Miyakogusa Predicted Gene

Lj3g3v3375900.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3375900.1 Non Characterized Hit- tr|B9RGE1|B9RGE1_RICCO
Putative uncharacterized protein OS=Ricinus communis G,43.21,3e-19,
,GO024595.path2.1
         (180 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g071010.1 | transmembrane protein, putative | HC | chr4:26...   146   1e-35
Medtr4g071010.4 | transmembrane protein, putative | HC | chr4:26...   144   6e-35
Medtr4g071010.3 | transmembrane protein, putative | HC | chr4:26...   144   6e-35
Medtr4g071010.2 | transmembrane protein, putative | HC | chr4:26...   144   7e-35

>Medtr4g071010.1 | transmembrane protein, putative | HC |
           chr4:26746895-26750545 | 20130731
          Length = 442

 Score =  146 bits (368), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 92/155 (59%), Positives = 107/155 (69%), Gaps = 21/155 (13%)

Query: 33  PSSTTTFKLCCALS-SNNAESSEPTSPEAQ-TGPVDPVKLAFNKAKTYKEESGKSNPGSG 90
           P++  T KLCC ++  NN ESSE  S EA+ T  VDP+KLAFNKAK YKE S KSN   G
Sbjct: 24  PTALKTTKLCCVMNKENNKESSEVNSIEAEKTASVDPIKLAFNKAKAYKE-SIKSNTDLG 82

Query: 91  IEQSDANGENSVNQGDAVDGRQKDLPVSLKIAMEKAKKYKQNKGVAIAETTQGLQGGRER 150
           IEQ+ A            DG +KD+ VS+KIAMEKAKKYKQNKGVA++ET QGLQGG E 
Sbjct: 83  IEQNSA------------DGGKKDVSVSVKIAMEKAKKYKQNKGVAVSETDQGLQGGSES 130

Query: 151 TL-----ENSVGEKEGKLSVSKIDFVGLDFGDKKK 180
           T      +NSV  K+G+LSVSKIDFVGL F D KK
Sbjct: 131 TWGENVNDNSVS-KKGELSVSKIDFVGLGFADNKK 164


>Medtr4g071010.4 | transmembrane protein, putative | HC |
           chr4:26746895-26749427 | 20130731
          Length = 322

 Score =  144 bits (362), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 90/154 (58%), Positives = 106/154 (68%), Gaps = 19/154 (12%)

Query: 33  PSSTTTFKLCCALS-SNNAESSEPTSPEAQ-TGPVDPVKLAFNKAKTYKEESGKSNPGSG 90
           P++  T KLCC ++  NN ESSE  S EA+ T  VDP+KLAFNKAK YKE S KSN   G
Sbjct: 24  PTALKTTKLCCVMNKENNKESSEVNSIEAEKTASVDPIKLAFNKAKAYKE-SIKSNTDLG 82

Query: 91  IEQSDANGENSVNQGDAVDGRQKDLPVSLKIAMEKAKKYKQNKGVAIAETTQGLQGGRER 150
           IEQ+ A            DG +KD+ VS+KIAMEKAKKYKQNKGVA++ET QGLQGG E 
Sbjct: 83  IEQNSA------------DGGKKDVSVSVKIAMEKAKKYKQNKGVAVSETDQGLQGGSES 130

Query: 151 TLENSVGE----KEGKLSVSKIDFVGLDFGDKKK 180
           T   +V +    K+G+LSVSKIDFVGL F D KK
Sbjct: 131 TWGENVNDNSVSKKGELSVSKIDFVGLGFADNKK 164


>Medtr4g071010.3 | transmembrane protein, putative | HC |
           chr4:26746895-26750545 | 20130731
          Length = 322

 Score =  144 bits (362), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 90/154 (58%), Positives = 106/154 (68%), Gaps = 19/154 (12%)

Query: 33  PSSTTTFKLCCALS-SNNAESSEPTSPEAQ-TGPVDPVKLAFNKAKTYKEESGKSNPGSG 90
           P++  T KLCC ++  NN ESSE  S EA+ T  VDP+KLAFNKAK YKE S KSN   G
Sbjct: 24  PTALKTTKLCCVMNKENNKESSEVNSIEAEKTASVDPIKLAFNKAKAYKE-SIKSNTDLG 82

Query: 91  IEQSDANGENSVNQGDAVDGRQKDLPVSLKIAMEKAKKYKQNKGVAIAETTQGLQGGRER 150
           IEQ+ A            DG +KD+ VS+KIAMEKAKKYKQNKGVA++ET QGLQGG E 
Sbjct: 83  IEQNSA------------DGGKKDVSVSVKIAMEKAKKYKQNKGVAVSETDQGLQGGSES 130

Query: 151 TLENSVGE----KEGKLSVSKIDFVGLDFGDKKK 180
           T   +V +    K+G+LSVSKIDFVGL F D KK
Sbjct: 131 TWGENVNDNSVSKKGELSVSKIDFVGLGFADNKK 164


>Medtr4g071010.2 | transmembrane protein, putative | HC |
           chr4:26746895-26750545 | 20130731
          Length = 321

 Score =  144 bits (362), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 90/154 (58%), Positives = 106/154 (68%), Gaps = 19/154 (12%)

Query: 33  PSSTTTFKLCCALS-SNNAESSEPTSPEAQ-TGPVDPVKLAFNKAKTYKEESGKSNPGSG 90
           P++  T KLCC ++  NN ESSE  S EA+ T  VDP+KLAFNKAK YKE S KSN   G
Sbjct: 24  PTALKTTKLCCVMNKENNKESSEVNSIEAEKTASVDPIKLAFNKAKAYKE-SIKSNTDLG 82

Query: 91  IEQSDANGENSVNQGDAVDGRQKDLPVSLKIAMEKAKKYKQNKGVAIAETTQGLQGGRER 150
           IEQ+ A            DG +KD+ VS+KIAMEKAKKYKQNKGVA++ET QGLQGG E 
Sbjct: 83  IEQNSA------------DGGKKDVSVSVKIAMEKAKKYKQNKGVAVSETDQGLQGGSES 130

Query: 151 TLENSVGE----KEGKLSVSKIDFVGLDFGDKKK 180
           T   +V +    K+G+LSVSKIDFVGL F D KK
Sbjct: 131 TWGENVNDNSVSKKGELSVSKIDFVGLGFADNKK 164