Miyakogusa Predicted Gene

Lj3g3v3386850.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3386850.1 Non Characterized Hit- tr|I3T5A2|I3T5A2_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,100,0,NAD(P)-binding Rossmann-fold domains,NULL; SUGAR NUCLEOTIDE
EPIMERASE RELATED,Sugar nucleotide
epime,NODE_61353_length_911_cov_39.684963.path1.1
         (122 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g072040.1 | NAD(P)-binding rossmann-fold protein | HC | ch...   231   1e-61
Medtr4g072040.2 | NAD(P)-binding rossmann-fold protein | HC | ch...   172   4e-44

>Medtr4g072040.1 | NAD(P)-binding rossmann-fold protein | HC |
           chr4:27326323-27320921 | 20130731
          Length = 350

 Score =  231 bits (589), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 109/122 (89%), Positives = 116/122 (95%)

Query: 1   MIPLFKMFAGGPLGSGNQWFSWIHLDDIVDLIYEALRNPSYKGVINGTAPNPVRFAELCV 60
           MIPLF MFAGGPLGSGNQWFSWIHLDDIV+LIYEAL NPSYKGVINGTAPNPVR +ELC 
Sbjct: 229 MIPLFMMFAGGPLGSGNQWFSWIHLDDIVNLIYEALSNPSYKGVINGTAPNPVRLSELCE 288

Query: 61  QLGHVMGRPSWLPVPDIALKAVLGEGAAVVLEGQKVLPTQAKKLGFAFKYSYVKDALKAI 120
           QLG+V+GRPSWLPVPD ALKAVLGEGA VVLEGQKV+PTQAKKLGF+FKYSYVKDALKAI
Sbjct: 289 QLGNVLGRPSWLPVPDFALKAVLGEGATVVLEGQKVVPTQAKKLGFSFKYSYVKDALKAI 348

Query: 121 LS 122
           +S
Sbjct: 349 IS 350


>Medtr4g072040.2 | NAD(P)-binding rossmann-fold protein | HC |
           chr4:27326323-27320921 | 20130731
          Length = 333

 Score =  172 bits (437), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 80/90 (88%), Positives = 84/90 (93%)

Query: 1   MIPLFKMFAGGPLGSGNQWFSWIHLDDIVDLIYEALRNPSYKGVINGTAPNPVRFAELCV 60
           MIPLF MFAGGPLGSGNQWFSWIHLDDIV+LIYEAL NPSYKGVINGTAPNPVR +ELC 
Sbjct: 229 MIPLFMMFAGGPLGSGNQWFSWIHLDDIVNLIYEALSNPSYKGVINGTAPNPVRLSELCE 288

Query: 61  QLGHVMGRPSWLPVPDIALKAVLGEGAAVV 90
           QLG+V+GRPSWLPVPD ALKAVLGEGA VV
Sbjct: 289 QLGNVLGRPSWLPVPDFALKAVLGEGATVV 318