Miyakogusa Predicted Gene

Lj3g3v3363550.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3363550.1 Non Characterized Hit- tr|I1JSM1|I1JSM1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.20983
PE,49.58,6e-18,DUF4408,Domain of unknown function DUF4408,CUFF.45711.1
         (322 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g117050.1 | transmembrane protein, putative | HC | chr3:54...   111   9e-25
Medtr4g070660.1 | transmembrane protein, putative | LC | chr4:26...   105   6e-23
Medtr4g070640.1 | transmembrane protein, putative | LC | chr4:26...    95   9e-20
Medtr4g070630.1 | transmembrane protein, putative | HC | chr4:26...    72   8e-13
Medtr8g077085.1 | transmembrane protein, putative | HC | chr8:32...    62   1e-09

>Medtr3g117050.1 | transmembrane protein, putative | HC |
           chr3:54732271-54733982 | 20130731
          Length = 266

 Score =  111 bits (278), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 102/335 (30%), Positives = 158/335 (47%), Gaps = 101/335 (30%)

Query: 1   MDSFSFNNLQAGRANAILKHDKLRRITSLLRIIEVCVLVVLVSRFSMK-LPGSVRNTSEY 59
           M + + +  +A ++N + KH  LR I  + R  E+CV+++L+SR S + LP +++N+SEY
Sbjct: 1   MGTINLHKHKAEKSNKVQKHRHLRMIAKIFRYAEMCVVLILISRLSFQQLPLALKNSSEY 60

Query: 60  LREFSLFMNSPRFVFLIGNAIIITLFAQYGQFSAQGSAENVVQTEPDLYQEFLQKSTTKY 119
            R F++   SP FVFL+GN III L AQ G                     F Q  + K 
Sbjct: 61  FRGFAV---SPAFVFLVGNIIIIILIAQSGH--------------------FSQHDSAKR 97

Query: 120 REKQSIRTEEDIENRIINGEIEKSPENNENFSSIGESGYTMINGEINKFLENNEICESTV 179
           R      +E D+                          Y        +FL+N+ + +   
Sbjct: 98  RS-----SEHDL--------------------------YL-------EFLKNSNMYQKI- 118

Query: 180 ETGYGMKNQRIRTEDGVESKRIN-GEIENYPENKEIFPRTVETGYIIKSGKFDEGKIKWS 238
             G+  K   ++ E  V+ +RIN G +  + + + I                D+ K+K  
Sbjct: 119 -QGFDQKKPSVKVESNVKGRRINDGCMVKFSQKESIKSE-------------DDNKMKLE 164

Query: 239 EKQRTKTEEANFGLKVKKDYRRCETEV---------LSKPHHVLRRCETENG---RKSIE 286
           EKQ  KTE    GL+VK  YRRC++E+          +K   VL+RCE++N    RK+IE
Sbjct: 165 EKQEIKTE---MGLEVK-GYRRCQSEIELVRGVNSDDAKDQRVLQRCESDNDKSKRKNIE 220

Query: 287 ASP-------AEDEMSNEEFRRIVEAFIAKEQRIR 314
                      ED MS++EFRR VEAFIA+++++R
Sbjct: 221 VDKEKKWSLYPEDGMSSDEFRRTVEAFIARQRKLR 255


>Medtr4g070660.1 | transmembrane protein, putative | LC |
           chr4:26611919-26613213 | 20130731
          Length = 225

 Score =  105 bits (262), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 78/150 (52%), Positives = 104/150 (69%), Gaps = 17/150 (11%)

Query: 1   MDSFSFNNLQAGRANAILKHDKLRRITSLLRIIEVCVLVVLVSRFSMKLPGSVRNTSEYL 60
           M+SFSFN LQA +ANAILKH KL+R T+LLR++EVCV++VL+SR SMKLP  VRN+SEYL
Sbjct: 1   MESFSFN-LQAEKANAILKHHKLQRATTLLRLVEVCVVLVLISRLSMKLPIVVRNSSEYL 59

Query: 61  REFSLFMNSPRFVFLIGNAIIITLFAQYGQFSAQGSAENVV--QTEPDLYQEFLQKSTTK 118
           ++ S+F+NS  FVF+IGN IIITLF       AQG+ +N+   Q   D+Y++   KS  K
Sbjct: 60  KDISVFINSHYFVFVIGNIIIITLF-------AQGNGKNIPKEQEHDDIYEKLAGKS-IK 111

Query: 119 YREKQ------SIRTEEDIENRIINGEIEK 142
           + EK+      S +    IEN+ I+   EK
Sbjct: 112 HEEKERMIKYDSTKEGASIENKRIDDVEEK 141



 Score = 85.9 bits (211), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 66/167 (39%), Positives = 87/167 (52%), Gaps = 22/167 (13%)

Query: 159 TMINGEINKFLENNEICESTVETGYGMKNQRIRTEDGVESKRINGEIENYPENKEIFPRT 218
             IN     F+  N I  +    G G    + +  D +  K     I++  + + I   +
Sbjct: 64  VFINSHYFVFVIGNIIIITLFAQGNGKNIPKEQEHDDIYEKLAGKSIKHEEKERMIKYDS 123

Query: 219 VETGYIIKSGKFDEGKIKWSEKQRTKTEEANFGLKVKKDYRRCETEVLSKPHHVLRRCET 278
            + G  I++ + D+      EK +TKTE     LK    YRRCETE+L K   VL+RCE+
Sbjct: 124 TKEGASIENKRIDD----VEEKMKTKTE-----LKKGYCYRRCETEILKKRRRVLQRCES 174

Query: 279 EN-GRKSIEASPA------------EDEMSNEEFRRIVEAFIAKEQR 312
           EN GRK IEA+PA            EDEMSNEEFRR VEAFIAK+QR
Sbjct: 175 ENSGRKKIEAAPAASEEKMVRISYPEDEMSNEEFRRTVEAFIAKQQR 221


>Medtr4g070640.1 | transmembrane protein, putative | LC |
           chr4:26604409-26605641 | 20130731
          Length = 213

 Score = 95.1 bits (235), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 68/133 (51%), Positives = 93/133 (69%), Gaps = 11/133 (8%)

Query: 1   MDSFSFNNLQAGRANAILKHDKLRRITSLLRIIEVCVLVVLVSRFSMKLPGSVRNTSEYL 60
           M+SF FN LQ  +ANAILKH KL+R+T LLR++EVCV++VL+SR S+KL   VRN+SEYL
Sbjct: 1   MESFRFN-LQVEKANAILKHRKLQRVTILLRLVEVCVVLVLISRLSLKLLVVVRNSSEYL 59

Query: 61  REFSLFMNSPRFVFLIGNAIIITLFAQYGQFSAQGSAENVVQ--TEPDLYQEFLQKSTTK 118
           R+ S+ +NS  FVF+IGN IIITLF       AQGS +NV +     D+Y++ +  S   
Sbjct: 60  RDVSVIVNSHYFVFVIGNVIIITLF-------AQGSGKNVPKEHEHDDIYEKLVHNSVN- 111

Query: 119 YREKQSIRTEEDI 131
           + EK+ I  ++ I
Sbjct: 112 HEEKERIIKDDRI 124



 Score = 82.0 bits (201), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 63/167 (37%), Positives = 83/167 (49%), Gaps = 34/167 (20%)

Query: 159 TMINGEINKFLENNEICESTVETGYGMKNQRIRTEDGVESKRINGEIENYPENKEIFP-- 216
            ++N     F+  N I  +    G G    +    D +  K ++  + N+ E + I    
Sbjct: 64  VIVNSHYFVFVIGNVIIITLFAQGSGKNVPKEHEHDDIYEKLVHNSV-NHEEKERIIKDD 122

Query: 217 RTVETGYIIKSGKFDEGKIKWSEKQRTKTEEANFGLKVKKDYRRCETEVLSKPHHVLRRC 276
           R VE G     G  ++ K+K                +VKK YRRCET +L K   VL RC
Sbjct: 123 RIVEKG-----GSLEQHKMKR---------------EVKKSYRRCETNILKKRRRVLERC 162

Query: 277 ETENGRKSIEAS-PA----------EDEMSNEEFRRIVEAFIAKEQR 312
           E+EN RK IEA+ PA          EDEMSN+EFRRIVEAFIAK+QR
Sbjct: 163 ESENERKIIEAATPAEEEMLRISYPEDEMSNDEFRRIVEAFIAKQQR 209


>Medtr4g070630.1 | transmembrane protein, putative | HC |
           chr4:26596765-26597801 | 20130731
          Length = 169

 Score = 71.6 bits (174), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 42/85 (49%), Positives = 56/85 (65%), Gaps = 10/85 (11%)

Query: 47  MKLPGSVRNTSEYLREFSLFMNSPRFVFLIGNAIIITLFAQYGQFSAQGSAENVV--QTE 104
           MKLP  VRN+SEYL++F + +NS  FVFLIGN IIIT F       AQGS  NV   Q  
Sbjct: 1   MKLPVVVRNSSEYLKDFLVSINSHYFVFLIGNIIIITFF-------AQGSGRNVPNEQEY 53

Query: 105 PDLYQEFLQKSTTKYREKQSIRTEE 129
            D+Y++ ++KS  K+ EK+ IR ++
Sbjct: 54  DDVYEKLVRKS-IKHEEKEKIRKDD 77



 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/69 (57%), Positives = 46/69 (66%), Gaps = 13/69 (18%)

Query: 254 VKKDYRRCETEVLSKPHHVLRRCETE-NGRKSIEASPA------------EDEMSNEEFR 300
           VKK YRRCE+E L K H VL+RCE+E NGRK+IE +              ED+MSNEEF 
Sbjct: 95  VKKSYRRCESENLKKQHRVLQRCESENNGRKNIEPAHVVKEETIVRILYPEDKMSNEEFH 154

Query: 301 RIVEAFIAK 309
           R VEAFIAK
Sbjct: 155 RTVEAFIAK 163


>Medtr8g077085.1 | transmembrane protein, putative | HC |
          chr8:32733531-32732417 | 20130731
          Length = 240

 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 54/87 (62%), Gaps = 5/87 (5%)

Query: 13 RANAILKHDKLRRITSLLRIIEVCVLVVLVSRFSMKLPGSVRNTSEYLREFSLFMNSPRF 72
          + NAI  H     I+  +RI E+C++ +++S    +LP +V  ++EYLR+ +    +P F
Sbjct: 5  KPNAIRTH--FAAISKTIRIFELCIVFLILSWTLTRLPLAVSISAEYLRKLA---ANPLF 59

Query: 73 VFLIGNAIIITLFAQYGQFSAQGSAEN 99
          +F + NAII  LFAQ G+FS + S ++
Sbjct: 60 IFAVSNAIIAALFAQSGRFSDENSEDH 86