Miyakogusa Predicted Gene

Lj3g3v3363290.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3363290.1 tr|B0BLI0|B0BLI0_LOTJA CM0216.320.nc protein
OS=Lotus japonicus GN=CM0216.320.nc PE=4
SV=1,51.33,1e-18,DUF241,Protein of unknown function DUF241, plant;
coiled-coil,NULL; seg,NULL,CUFF.45694.1
         (157 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g070540.1 | DUF241 domain protein | HC | chr4:26570763-265...   118   2e-27
Medtr4g070530.1 | DUF241 domain protein | HC | chr4:26568025-265...   109   1e-24
Medtr3g116950.1 | DUF241 domain protein | HC | chr3:54700872-546...    69   3e-12
Medtr4g070570.1 | DUF241 domain protein | HC | chr4:26579627-265...    58   4e-09
Medtr3g116920.1 | DUF241 domain protein | HC | chr3:54688814-546...    56   1e-08
Medtr4g070590.1 | DUF241 domain protein | HC | chr4:26584199-265...    50   8e-07

>Medtr4g070540.1 | DUF241 domain protein | HC |
           chr4:26570763-26569729 | 20130731
          Length = 296

 Score =  118 bits (296), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 69/113 (61%), Positives = 77/113 (68%), Gaps = 3/113 (2%)

Query: 1   MRELQSIIRRE-GNEIGFAVEGRKYLALRKKMKKQMRKALENSKGMKNELIAXXXXXXXX 59
           M ELQS+IRR+ G E GF VEG KY+A RK MKKQ+RKAL N K MKNE I         
Sbjct: 115 MYELQSVIRRKRGIETGFTVEGVKYMAFRKNMKKQIRKALVNLKTMKNESIDSSSNKDNN 174

Query: 60  XXPMFGFLKEAEAEADPLSSLECVLLFISEAKGLSRNRRWSEISKLMLPKRAV 112
             PMFG LKEAEA    L SLE +LLFIS+ KG S++ RWS ISKLM  KRAV
Sbjct: 175 SSPMFGLLKEAEAVT--LYSLEHLLLFISDPKGHSKHSRWSIISKLMHSKRAV 225


>Medtr4g070530.1 | DUF241 domain protein | HC |
           chr4:26568025-26566950 | 20130731
          Length = 296

 Score =  109 bits (273), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 66/115 (57%), Positives = 76/115 (66%), Gaps = 4/115 (3%)

Query: 1   MRELQSIIRRE-GNEIGFAVEGRKYLALRKKMKKQMRKALENSKGMKNELIAXX-XXXXX 58
           ++ELQS+IRR+ G E G AVEG KYLALRK  KKQ++KA    K MK ELIA        
Sbjct: 115 IQELQSVIRRKRGVETGLAVEGVKYLALRKTTKKQIQKAFLKLKEMKEELIASSLNKKDN 174

Query: 59  XXXPMFGFLKEAEAEADPLSSLECVLLFISEAKGLSRNRRWSEISKLMLPKRAVC 113
              PM GFLK+AE     +SSLE +LLFIS  KG S N+RWS ISKLM  KR VC
Sbjct: 175 NSSPMLGFLKKAEEVT--VSSLEHLLLFISNPKGHSNNKRWSAISKLMHSKRVVC 227


>Medtr3g116950.1 | DUF241 domain protein | HC |
           chr3:54700872-54699783 | 20130731
          Length = 296

 Score = 68.6 bits (166), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 41/114 (35%), Positives = 58/114 (50%), Gaps = 3/114 (2%)

Query: 2   RELQSIIRREGNEIGFAVEGRKYLALRKKMKKQMRKALENSKGMKNELIAXXXXXXXXXX 61
           RELQSIIRR G+ +    E +K++  RK +KK + KAL N KG                 
Sbjct: 117 RELQSIIRRRGDGLELTAEAKKFMTSRKVVKKAISKALANLKGNTKHSNILSTNNDHQTV 176

Query: 62  PMFGFLKEAEAEADPLSSLECVLLFISEAKGLSRNRRWSEISKLMLPKRAVCAL 115
            +   L++ E     LS+ + +L FIS     S++  W  ISKL+ PKR  C+L
Sbjct: 177 ALISLLQDVEVAT--LSTFQTILQFIS-GTTQSKSNSWGSISKLIQPKRVACSL 227


>Medtr4g070570.1 | DUF241 domain protein | HC |
           chr4:26579627-26578487 | 20130731
          Length = 303

 Score = 57.8 bits (138), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 44/116 (37%), Positives = 62/116 (53%), Gaps = 7/116 (6%)

Query: 2   RELQSIIRRE-GNEIGFAVEGRKYLALRKKMKKQMRKALENSKGM----KNELIAXXXXX 56
           RELQSI+RR+ G E+    E RK+LA RK +KK + KALEN K      K +L++     
Sbjct: 117 RELQSIMRRKRGGEMEVTAEVRKFLASRKVVKKAILKALENLKANVKKGKGKLLSPSNNK 176

Query: 57  XXXXXPMFGFLKEAEAEADPLSSLECVLLFISEAKGLSRNRRWSEISKLMLPKRAV 112
                 +   L++ E     LS LE +L+FIS       +  WS +SKLM+  + V
Sbjct: 177 DHEKVSLVSLLRDVEVIT--LSMLESLLIFISGPAQSKPSNYWSLVSKLMMQNKKV 230


>Medtr3g116920.1 | DUF241 domain protein | HC |
           chr3:54688814-54687788 | 20130731
          Length = 298

 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 56/118 (47%), Gaps = 7/118 (5%)

Query: 2   RELQSIIRRE----GNEIGFAVEGRKYLALRKKMKKQMRKALENSKGMKNELIAXXXXXX 57
           RELQS+IRR       E+    E +K+L  RK ++K + K L N KG             
Sbjct: 115 RELQSLIRRSKRRGSGEVELTSEVKKFLISRKVVRKSISKTLVNLKGNAKNSNILSTNKD 174

Query: 58  XXXXPMFGFLKEAEAEADPLSSLECVLLFISEAKGLSRNRRWSEISKLMLPKRAVCAL 115
                +   L++ E     LS+ + VL FIS     S++  W  ISKL+ PKR  C+L
Sbjct: 175 HQTVALINLLQDVEVAT--LSTFQAVLQFIS-GTTQSKSNSWGSISKLIQPKRVSCSL 229


>Medtr4g070590.1 | DUF241 domain protein | HC |
           chr4:26584199-26583027 | 20130731
          Length = 301

 Score = 50.1 bits (118), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 43/123 (34%), Positives = 60/123 (48%), Gaps = 6/123 (4%)

Query: 2   RELQSIIRRE-GNEIGFAVEGRKYLALRKKMKKQMRKALENSKGMKNEL-IAXXXXXXXX 59
           RELQSIIRR  G E    +E +K+L  RK ++K + KALEN KG  N+  +         
Sbjct: 119 RELQSIIRRRRGGEAEVTIEVKKFLTSRKVVRKAIFKALENLKGNANKCSLCINSNKDYQ 178

Query: 60  XXPMFGFLKEAEAEADPLSSLECVLLFISEAKGLSRNRRWSEISKLMLPKRAVCALKKQT 119
                  LK  E E    S  E +L+F+   +  S+   WS +SKLM  K+   +L +  
Sbjct: 179 TVATVSLLK--EVEMITFSLFESLLIFMCGTQ--SKRSSWSLVSKLMNSKKVSNSLSQGE 234

Query: 120 QMN 122
             N
Sbjct: 235 DEN 237