Miyakogusa Predicted Gene

Lj3g3v3374660.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3374660.2 tr|D8QZF9|D8QZF9_SELML Ubiquitin-protein ligase,
PUB43 OS=Selaginella moellendorffii GN=PUB43-2 PE=4,29.52,3e-18,ARM
repeat,Armadillo-type fold; no description,Armadillo-like helical;
seg,NULL; PUTATIVE ARM REPEAT,CUFF.45730.2
         (386 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g019360.1 | plant U-box protein, putative | HC | chr3:5430...   497   e-140
Medtr8g027140.1 | spotted leaf protein, putative | HC | chr8:953...   144   2e-34
Medtr7g117890.1 | spotted leaf protein, putative | HC | chr7:489...   120   3e-27
Medtr1g076400.1 | E3 ubiquitin ligase PUB14, putative | HC | chr...    95   9e-20
Medtr1g076400.2 | E3 ubiquitin ligase PUB14, putative | HC | chr...    95   9e-20
Medtr3g115670.1 | senescence-associated E3 ubiquitin ligase | HC...    88   1e-17

>Medtr3g019360.1 | plant U-box protein, putative | HC |
           chr3:5430118-5433301 | 20130731
          Length = 827

 Score =  497 bits (1279), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 265/388 (68%), Positives = 314/388 (80%), Gaps = 4/388 (1%)

Query: 1   MFNSGKLEXXXXXXXXXXXXXXXTENVQRLVKTGIVGYLLQLLFSVTSVLMTLREPASAM 60
           MF +GKLE               TENVQRL+++GI G LLQLLFSVTSVLMTLREPASA+
Sbjct: 381 MFITGKLESKLSSLNALQNLSSLTENVQRLIRSGITGSLLQLLFSVTSVLMTLREPASAI 440

Query: 61  LARIAQSESFLVNQDAAQQMLTLLSLNNSKVIQGHLLEALDSIASHPGASKVRRKMKEKG 120
           LARIAQSES LVN+D AQQML+LL+L+ S +IQGHLLEAL+S++SH GASKVRRKMKEKG
Sbjct: 441 LARIAQSESILVNEDVAQQMLSLLNLS-SPIIQGHLLEALNSMSSHLGASKVRRKMKEKG 499

Query: 121 ALQLILPLLKET--KIRSKALSLLYTLSKDLTEEFSEHLDQTHLLNIVNIVISTTSDNEK 178
           ALQL+LP LKE   KIR K L+LLYTLSKD+T+E +E+LD++H+ NIVNIV S+TSD+EK
Sbjct: 500 ALQLLLPFLKENNIKIRCKVLNLLYTLSKDMTDELTEYLDESHIFNIVNIVSSSTSDSEK 559

Query: 179 ANAVGILSNLPVNDKKVTDMLKRANLLPMLVHIMDSSTGSNSLTRSIIAESIAGIVIRFT 238
           A AVGILSNLP +DKKVTD+LKRA+LL +L+ I+ SS  S S + + + E+  G++ RFT
Sbjct: 560 AAAVGILSNLPASDKKVTDILKRASLLQLLISILYSSNASKSPSTNNLIENATGVINRFT 619

Query: 239 CASDKKLQLLSAEQGVIPLLVKVLSGGSTITKFRAATSLAQLSQNSLPLRRSWKSRWLCA 298
            +SDKKLQL+S + GVIPLLVK+LS  S ITK RAA SLAQLSQNSL LR+  KSRWLC 
Sbjct: 620 NSSDKKLQLVSVQHGVIPLLVKLLSTSSPITKSRAANSLAQLSQNSLSLRKCRKSRWLCV 679

Query: 299 SHSVNNAYCEVHDGYCFVNSTFCLIKAGAVSPLIQILVDKDEEAVEASLSALSTLLQDEI 358
             S  NAYCEVHDGYCFVNSTFCL+KAGAVS LI++L DK++EAVEASL ALSTLLQDEI
Sbjct: 680 QPST-NAYCEVHDGYCFVNSTFCLVKAGAVSQLIEMLEDKEKEAVEASLVALSTLLQDEI 738

Query: 359 WEGGVKCIAELSGVDPIVKILETGNLKV 386
           WE GV  IA+LSGV  I+K LE G+ KV
Sbjct: 739 WENGVNFIAKLSGVQAIIKSLEVGDAKV 766


>Medtr8g027140.1 | spotted leaf protein, putative | HC |
           chr8:9532608-9537848 | 20130731
          Length = 1006

 Score =  144 bits (362), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 110/369 (29%), Positives = 194/369 (52%), Gaps = 17/369 (4%)

Query: 30  LVKTGIVGYLLQLLFSVTSVLMTLREPASAMLARIAQSES---------FLVNQDAAQQM 80
           +++ G V  LL LL+  +    +L E  +A++ ++A S            L + D    +
Sbjct: 578 MIRQGAVRPLLDLLYHHSIHTSSLWEDVAAIIMQLAASTISQDIQTPVLLLDSDDDVFNL 637

Query: 81  LTLLSLNNSKVIQGHLLEALDSIASHPGASKVRRKMKEKGALQLILPLLKETKI--RSKA 138
             L+S+    V Q ++++   ++   P +S ++ K+ E  A+  ++ L +   +  R+ A
Sbjct: 638 FPLISVTQPGV-QQNIIQTFYALCQSPSSSNIKTKLNECSAIPELVRLCESENLNLRASA 696

Query: 139 LSLLYTLSKDLTEEF-SEHLDQTHLLNIVNIVISTTSDNEKANAVGILSNLPVNDKKVTD 197
           + L   L +   E    EH+DQ  +  ++ I+ S++ D E  +A+GI+ +LP  D+ +T 
Sbjct: 697 IKLFSCLVESCDESIIVEHVDQKCINTLLQILQSSSDDEEILSAMGIICHLPEIDQ-ITQ 755

Query: 198 MLKRANLLPMLVHIMDSSTGSNSLTRSIIAESIAGIVIRFTCASDKKLQLLSAEQGVIPL 257
            +  A +LP++   +      + L RS + E   G + RFT  +  + Q + AE G+I +
Sbjct: 756 WILDAGVLPIIYKYVQDGRDRD-LQRSNLVEKAVGALRRFTVPTHLEWQKIVAETGIITV 814

Query: 258 LVKVLSGGSTITKFRAATSLAQLSQNSLPLRRSWKSR--WLCASHSVNNAYCEVHDGYCF 315
           LV++L  GST+TK  AA  LA+ S++S+ L R    +   LC   + +   C+VH G C 
Sbjct: 815 LVQLLESGSTLTKQSAALCLAEFSKSSVSLSRPIPKQKGLLCCFSAPSEIGCKVHGGVCT 874

Query: 316 VNSTFCLIKAGAVSPLIQILVDKDEEAVEASLSALSTLLQDEIWEGGVKCIAELSGVDPI 375
           V S+FCL+ A A+ PL + L + D    EASL AL TL++ E  E G K +A+ + +  I
Sbjct: 875 VKSSFCLLAAEAIGPLTRNLGESDYGVCEASLDALLTLIEGEKLESGGKVLAKANAIPLI 934

Query: 376 VKILETGNL 384
           +K L + +L
Sbjct: 935 IKFLSSTSL 943


>Medtr7g117890.1 | spotted leaf protein, putative | HC |
           chr7:48925656-48919484 | 20130731
          Length = 1001

 Score =  120 bits (300), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 102/375 (27%), Positives = 194/375 (51%), Gaps = 30/375 (8%)

Query: 25  ENVQRLVKTGIVGYLLQLLFSVTSVLMTLREPASAMLARIAQSESFLVNQD--------- 75
           +N   +++ G    L  +LF  +    +L E  + ++ ++A S    ++QD         
Sbjct: 569 KNGLEMIQQGAARKLFGILFQHSLPSSSLSEHVAPIIMQLAAS---TISQDTQTPVSLLE 625

Query: 76  AAQQMLTLLSLNNSKV--IQGHLLEALDSIASHPGASKVRRKMKEKGALQLILPLLKETK 133
           + + +  L SL +  V  ++ ++++   S+   P AS +R K++E  ++ +++ L +   
Sbjct: 626 SDEDVFNLFSLVSYTVPDVRQYIIQTFYSLCHSPSASYIRNKLRECPSVLVLVKLFENES 685

Query: 134 I--RSKALSLLYTLSKDLTEE-FSEHLDQTHLLNIVNIVISTTSDNEKANAVGILSNLPV 190
           +  R+ A+ L   L +   E+   +H++Q  +  ++ ++ S++   E  +A+GI+  LP 
Sbjct: 686 LSLRASAVKLFSCLVESCDEDAILKHVNQKCIETLLQMLKSSSDKEEIVSAMGIIRYLP- 744

Query: 191 NDKKVTDMLKRANLLPMLVHIMDSSTGSNSLTRSIIAESIAGIVIRFTCASDKKLQLLSA 250
             +++T  L  A  L ++   +   T  + L +S + E+ AG + RFT  ++ + Q  +A
Sbjct: 745 KVQQITQWLYDAGALSIICKYVQDGTDKD-LQKSKLVENSAGALCRFTVPTNLEWQKSAA 803

Query: 251 EQGVIPLLVKVLSGGSTITKFRAATSLAQLSQNS------LPLRRSWKSRWLCASHSVNN 304
           E G+I +LV++L  G+  TK  AA SL Q S++S      +P R+ +   W  ++ +   
Sbjct: 804 EIGIITVLVQLLESGTAQTKQLAALSLTQFSKSSNELSSPMPKRKGF---WCFSAQT--E 858

Query: 305 AYCEVHDGYCFVNSTFCLIKAGAVSPLIQILVDKDEEAVEASLSALSTLLQDEIWEGGVK 364
           A C VH G C V S+FCL++A AV  L + L D D    E SL AL TL+  E  + G K
Sbjct: 859 AGCLVHGGVCIVESSFCLLEADAVGALAKTLGDSDLGVCENSLDALLTLIDGEKLQSGSK 918

Query: 365 CIAELSGVDPIVKIL 379
            +A+ + +  I++ L
Sbjct: 919 VLADENVIPLIIRFL 933


>Medtr1g076400.1 | E3 ubiquitin ligase PUB14, putative | HC |
           chr1:34032730-34037383 | 20130731
          Length = 1013

 Score = 95.1 bits (235), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 78/277 (28%), Positives = 141/277 (50%), Gaps = 14/277 (5%)

Query: 112 VRRKMKEKGALQLILPLLKET--KIRSKALSLLYTLSKDLTEEFSEHLDQTHLLN-IVNI 168
           V++ +     + LILPLL ++  ++R  A++LL+  S+   E   E+L +   L  ++  
Sbjct: 673 VKKAILAANGVSLILPLLDDSDSEVRETAINLLFLFSQHEPEGVVEYLFKPRRLEALIGF 732

Query: 169 VISTTSDNEKANAVGILSNLPVNDKKVTDMLKRANLLPMLVHIMDSSTGSNSLTRSIIAE 228
           + +  +DN +  A G+L+NLP +++++T  L     L  ++ I+   TG     +    E
Sbjct: 733 LENDDNDNVQMAAAGLLANLPKSERELTTKLIEMGGLDAIISIL--KTG-----KMEAKE 785

Query: 229 SIAGIVIRFTCASDKKLQLLSAEQGVIPLLVKVLSGGSTITKFRAATSLAQLSQNSLPLR 288
           +    + RFT  ++ + Q    ++G+ PLLV  L+ GS   K  AA  +  LS ++  L 
Sbjct: 786 NALSALFRFTDPTNIESQRDLVKRGIYPLLVDFLNTGSVTAKAIAAAFIGDLSMSTPKLT 845

Query: 289 RSWKSR--WLCASHSVNNAYCEVHDGYCFVNSTFCLIKAGAVSPLIQILVDKDEEAVEAS 346
              K    W   S  V    C  HD  C V +TFCL++A A+  LI++L  +       +
Sbjct: 846 VISKPNGCWFFKSSRV--PLCAAHDSVCSVTTTFCLLEANALPGLIKLLHGEVHATAYEA 903

Query: 347 LSALSTLLQDEIWEGGVKCIAELSGVDPIVKILETGN 383
           +  LSTL+ +E  + G + + E + + P+++IL  G+
Sbjct: 904 IQTLSTLVLEEHPQRGARLLHEKNAMRPLLEILTWGS 940


>Medtr1g076400.2 | E3 ubiquitin ligase PUB14, putative | HC |
           chr1:34032751-34037233 | 20130731
          Length = 1013

 Score = 95.1 bits (235), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 78/277 (28%), Positives = 141/277 (50%), Gaps = 14/277 (5%)

Query: 112 VRRKMKEKGALQLILPLLKET--KIRSKALSLLYTLSKDLTEEFSEHLDQTHLLN-IVNI 168
           V++ +     + LILPLL ++  ++R  A++LL+  S+   E   E+L +   L  ++  
Sbjct: 673 VKKAILAANGVSLILPLLDDSDSEVRETAINLLFLFSQHEPEGVVEYLFKPRRLEALIGF 732

Query: 169 VISTTSDNEKANAVGILSNLPVNDKKVTDMLKRANLLPMLVHIMDSSTGSNSLTRSIIAE 228
           + +  +DN +  A G+L+NLP +++++T  L     L  ++ I+   TG     +    E
Sbjct: 733 LENDDNDNVQMAAAGLLANLPKSERELTTKLIEMGGLDAIISIL--KTG-----KMEAKE 785

Query: 229 SIAGIVIRFTCASDKKLQLLSAEQGVIPLLVKVLSGGSTITKFRAATSLAQLSQNSLPLR 288
           +    + RFT  ++ + Q    ++G+ PLLV  L+ GS   K  AA  +  LS ++  L 
Sbjct: 786 NALSALFRFTDPTNIESQRDLVKRGIYPLLVDFLNTGSVTAKAIAAAFIGDLSMSTPKLT 845

Query: 289 RSWKSR--WLCASHSVNNAYCEVHDGYCFVNSTFCLIKAGAVSPLIQILVDKDEEAVEAS 346
              K    W   S  V    C  HD  C V +TFCL++A A+  LI++L  +       +
Sbjct: 846 VISKPNGCWFFKSSRV--PLCAAHDSVCSVTTTFCLLEANALPGLIKLLHGEVHATAYEA 903

Query: 347 LSALSTLLQDEIWEGGVKCIAELSGVDPIVKILETGN 383
           +  LSTL+ +E  + G + + E + + P+++IL  G+
Sbjct: 904 IQTLSTLVLEEHPQRGARLLHEKNAMRPLLEILTWGS 940


>Medtr3g115670.1 | senescence-associated E3 ubiquitin ligase | HC |
           chr3:54144015-54148676 | 20130731
          Length = 814

 Score = 88.2 bits (217), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 109/397 (27%), Positives = 183/397 (46%), Gaps = 44/397 (11%)

Query: 30  LVKTGIVGYLLQLLFSVTSVLMT--LREPASAMLARIAQS-ESF-----------LVNQD 75
           L++ GI+  L+  LF+V   L+   L+E ++ +LA +  S E F           LV++D
Sbjct: 355 LIEAGILSPLVNDLFAVGPHLLPTRLKEVSATILASVVNSGEDFDSIPLGPDHQTLVSED 414

Query: 76  AAQQMLTLLSLNNSKVIQGHLLEALDSIASHPGAS-KVRRKMKEKGALQLILPLLK--ET 132
              ++L L+S N    I+  LL+ L  +AS P     +   +K  GA   ++  ++  + 
Sbjct: 415 IVHKLLHLIS-NTGPAIECKLLQVLVGLASSPTTVLSLVSAIKSSGATISLVQFIEAPQK 473

Query: 133 KIRSKALSLLYTLSKDLTEEFSEHLDQT-----HLLNIVNIVISTTSDNEKANAVGILSN 187
            +R  ++ LL  LS  +  E ++ L  +      L+ +++  I  T   E+A AVG+L++
Sbjct: 474 DLRLASIKLLQNLSPHMGPELADALRGSVGQLSSLVKVISENIGIT--EEQAAAVGLLAD 531

Query: 188 LPVNDKKVT-DMLKRANLLPMLVHIMDSSTGSNSLTRSIIA--ESIAGIVIRFT--CASD 242
           LP  D  +T  +L        +  ++    G    TR +    E +  IV R T   A +
Sbjct: 532 LPERDLGLTRQLLDEGAFFMAISKVIAIRQGEIRGTRFVTPFLEGLMKIVARITYVLADE 591

Query: 243 KKLQLLSAEQGVIPLLVKVL-SGGSTITKFRAATSLAQLSQNSLPLRR--SWKSRWLCAS 299
                L  +Q +  L +++L + G    +  +A +L  LS  S  L +         CAS
Sbjct: 592 PDAVALCRDQNLAALFIELLQTNGLDNVQMVSAIALENLSLESKNLTKLPEMPEPAFCAS 651

Query: 300 H-------SVNNAYCEVHDGYCFVNSTFCLIKAGAVSPLIQILVDKDEEAVEASLSALST 352
                    V    C +H G C +  TFCL +  AV  L+ +L   +   VEA+L+AL T
Sbjct: 652 FFSCFSKPPVITGLCRIHRGKCSLKETFCLYEGQAVLKLVALLDHTNVNVVEAALAALCT 711

Query: 353 LLQDEI-WEGGVKCIAELSGVDPIVKIL---ETGNLK 385
           ++ D +  E GV  + E  GV PI+ +L    T NL+
Sbjct: 712 VIDDGVDIEQGVMVLCEAEGVKPILDVLLEKRTDNLR 748