Miyakogusa Predicted Gene

Lj3g3v3363130.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3363130.1 Non Characterized Hit- tr|I1LJB9|I1LJB9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.20216
PE,63.64,0.0000000003, ,CUFF.45721.1
         (77 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g070530.1 | DUF241 domain protein | HC | chr4:26568025-265...    56   9e-09
Medtr4g070540.1 | DUF241 domain protein | HC | chr4:26570763-265...    47   3e-06

>Medtr4g070530.1 | DUF241 domain protein | HC |
           chr4:26568025-26566950 | 20130731
          Length = 296

 Score = 55.8 bits (133), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 30/55 (54%), Positives = 37/55 (67%)

Query: 19  SAISELVQPNRVACDSHVSDMNEFEKGHAALQSINSCKSPSIENFQSNVENSEVC 73
           SAIS+L+   RV CDS  SD NEFEK  A L S+ S    S ENFQS++E+ E+C
Sbjct: 214 SAISKLMHSKRVVCDSQYSDTNEFEKVDATLLSLISHNPSSTENFQSHLEDLEMC 268


>Medtr4g070540.1 | DUF241 domain protein | HC |
           chr4:26570763-26569729 | 20130731
          Length = 296

 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)

Query: 19  SAISELVQPNRVACDSHVSDMNEFEKGHAALQS-INSCKSPSIENFQSNVENSEVC 73
           S IS+L+   R   DS  SD NEFEK  +AL S I+  K+ S +NFQS++EN E+C
Sbjct: 213 SIISKLMHSKRAVSDSQESDTNEFEKVDSALLSLISHNKTSSADNFQSHMENLEIC 268