Miyakogusa Predicted Gene

Lj3g3v3386740.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3386740.1 tr|C1MIJ3|C1MIJ3_MICPC Predicted protein
(Fragment) OS=Micromonas pusilla (strain CCMP1545)
GN=MICPU,52.13,2e-19,SUBFAMILY NOT NAMED,NULL; NADH-UBIQUINONE
OXIDOREDUCTASE B22 SUBUNIT,NULL; Complex1_LYR,Complex 1
LY,CUFF.45788.1
         (114 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g117550.1 | NADH ubiquinone oxidoreductase B22-like subuni...   210   3e-55

>Medtr3g117550.1 | NADH ubiquinone oxidoreductase B22-like subunit |
           HC | chr3:55042637-55047135 | 20130731
          Length = 117

 Score =  210 bits (534), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 99/114 (86%), Positives = 106/114 (92%)

Query: 1   MSVTAYFARRAAQKERVRILYRRALKDTLNWAVHRHLFYDDAANLRDRFEQNKHVEDLDT 60
            S  AY ARRAAQ+E+VRILYRRALKDTLNWAVHRHLFYDDA+NLRDRFEQNKHVEDLDT
Sbjct: 4   TSTVAYVARRAAQREKVRILYRRALKDTLNWAVHRHLFYDDASNLRDRFEQNKHVEDLDT 63

Query: 61  IDRLIDDAEAHYNKFRHPDPYIVPWAPGGSKFCRNPAPPPGIEIVYNYGREDND 114
           IDRLI DAEA YNK+RHPDPYIVPWAPGGSKF RNPAPP GIEI+Y+YGREDN+
Sbjct: 64  IDRLIADAEASYNKWRHPDPYIVPWAPGGSKFTRNPAPPQGIEIIYDYGREDNN 117