CQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMA 123
++FD+ V+++I+W A++ GY + SEAL M T +D +T+ ++ +A
Sbjct: 351 RKLFDQMPVRNVISWNAMLAGYTRFFKWSEALDFVCLMLDTVKDLDHVTLGLMINVSAGL 410
Query: 124 GDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWS 183
D GK +HGF + G + V +A++DMY KCG+ + A +V+ + ++RD V W+
Sbjct: 411 LDHEMGKQLHGFVYRHG-FHSNLMVGNAILDMYGKCGNLNSA-RVWFNLMSNWRDRVSWN 468
Query: 184 VLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECK 243
L+A + + + +F M + P+++T ++L+ACA++ +L GK +H +I
Sbjct: 469 ALLASCGLHHSSEQTLTMFSEMQWE-AKPSKYTFGTLLAACANTYSLHLGKQIHGFIIRH 527
Query: 244 KVSLNSVELGTALVDM 259
+ ++SV + TAL+ M
Sbjct: 528 EFQIDSV-IRTALIYM 542
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 95/201 (47%), Gaps = 3/201 (1%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
++ + K GF + G+AL+ +A G + A ++F E + + W ++ Y+
Sbjct: 186 VHGLVVKFGFSSNVIIGSALVDVYAKCGIMVYARRMFHEIPRPNAVTWNVIVRRYLDVGD 245
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
EA+ F +M S G T + L A + G +HG V+ G + D V S
Sbjct: 246 AKEAVLLFTRMFSDGVKPLNFTFSNALVACSSMHALEEGMQIHGGVVKWG-LHEDTVVSS 304
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV 210
+L++MY KCG ++ +VF ++ +D+VCW+ +V+GY K DA ++F M NV
Sbjct: 305 SLINMYVKCGELENGFRVFHQL--GSKDLVCWTCIVSGYAMSGKTWDARKLFDQMPVRNV 362
Query: 211 VPNEFTLTSVLSACAHSGALD 231
+ L S ALD
Sbjct: 363 ISWNAMLAGYTRFFKWSEALD 383
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 100/204 (49%), Gaps = 5/204 (2%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFD-ESSVKDIIAWTALINGYVKND 89
++ +++ GF + GNA++ + G + SA F+ S+ +D ++W AL+ +
Sbjct: 419 LHGFVYRHGFHSNLMVGNAILDMYGKCGNLNSARVWFNLMSNWRDRVSWNALLASCGLHH 478
Query: 90 LPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVW 149
+ L F +M+ T ++L A A + GK +HGF ++ Q+D +
Sbjct: 479 SSEQTLTMFSEMQWEAKP-SKYTFGTLLAACANTYSLHLGKQIHGFIIRH-EFQIDSVIR 536
Query: 150 SALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDN 209
+AL+ MY KC + A ++ RDV+ W+ L+ G ++ +DA+ +F M ++
Sbjct: 537 TALIYMYCKCYCLEYAVEILKGA--VSRDVIMWNTLILGCCHNHRGRDALELFGIMEAEG 594
Query: 210 VVPNEFTLTSVLSACAHSGALDQG 233
+ P+ T +L AC G ++ G
Sbjct: 595 IKPDRVTFEGILLACVEEGLVEFG 618
>Medtr1g037590.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:13924435-13921068 | 20130731
Length = 598
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 106/201 (52%), Gaps = 2/201 (0%)
Query: 34 QIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSE 93
++F+ + D + N +++ F +G + A ++F K++I WTA++ GYV++ L E
Sbjct: 209 KLFERMPERDMPSWNTMVTGFIQNGDLNRAEKLFHAMPKKNVITWTAMMTGYVQHGLSEE 268
Query: 94 ALKCFVKMRST-GTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSAL 152
ALK F KM++ G T V+VL A + G+ +H + Q YV SAL
Sbjct: 269 ALKLFNKMQANDGLKPTTGTFVTVLGACSDLAGLPEGQQIHQM-ISKTVFQESTYVVSAL 327
Query: 153 MDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVP 212
++MY KCG A K+FD+ + D++ W+ ++A Y +AI +F M
Sbjct: 328 INMYSKCGDFHVAKKMFDDGLSGHMDLIAWNGMIAAYAHHGYGNEAIILFNKMQELGFQA 387
Query: 213 NEFTLTSVLSACAHSGALDQG 233
N+ T +L+AC+H+G D+G
Sbjct: 388 NDVTYVGLLTACSHAGLFDEG 408
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 109/214 (50%), Gaps = 15/214 (7%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTG 107
N +++A A+ G I A ++F+E +D+++WT ++ G KN +A F
Sbjct: 130 NTVMTALAHCGRIDDAERLFNEMRERDVVSWTTMVAGLSKNGRVDDARDVF--------- 180
Query: 108 VDALTVVSVLRAAAM-AGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDAC 166
D + + +V+ AM AG G++ + + D W+ ++ + + G + A
Sbjct: 181 -DRMPIRNVVSWNAMIAGYAQNGRFDEALKLFERMPERDMPSWNTMVTGFIQNGDLNRAE 239
Query: 167 KVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNM-LSDNVVPNEFTLTSVLSACA 225
K+F MP ++V+ W+ ++ GYVQ ++A+++F M +D + P T +VL AC+
Sbjct: 240 KLFHAMPK--KNVITWTAMMTGYVQHGLSEEALKLFNKMQANDGLKPTTGTFVTVLGACS 297
Query: 226 HSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
L +G+ +HQ I K V S + +AL++M
Sbjct: 298 DLAGLPEGQQIHQMI-SKTVFQESTYVVSALINM 330
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 95/207 (45%), Gaps = 46/207 (22%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTG 107
N IS G I A +VFDE S +D WT +I+GY+K L +EA K F ++ + +
Sbjct: 5 NYFISKLCREGQINEARKVFDEMSERDSCLWTTMISGYIKCGLINEARKLFDRLDAEKSV 64
Query: 108 VDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACK 167
+ VW+A++ Y K ++A +
Sbjct: 65 I---------------------------------------VWTAMVSGYIKINRIEEAER 85
Query: 168 VFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHS 227
+F+EMP R+VV W+ ++ GY + + Q+A+ +F M NVV + +V++A AH
Sbjct: 86 LFNEMP--VRNVVSWNTMIDGYARNGRTQEAMDLFGRMPERNVV----SWNTVMTALAHC 139
Query: 228 GALDQG-KLVHQYIECKKVSLNSVELG 253
G +D +L ++ E VS ++ G
Sbjct: 140 GRIDDAERLFNEMRERDVVSWTTMVAG 166
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 82/158 (51%), Gaps = 13/158 (8%)
Query: 49 ALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGV 108
A++S + I A ++F+E V+++++W +I+GY +N EA+ F +M
Sbjct: 69 AMVSGYIKINRIEEAERLFNEMPVRNVVSWNTMIDGYARNGRTQEAMDLFGRMPER---- 124
Query: 109 DALTVVSVLRAAAMAGD-DNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACK 167
+ ++ +V+ A A G D+ + + + D W+ ++ K G DDA
Sbjct: 125 NVVSWNTVMTALAHCGRIDDAERLFNEMR------ERDVVSWTTMVAGLSKNGRVDDARD 178
Query: 168 VFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNM 205
VFD MP R+VV W+ ++AGY Q +F +A+++F M
Sbjct: 179 VFDRMPI--RNVVSWNAMIAGYAQNGRFDEALKLFERM 214
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 89/189 (47%), Gaps = 8/189 (4%)
Query: 5 GVEPDQHTFPLLLKMFSKPV-VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSA 63
G++P TF +L S + + I+ I K F + +ALI+ ++ G A
Sbjct: 281 GLKPTTGTFVTVLGACSDLAGLPEGQQIHQMISKTVFQESTYVVSALINMYSKCGDFHVA 340
Query: 64 CQVFDE--SSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAA 121
++FD+ S D+IAW +I Y + +EA+ F KM+ G + +T V +L A +
Sbjct: 341 KKMFDDGLSGHMDLIAWNGMIAAYAHHGYGNEAIILFNKMQELGFQANDVTYVGLLTACS 400
Query: 122 MAG--DDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
AG D+ F + + +V+ D Y + L+D+ + G D+A + + + +
Sbjct: 401 HAGLFDEGFKYFDELLKNRYMQVREDHY--TCLIDLCGRAGRLDEALNIIEGLGKEV-SL 457
Query: 180 VCWSVLVAG 188
W L+AG
Sbjct: 458 SVWGALLAG 466
>Medtr4g064770.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:24165948-24164077 | 20130731
Length = 550
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 122/227 (53%), Gaps = 8/227 (3%)
Query: 38 LGFDLDRFAGNALISAFA---NSGFIGSACQVFDESSVK-DIIAWTALINGYVKNDLPSE 93
+G + + NALIS FA + + ++ +E V+ D+++WT++++G+V+N E
Sbjct: 227 MGVNPNVVTWNALISGFAQKCDREMVSEIFRLMNEDRVEPDVVSWTSVLSGFVQNFRNEE 286
Query: 94 ALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALM 153
A F KM G + T+ ++L A A FGK +HG+ + G V+ D YV SAL+
Sbjct: 287 AFDAFKKMLLLGFCPTSATISALLPACATEARVRFGKEIHGYALVIG-VEDDLYVRSALV 345
Query: 154 DMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVP- 212
DMY KCG +A +F +MP ++ V + ++ GY ++AI +F M + V
Sbjct: 346 DMYAKCGFISEARTLFYKMP--EKNTVTMNSMIFGYANHGCCEEAIELFNQMEMEGVPKL 403
Query: 213 NEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
+ T T+ L+AC+H G ++ G+ + + ++ K +E +VD+
Sbjct: 404 DHLTFTAALTACSHVGDIELGQRLFKIMQEKYCIEPRLEHYACMVDL 450
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 89/179 (49%), Gaps = 5/179 (2%)
Query: 50 LISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTG--TG 107
LI+ + G + A ++FD+ +I W ALI + AL+ F +M++
Sbjct: 70 LITLYTTCGQLSIARKLFDKIPQTNIHRWIALIATCARCGFHDHALEVFSEMQTLNDQKS 129
Query: 108 VDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACK 167
+ SVL+A GD +G+ VH ++ ++D +V SAL+ MY KCG DA K
Sbjct: 130 NSVFVIPSVLKACGHVGDRIYGEQVHCLVLKCS-FEIDAFVSSALIVMYSKCGEVRDARK 188
Query: 168 VFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAH 226
VFD M +D+V + +V+GY Q +A+ + NM V PN T +++S A
Sbjct: 189 VFDGM--VVKDLVAMNAVVSGYAQQGLPNEALSLVENMKLMGVNPNVVTWNALISGFAQ 245
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 104/231 (45%), Gaps = 39/231 (16%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
++ + K F++D F +ALI ++ G + A +VFD VKD++A A+++GY + L
Sbjct: 154 VHCLVLKCSFEIDAFVSSALIVMYSKCGEVRDARKVFDGMVVKDLVAMNAVVSGYAQQGL 213
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
P+EAL M+ G + +T W+
Sbjct: 214 PNEALSLVENMKLMGVNPNVVT------------------------------------WN 237
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSY--RDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSD 208
AL+ + + + ++F M DVV W+ +++G+VQ + ++A F ML
Sbjct: 238 ALISGFAQKCDREMVSEIFRLMNEDRVEPDVVSWTSVLSGFVQNFRNEEAFDAFKKMLLL 297
Query: 209 NVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
P T++++L ACA + GK +H Y V + + + +ALVDM
Sbjct: 298 GFCPTSATISALLPACATEARVRFGKEIHGYALVIGVE-DDLYVRSALVDM 347
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 74/159 (46%), Gaps = 2/159 (1%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
I+ +G + D + +AL+ +A GFI A +F + K+ + ++I GY +
Sbjct: 325 IHGYALVIGVEDDLYVRSALVDMYAKCGFISEARTLFYKMPEKNTVTMNSMIFGYANHGC 384
Query: 91 PSEALKCFVKMRSTGT-GVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVW 149
EA++ F +M G +D LT + L A + GD G+ + + ++ +
Sbjct: 385 CEEAIELFNQMEMEGVPKLDHLTFTAALTACSHVGDIELGQRLFKIMQEKYCIEPRLEHY 444
Query: 150 SALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAG 188
+ ++D++ + G ++A + MP D+ W L+A
Sbjct: 445 ACMVDLFGRAGKLEEAYGIIKSMPVK-PDLFVWGALLAA 482
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 55/111 (49%), Gaps = 5/111 (4%)
Query: 129 GKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAG 188
GK +H G V+ + + S L+ +Y CG A K+FD++P + ++ W L+A
Sbjct: 48 GKKLHALLTTNGYVRFN-LIASNLITLYTTCGQLSIARKLFDKIPQT--NIHRWIALIAT 104
Query: 189 YVQCNKFQDAIRVFWNM--LSDNVVPNEFTLTSVLSACAHSGALDQGKLVH 237
+C A+ VF M L+D + F + SVL AC H G G+ VH
Sbjct: 105 CARCGFHDHALEVFSEMQTLNDQKSNSVFVIPSVLKACGHVGDRIYGEQVH 155
>Medtr2g028240.1 | PPR containing plant-like protein | HC |
chr2:10416867-10418417 | 20130731
Length = 516
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 118/238 (49%), Gaps = 13/238 (5%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFI 60
+R+ ++ D HTF LL+ + + +++Q+ K G D AL+ ++ G +
Sbjct: 53 LRRIRIDLDSHTFTPLLRPSPTSLGKQ---LHSQMIKTGSDSGTVPKTALLDMYSRHGSL 109
Query: 61 GSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAA 120
S+ +VFDE +D++AW L++ +++ P EA++ +M + T+ SVL+
Sbjct: 110 NSSLKVFDEMLHRDVVAWNTLLSCFLRCGKPDEAIRVLREMGRENVEMSEFTLCSVLKCC 169
Query: 121 AMAGDDNFGKWVHGFYVQAGRVQLDGYVWS-ALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
A FG+ VHG V GR D V S AL+D Y G A VF + ++D
Sbjct: 170 ASLKALEFGRQVHGLVVAMGR---DLVVLSTALIDFYSSVGCVHHALNVFYGLK-GWKDD 225
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVH 237
+ + LV+G ++ ++++A +V V PN LTSVL C+ L GK VH
Sbjct: 226 MIHNSLVSGCIKNGRYREAFKVM-----SLVKPNAVALTSVLVCCSEESDLLTGKQVH 278
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 119/238 (50%), Gaps = 13/238 (5%)
Query: 1 MRQKGVEPDQHTFPLLLKM-FSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M ++ VE + T +LK S +E ++ + +G DL + ALI +++ G
Sbjct: 150 MGRENVEMSEFTLCSVLKCCASLKALEFGRQVHGLVVAMGRDLVVLS-TALIDFYSSVGC 208
Query: 60 IGSACQVF-DESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLR 118
+ A VF KD + +L++G +KN EA K ++ +A+ + SVL
Sbjct: 209 VHHALNVFYGLKGWKDDMIHNSLVSGCIKNGRYREAFKVMSLVKP-----NAVALTSVLV 263
Query: 119 AAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRD 178
+ D GK VH V+ G + + + L+DMY KCG A VFD + +D
Sbjct: 264 CCSEESDLLTGKQVHCVAVRQG-FTFETQLCNVLLDMYAKCGKILQAWSVFDGI--FQKD 320
Query: 179 VVCWSVLVAGYVQCNKFQDAIRVFWNMLSD--NVVPNEFTLTSVLSACAHSGALDQGK 234
V+ W+ ++ GY + +A+ +FW M+ D V+PN T SVLSAC HSG +++GK
Sbjct: 321 VISWTCMIDGYGRNGCGYEAVELFWKMMEDGSEVLPNSVTFLSVLSACGHSGLVEEGK 378
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 66/138 (47%), Gaps = 2/138 (1%)
Query: 37 KLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALK 96
+ GF + N L+ +A G I A VFD KD+I+WT +I+GY +N EA++
Sbjct: 283 RQGFTFETQLCNVLLDMYAKCGKILQAWSVFDGIFQKDVISWTCMIDGYGRNGCGYEAVE 342
Query: 97 CFVKMRSTGTGV--DALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMD 154
F KM G+ V +++T +SVL A +G GK + + + ++ +D
Sbjct: 343 LFWKMMEDGSEVLPNSVTFLSVLSACGHSGLVEEGKQCFNIMKEKYGIDPEPEHYACFID 402
Query: 155 MYFKCGHCDDACKVFDEM 172
+ + G ++ + M
Sbjct: 403 ILGRAGKIEEVWSAYQNM 420
>Medtr7g111120.1 | PPR containing plant-like protein | HC |
chr7:45588277-45586755 | 20130731
Length = 417
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 104/202 (51%), Gaps = 6/202 (2%)
Query: 43 DRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMR 102
D N +I ++ + A Q+FDE +DI++W +I+ Y+ ++L F +M
Sbjct: 98 DTVTWNTMILGYSRLEDVKKARQLFDEMPHRDIVSWCNMISAYLNVGSYMQSLYLFRRML 157
Query: 103 -STGTGVDALTVVSVLRAAAMAGDDNF--GKWVHGFYVQAGRVQLDGYVWSALMDMYFKC 159
G D + VL A GK VHG+ V+ G +L+ + +AL++MY K
Sbjct: 158 FVEGIKPDQVIACLVLSGCAHVERHGLLGGKSVHGYIVKNG-WELNVEIGAALVNMYAKG 216
Query: 160 GHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTS 219
G +A V + M RDV W++++ G V+C ++A+ VF M D V PNE T T
Sbjct: 217 GVLRNAAMVLELM--DERDVTSWTLMICGAVRCGFNKEALVVFEKMQMDGVKPNELTFTG 274
Query: 220 VLSACAHSGALDQGKLVHQYIE 241
VLSACAH G ++ G+ + IE
Sbjct: 275 VLSACAHGGFVEDGRRYFKMIE 296
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 92/225 (40%), Gaps = 58/225 (25%)
Query: 77 AWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAA--------MAGDDNF 128
+W I + P +A++ + KM G +D ++ L+++ A
Sbjct: 4 SWALAIKKAYSSSSPRKAIQLYSKMHRNGVPIDTFCILFTLKSSTRLPIIHHLHAHIIKL 63
Query: 129 GKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAG 188
G H F++ L+ YV+ + +D AC +FDEMP RD V W+ ++ G
Sbjct: 64 GFTSH-FHIST--CLLNSYVFLSFLD----------ACILFDEMPQ--RDTVTWNTMILG 108
Query: 189 YVQCNKFQDAIRVF----------W-NMLS---------------------DNVVPNEFT 216
Y + + A ++F W NM+S + + P++
Sbjct: 109 YSRLEDVKKARQLFDEMPHRDIVSWCNMISAYLNVGSYMQSLYLFRRMLFVEGIKPDQVI 168
Query: 217 LTSVLSACAH--SGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
VLS CAH L GK VH YI LN VE+G ALV+M
Sbjct: 169 ACLVLSGCAHVERHGLLGGKSVHGYIVKNGWELN-VEIGAALVNM 212
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 86/190 (45%), Gaps = 10/190 (5%)
Query: 4 KGVEPDQHTFPLLLK---MFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFI 60
+G++PDQ L+L + + ++ I K G++L+ G AL++ +A G +
Sbjct: 160 EGIKPDQVIACLVLSGCAHVERHGLLGGKSVHGYIVKNGWELNVEIGAALVNMYAKGGVL 219
Query: 61 GSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAA 120
+A V + +D+ +WT +I G V+ EAL F KM+ G + LT VL A
Sbjct: 220 RNAAMVLELMDERDVTSWTLMICGAVRCGFNKEALVVFEKMQMDGVKPNELTFTGVLSAC 279
Query: 121 AMAGDDNFGKWVHGFYVQAG---RVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYR 177
A G G+ + G RVQ ++ L+ + K G ++A ++ M
Sbjct: 280 AHGGFVEDGRRYFKMIEECGLKPRVQH----YACLVYLIGKSGMLEEAYEIIKMMKVEPD 335
Query: 178 DVVCWSVLVA 187
VV S L A
Sbjct: 336 VVVLGSFLSA 345
>Medtr4g011730.1 | PPR containing plant-like protein | HC |
chr4:2939745-2937455 | 20130731
Length = 706
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 110/195 (56%), Gaps = 11/195 (5%)
Query: 48 NALISAFANSGFIGSACQVF-------DESSVK-DIIAWTALINGYVKNDLPSEALKCFV 99
NALIS++A+SG A +VF S V+ ++I+W+A+I+G+ ++L+ F
Sbjct: 333 NALISSYADSGLCDDAYEVFLKLEKSNGHSPVRPNVISWSAVISGFASKGRLEKSLELFR 392
Query: 100 KMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKC 159
+M+ + +T+ SVL A N G+ +H + ++ + + V + L++MY KC
Sbjct: 393 QMQLAKVMANCVTISSVLSVCAELAALNLGRELHAYAIR-NLMDDNILVGNGLVNMYMKC 451
Query: 160 GHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTS 219
G ++A VFD + RD++ W+ L+ GY ++A+R F M++ + P++ T +
Sbjct: 452 GVFEEAHLVFDNIKG--RDLISWNSLIGGYGMHGLGENAVRTFDEMINAGLRPDKITFVA 509
Query: 220 VLSACAHSGALDQGK 234
VLSAC+H+G + G+
Sbjct: 510 VLSACSHAGLVAAGR 524
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 135/332 (40%), Gaps = 74/332 (22%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M + G PD T PL++K SK V +++ + + GF N L+ +
Sbjct: 117 MMKFGFLPDGFTLPLIIKSCSKIGSVGLCKIVHCHVLETGFKNHVHVVNELVGMYGKVRR 176
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKN------------------------------- 88
+ AC+VFD V+ +++W L++GY N
Sbjct: 177 MEDACKVFDGMVVRSVLSWNTLVSGYAFNFDYVGAFRVFKRMELEGLEPNYVTWTSLLSS 236
Query: 89 ----DLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAG---- 140
L E ++ F MR G + V VL A GK +HGF ++ G
Sbjct: 237 HARCGLFDETMELFKVMRIKGIEISGEAVAVVLSVCADMDGVQRGKEIHGFVIKGGYEDY 296
Query: 141 --------------RVQL-DGY------------VWSALMDMYFKCGHCDDACKVFDEMP 173
R L D + W+AL+ Y G CDDA +VF ++
Sbjct: 297 LFVKNALIGIYGKKREDLGDAHKIFSDIKNKSLVSWNALISSYADSGLCDDAYEVFLKLE 356
Query: 174 YS------YRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHS 227
S +V+ WS +++G+ + + ++ +F M V+ N T++SVLS CA
Sbjct: 357 KSNGHSPVRPNVISWSAVISGFASKGRLEKSLELFRQMQLAKVMANCVTISSVLSVCAEL 416
Query: 228 GALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
AL+ G+ +H Y + + +++ +G LV+M
Sbjct: 417 AALNLGRELHAY-AIRNLMDDNILVGNGLVNM 447
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 106/228 (46%), Gaps = 5/228 (2%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDI--IAWTALINGYVKN 88
I+ Q+ F LI+ ++ I A ++F + + + + W ++I V +
Sbjct: 45 IHTQLILTTTHHSSFLSARLIATYSRFNSISEARKIFTTTPFESLSNLVWNSIIRANVSH 104
Query: 89 DLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYV 148
+ A+K + +M G D T+ ++++ + G K VH ++ G + +V
Sbjct: 105 GYYNYAVKIYHQMMKFGFLPDGFTLPLIIKSCSKIGSVGLCKIVHCHVLETG-FKNHVHV 163
Query: 149 WSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSD 208
+ L+ MY K +DACKVFD M R V+ W+ LV+GY + A RVF M +
Sbjct: 164 VNELVGMYGKVRRMEDACKVFDGMVV--RSVLSWNTLVSGYAFNFDYVGAFRVFKRMELE 221
Query: 209 NVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTAL 256
+ PN T TS+LS+ A G D+ + + + K + ++ + L
Sbjct: 222 GLEPNYVTWTSLLSSHARCGLFDETMELFKVMRIKGIEISGEAVAVVL 269
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 77/168 (45%), Gaps = 4/168 (2%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
++A + D + GN L++ + G A VFD +D+I+W +LI GY + L
Sbjct: 425 LHAYAIRNLMDDNILVGNGLVNMYMKCGVFEEAHLVFDNIKGRDLISWNSLIGGYGMHGL 484
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
A++ F +M + G D +T V+VL A + AG G+ + V ++ ++
Sbjct: 485 GENAVRTFDEMINAGLRPDKITFVAVLSACSHAGLVAAGRNLFDRMVTEFSIEPTVEHYA 544
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDA 198
++D+ + G +A + MP + V W L+ C ++D
Sbjct: 545 CMVDLLGRAGLLQEAHDIVRNMPIEPNECV-WGALLN---SCRMYRDT 588
>Medtr3g011920.1 | PPR containing plant-like protein | HC |
chr3:3106602-3104668 | 20130731
Length = 627
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 108/212 (50%), Gaps = 5/212 (2%)
Query: 49 ALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGV 108
LI + SG A +VF+E +++I+W A++ G K EA+K F+ M G
Sbjct: 231 TLIGGYLKSGRFEDALRVFNEMPERNVISWNAMVGGCSKIGHNEEAVKFFIDMLREGFIP 290
Query: 109 DALTVVSVLRAAAMAGDDNFGKWVHGFYVQ-AGRVQLDGYVWSALMDMYFKCGHCDDACK 167
+ T + AA+ FG+ H ++ G+ L+ +V ++L+ Y KCG D+
Sbjct: 291 NESTFPCAISAASNIASLGFGRSFHACAIKFLGK--LNDFVGNSLISFYAKCGSMKDSLL 348
Query: 168 VFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHS 227
+FD++ R+VV W+ ++ GY + +AI +F M S+ + PN+ +L +L AC H+
Sbjct: 349 IFDKI--CKRNVVSWNAVICGYAHNGRGAEAISLFERMCSEGIKPNKVSLLGLLLACNHA 406
Query: 228 GALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
G +D+G L + +L E +VD+
Sbjct: 407 GLVDEGFLYFNKARIESPNLLKPEHYACMVDL 438
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 107/254 (42%), Gaps = 37/254 (14%)
Query: 16 LLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDE-SSVKD 74
++ FS P PF Y D F ++S AC +FDE +
Sbjct: 67 IISRFSTP--HFPFCTYQTKTHHSHDKTNFLHTGFQPNGSDSITFDVACNMFDEMPELLT 124
Query: 75 IIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHG 134
+ T +I + K +A+ F +M ++ + T +VL + G GK +HG
Sbjct: 125 VGLVTEIITSFSKQSRHEDAIYLFSRMLASTIRPNEFTFGTVLNTSTRLGKVGVGKQIHG 184
Query: 135 FYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNK 194
++ + +V SAL+D+Y K ++A K F++ Y +VV ++ L+ GY++ +
Sbjct: 185 CAIKTSLCS-NVFVGSALVDLYVKLSSIEEAQKAFEDT--EYPNVVSYTTLIGGYLKSGR 241
Query: 195 FQDAIRVF----------WN---------------------MLSDNVVPNEFTLTSVLSA 223
F+DA+RVF WN ML + +PNE T +SA
Sbjct: 242 FEDALRVFNEMPERNVISWNAMVGGCSKIGHNEEAVKFFIDMLREGFIPNESTFPCAISA 301
Query: 224 CAHSGALDQGKLVH 237
++ +L G+ H
Sbjct: 302 ASNIASLGFGRSFH 315
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 93/196 (47%), Gaps = 16/196 (8%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPF--MIYAQIFKLGFDLDRFAGNALISAFANSG 58
M ++G P++ TFP + S + F +A K L+ F GN+LIS +A G
Sbjct: 283 MLREGFIPNESTFPCAISAASN-IASLGFGRSFHACAIKFLGKLNDFVGNSLISFYAKCG 341
Query: 59 FIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLR 118
+ + +FD+ +++++W A+I GY N +EA+ F +M S G + ++++ +L
Sbjct: 342 SMKDSLLIFDKICKRNVVSWNAVICGYAHNGRGAEAISLFERMCSEGIKPNKVSLLGLLL 401
Query: 119 AAAMAG--DDNFGKWVHGFYVQAGRVQ----LDGYVWSALMDMYFKCGHCDDACKVFDEM 172
A AG D+ F Y R++ L ++ ++D+ + G +A M
Sbjct: 402 ACNHAGLVDEGF------LYFNKARIESPNLLKPEHYACMVDLLARSGRFTEAQNFIRRM 455
Query: 173 PYSYRDVVCWSVLVAG 188
P++ + W ++ G
Sbjct: 456 PFN-PGIGFWKAILGG 470
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 57/99 (57%), Gaps = 6/99 (6%)
Query: 163 DDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLS 222
D AC +FDEMP V + ++ + + ++ +DAI +F ML+ + PNEFT +VL+
Sbjct: 110 DVACNMFDEMP-ELLTVGLVTEIITSFSKQSRHEDAIYLFSRMLASTIRPNEFTFGTVLN 168
Query: 223 ACAHSGALDQGKLVHQYIECK-KVSL-NSVELGTALVDM 259
G + GK +H C K SL ++V +G+ALVD+
Sbjct: 169 TSTRLGKVGVGKQIHG---CAIKTSLCSNVFVGSALVDL 204
>Medtr5g025580.1 | PPR containing plant-like protein | HC |
chr5:10385696-10382561 | 20130731
Length = 767
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 105/212 (49%), Gaps = 10/212 (4%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
+++ K F D N+LI+ + I SA +VF S+ ++ W +I+ N
Sbjct: 444 LHSLALKSPFGSDTRVQNSLITMYDRCRDINSARKVFKFHSISNLCTWNCMISALSHNKE 503
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
EAL+ F R + T+VSVL A G GK VHG+ + G Q + ++ +
Sbjct: 504 SREALELF---RHLQFKPNEFTIVSVLSACTRIGVLIHGKQVHGYTFRYG-YQQNSFISA 559
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV 210
AL+D+Y CG D+A KVF +S + W+ ++A Y + AI +F M +
Sbjct: 560 ALVDLYSTCGRLDNAVKVF---RHSQKSESAWNSMIAAYGNHGNGEKAIELFHEMCDLGI 616
Query: 211 VPNEFTLTSVLSACAHSGALDQGKLVHQYIEC 242
+ T S+LSAC+HSG ++QG QY EC
Sbjct: 617 KVTKSTFVSLLSACSHSGLVNQGL---QYYEC 645
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/226 (32%), Positives = 116/226 (51%), Gaps = 9/226 (3%)
Query: 36 FKLGFDLDRFAGNALISAFANSGFIGSACQVFDE-SSVKDIIAWTALINGYVKNDLPSEA 94
K GF N+L+ + NSG + S + E SS+ DI +W +I G V+ D EA
Sbjct: 346 LKSGFLNHTLLVNSLMQMYINSGDLTSGFSILQENSSIADIASWNTIIVGCVRGDQFQEA 405
Query: 95 LKCFVKMRSTGT-GVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALM 153
L+ F+ MR + D++T+V+VL A A N GK +H +++ D V ++L+
Sbjct: 406 LETFMLMRQGPSFNYDSITLVNVLSAVANIELLNQGKSLHSLALKS-PFGSDTRVQNSLI 464
Query: 154 DMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPN 213
MY +C + A KVF +S ++ W+ +++ + ++A+ +F ++ PN
Sbjct: 465 TMYDRCRDINSARKVFK--FHSISNLCTWNCMISALSHNKESREALELFRHL---QFKPN 519
Query: 214 EFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
EFT+ SVLSAC G L GK VH Y NS + ALVD+
Sbjct: 520 EFTIVSVLSACTRIGVLIHGKQVHGYTFRYGYQQNSF-ISAALVDL 564
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 120/232 (51%), Gaps = 6/232 (2%)
Query: 31 IYAQIFKLGFDLDRFA--GNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKN 88
I+ Q KLG+ + F N+LIS ++ + A VF E + KDI++W A++ GY N
Sbjct: 135 IHGQGIKLGYKDNSFVSVANSLISLYSQCEAVDVAETVFREMAYKDIVSWNAMMEGYASN 194
Query: 89 DLPSEALKCFVKMRSTGT-GVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGY 147
+ EA V+M++TG D +T+ ++L A G+ +HG+ ++ V
Sbjct: 195 ENIHEAFDLMVEMQTTGCFQPDIVTLTTMLPLCAELMLYREGRTIHGYAIRRHMVPDHLP 254
Query: 148 VWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLS 207
+ + L+DMY KC + A +F + D+V W+ +++GY Q ++ A +F +L
Sbjct: 255 LRNGLIDMYSKCNVVEKAELLFHST--AQIDLVSWNAMISGYSQNKYYEKAQNLFKELLC 312
Query: 208 DNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
+ T+ ++LS+C + +L+ GK VH + + K LN L +L+ M
Sbjct: 313 CGQNCSSSTVFAILSSCNSANSLNFGKSVHIW-QLKSGFLNHTLLVNSLMQM 363
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 118/235 (50%), Gaps = 8/235 (3%)
Query: 30 MIYAQIFKLGFDLDRFAGNALISAFANSGFIGSA---CQVFDESSVKDIIAWTALINGYV 86
+I+ K G +D NALI+ +A G + S+ C +F+E KD+++W +++ G +
Sbjct: 31 VIHCVSIKSGMLVDISLCNALINMYAKCGDVNSSDSEC-LFEEMEYKDVVSWNSIMRGCL 89
Query: 87 KNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAG-RVQLD 145
N ++L F +M + D +++ + A + G+ FG+ +HG ++ G +
Sbjct: 90 YNGDLEKSLCYFRRMNFSEERADHVSLSCAISACSSLGELAFGECIHGQGIKLGYKDNSF 149
Query: 146 GYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNM 205
V ++L+ +Y +C D A VF EM +Y+D+V W+ ++ GY +A + M
Sbjct: 150 VSVANSLISLYSQCEAVDVAETVFREM--AYKDIVSWNAMMEGYASNENIHEAFDLMVEM 207
Query: 206 LSDNVV-PNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
+ P+ TLT++L CA +G+ +H Y + + + + L L+DM
Sbjct: 208 QTTGCFQPDIVTLTTMLPLCAELMLYREGRTIHGYAIRRHMVPDHLPLRNGLIDM 262
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 97/191 (50%), Gaps = 3/191 (1%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTG 107
N LI ++ + A +F ++ D+++W A+I+GY +N +A F ++ G
Sbjct: 257 NGLIDMYSKCNVVEKAELLFHSTAQIDLVSWNAMISGYSQNKYYEKAQNLFKELLCCGQN 316
Query: 108 VDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACK 167
+ TV ++L + A NFGK VH + +++G + V ++LM MY G
Sbjct: 317 CSSSTVFAILSSCNSANSLNFGKSVHIWQLKSGFLNHTLLV-NSLMQMYINSGDLTSGFS 375
Query: 168 VFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSD-NVVPNEFTLTSVLSACAH 226
+ E S D+ W+ ++ G V+ ++FQ+A+ F M + + TL +VLSA A+
Sbjct: 376 ILQENS-SIADIASWNTIIVGCVRGDQFQEALETFMLMRQGPSFNYDSITLVNVLSAVAN 434
Query: 227 SGALDQGKLVH 237
L+QGK +H
Sbjct: 435 IELLNQGKSLH 445
>Medtr7g109860.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:45010556-45008657 | 20130731
Length = 512
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 122/260 (46%), Gaps = 44/260 (16%)
Query: 1 MRQKGVEPDQHTFPLLLK-MFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M + GV P+ +T LL+ + S + ++A F LG L+ F G++LI A+A
Sbjct: 97 MGRAGVVPNDYTISTLLRAVISTELDVLVRQVHALAFHLGHYLNVFVGSSLIRAYAGLKE 156
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ + F++ S+KD+ +W AL++ Y++ G VDA T +
Sbjct: 157 EEALGRAFNDISMKDVTSWNALVSSYME----------------LGKFVDAQTAFDQMP- 199
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
Q + W+ L++ Y K + A VFD+M S R+V
Sbjct: 200 -----------------------QRNIISWTTLVNGYVKNKQVNKARSVFDDM--SERNV 234
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQY 239
V W+ +++GYVQ +F DA+++F M PN FT +SVL ACA S +L G +H
Sbjct: 235 VSWTAMISGYVQNKRFVDALKLFVLMFKTETRPNHFTFSSVLDACAGSSSLIMGLQLHPC 294
Query: 240 IECKKVSLNSVELGTALVDM 259
I K N V T+LVDM
Sbjct: 295 I-IKSGIANDVIWLTSLVDM 313
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 105/189 (55%), Gaps = 10/189 (5%)
Query: 49 ALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGV 108
L++ + + + A VFD+ S +++++WTA+I+GYV+N +ALK FV M T T
Sbjct: 208 TLVNGYVKNKQVNKARSVFDDMSERNVVSWTAMISGYVQNKRFVDALKLFVLMFKTETRP 267
Query: 109 DALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVW-SALMDMYFKCGHCDDACK 167
+ T SVL A A + G +H +++G + +W ++L+DMY KCG D A
Sbjct: 268 NHFTFSSVLDACAGSSSLIMGLQLHPCIIKSGIA--NDVIWLTSLVDMYAKCGDMDAAFG 325
Query: 168 VFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVV--PNEFTLTSVLSACA 225
VF+ + +++V W+ ++ GY A+ F M VV P+E T +VLSAC
Sbjct: 326 VFESI--RDKNLVSWNAIIGGYASHGLATRALEEFDRM---KVVGTPDEVTFVNVLSACV 380
Query: 226 HSGALDQGK 234
H+G +++G+
Sbjct: 381 HAGLVEEGE 389
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 83/159 (52%), Gaps = 12/159 (7%)
Query: 35 IFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEA 94
I K G D +L+ +A G + +A VF+ K++++W A+I GY + L + A
Sbjct: 295 IIKSGIANDVIWLTSLVDMYAKCGDMDAAFGVFESIRDKNLVSWNAIIGGYASHGLATRA 354
Query: 95 LKCFVKMRSTGTGVDALTVVSVLRAAAMA-----GDDNFGKWVHGFYVQAGRVQLDGYVW 149
L+ F +M+ GT D +T V+VL A A G+ +F + + +QA +++ Y
Sbjct: 355 LEEFDRMKVVGTP-DEVTFVNVLSACVHAGLVEEGEKHFTDMLTKYGIQA---EMEHY-- 408
Query: 150 SALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAG 188
S ++D+Y + G D+A + MP+ DVV W L+A
Sbjct: 409 SCMVDLYGRAGRFDEAENLIKNMPFE-PDVVLWGALLAA 446
>Medtr4g108660.1 | PPR containing plant-like protein | HC |
chr4:44998985-45001066 | 20130731
Length = 460
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 127/297 (42%), Gaps = 66/297 (22%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKP--VVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSG 58
+R + PD +F LK + +++ F+ GFD F G LIS +A G
Sbjct: 103 LRHPTLLPDSFSFAFTLKGIANDGCSKRQGIQLHSHAFRHGFDDHIFVGTTLISMYAECG 162
Query: 59 FIGSACQVFDESSVKDIIAWTALIN-------------------------------GYVK 87
A +VFDE S +++AW A++ GYVK
Sbjct: 163 CYEYARKVFDEMSQPNVVAWNAVVTACFRCGDVEGAWGLFERMPVRNLTSWNTMLAGYVK 222
Query: 88 NDLPSEALKCFVKMR---------------STGTGVDA----------------LTVVSV 116
A + F +M+ +G+ DA +++ V
Sbjct: 223 AGQLWLARRVFCEMKMRDDASWSTMIVGFAKSGSFHDAFGFFKELLRDRNRPSEVSLTGV 282
Query: 117 LRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSY 176
L A A AG FGK +HGF +AG + + V +AL+D Y KCG+ D A VF M +
Sbjct: 283 LSACAQAGAFEFGKILHGFMEKAGFLCIVS-VNNALIDTYSKCGNVDMAKLVFQHMS-AE 340
Query: 177 RDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
+ +V W+ ++A + +AIRVF M V P+ T S+L AC+HSG ++QG
Sbjct: 341 KCIVSWTSMIAALAMHGRADEAIRVFHEMEESGVRPDGVTFISLLYACSHSGLVEQG 397
>Medtr1g084570.1 | PPR containing plant-like protein | HC |
chr1:37638715-37636265 | 20130731
Length = 606
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 133/262 (50%), Gaps = 8/262 (3%)
Query: 1 MRQKGVEPDQHTFPLLLKMF-SKPVVEDPFMIYAQIFKLGFDLDR-FAGNALISAFANS- 57
M + GV+P+ T +LK S + +++ K+G + NAL+ +A
Sbjct: 98 MLRDGVKPNAFTVSAVLKACKSLKALLCGKLVHGLAIKIGTQGSSIYVDNALMDMYATCC 157
Query: 58 GFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVL 117
+ +A VF++ K+ ++WT LI GY L+ F +M + + +
Sbjct: 158 DSMDNARLVFEDIGTKNAVSWTTLITGYTHRRDAFGGLRVFRQMFMEEGELSPFSFSIAV 217
Query: 118 RAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYR 177
A A G N GK VH + G + + V +A++DMY +C +A ++F EM + +
Sbjct: 218 SACASIGSSNLGKQVHAAVINHG-FESNLPVMNAILDMYCRCRCASEAKQLFGEM--TQK 274
Query: 178 DVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVH 237
D + W+ L+AG+ + ++ ++ +F M+S+ PN FT TSV++ACA+ L G+ +H
Sbjct: 275 DTITWNTLIAGFETLDSYE-SLCIFSQMVSEGFSPNCFTFTSVIAACANLAILYCGQQLH 333
Query: 238 QYIECKKVSLNSVELGTALVDM 259
I + + N++EL AL+DM
Sbjct: 334 GGIIHRGLD-NNLELSNALIDM 354
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 96/192 (50%), Gaps = 3/192 (1%)
Query: 50 LISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVD 109
LI ++ + G A +FDE +D+IAWT++I GY + S A F M G +
Sbjct: 47 LIKSYFDKGSFEEAHTLFDEMPHRDVIAWTSMITGYTSCNHHSRAWNVFTNMLRDGVKPN 106
Query: 110 ALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFK-CGHCDDACKV 168
A TV +VL+A GK VHG ++ G YV +ALMDMY C D+A V
Sbjct: 107 AFTVSAVLKACKSLKALLCGKLVHGLAIKIGTQGSSIYVDNALMDMYATCCDSMDNARLV 166
Query: 169 FDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSG 228
F+++ ++ V W+ L+ GY +RVF M + + F+ + +SACA G
Sbjct: 167 FEDI--GTKNAVSWTTLITGYTHRRDAFGGLRVFRQMFMEEGELSPFSFSIAVSACASIG 224
Query: 229 ALDQGKLVHQYI 240
+ + GK VH +
Sbjct: 225 SSNLGKQVHAAV 236
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 107/203 (52%), Gaps = 4/203 (1%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
++A + GF+ + NA++ + A Q+F E + KD I W LI G+ D
Sbjct: 232 VHAAVINHGFESNLPVMNAILDMYCRCRCASEAKQLFGEMTQKDTITWNTLIAGFETLD- 290
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
E+L F +M S G + T SV+ A A G+ +HG + G + + + +
Sbjct: 291 SYESLCIFSQMVSEGFSPNCFTFTSVIAACANLAILYCGQQLHGGIIHRG-LDNNLELSN 349
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV 210
AL+DMY KCG+ D+ K+F M ++ ++V W+ ++ GY ++A+ +F M+ +
Sbjct: 350 ALIDMYAKCGNVADSHKIFSGMRHT--NLVSWTSMMIGYGAHGHGKEAVDLFNEMVGSGI 407
Query: 211 VPNEFTLTSVLSACAHSGALDQG 233
P++ +VLSAC+H+G +D+G
Sbjct: 408 KPDKIVFMAVLSACSHAGLVDEG 430
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 62/108 (57%), Gaps = 2/108 (1%)
Query: 152 LMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVV 211
L+ YF G ++A +FDEMP+ RDV+ W+ ++ GY CN A VF NML D V
Sbjct: 47 LIKSYFDKGSFEEAHTLFDEMPH--RDVIAWTSMITGYTSCNHHSRAWNVFTNMLRDGVK 104
Query: 212 PNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
PN FT+++VL AC AL GKLVH +S+ + AL+DM
Sbjct: 105 PNAFTVSAVLKACKSLKALLCGKLVHGLAIKIGTQGSSIYVDNALMDM 152
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 91/197 (46%), Gaps = 8/197 (4%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
++ I G D + NALI +A G + + ++F ++++WT+++ GY +
Sbjct: 332 LHGGIIHRGLDNNLELSNALIDMYAKCGNVADSHKIFSGMRHTNLVSWTSMMIGYGAHGH 391
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
EA+ F +M +G D + ++VL A + AG + G V D +++
Sbjct: 392 GKEAVDLFNEMVGSGIKPDKIVFMAVLSACSHAGLVDEGLRYFRLMTSYYNVAPDRDIYA 451
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKF-QDAIRVFWNMLSDN 209
++D+ + G +A ++ + MP+ + + W L+ C K+ Q +I+ +
Sbjct: 452 CVVDLLSRAGRVKEAYELIENMPFKPDESI-WVALLGA---CKKYKQPSIQKLAALKVLE 507
Query: 210 VVPNE---FTLTSVLSA 223
+ PN+ + L S SA
Sbjct: 508 MKPNKAGTYVLLSNFSA 524
>Medtr8g075460.1 | PPR containing plant-like protein | HC |
chr8:31911388-31913406 | 20130731
Length = 672
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 97/187 (51%), Gaps = 3/187 (1%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTG 107
N +I+ + N G + A +VF+ K +I+W +++ G +N PSEAL F M
Sbjct: 365 NTMITVYCNCGRVEDAKEVFNSMPNKTLISWNSILVGLTQNACPSEALDTFSMMNKLDVK 424
Query: 108 VDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACK 167
+D + SV+ A A+ G+ + G + G ++ D + ++L+D Y KCG + K
Sbjct: 425 MDKFSFASVISACAIKSSLELGEQLFGKAITLG-LESDQIICTSLVDFYCKCGLVEMGRK 483
Query: 168 VFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHS 227
VFD M + D V W+ ++ GY +A+ +F M V P+ T T +LSAC H
Sbjct: 484 VFDGMIKT--DEVSWNTMLMGYATNGYGIEALTLFNEMGYSGVRPSAITFTGILSACDHC 541
Query: 228 GALDQGK 234
G +++G+
Sbjct: 542 GLVEEGR 548
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 105/225 (46%), Gaps = 34/225 (15%)
Query: 41 DLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVK 100
++D F+ +AL+S +AN+G + A +VFD + W ++I+GYV N EAL F K
Sbjct: 226 EVDDFSLSALVSGYANAGRMSDARKVFDNKVDPCSVLWNSIISGYVSNGEEMEALALFNK 285
Query: 101 MRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCG 160
MR G D V ++L ++ + K +H + G D V S L+D Y KC
Sbjct: 286 MRRNGVWGDFSAVANILSISSSLLNVELVKQMHDHAFKIGATH-DIVVASTLLDAYSKCQ 344
Query: 161 HCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVF----------WNM----L 206
H D+CK+F E+ D + + ++ Y C + +DA VF WN L
Sbjct: 345 HPHDSCKLFHEL--KVYDAILLNTMITVYCNCGRVEDAKEVFNSMPNKTLISWNSILVGL 402
Query: 207 SDNVVPNE-----------------FTLTSVLSACAHSGALDQGK 234
+ N P+E F+ SV+SACA +L+ G+
Sbjct: 403 TQNACPSEALDTFSMMNKLDVKMDKFSFASVISACAIKSSLELGE 447
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 86/189 (45%), Gaps = 10/189 (5%)
Query: 44 RFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMR- 102
++ N ++S + SG + A +F+ +K+ + W ++I+GY ++ P +L F +M
Sbjct: 92 HYSWNLIVSTLSKSGDLQQAQALFNAMPMKNPLVWNSMIHGYSRHGYPRNSLLLFKEMNL 151
Query: 103 --STGTGVDALTVVSVLRAAAMAGDDNFGKWVHG-FYVQAGRVQLDGYVWSALMDMYFKC 159
DA + +V A A + GK VH ++ + D + S++++ Y KC
Sbjct: 152 DPLETVHRDAFVLSTVFGACADLFALDCGKQVHARVFIDGFEFEQDKVLCSSIVNFYGKC 211
Query: 160 GHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTS 219
G D A +V + D S LV+GY + DA +VF N V P S
Sbjct: 212 GDLDSAARVVGFVKEV--DDFSLSALVSGYANAGRMSDARKVFDN----KVDPCSVLWNS 265
Query: 220 VLSACAHSG 228
++S +G
Sbjct: 266 IISGYVSNG 274
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 85/196 (43%), Gaps = 12/196 (6%)
Query: 1 MRQKGVEPDQHTFPLLLKMFS-KPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M + V+ D+ +F ++ + K +E ++ + LG + D+ +L+ + G
Sbjct: 418 MNKLDVKMDKFSFASVISACAIKSSLELGEQLFGKAITLGLESDQIICTSLVDFYCKCGL 477
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ +VFD D ++W ++ GY N EAL F +M +G A+T +L A
Sbjct: 478 VEMGRKVFDGMIKTDEVSWNTMLMGYATNGYGIEALTLFNEMGYSGVRPSAITFTGILSA 537
Query: 120 A-----AMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPY 174
G D F H + + G +S ++D++ + G +A + +EMP+
Sbjct: 538 CDHCGLVEEGRDLFRTMKHDYDINPGIEH-----YSCMVDLFARVGCFGEAMYLIEEMPF 592
Query: 175 SYRDVVCWSVLVAGYV 190
D W ++ G V
Sbjct: 593 Q-ADANMWLSVLRGCV 607
>Medtr8g035960.1 | PPR containing plant-like protein | HC |
chr8:13156718-13159093 | 20130731
Length = 791
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 130/262 (49%), Gaps = 7/262 (2%)
Query: 1 MRQKGVEPDQHTFPLLLKMFS-KPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
MR GV P+ TF LL + + +V++ M++ K ++ N+LI+ +A
Sbjct: 377 MRVDGVYPNDVTFIGLLHAITIRNMVKEGLMVHGLCLKSCLSSEQNVSNSLITMYAKFES 436
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
I + ++F+E + + I+W ALI+GY +N L EA F+ + T SVL A
Sbjct: 437 IQESKKIFEELNYQGTISWNALISGYAQNGLCKEAFLTFLSAIKE-IKPNQYTFGSVLNA 495
Query: 120 AAMAGDDNF--GKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYR 177
A A D + G+ H ++ G + D +V AL+DMY K G+ +++ +VF+E P +
Sbjct: 496 IAAAEDISLKHGQRCHSHLIKLG-LNTDPFVAGALLDMYGKRGNINESQRVFNETP--EK 552
Query: 178 DVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVH 237
W+ +++ Y + ++ + ++ + + + T SVL+AC G +D G ++
Sbjct: 553 TQFSWTGMISAYARHGDYESVMSLYKEIEREGSNLDSITFLSVLAACCRKGMVDVGHIIF 612
Query: 238 QYIECKKVSLNSVELGTALVDM 259
+ K + E + +VDM
Sbjct: 613 DSMVKKHSIEPTPEHYSIMVDM 634
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 117/234 (50%), Gaps = 13/234 (5%)
Query: 29 FMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKN 88
+++ + K GF + F GNAL++ ++ G + A +VF+E +++D+++W A+++GY +
Sbjct: 207 LQLHSLVVKCGFGCEVFIGNALVTMYSRWGGLDEAGRVFNEMTIRDLVSWNAMLSGYAQE 266
Query: 89 D--LPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDG 146
EA+ F M G +D +++ + A + FGK +HG + G
Sbjct: 267 GECYGLEAVLLFGNMVREGMLLDHVSLTGAISACGYTKNLEFGKQIHGLAQKLG-YGTHV 325
Query: 147 YVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNML 206
V + L+ Y KC DA VF +M S R+VV W+ L++ ++ + +F M
Sbjct: 326 AVCNVLISTYSKCKVLRDAKAVFQDM--SARNVVSWTTLIS-----IDEENVVSLFNAMR 378
Query: 207 SDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVE-LGTALVDM 259
D V PN+ T +L A + +G +VH C K L+S + + +L+ M
Sbjct: 379 VDGVYPNDVTFIGLLHAITIRNMVKEGLMVHGL--CLKSCLSSEQNVSNSLITM 430
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 121/246 (49%), Gaps = 23/246 (9%)
Query: 9 DQHTFPLLLKM------FSKPVVEDPFMIYAQIFKL----GFDLDRFAGNALISAFANSG 58
+Q FP L + S F++ AQI GF N+L+ + +G
Sbjct: 74 NQTQFPFLQNIDEVTLALSFKACRGEFILGAQIHGFVVATGFVSRVTVSNSLMKMYCKAG 133
Query: 59 FIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLR 118
A VF+ S DI++W +++G+ K+ + + CF M G D +T + L
Sbjct: 134 RFELALCVFEGLSCPDIVSWNTILSGFEKS-VDALNFACF--MHLNGVVFDPVTYTTALS 190
Query: 119 AAAMAG--DDN---FGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMP 173
DD+ FG +H V+ G + ++ +AL+ MY + G D+A +VF+EM
Sbjct: 191 FCWDRDYWDDHGFLFGLQLHSLVVKCG-FGCEVFIGNALVTMYSRWGGLDEAGRVFNEM- 248
Query: 174 YSYRDVVCWSVLVAGYVQCNKFQ--DAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALD 231
+ RD+V W+ +++GY Q + +A+ +F NM+ + ++ + +LT +SAC ++ L+
Sbjct: 249 -TIRDLVSWNAMLSGYAQEGECYGLEAVLLFGNMVREGMLLDHVSLTGAISACGYTKNLE 307
Query: 232 QGKLVH 237
GK +H
Sbjct: 308 FGKQIH 313
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 87/175 (49%), Gaps = 7/175 (4%)
Query: 4 KGVEPDQHTFPLLLKMFSKPVVEDPFMIYAQ-----IFKLGFDLDRFAGNALISAFANSG 58
K ++P+Q+TF +L + ED + + Q + KLG + D F AL+ + G
Sbjct: 480 KEIKPNQYTFGSVLNAIA--AAEDISLKHGQRCHSHLIKLGLNTDPFVAGALLDMYGKRG 537
Query: 59 FIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLR 118
I + +VF+E+ K +WT +I+ Y ++ + + ++ G+ +D++T +SVL
Sbjct: 538 NINESQRVFNETPEKTQFSWTGMISAYARHGDYESVMSLYKEIEREGSNLDSITFLSVLA 597
Query: 119 AAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMP 173
A G + G + V+ ++ +S ++DM + G D+A ++ ++P
Sbjct: 598 ACCRKGMVDVGHIIFDSMVKKHSIEPTPEHYSIMVDMLGRVGRLDEAEELMHQIP 652
>Medtr5g067140.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:28350546-28353833 | 20130731
Length = 770
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 106/228 (46%), Gaps = 7/228 (3%)
Query: 14 PLLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVK 73
PLL + +I+ I K G D F + L++ +A G + A QVFD + +
Sbjct: 83 PLLQQCLENCSFSSTQIIHCHIVKTGSHEDPFLSSFLVTVYAKCGRMECAQQVFDHMNRR 142
Query: 74 DIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDA-LTVVSVLRAAAMAGDDNFGKWV 132
+ +AWT L+ GYV+N +P A+ F +M + T+ L A G+ +
Sbjct: 143 NAVAWTNLMKGYVQNSMPKHAIHLFEEMLLHSECYPSNYTLAIALNACTSLHSLKLGEQL 202
Query: 133 HGFYVQAGRVQLDGYVWSALMDMYFKC-GHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQ 191
H + ++ V D + +AL +Y KC G + F + +DV+ W+ ++ +
Sbjct: 203 HAYIIKY-HVDFDTSIGNALCSLYTKCGGKLEVGLTAFRRI--KEKDVISWTAAISACGE 259
Query: 192 CNKFQDAIRVFWNMLSD--NVVPNEFTLTSVLSACAHSGALDQGKLVH 237
+ +RVF ML D V PNE+TLTS LS C L+ G VH
Sbjct: 260 KGEAMKGVRVFVEMLLDEVQVQPNEYTLTSALSQCCEVKCLELGIQVH 307
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 96/191 (50%), Gaps = 6/191 (3%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPV-VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
+ + G++PD TF +L + SK + +E I+A+ K GF D G+++I+ + G
Sbjct: 387 LNRSGMKPDPFTFSSVLSVCSKMMALEQGEQIHARTIKTGFLSDVVVGSSMINMYNKCGS 446
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
I A +VF E S++ +I WT +I G+ ++ +AL F M+ G + +T V VL A
Sbjct: 447 IERASKVFLEMSIRTMILWTTMITGFAQHGWSKQALNLFEDMKLVGIRPNLVTFVGVLSA 506
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQ--LDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYR 177
AG N + +++ +D YV L+DM + G +A + +M Y
Sbjct: 507 CGSAGMVNEAFNYFEIMQKEYKIKPVMDHYV--CLVDMLVRLGQVQEAFDLIKKMDYKAS 564
Query: 178 DVVCWSVLVAG 188
+ + WS L+ G
Sbjct: 565 EFI-WSNLIVG 574
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 114/243 (46%), Gaps = 18/243 (7%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFAN-SGFIGSACQVFDESSVKDIIAWTALINGYVKND 89
++A I K D D GNAL S + G + F KD+I+WTA I+ +
Sbjct: 202 LHAYIIKYHVDFDTSIGNALCSLYTKCGGKLEVGLTAFRRIKEKDVISWTAAISACGEKG 261
Query: 90 LPSEALKCFVKMRSTGTGV--DALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGY 147
+ ++ FV+M V + T+ S L G VH + G + +
Sbjct: 262 EAMKGVRVFVEMLLDEVQVQPNEYTLTSALSQCCEVKCLELGIQVHALCTKLG-YESNLR 320
Query: 148 VWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQ----------- 196
V ++L+ +Y KCG +A ++F M + ++V W+ ++AG+ Q +
Sbjct: 321 VRNSLLYLYLKCGCIVEAQRLFKGM--NDVNLVTWNAMIAGHAQMMELSKDNLSAYQKGI 378
Query: 197 DAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTAL 256
+A+ +F + + P+ FT +SVLS C+ AL+QG+ +H K L+ V +G+++
Sbjct: 379 EALNLFSKLNRSGMKPDPFTFSSVLSVCSKMMALEQGEQIHART-IKTGFLSDVVVGSSM 437
Query: 257 VDM 259
++M
Sbjct: 438 INM 440
>Medtr3g088825.1 | PPR containing plant-like protein | HC |
chr3:40650693-40652499 | 20130731
Length = 555
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 107/216 (49%), Gaps = 23/216 (10%)
Query: 41 DLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVK 100
D+D F+ +AL+S +AN+G + A +VFD + W ++I+GYV N EAL F +
Sbjct: 194 DVDDFSLSALVSGYANAGRMSDARRVFDNKVDPCSVLWNSIISGYVSNGEEMEALDLFNQ 253
Query: 101 MRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCG 160
MR +G + V ++L AA+ + K +H + G D V S L+D Y KC
Sbjct: 254 MRRSGVRGEFPAVANILSAASSLLNFELVKQMHDHAFKIGATH-DIVVASTLLDAYSKCQ 312
Query: 161 HCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVP-------- 212
H +AC++FDE+ D + + ++ Y C + +DA +F M + ++
Sbjct: 313 HSHEACELFDEL--KVYDAILLNTMITVYCNCGRIEDAKGIFQTMPNKTLISWNSILALD 370
Query: 213 ------------NEFTLTSVLSACAHSGALDQGKLV 236
++F+ SV+SACA +L+ G+ V
Sbjct: 371 TFSRMNMLDVKMDKFSFASVISACAIKSSLELGEQV 406
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 119/268 (44%), Gaps = 35/268 (13%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPFMIYAQI----FKLGFDLDRFAGNALISAFAN 56
MR+ GV + FP + + S F + Q+ FK+G D + L+ A++
Sbjct: 254 MRRSGVRGE---FPAVANILSAASSLLNFELVKQMHDHAFKIGATHDIVVASTLLDAYSK 310
Query: 57 SGFIGSACQVFDESSVKDIIAWTALINGY-----------VKNDLPSE---------ALK 96
AC++FDE V D I +I Y + +P++ AL
Sbjct: 311 CQHSHEACELFDELKVYDAILLNTMITVYCNCGRIEDAKGIFQTMPNKTLISWNSILALD 370
Query: 97 CFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMY 156
F +M +D + SV+ A A+ G+ V G + G ++ D ++++L+D Y
Sbjct: 371 TFSRMNMLDVKMDKFSFASVISACAIKSSLELGEQVFGKAITLG-LESDQIIYTSLVDFY 429
Query: 157 FKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFT 216
KCG + KVFD M + D V W+ ++ GY +A+ +F M V P+ T
Sbjct: 430 CKCGIVEMGRKVFDGMIRT--DEVSWNTMLMGYATNGYGIEALTLFNEMEYSGVRPSAIT 487
Query: 217 LTSVLSACAHSGALDQGK-----LVHQY 239
VLSAC H G +++G+ + H+Y
Sbjct: 488 FNGVLSACDHCGLVEEGRNLFRTMKHEY 515
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 88/189 (46%), Gaps = 10/189 (5%)
Query: 44 RFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKM-- 101
++ N L+S F+ SG + A +F+ +K+ + W ++I+GY ++ P +A+ F +M
Sbjct: 60 HYSWNQLVSTFSKSGDLQQAHNLFNAMPMKNPLVWNSMIHGYSRHGYPRKAILLFKEMIF 119
Query: 102 -RSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHG-FYVQAGRVQLDGYVWSALMDMYFKC 159
DA + +V A A + GK VH ++ + D + S+++++Y KC
Sbjct: 120 DPLETMHRDAFVLSTVFGACADLFVLDCGKQVHARVFIDGFEFKHDKVLCSSIVNLYGKC 179
Query: 160 GHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTS 219
G D A V + D S LV+GY + DA RVF N V P S
Sbjct: 180 GDLDIAVWVVGFVMDV--DDFSLSALVSGYANAGRMSDARRVFDN----KVDPCSVLWNS 233
Query: 220 VLSACAHSG 228
++S +G
Sbjct: 234 IISGYVSNG 242
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 65/149 (43%), Gaps = 10/149 (6%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
++ + LG + D+ +L+ + G + +VFD D ++W ++ GY N
Sbjct: 406 VFGKAITLGLESDQIIYTSLVDFYCKCGIVEMGRKVFDGMIRTDEVSWNTMLMGYATNGY 465
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAA-----AMAGDDNFGKWVHGFYVQAGRVQLD 145
EAL F +M +G A+T VL A G + F H + + G
Sbjct: 466 GIEALTLFNEMEYSGVRPSAITFNGVLSACDHCGLVEEGRNLFRTMKHEYDINPGIEH-- 523
Query: 146 GYVWSALMDMYFKCGHCDDACKVFDEMPY 174
+S ++D++ + G +A V +EMP+
Sbjct: 524 ---YSCMVDLFARAGCFGEAMYVIEEMPF 549
>Medtr4g119120.1 | PPR containing plant-like protein | HC |
chr4:49335688-49337418 | 20130731
Length = 576
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 104/187 (55%), Gaps = 5/187 (2%)
Query: 49 ALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGV 108
+I+ ++ SG + SA ++FD+ KD++++ A+I Y ++ P EAL F M + +
Sbjct: 268 TMIAGYSKSGDVHSARELFDQMDDKDLLSYNAMIACYAQSSKPKEALDLFNVMLKPDSSL 327
Query: 109 --DALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDAC 166
D +T+ SV+ A + G+ +W+ G V LD ++ +AL+D+Y KCG D A
Sbjct: 328 HPDKMTLASVISACSQLGNLEHWRWIESQINNFGIV-LDDHLATALIDLYAKCGSIDKAY 386
Query: 167 KVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAH 226
++F + RDVV +S ++ G + DA+ +F M + ++PN T T +L+A H
Sbjct: 387 ELFHGL--RKRDVVAYSAMIYGCGINGRASDAVELFERMAGECIIPNLVTYTGILTAYNH 444
Query: 227 SGALDQG 233
+G ++G
Sbjct: 445 AGLAEEG 451
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 136/294 (46%), Gaps = 48/294 (16%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPF---MIYAQIFKLGFDLDRFAGNALISAFANS 57
MR+ G+ P H +LK ++ VED +I+ + K GFD + AL+ +
Sbjct: 95 MRRIGLCPSSHAVSSILKSCAR--VEDDLCGLLIHGHVHKFGFDACVYVQTALLDLYCKI 152
Query: 58 GFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVL 117
G + +A +VFDE K++++W +L++GY+K E + F D + + V+
Sbjct: 153 GDVVTARKVFDEMPDKNVVSWNSLLSGYIKGGNLDEGQRFF----------DEIPLKDVI 202
Query: 118 RAAAM-AGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMP--- 173
M +G GK Y+ + + W+ ++ Y CG +A ++FD MP
Sbjct: 203 SWNCMVSGYAKAGKMDRACYLFQQMPERNFASWNTMITGYVDCGSIVEARELFDAMPRRN 262
Query: 174 ----------YSY----------------RDVVCWSVLVAGYVQCNKFQDAIRVFWNMLS 207
YS +D++ ++ ++A Y Q +K ++A+ +F ML
Sbjct: 263 SVSLITMIAGYSKSGDVHSARELFDQMDDKDLLSYNAMIACYAQSSKPKEALDLFNVMLK 322
Query: 208 --DNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
++ P++ TL SV+SAC+ G L+ + + I + L+ L TAL+D+
Sbjct: 323 PDSSLHPDKMTLASVISACSQLGNLEHWRWIESQINNFGIVLDD-HLATALIDL 375
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 80/165 (48%), Gaps = 18/165 (10%)
Query: 74 DIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVH 133
D +W +I + + EA+ +V+MR G + V S+L++ A DD G +H
Sbjct: 68 DSFSWGCVIRFFSQKGQFVEAVSLYVQMRRIGLCPSSHAVSSILKSCARVEDDLCGLLIH 127
Query: 134 GFYVQAGRVQLDG--YVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQ 191
G + G D YV +AL+D+Y K G A KVFDEMP ++VV W+ L++GY++
Sbjct: 128 GHVHKFG---FDACVYVQTALLDLYCKIGDVVTARKVFDEMP--DKNVVSWNSLLSGYIK 182
Query: 192 CNKFQDAIRVFWNMLSDNVVPNEFTLTSVLS-ACAHSGALDQGKL 235
+ R F +E L V+S C SG GK+
Sbjct: 183 GGNLDEGQRFF----------DEIPLKDVISWNCMVSGYAKAGKM 217
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 82/183 (44%), Gaps = 5/183 (2%)
Query: 6 VEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSAC 64
+ PD+ T ++ S+ +E I +QI G LD ALI +A G I A
Sbjct: 327 LHPDKMTLASVISACSQLGNLEHWRWIESQINNFGIVLDDHLATALIDLYAKCGSIDKAY 386
Query: 65 QVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAG 124
++F +D++A++A+I G N S+A++ F +M + +T +L A AG
Sbjct: 387 ELFHGLRKRDVVAYSAMIYGCGINGRASDAVELFERMAGECIIPNLVTYTGILTAYNHAG 446
Query: 125 DDNFGKWVHGFYVQAGRV-QLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWS 183
G G V +D Y ++D+ + G D+A K+ +MP +V W
Sbjct: 447 LAEEGYRCFISMKDNGIVPSVDHY--GIMVDLLGRAGWLDEAYKLIMKMPMQ-PNVGVWG 503
Query: 184 VLV 186
L+
Sbjct: 504 ALL 506
>Medtr7g082550.1 | PPR containing plant-like protein | HC |
chr7:31648795-31646693 | 20130731
Length = 487
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 104/200 (52%), Gaps = 19/200 (9%)
Query: 36 FKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEAL 95
++GF + + G++LIS ++ G +G A +VFDE SV+++++WTA+I G+ + L
Sbjct: 135 IRIGFIANVYVGSSLISLYSRCGLLGDAYRVFDEMSVRNVVSWTAIIAGFAQEWRVDMCL 194
Query: 96 KCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDM 155
+ F +MR + T S+L A +G G+ VH +Q G +V +AL+ M
Sbjct: 195 ELFRRMRGLELKPNYFTYTSLLSACMGSGALGHGRGVHCQIIQMG-FHCYLHVENALIAM 253
Query: 156 YFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEF 215
Y KCG DA +F+ M +DVV W+ ++ G +R+ V P+
Sbjct: 254 YSKCGVIVDALYIFENM--VSKDVVTWNSMIVG----------MRIM------GVNPDAV 295
Query: 216 TLTSVLSACAHSGALDQGKL 235
T +LS+C H G + +G++
Sbjct: 296 TFLGILSSCRHGGLVKEGQV 315
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 71/133 (53%), Gaps = 3/133 (2%)
Query: 105 GTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDD 164
G G+D + L D G H ++ G + + YV S+L+ +Y +CG D
Sbjct: 103 GLGIDVCFLSHALSLCGSKRDFYGGIQYHCLAIRIGFIA-NVYVGSSLISLYSRCGLLGD 161
Query: 165 ACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSAC 224
A +VFDEM S R+VV W+ ++AG+ Q + + +F M + PN FT TS+LSAC
Sbjct: 162 AYRVFDEM--SVRNVVSWTAIIAGFAQEWRVDMCLELFRRMRGLELKPNYFTYTSLLSAC 219
Query: 225 AHSGALDQGKLVH 237
SGAL G+ VH
Sbjct: 220 MGSGALGHGRGVH 232
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 82/196 (41%), Gaps = 22/196 (11%)
Query: 2 RQKGVE--PDQHTFPLLLKM-FSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSG 58
R +G+E P+ T+ LL + ++ QI ++GF NALI+ ++ G
Sbjct: 199 RMRGLELKPNYFTYTSLLSACMGSGALGHGRGVHCQIIQMGFHCYLHVENALIAMYSKCG 258
Query: 59 FIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLR 118
I A +F+ KD++ W ++I G MR G DA+T + +L
Sbjct: 259 VIVDALYIFENMVSKDVVTWNSMIVG----------------MRIMGVNPDAVTFLGILS 302
Query: 119 AAAMAGDDNFGKWVHGFYVQAG-RVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYR 177
+ G G+ V G + +LD Y S ++D+ + G +A MP
Sbjct: 303 SCRHGGLVKEGQVYFSSMVDHGLQPELDHY--SCIVDLLGRAGLLLEALDFIQNMPVCPN 360
Query: 178 DVVCWSVLVAGYVQCN 193
V+ S+L + + N
Sbjct: 361 AVIWGSLLSSSRLHGN 376
>Medtr8g065040.1 | PPR containing plant-like protein | HC |
chr8:27316294-27314321 | 20130731
Length = 657
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 120/228 (52%), Gaps = 4/228 (1%)
Query: 4 KGVEPDQHTFPLLLK-MFSKPVVEDPFMIYAQIFKLGF-DLDRFAGNALISAFANSGFIG 61
+GVE + TF LL+ SK + MI++ + K+GF + + F NAL+ +++ G
Sbjct: 198 EGVEANGVTFCYLLRGCSSKRRFHEGEMIHSCVLKMGFVEYNVFVANALVDFYSSCGCFV 257
Query: 62 SACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAA 121
SA + F+ V+D+I+W ++++ Y N+L ++AL+ F M+ G + + L +
Sbjct: 258 SARKCFEGIKVEDVISWNSMVSVYADNNLVNDALEFFNFMQMWGHRPSVRSFIGFLNLCS 317
Query: 122 MAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVC 181
+ GK +H ++ G + YV SAL+DMY KC + VF+ +P + C
Sbjct: 318 RNKEIGLGKQIHCCVMKFGFDERSVYVQSALIDMYGKCLDIQSSVNVFEWLPKMTLE--C 375
Query: 182 WSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGA 229
+ L+ C +D + +F M+ + ++P+E T+++ L A + S +
Sbjct: 376 CNSLMTSLSHCGCVEDVVELFGLMVDEGLMPDEVTVSTTLKALSVSAS 423
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 110/231 (47%), Gaps = 4/231 (1%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
+++++ K GF + F G AL+ + N G G A ++FDE S +++ W + G+ +
Sbjct: 123 VHSRVVKFGFLNNVFVGGALVGFYMNLGLSGVALKLFDELSERNLGVWNVMFRGFCEMGC 182
Query: 91 --PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYV 148
E L + +M G + +T +LR + + G+ +H ++ G V+ + +V
Sbjct: 183 VEVEELLGFYARMCFEGVEANGVTFCYLLRGCSSKRRFHEGEMIHSCVLKMGFVEYNVFV 242
Query: 149 WSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSD 208
+AL+D Y CG A K F+ + DV+ W+ +V+ Y N DA+ F M
Sbjct: 243 ANALVDFYSSCGCFVSARKCFEGIK--VEDVISWNSMVSVYADNNLVNDALEFFNFMQMW 300
Query: 209 NVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
P+ + L+ C+ + + GK +H + SV + +AL+DM
Sbjct: 301 GHRPSVRSFIGFLNLCSRNKEIGLGKQIHCCVMKFGFDERSVYVQSALIDM 351
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 118/241 (48%), Gaps = 9/241 (3%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDR--FAGNALISAFANS 57
M+ G P +F L + S+ + I+ + K GFD +R + +ALI +
Sbjct: 297 MQMWGHRPSVRSFIGFLNLCSRNKEIGLGKQIHCCVMKFGFD-ERSVYVQSALIDMYGKC 355
Query: 58 GFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVL 117
I S+ VF+ + +L+ + ++ F M G D +TV + L
Sbjct: 356 LDIQSSVNVFEWLPKMTLECCNSLMTSLSHCGCVEDVVELFGLMVDEGLMPDEVTVSTTL 415
Query: 118 RAAAMAGDDNF--GKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYS 175
+A +++ +F + +H F +++G V+ D V +LMD Y +CGH + + ++F+ +P
Sbjct: 416 KALSVSASASFTSSQSLHCFALKSG-VEGDTTVLCSLMDAYSRCGHWELSHRIFETIPTP 474
Query: 176 YRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKL 235
+ +C++ ++ GY + ++ + + M+ V P+E T L+ C+H+G + QG++
Sbjct: 475 --NAICFTSMINGYARNGMGKEGLLLLHAMIEKGVKPDEVTFLCALTGCSHTGLIQQGRI 532
Query: 236 V 236
+
Sbjct: 533 L 533
>Medtr5g024100.1 | PPR containing plant-like protein | HC |
chr5:9654442-9656866 | 20130731
Length = 754
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 127/266 (47%), Gaps = 20/266 (7%)
Query: 2 RQKGVEPDQHTFPLLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIG 61
++G++PD+ TF LLK S V+ + I+ ++K G ++D +A++ +A +
Sbjct: 203 EEQGLKPDRITFASLLKCCS--VLNEVMQIHGIVYKFGAEVDVVVESAMVDLYAKCRDVS 260
Query: 62 SACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAA 121
S ++FD KD W+++I+GY N+ EA+ F M +D + S L+A
Sbjct: 261 SCRKIFDSMEKKDNFVWSSMISGYTMNNRGEEAVNFFKDMCRQRVKLDQHVLSSTLKACV 320
Query: 122 MAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVC 181
D N G VHG ++ G Q D +V S L+++Y G D K+F + +D+V
Sbjct: 321 EIEDLNTGVQVHGLMIKNGH-QNDCFVASVLLNLYASFGELGDVEKLFSRI--DDKDIVA 377
Query: 182 WSVLVAGYVQ----CNK----FQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
W+ ++ + C + FQ+ R + + TL +VL +C L G
Sbjct: 378 WNSMILAQARPGQGCGRCMQLFQELRRTTFLQIQGA------TLVAVLKSCEKDSDLPAG 431
Query: 234 KLVHQYIECKKVSLNSVELGTALVDM 259
+ +H I + +++ +G ALV M
Sbjct: 432 RQIHSLIVKSSLCRHTL-VGNALVHM 456
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 107/202 (52%), Gaps = 3/202 (1%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
I++ I K GNAL+ ++ I A + F + KD +W+++I +N +
Sbjct: 434 IHSLIVKSSLCRHTLVGNALVHMYSECKQIDDAFKAFVDIVRKDDSSWSSIIGTCKQNRM 493
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
S+AL+ +M G + ++ + A + + GK +H F +++G D Y+ S
Sbjct: 494 ESKALELCKEMLDEGINFTSYSLPLCISACSQLLTISEGKQLHVFAIKSG-YSCDVYIGS 552
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV 210
+++DMY KCG+ +++ KVFDE + V ++ +++GY K Q AI V + + V
Sbjct: 553 SIIDMYAKCGNIEESEKVFDEQLKP--NEVTFNAIISGYAHHGKAQQAIEVLSKLEKNGV 610
Query: 211 VPNEFTLTSVLSACAHSGALDQ 232
PN T +++SAC+H+G +++
Sbjct: 611 APNHVTFLALMSACSHAGYVEE 632
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 110/223 (49%), Gaps = 10/223 (4%)
Query: 6 VEPDQHTFPLLLKMFSKPVV-EDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSAC 64
+EP F L L S P++ I+AQ+ + N L+S ++ S A
Sbjct: 7 LEP----FLLSLAKKSNPIILTQCNQIHAQLIITQYISQTHLANTLLSFYSKSSNFHYAH 62
Query: 65 QVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAG 124
++FD+ ++++ WT LI+ ++K S+A + F MR + + T +LRA
Sbjct: 63 KLFDKMPNRNVVTWTTLISSHLKYGSVSKAFEMFNHMRVSDERPNENTFAVLLRACTNRE 122
Query: 125 DDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCG-HCDDACKVFDEMPYSYRDVVCWS 183
+ G +HG V+ G ++ + + S+L+ MY K G DA +VF + RDVV W+
Sbjct: 123 LWSVGLQIHGLLVRCG-LEREKFAGSSLVYMYLKGGDDLRDALRVFYGLL--ERDVVAWN 179
Query: 184 VLVAGYVQCNKFQDAIRVFWNMLSDN-VVPNEFTLTSVLSACA 225
V+++G+ Q F+ R+F M + + P+ T S+L C+
Sbjct: 180 VMISGFAQNGDFRMVQRLFSEMWEEQGLKPDRITFASLLKCCS 222
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 127/267 (47%), Gaps = 17/267 (6%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVED---PFMIYAQIFKLGFDLDRFAGNALISAFANS 57
M ++ V+ DQH LK + +ED ++ + K G D F + L++ +A+
Sbjct: 300 MCRQRVKLDQHVLSSTLKACVE--IEDLNTGVQVHGLMIKNGHQNDCFVASVLLNLYASF 357
Query: 58 GFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEA----LKCFVKMRSTG-TGVDALT 112
G +G ++F KDI+AW ++I + P + ++ F ++R T + T
Sbjct: 358 GELGDVEKLFSRIDDKDIVAWNSMILAQAR---PGQGCGRCMQLFQELRRTTFLQIQGAT 414
Query: 113 VVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEM 172
+V+VL++ D G+ +H V++ + V +AL+ MY +C DDA K F ++
Sbjct: 415 LVAVLKSCEKDSDLPAGRQIHSLIVKSSLCR-HTLVGNALVHMYSECKQIDDAFKAFVDI 473
Query: 173 PYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQ 232
+D WS ++ Q A+ + ML + + ++L +SAC+ + +
Sbjct: 474 VR--KDDSSWSSIIGTCKQNRMESKALELCKEMLDEGINFTSYSLPLCISACSQLLTISE 531
Query: 233 GKLVHQYIECKKVSLNSVELGTALVDM 259
GK +H + S + V +G++++DM
Sbjct: 532 GKQLHVFAIKSGYSCD-VYIGSSIIDM 557
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/169 (20%), Positives = 82/169 (48%), Gaps = 1/169 (0%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPV-VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M +G+ ++ PL + S+ + + + ++ K G+ D + G+++I +A G
Sbjct: 504 MLDEGINFTSYSLPLCISACSQLLTISEGKQLHVFAIKSGYSCDVYIGSSIIDMYAKCGN 563
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
I + +VFDE + + + A+I+GY + +A++ K+ G + +T ++++ A
Sbjct: 564 IEESEKVFDEQLKPNEVTFNAIISGYAHHGKAQQAIEVLSKLEKNGVAPNHVTFLALMSA 623
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKV 168
+ AG + + +++ +S L+D Y + G ++A ++
Sbjct: 624 CSHAGYVEETSHLFTLMLDKYKIKPKSEHYSCLVDAYGRAGRLEEAYQI 672
>Medtr4g078750.1 | PPR containing plant-like protein | HC |
chr4:30434764-30433246 | 20130731
Length = 470
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 130/270 (48%), Gaps = 40/270 (14%)
Query: 1 MRQKGVEPDQHTFPLLLKMFS-------------KPVVEDPFM------IYAQIF----- 36
M V P+ HTFP LLK S + ++ DPF+ +YA+
Sbjct: 79 MLANNVSPNTHTFPPLLKSSSAFVVTPLHCQALKRGILSDPFVLTTLLVVYARTNHIVCA 138
Query: 37 -KLGFDLDRF---AGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPS 92
K+ ++ F A NA+I+AF +G + A VF+ +D+++WT ++NG+ +
Sbjct: 139 QKVFEEVPMFCIVASNAMINAFTMNGNMEGALLVFEWMPYRDVVSWTTMVNGFALSGNFG 198
Query: 93 EALKCFVKMRSTGTGVDAL------TVVSVLRAAAM---AGDDNFGKWVHGFYVQAGRVQ 143
A++ F M +D L T VSVL + G +FG+ VHG+ V G V
Sbjct: 199 AAIRFFGTMMRHKDVLDCLVKPNEATYVSVLSSCTELEGKGALDFGRQVHGYIVVKG-VD 257
Query: 144 LDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFW 203
L +V ++L+++Y K G + + VF M R+V W+ +++ + ++A+ +F
Sbjct: 258 LGVFVGTSLINLYGKMGCLNYSASVFRVM--VVREVCTWNAMISSLASNGREKEALDLFE 315
Query: 204 NMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
M + PN T +VL+ACA G + +G
Sbjct: 316 KMKLQGLKPNSITFVAVLTACARGGFVSEG 345
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 85/175 (48%), Gaps = 8/175 (4%)
Query: 6 VEPDQHTFPLLL----KMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIG 61
V+P++ T+ +L ++ K ++ ++ I G DL F G +LI+ + G +
Sbjct: 218 VKPNEATYVSVLSSCTELEGKGALDFGRQVHGYIVVKGVDLGVFVGTSLINLYGKMGCLN 277
Query: 62 SACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAA 121
+ VF V+++ W A+I+ N EAL F KM+ G +++T V+VL A A
Sbjct: 278 YSASVFRVMVVREVCTWNAMISSLASNGREKEALDLFEKMKLQGLKPNSITFVAVLTACA 337
Query: 122 MAGDDNFGKWVHGFYVQAGRVQLDGYV--WSALMDMYFKCGHCDDACKVFDEMPY 174
G + G + F + + Q+ + + ++D+ + GH +A ++ MP+
Sbjct: 338 RGGFVSEG--LELFESMSSKFQVVPVMEHYGCVVDLLGRAGHIQEAAEIIRNMPF 390
>Medtr7g113540.1 | PPR containing plant-like protein | HC |
chr7:46789868-46787166 | 20130731
Length = 650
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 111/210 (52%), Gaps = 3/210 (1%)
Query: 24 VVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALIN 83
V+ D I+ ++KLG D +AL+ ++ G + +A Q+F+ + D ++ T ++
Sbjct: 266 VLRDGQKIHGLLWKLGMQSDLCIESALMDLYSKCGSLDAAWQIFESAEELDGVSLTVILV 325
Query: 84 GYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQ 143
+ +N EA++ F KM + G VDA V +VL + GK +H ++ +
Sbjct: 326 AFAQNGFEEEAIQIFTKMVALGMEVDANMVSAVLGVFGVGTYLALGKQIHSLIIKKNFCE 385
Query: 144 LDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFW 203
+ +V + L++MY KCG D+ VF +M + ++ V W+ ++A + + A++ +
Sbjct: 386 -NPFVGNGLVNMYSKCGDLSDSLLVFYQM--TQKNSVSWNSVIAAFARHGDGFKALQFYE 442
Query: 204 NMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
M + V P + T S+L AC+H+G +++G
Sbjct: 443 EMRVEGVAPTDVTFLSLLHACSHAGLVEKG 472
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 120/231 (51%), Gaps = 5/231 (2%)
Query: 30 MIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKND 89
MI+ +F GF+ + GNALI+++ +VFDE ++++ WTA+I+G +N+
Sbjct: 170 MIHGLVFVGGFEREITVGNALITSYFKCECFSQGRKVFDEMIERNVVTWTAVISGLAQNE 229
Query: 90 LPSEALKCFVKMRSTGT-GVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYV 148
++L+ F +MR G+ + LT +S L A + G+ +HG + G +Q D +
Sbjct: 230 FYEDSLRLFAQMRCCGSVSPNVLTYLSSLMACSGLQVLRDGQKIHGLLWKLG-MQSDLCI 288
Query: 149 WSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSD 208
SALMD+Y KCG D A ++F+ D V +V++ + Q ++AI++F M++
Sbjct: 289 ESALMDLYSKCGSLDAAWQIFESA--EELDGVSLTVILVAFAQNGFEEEAIQIFTKMVAL 346
Query: 209 NVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
+ + +++VL L GK +H I K N +G LV+M
Sbjct: 347 GMEVDANMVSAVLGVFGVGTYLALGKQIHSLIIKKNFCENPF-VGNGLVNM 396
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 109/222 (49%), Gaps = 18/222 (8%)
Query: 31 IYAQIFKL--GFDLD------RFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALI 82
I+A+I K FD D F N+L+S ++ G +A VFD V+D ++W +I
Sbjct: 56 IHARIIKQPPSFDFDGSQRNALFIWNSLLSMYSKCGEFRNAGNVFDYMPVRDTVSWNTMI 115
Query: 83 NGYVKNDLPSEALKCFVKMRSTGT---GVDALTVVSVLRAA---AMAGDDNFGKWVHGFY 136
+G+++N + K F +M + D T+ ++L + + + +HG
Sbjct: 116 SGFLRNGDFDTSFKFFKQMTESNRVCCRFDKATLTTMLSGCDGLRLGISTSVTQMIHGL- 174
Query: 137 VQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQ 196
V G + + V +AL+ YFKC KVFDEM R+VV W+ +++G Q ++
Sbjct: 175 VFVGGFEREITVGNALITSYFKCECFSQGRKVFDEMI--ERNVVTWTAVISGLAQNEFYE 232
Query: 197 DAIRVFWNML-SDNVVPNEFTLTSVLSACAHSGALDQGKLVH 237
D++R+F M +V PN T S L AC+ L G+ +H
Sbjct: 233 DSLRLFAQMRCCGSVSPNVLTYLSSLMACSGLQVLRDGQKIH 274
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 77/157 (49%), Gaps = 1/157 (0%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
I++ I K F + F GN L++ ++ G + + VF + + K+ ++W ++I + ++
Sbjct: 374 IHSLIIKKNFCENPFVGNGLVNMYSKCGDLSDSLLVFYQMTQKNSVSWNSVIAAFARHGD 433
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
+AL+ + +MR G +T +S+L A + AG G + + ++
Sbjct: 434 GFKALQFYEEMRVEGVAPTDVTFLSLLHACSHAGLVEKGMELLESMTNDHGISPRSEHYA 493
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVA 187
++DM + GH ++A K + +P + V+ W L+
Sbjct: 494 CVVDMLGRAGHLNEAKKFIEGLP-EHGGVLVWQALLG 529
>Medtr1g007600.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:452191-449631 | 20130731
Length = 827
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 128/297 (43%), Gaps = 70/297 (23%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKD---------------- 74
++ + K GF + + GNALI + G + A +V + + KD
Sbjct: 156 VHGMVLKHGFVTNVYVGNALIDMYGKCGSLDEAKKVLEGMTQKDCVSWNSIITACVANGV 215
Query: 75 -------------------IIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVS 115
++ W+A+I G+ N E+++ F +M G DA T+ S
Sbjct: 216 VYEALDLLENMLLSELEPNVVTWSAVIGGFSSNAYDVESVELFARMVGAGVAPDARTLAS 275
Query: 116 VLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPY- 174
VL A + GK +HG+ V+ + +G+V +AL+ MY +CG A K+F +
Sbjct: 276 VLPACSRMKWLFVGKELHGYIVRH-ELFSNGFVANALVGMYRRCGDMKSAFKIFSKFARK 334
Query: 175 ---SY-----------------------------RDVVCWSVLVAGYVQCNKFQDAIRVF 202
SY RD + W+ +++G+V F DA+ +F
Sbjct: 335 CAASYNTMIVGYLENGNVGKAKELFYQMEQEGVERDRISWNCMISGHVDNFMFDDALMLF 394
Query: 203 WNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
++L + + P+ FTL S+L+ A + QGK +H K + NS +G ALV+M
Sbjct: 395 RDLLMEGIEPDSFTLGSILTGFADMTCIRQGKEIHSIAIVKGLQSNSF-VGGALVEM 450
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 117/266 (43%), Gaps = 39/266 (14%)
Query: 4 KGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGS 62
+G+EPD T +L F+ + I++ G + F G AL+ + I +
Sbjct: 400 EGIEPDSFTLGSILTGFADMTCIRQGKEIHSIAIVKGLQSNSFVGGALVEMYCKCNDIIA 459
Query: 63 ACQVFDESSVKDIIAWTALINGY-----------------------------------VK 87
A FDE S +D W ALI+GY V+
Sbjct: 460 AQMAFDEISERDTSTWNALISGYARCNQIGKIRELVERMKSDGFEPNVYTWNSILAGLVE 519
Query: 88 NDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGY 147
N A++ F +M+ + D TV +L A + + GK VH + ++AG D +
Sbjct: 520 NKQYDLAMQLFNEMQVSSLRPDIYTVGIILAACSKLATIHRGKQVHAYSIRAG-YDSDAH 578
Query: 148 VWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLS 207
+ + L+DMY KCG +V++++ S ++VC + ++ Y ++ I +F ML
Sbjct: 579 IGATLVDMYAKCGSIKHCYQVYNKI--SNPNLVCHNAMLTAYAMHGHGEEGIVIFRRMLD 636
Query: 208 DNVVPNEFTLTSVLSACAHSGALDQG 233
V P+ T SVLS+C H+G++ G
Sbjct: 637 SRVRPDHVTFLSVLSSCVHAGSIKIG 662
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 92/188 (48%), Gaps = 7/188 (3%)
Query: 48 NALISAFANSGFIGSACQVF----DESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRS 103
N +I + +G +G A ++F E +D I+W +I+G+V N + +AL F +
Sbjct: 340 NTMIVGYLENGNVGKAKELFYQMEQEGVERDRISWNCMISGHVDNFMFDDALMLFRDLLM 399
Query: 104 TGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCD 163
G D+ T+ S+L A GK +H + G +Q + +V AL++MY KC
Sbjct: 400 EGIEPDSFTLGSILTGFADMTCIRQGKEIHSIAIVKG-LQSNSFVGGALVEMYCKCNDII 458
Query: 164 DACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSA 223
A FDE+ S RD W+ L++GY +CN+ + M SD PN +T S+L+
Sbjct: 459 AAQMAFDEI--SERDTSTWNALISGYARCNQIGKIRELVERMKSDGFEPNVYTWNSILAG 516
Query: 224 CAHSGALD 231
+ D
Sbjct: 517 LVENKQYD 524
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 114/270 (42%), Gaps = 41/270 (15%)
Query: 11 HTFPLLLKMFSKPVVEDPFM-----IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQ 65
HT PL +S + + +++ K GF F L+ ++ + A
Sbjct: 28 HTPPLTSTTYSTILQSSNSLTLGKQLHSHSIKTGFYNHNFVQTKLLQMYSINSSFEDAWH 87
Query: 66 VFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTG--VDALTVVSVLRAAAMA 123
+FD+ ++K++ +WTA++ ++ L + F + G G +D VL
Sbjct: 88 MFDKMTLKNLHSWTAVLRLHLNMGLFYKGFMLFEEFLCDGLGEKLDFFVFPVVLNICCGL 147
Query: 124 GDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMP---------- 173
GD G+ VHG ++ G V + YV +AL+DMY KCG D+A KV + M
Sbjct: 148 GDLELGRQVHGMVLKHGFVT-NVYVGNALIDMYGKCGSLDEAKKVLEGMTQKDCVSWNSI 206
Query: 174 ----------YSYRD-------------VVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV 210
Y D VV WS ++ G+ +++ +F M+ V
Sbjct: 207 ITACVANGVVYEALDLLENMLLSELEPNVVTWSAVIGGFSSNAYDVESVELFARMVGAGV 266
Query: 211 VPNEFTLTSVLSACAHSGALDQGKLVHQYI 240
P+ TL SVL AC+ L GK +H YI
Sbjct: 267 APDARTLASVLPACSRMKWLFVGKELHGYI 296
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 86/190 (45%), Gaps = 5/190 (2%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M+ + PD +T ++L SK + ++A + G+D D G L+ +A G
Sbjct: 533 MQVSSLRPDIYTVGIILAACSKLATIHRGKQVHAYSIRAGYDSDAHIGATLVDMYAKCGS 592
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
I QV+++ S +++ A++ Y + E + F +M + D +T +SVL +
Sbjct: 593 IKHCYQVYNKISNPNLVCHNAMLTAYAMHGHGEEGIVIFRRMLDSRVRPDHVTFLSVLSS 652
Query: 120 AAMAGDDNFGKWVHGFYV-QAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRD 178
AG G FY+ + + ++ ++D+ + G D+A ++ MP D
Sbjct: 653 CVHAGSIKIG--YECFYLMETYNITPTLKHYTCMVDLLSRAGKLDEAYQLIKNMPME-AD 709
Query: 179 VVCWSVLVAG 188
V WS L+ G
Sbjct: 710 SVTWSALLGG 719
>Medtr6g012850.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:3995998-3993764 | 20130731
Length = 637
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 94/169 (55%), Gaps = 4/169 (2%)
Query: 66 VFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMR-STGTGVDALTVVSVLRAAAMAG 124
+FDE ++ +AWT +I GYV N EA +M G + +T+ SVL A + +G
Sbjct: 211 LFDEMPERNEVAWTVMIVGYVGNGFTKEAFLLLKEMVFGCGFRLSFVTLCSVLSACSQSG 270
Query: 125 DDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSV 184
D G+WVH + V+ + V ++L+DMY KCG + A VF M R+VV W+
Sbjct: 271 DVCVGRWVHCYAVKEMGLDFGVMVGTSLVDMYAKCGRINAALSVFRSM--LKRNVVAWNA 328
Query: 185 LVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
++ G + A+ +F +M+ + V P+ T ++LSAC+HSG +++G
Sbjct: 329 MLGGLAMHGMGKIAVDMFPSMV-EEVKPDGVTFMALLSACSHSGLVEKG 376
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/254 (32%), Positives = 122/254 (48%), Gaps = 45/254 (17%)
Query: 43 DRFAGNALISAFANSGFIGSACQVFDE--SSVKDIIAWTALINGYVKNDLPSEALKCFVK 100
+ F NAL+ + + A ++FDE S KD + +TALI ++ P E+LK F++
Sbjct: 56 NHFLRNALLHLYGSCSLPSHARKLFDEIPQSHKDSVDYTALI----RHCPPFESLKLFIQ 111
Query: 101 MRSTGTGVDALTVVSVLRAAAM--AGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFK 158
MR +D + +V L A A GD G +H V+ G V+ D V +ALM++Y K
Sbjct: 112 MRQFDLPLDGVVMVCALNACARLGGGDTKVGSQMHVGVVKFGFVKFDK-VCNALMNVYVK 170
Query: 159 CGHCDDACK-------------------------------VFDEMPYSYRDVVCWSVLVA 187
G +A K +FDEMP R+ V W+V++
Sbjct: 171 FGLVGEARKMFEGIEVRSVVSWSCFLEGLVKWESVESGRVLFDEMPE--RNEVAWTVMIV 228
Query: 188 GYVQCNKFQDAIRVFWNMLSDNVVPNEF-TLTSVLSACAHSGALDQGKLVHQYIECKKVS 246
GYV ++A + M+ F TL SVLSAC+ SG + G+ VH Y K++
Sbjct: 229 GYVGNGFTKEAFLLLKEMVFGCGFRLSFVTLCSVLSACSQSGDVCVGRWVHCY-AVKEMG 287
Query: 247 LN-SVELGTALVDM 259
L+ V +GT+LVDM
Sbjct: 288 LDFGVMVGTSLVDM 301
>Medtr3g408390.1 | PPR containing plant-like protein | HC |
chr3:1481664-1484476 | 20130731
Length = 392
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 102/180 (56%), Gaps = 11/180 (6%)
Query: 73 KDIIAWTALINGY--VKNDLPSEALK--CFVK--MRSTGTGV--DALTVVSVLRAAAMAG 124
++++ W A+I GY +K+ A+ C K + G+ V + TVV +L AA+ G
Sbjct: 4 RNVVTWNAMITGYCSLKDGNEKNAVNGLCLFKEMLMVGGSEVRPNDTTVVCLLSAASQLG 63
Query: 125 DDNFGKWVHGFYVQA-GRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWS 183
G +HGF V+ +V+ D ++ + L+DMY KCG + A VF M +R+V+ W+
Sbjct: 64 MVEIGVCLHGFAVKVLCKVEDDVFIGTGLVDMYSKCGCLESALSVFRRM--KWRNVLTWT 121
Query: 184 VLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECK 243
+ G + ++A+++ + M SD V PNE T TS+LSAC H+G +++G + + +E K
Sbjct: 122 AMTTGLAIHGRGEEALKILYEMGSDGVKPNETTFTSLLSACCHAGLVEEGLQLFRDMEGK 181
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 68/147 (46%), Gaps = 5/147 (3%)
Query: 43 DRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMR 102
D F G L+ ++ G + SA VF ++++ WTA+ G + EALK +M
Sbjct: 85 DVFIGTGLVDMYSKCGCLESALSVFRRMKWRNVLTWTAMTTGLAIHGRGEEALKILYEMG 144
Query: 103 STGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYV--WSALMDMYFKCG 160
S G + T S+L A AG G + F G+ + ++ + ++D+ + G
Sbjct: 145 SDGVKPNETTFTSLLSACCHAGLVEEG--LQLFRDMEGKFGVVPWIQHYGCVVDLLGRNG 202
Query: 161 HCDDACKVFDEMPYSYRDVVCWSVLVA 187
+ ++A EMP S D + W L++
Sbjct: 203 NLNEAYDFIMEMPIS-PDTLIWRSLLS 228
>Medtr5g008690.1 | PPR containing plant-like protein | HC |
chr5:1878296-1873339 | 20130731
Length = 764
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 116/232 (50%), Gaps = 7/232 (3%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
I+ + FD+ N LI+ ++ + A +F + K +I W A+++G+ D
Sbjct: 350 IHGHAVRTCFDVFDNVKNTLITMYSRCRDLNHAYLLFRKIDEKGLITWNAMLSGFAHMDR 409
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYV-- 148
E +M G + +T+ S+L A + GK H + V+ Q GY+
Sbjct: 410 SEEVSFLLREMLREGVEPNYVTIASILPLCARIANLQHGKEFHCYMVKREE-QFKGYLLL 468
Query: 149 WSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSD 208
W++L++MY + G +A KVFD + S +D V ++ ++ GY + A+++F M
Sbjct: 469 WNSLVEMYSRSGKVLEARKVFDSL--SRKDEVTYTSMIMGYGVSGDGETALKLFAEMRRL 526
Query: 209 NVVPNEFTLTSVLSACAHSGALDQGK-LVHQYIECKKVSLNSVELGTALVDM 259
N+ P+ T+ +VL AC+HSG + QG+ L + IE + VE + +VD+
Sbjct: 527 NIKPDHVTMVAVLIACSHSGLVAQGQVLFRKMIEVYGID-PRVEHYSCMVDL 577
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 118/275 (42%), Gaps = 38/275 (13%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDP-FMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M KGV PD +T+P +LK + + D ++ I + F NAL+ + G
Sbjct: 184 MLSKGVIPDDYTYPSVLKACGELLDYDSGVAVHKAIQESSIKWSLFVHNALVFMYGRFGK 243
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTG-------------- 105
+ A ++FD +D ++W +I+ Y L EA + F MR G
Sbjct: 244 LEVARELFDIMPARDDVSWNTMISCYASRGLWDEAFRLFGCMREAGIERNIIIWNTIAGG 303
Query: 106 ---TG-----------------VDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLD 145
TG +D++ +V L A + G GK +HG V+ D
Sbjct: 304 CLHTGNFKGALKLFSQMRAVIQLDSVAMVVGLNACSHIGAVKLGKEIHGHAVRTCFDVFD 363
Query: 146 GYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNM 205
V + L+ MY +C + A +F ++ + ++ W+ +++G+ ++ ++ + M
Sbjct: 364 N-VKNTLITMYSRCRDLNHAYLLFRKI--DEKGLITWNAMLSGFAHMDRSEEVSFLLREM 420
Query: 206 LSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYI 240
L + V PN T+ S+L CA L GK H Y+
Sbjct: 421 LREGVEPNYVTIASILPLCARIANLQHGKEFHCYM 455
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 106/222 (47%), Gaps = 6/222 (2%)
Query: 7 EPDQHTFPLLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQV 66
+P +H LLL + + I+A I LG + + LI+ +A+ + A V
Sbjct: 93 QPIKH---LLLGCTNLKSLSQGKQIHAHIISLGIHQNPILVSKLINFYASVDLLADAQIV 149
Query: 67 FDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDD 126
+ S+ D + W +I+ YVKN L +A+ + +M S G D T SVL+A D
Sbjct: 150 AECSNSFDPLHWNMVISLYVKNCLFEDAISVYRRMLSKGVIPDDYTYPSVLKACGELLDY 209
Query: 127 NFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLV 186
+ G VH +Q ++ +V +AL+ MY + G + A ++FD MP RD V W+ ++
Sbjct: 210 DSGVAVHK-AIQESSIKWSLFVHNALVFMYGRFGKLEVARELFDIMP--ARDDVSWNTMI 266
Query: 187 AGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSG 228
+ Y + +A R+F M + N ++ C H+G
Sbjct: 267 SCYASRGLWDEAFRLFGCMREAGIERNIIIWNTIAGGCLHTG 308
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 61/113 (53%), Gaps = 3/113 (2%)
Query: 129 GKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAG 188
GK +H + G + + + S L++ Y DA ++ E S+ D + W+++++
Sbjct: 111 GKQIHAHIISLG-IHQNPILVSKLINFYASVDLLADA-QIVAECSNSF-DPLHWNMVISL 167
Query: 189 YVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIE 241
YV+ F+DAI V+ MLS V+P+++T SVL AC D G VH+ I+
Sbjct: 168 YVKNCLFEDAISVYRRMLSKGVIPDDYTYPSVLKACGELLDYDSGVAVHKAIQ 220
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 88/191 (46%), Gaps = 4/191 (2%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPV---VEDPFMIYAQIFKLGFDLDRFAGNALISAFANS 57
M ++GVEP+ T +L + ++ F Y + F N+L+ ++ S
Sbjct: 420 MLREGVEPNYVTIASILPLCARIANLQHGKEFHCYMVKREEQFKGYLLLWNSLVEMYSRS 479
Query: 58 GFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVL 117
G + A +VFD S KD + +T++I GY + ALK F +MR D +T+V+VL
Sbjct: 480 GKVLEARKVFDSLSRKDEVTYTSMIMGYGVSGDGETALKLFAEMRRLNIKPDHVTMVAVL 539
Query: 118 RAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYR 177
A + +G G+ + ++ + +S ++D++ + G D A +V M
Sbjct: 540 IACSHSGLVAQGQVLFRKMIEVYGIDPRVEHYSCMVDLFGRAGLLDKAKEVITGMSCKPT 599
Query: 178 DVVCWSVLVAG 188
+ W+ L+
Sbjct: 600 SAI-WATLIGA 609
>Medtr2g006810.1 | PPR containing plant-like protein | HC |
chr2:618974-616539 | 20130731
Length = 614
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 105/201 (52%), Gaps = 5/201 (2%)
Query: 63 ACQVFDESSVKDIIAWTALIN--GYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAA 120
A +VFDE + KDI A+T++I G+ + A M+ G + +T+VS++ AA
Sbjct: 68 AHKVFDEITNKDIFAYTSMITAYGHSRGSCVYGAFNIASIMQQQGLLPNQVTLVSLMDAA 127
Query: 121 AMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDD-ACKVFDEMPYSYRDV 179
A G+ VHG+ V+ G D + L+DMY KC C A VF +M R
Sbjct: 128 AKLVALQEGRAVHGYAVRRGIGLGDDVFETTLLDMYHKCAGCVGLAASVFAKMDARKRTK 187
Query: 180 V-CWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQ 238
V W+ L+AGY++ + +A +F M+ N++P+ TL +V+ C L +GK +H
Sbjct: 188 VGSWNTLIAGYLRNGQALEAFELFRRMMCRNILPDLLTLANVIFCCVELNYLHRGKSIHG 247
Query: 239 YIECKKVSLNSVELGTALVDM 259
Y+ V L+ V TALVD+
Sbjct: 248 YMIMMGVELDLVA-STALVDL 267
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 127/263 (48%), Gaps = 11/263 (4%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPV-VEDPFMIYAQIFKLGFDL--DRFAGNALISAFANS 57
M+Q+G+ P+Q T L+ +K V +++ ++ + G L D F L +
Sbjct: 108 MQQQGLLPNQVTLVSLMDAAAKLVALQEGRAVHGYAVRRGIGLGDDVFETTLLDMYHKCA 167
Query: 58 GFIGSACQVF---DESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVV 114
G +G A VF D + +W LI GY++N EA + F +M D LT+
Sbjct: 168 GCVGLAASVFAKMDARKRTKVGSWNTLIAGYLRNGQALEAFELFRRMMCRNILPDLLTLA 227
Query: 115 SVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPY 174
+V+ + GK +HG+ + G V+LD +AL+D+Y K A +F+ +
Sbjct: 228 NVIFCCVELNYLHRGKSIHGYMIMMG-VELDLVASTALVDLYCKID-VTKARMLFERL-- 283
Query: 175 SYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGK 234
+D V ++V+++GY++ N +A+ VF M+ NV PN +++SA + + +
Sbjct: 284 ENKDAVVYNVMMSGYLENNLPAEALNVFCEMVKMNVSPNVALFINLISAVSKLRDIRLVR 343
Query: 235 LVHQYIECKKVSLNSVELGTALV 257
+H Y+ K + SVE+ +
Sbjct: 344 SIHGYV-LKHMHNMSVEIANQFI 365
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 84/169 (49%), Gaps = 4/169 (2%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
I+ + +G +LD A AL+ + + A +F+ KD + + +++GY++N+L
Sbjct: 245 IHGYMIMMGVELDLVASTALVDLYCKID-VTKARMLFERLENKDAVVYNVMMSGYLENNL 303
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
P+EAL F +M + ++++ A + D + +HG YV + + +
Sbjct: 304 PAEALNVFCEMVKMNVSPNVALFINLISAVSKLRDIRLVRSIHG-YVLKHMHNMSVEIAN 362
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAI 199
+ Y KCG+ D +VF++M D+V W+ ++ GYV + +A+
Sbjct: 363 QFIHAYAKCGYVVDEREVFNKM--RTMDLVSWNSMIMGYVHNDHIDEAL 409
>Medtr6g060470.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:20800229-20798334 | 20130731
Length = 403
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 97/201 (48%), Gaps = 24/201 (11%)
Query: 34 QIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSE 93
+F D D ++ N +I + SG + A +FDE +D+++W+ +I GYV+ E
Sbjct: 6 NVFDSAIDRDLYSWNTMIGVYVGSGNMIQAKNLFDEMHERDVVSWSTIIAGYVQVGCFME 65
Query: 94 ALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALM 153
L+ F M + + T+VS L ++++ + ++L+
Sbjct: 66 DLEFFHNMLQSEVKPNEYTMVSAL-----------------------AIKMNDRLLASLI 102
Query: 154 DMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPN 213
DMY KCG D A VF E R V W+ ++ G+ K ++AI +F M + V PN
Sbjct: 103 DMYAKCGEIDSASSVFHEHKVK-RKVWPWNAMIGGFAMHGKPEEAISLFEQMKVERVSPN 161
Query: 214 EFTLTSVLSACAHSGALDQGK 234
+ T ++L+AC+H + +GK
Sbjct: 162 KVTFIALLNACSHGYMIKEGK 182
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 56/104 (53%), Gaps = 4/104 (3%)
Query: 142 VQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRV 201
+ D Y W+ ++ +Y G+ A +FDEM RDVV WS ++AGYVQ F + +
Sbjct: 12 IDRDLYSWNTMIGVYVGSGNMIQAKNLFDEM--HERDVVSWSTIIAGYVQVGCFMEDLEF 69
Query: 202 FWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKV 245
F NML V PNE+T+ S L+ + L L+ Y +C ++
Sbjct: 70 FHNMLQSEVKPNEYTMVSALAIKMNDRLL--ASLIDMYAKCGEI 111
>Medtr5g038580.1 | PPR containing plant-like protein | HC |
chr5:16954387-16952525 | 20130731
Length = 620
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 92/179 (51%), Gaps = 5/179 (2%)
Query: 65 QVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAG 124
++ DE + D W +LI+G+ + + EA K F KM+ G + S+L +
Sbjct: 329 RMVDEGILPDSATWNSLISGFAQKGVCVEAFKYFSKMQCAGVAPCLKILTSLLSVCGDSC 388
Query: 125 DDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSV 184
K +HG+ ++ V D ++ +AL+D Y KCG A VFD+ D W+
Sbjct: 389 VLRSAKAIHGYALRIC-VDKDDFLATALVDTYMKCGCVSFARFVFDQFDVKPDDPAFWNA 447
Query: 185 LVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG----KLVHQY 239
++ GY ++ A VF+ ML + V PN T SVLSAC+HSG +++G +++ +Y
Sbjct: 448 MIGGYGTNGDYESAFEVFYEMLDEMVQPNSATFVSVLSACSHSGQIERGLRFFRMIRKY 506
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 136/261 (52%), Gaps = 20/261 (7%)
Query: 8 PDQHTFPLLLKM---FSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFA-NSGFIGSA 63
P+ TFP+LLK S P +++A +FK GF ALI+++A N+ A
Sbjct: 33 PNTFTFPILLKACSNLSSP--SQTQILHAHLFKTGFHSHPHTSTALIASYAANTRSFHYA 90
Query: 64 CQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMA 123
++FDE I A+ A+++G +N +A+ F ++ +++T+VS+L A +
Sbjct: 91 LELFDEMPQPTITAFNAVLSGLSRNGPRGQAVWLFRQIGFWNIRPNSVTIVSLLSARDVK 150
Query: 124 GDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWS 183
+ + VH + G V+ D YV ++L+ Y KCG + KVF+ + ++VV ++
Sbjct: 151 NQSHV-QQVHCLACKLG-VEYDVYVSTSLVTAYSKCGVLVSSNKVFENL--RVKNVVTYN 206
Query: 184 VLVAGYVQCNKFQDAIRVFWNMLSDNVV-----PNEFTLTSVLSACAHSGALDQGKLVHQ 238
++G +Q N F RV +++ D + PN+ TL SV+SACA + GK VH
Sbjct: 207 AFMSGLLQ-NGFH---RVVFDVFKDMTMNLEEKPNKVTLVSVVSACATLSNIRLGKQVHG 262
Query: 239 YIECKKVSLNSVELGTALVDM 259
+ K + + V + T+LVDM
Sbjct: 263 -LSMKLEACDHVMVVTSLVDM 282
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 107/211 (50%), Gaps = 4/211 (1%)
Query: 37 KLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALK 96
KLG + D + +L++A++ G + S+ +VF+ VK+++ + A ++G ++N
Sbjct: 164 KLGVEYDVYVSTSLVTAYSKCGVLVSSNKVFENLRVKNVVTYNAFMSGLLQNGFHRVVFD 223
Query: 97 CFVKMR-STGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDM 155
F M + + +T+VSV+ A A + GK VHG ++ V ++L+DM
Sbjct: 224 VFKDMTMNLEEKPNKVTLVSVVSACATLSNIRLGKQVHGLSMKLEACD-HVMVVTSLVDM 282
Query: 156 YFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEF 215
Y KCG A VF R+++ W+ ++AG + ++ + A+ +F M+ + ++P+
Sbjct: 283 YSKCGCWGSAFDVFSR--SEKRNLITWNSMIAGMMMNSESERAVELFERMVDEGILPDSA 340
Query: 216 TLTSVLSACAHSGALDQGKLVHQYIECKKVS 246
T S++S A G + ++C V+
Sbjct: 341 TWNSLISGFAQKGVCVEAFKYFSKMQCAGVA 371