Miyakogusa Predicted Gene

Lj3g3v3500210.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3500210.1 CUFF.45873.1
         (244 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g074140.2 | hypothetical protein | HC | chr4:28196279-2819...   193   2e-49
Medtr4g074140.1 | hypothetical protein | HC | chr4:28196279-2819...   192   2e-49

>Medtr4g074140.2 | hypothetical protein | HC |
           chr4:28196279-28194568 | 20130731
          Length = 250

 Score =  193 bits (490), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 120/236 (50%), Positives = 151/236 (63%), Gaps = 11/236 (4%)

Query: 4   KRQLPSWM-----MQKVDASHVNKSENVAETNCSKEN--GDIVIENVTKKDQKKETSRSK 56
           KRQLPSWM     ++ +D      S  + + + S E+  G++V  +V K D+KKET + K
Sbjct: 14  KRQLPSWMKKPVGVRVIDGIAYGPSSMMPKVDASHESDSGNVVAADVKKIDRKKETIKRK 73

Query: 57  SNLNARREVKRRRNLDQQD--GSDDNVTQKKKKRKGNRSRDRVLRSLKKKDQNLEDLSHG 114
           SN +A+ EVK ++ LDQQ+  G  D    +KKK+K  +S+DR  R   KK  NLEDLS G
Sbjct: 74  SNSSAKGEVKGKKKLDQQNEMGEGDGDVNEKKKKKAIKSKDRAPRCSIKKRGNLEDLSRG 133

Query: 115 NDDDDVYRVQVSDDDDMELTVEDLVAIAEQYVKDHESKERQE-ASKQCESNWQFSASTET 173
             DD V  VQ+S D DMELTVEDL+AIAEQYVKD E KE QE +S+QCE  WQF A+ E 
Sbjct: 134 GSDD-VCPVQLSSDYDMELTVEDLMAIAEQYVKDCEDKELQETSSRQCEPKWQFPATAEA 192

Query: 174 GTTRGALCXXXXXXXXXXXXLYNSAPTTGELIGTSSSYTDHPALDMLDVFLGPLFR 229
           GTT  +L             LYNS+PTTG++I TS+S   HPA DMLDVFLGPL R
Sbjct: 193 GTTLDSLRENKKPSSSVREALYNSSPTTGDVIPTSTSQIGHPAQDMLDVFLGPLLR 248


>Medtr4g074140.1 | hypothetical protein | HC |
           chr4:28196279-28194568 | 20130731
          Length = 245

 Score =  192 bits (489), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 121/236 (51%), Positives = 150/236 (63%), Gaps = 11/236 (4%)

Query: 4   KRQLPSWMMQKV-----DASHVNKSENVAETNCSKEN--GDIVIENVTKKDQKKETSRSK 56
           KRQLPSWM + V     D      S  + + + S E+  G++V  +V K D+KKET + K
Sbjct: 9   KRQLPSWMKKPVGVRVIDGIAYGPSSMMPKVDASHESDSGNVVAADVKKIDRKKETIKRK 68

Query: 57  SNLNARREVKRRRNLDQQD--GSDDNVTQKKKKRKGNRSRDRVLRSLKKKDQNLEDLSHG 114
           SN +A+ EVK ++ LDQQ+  G  D    +KKK+K  +S+DR  R   KK  NLEDLS G
Sbjct: 69  SNSSAKGEVKGKKKLDQQNEMGEGDGDVNEKKKKKAIKSKDRAPRCSIKKRGNLEDLSRG 128

Query: 115 NDDDDVYRVQVSDDDDMELTVEDLVAIAEQYVKDHESKERQE-ASKQCESNWQFSASTET 173
             DD V  VQ+S D DMELTVEDL+AIAEQYVKD E KE QE +S+QCE  WQF A+ E 
Sbjct: 129 GSDD-VCPVQLSSDYDMELTVEDLMAIAEQYVKDCEDKELQETSSRQCEPKWQFPATAEA 187

Query: 174 GTTRGALCXXXXXXXXXXXXLYNSAPTTGELIGTSSSYTDHPALDMLDVFLGPLFR 229
           GTT  +L             LYNS+PTTG++I TS+S   HPA DMLDVFLGPL R
Sbjct: 188 GTTLDSLRENKKPSSSVREALYNSSPTTGDVIPTSTSQIGHPAQDMLDVFLGPLLR 243