Miyakogusa Predicted Gene

Lj3g3v3375790.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3375790.1 Non Characterized Hit- tr|I3SMY5|I3SMY5_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,98.73,0,seg,NULL;
NAC_AB,Nascent polypeptide-associated complex NAC; NAC,Nascent
polypeptide-associated comp,CUFF.45757.1
         (157 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g071000.1 | BTF3b-like transcription factor | HC | chr4:26...   253   5e-68
Medtr3g020660.1 | BTF3b-like transcription factor | HC | chr3:59...   251   2e-67
Medtr3g020520.1 | NB-ARC domain protein | LC | chr3:5932433-5928...   213   4e-56
Medtr3g020640.1 | disease resistance protein (TIR-NBS-LRR class)...   195   1e-50
Medtr3g020650.1 | disease resistance protein (TIR-NBS-LRR class)...   138   2e-33

>Medtr4g071000.1 | BTF3b-like transcription factor | HC |
           chr4:26746695-26743824 | 20130731
          Length = 160

 Score =  253 bits (646), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 127/151 (84%), Positives = 130/151 (86%), Gaps = 1/151 (0%)

Query: 1   MKMAGSXXXXXXXXXXXXXXAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDDVVI 60
           MKMAGS              AVHKTTTTDDKRLQSTLKRIGVNAIP IEEVNIFKDDVVI
Sbjct: 7   MKMAGSVRTGGKGTVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPQIEEVNIFKDDVVI 66

Query: 61  QFLNPKVQASIAANTWVVSGAPQTKKLQDILPSIIHQLGPDNLENLKKLAEQFQKQAPEA 120
           QFLNPKVQASIAANTWVVSGAPQTKKLQDILPSIIHQLGPDNLENLKK+AEQFQKQAPEA
Sbjct: 67  QFLNPKVQASIAANTWVVSGAPQTKKLQDILPSIIHQLGPDNLENLKKIAEQFQKQAPEA 126

Query: 121 GAADSTAAQEENDDDVPELVPGETFETVAEE 151
           G   +T  QEENDDDVP+LVPGETFET AEE
Sbjct: 127 GTGSAT-VQEENDDDVPDLVPGETFETAAEE 156


>Medtr3g020660.1 | BTF3b-like transcription factor | HC |
           chr3:5988982-5985577 | 20130731
          Length = 159

 Score =  251 bits (640), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 129/155 (83%), Positives = 135/155 (87%), Gaps = 2/155 (1%)

Query: 1   MKMAGSXXXXXXXXXXXXXXAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDDVVI 60
           MKMAGS              AVHKT TTDDKRLQSTLKRIGVN IPAIEEVNIFKDDVVI
Sbjct: 7   MKMAGSVRTGGKGTVRRKKKAVHKTATTDDKRLQSTLKRIGVNGIPAIEEVNIFKDDVVI 66

Query: 61  QFLNPKVQASIAANTWVVSGAPQTKKLQDILPSIIHQLGPDNLENLKKLAEQFQKQAPEA 120
           QFLNPKVQASIAANTWVVSG+PQTKKLQDILP+IIHQLGPDNLENLKKLAEQFQKQAPEA
Sbjct: 67  QFLNPKVQASIAANTWVVSGSPQTKKLQDILPNIIHQLGPDNLENLKKLAEQFQKQAPEA 126

Query: 121 GAADSTAAQEENDDDVPELVPGETFETVAEEETKA 155
           G AD+TAAQE++DD VP+LVPGETFET A EETKA
Sbjct: 127 G-ADATAAQEDDDDAVPDLVPGETFETAA-EETKA 159


>Medtr3g020520.1 | NB-ARC domain protein | LC | chr3:5932433-5928136
           | 20130731
          Length = 526

 Score =  213 bits (543), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 107/122 (87%), Positives = 117/122 (95%), Gaps = 2/122 (1%)

Query: 34  QSTLKRIGVNAIPAIEEVNIFKDDVVIQFLNPKVQASIAANTWVVSGAPQTKKLQDILPS 93
           ++TLKRIGVN+IPAIEEVNIFKDDVVIQFL PKVQA+IAANTWVVSG+PQTKKLQDILP+
Sbjct: 407 KNTLKRIGVNSIPAIEEVNIFKDDVVIQFLYPKVQAAIAANTWVVSGSPQTKKLQDILPN 466

Query: 94  IIHQLGPDNLENLKKLAEQFQKQAPEAGAADSTAAQEENDDDVPELVPGETFETVAEEET 153
           IIHQLGPDNLENLKKLAEQFQKQAPEAG AD+TAAQE++DD VP+LVPGETFET A EET
Sbjct: 467 IIHQLGPDNLENLKKLAEQFQKQAPEAG-ADATAAQEDDDDAVPDLVPGETFETAA-EET 524

Query: 154 KA 155
           KA
Sbjct: 525 KA 526


>Medtr3g020640.1 | disease resistance protein (TIR-NBS-LRR class),
            putative | LC | chr3:5978502-5973054 | 20130731
          Length = 1131

 Score =  195 bits (496), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 103/135 (76%), Positives = 112/135 (82%), Gaps = 9/135 (6%)

Query: 21   AVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDDVVIQFLNPKVQASIAANTWVVSG 80
            AVHKT TTDDKRLQSTLKRIGVN IPA       K  + ++     VQASIAANTWVVS 
Sbjct: 1006 AVHKTATTDDKRLQSTLKRIGVNGIPA-------KVKLTVELELVAVQASIAANTWVVSS 1058

Query: 81   APQTKKLQDILPSIIHQLGPDNLENLKKLAEQFQKQAPEAGAADSTAAQEENDDDVPELV 140
            +PQTKKLQDILP+IIHQLGPDNLEN KKLAEQFQKQAPEAG AD+TAAQE++DD VP+LV
Sbjct: 1059 SPQTKKLQDILPNIIHQLGPDNLENQKKLAEQFQKQAPEAG-ADATAAQEDDDDAVPDLV 1117

Query: 141  PGETFETVAEEETKA 155
            PGETFET A EETKA
Sbjct: 1118 PGETFETAA-EETKA 1131


>Medtr3g020650.1 | disease resistance protein (TIR-NBS-LRR class),
            putative | LC | chr3:5984347-5979088 | 20130731
          Length = 1185

 Score =  138 bits (348), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 67/85 (78%), Positives = 73/85 (85%)

Query: 32   RLQSTLKRIGVNAIPAIEEVNIFKDDVVIQFLNPKVQASIAANTWVVSGAPQTKKLQDIL 91
            R Q T K    N IPAIEEVNIFKDDVVIQ+LNPKVQASIA +TWVVSG+PQTKKLQ IL
Sbjct: 1028 RRQKTSKHSEENGIPAIEEVNIFKDDVVIQYLNPKVQASIATSTWVVSGSPQTKKLQYIL 1087

Query: 92   PSIIHQLGPDNLENLKKLAEQFQKQ 116
             +IIHQ GPDNLE+LKKLA+QFQKQ
Sbjct: 1088 HNIIHQFGPDNLESLKKLAKQFQKQ 1112