Miyakogusa Predicted Gene

Lj3g3v3348620.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3348620.1 Non Characterized Hit- tr|B8LN85|B8LN85_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,28.74,0.0000000002,seg,NULL,CUFF.45682.1
         (259 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g070010.1 | BTB/POZ domain plant-like protein, putative | ...   301   5e-82

>Medtr4g070010.1 | BTB/POZ domain plant-like protein, putative | HC
           | chr4:26342499-26346581 | 20130731
          Length = 487

 Score =  301 bits (770), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 168/270 (62%), Positives = 184/270 (68%), Gaps = 20/270 (7%)

Query: 1   MIPTTGVPKKRQRT-------AATRHXXXXXXXXXXXXXXXXXPSTTTGDALYFNDASTA 53
           MIPT G+ +KRQRT       ++T                   P+T+   A  FND+STA
Sbjct: 1   MIPTAGILRKRQRTTTTTTRISSTAAIANSSFFDINQNHHCLSPTTS---AFLFNDSSTA 57

Query: 54  DIILRLFIDTADSPLE-SSPSVED---SDLHVYLHSTILRRAKYFSALLSDRWIGLVHPH 109
           D+ILRLF DT   P   SS SV+    SDLHVYLHS ILRRAKYFSALLSDRWI  VHP 
Sbjct: 58  DVILRLFTDTITPPESPSSISVDSAPISDLHVYLHSDILRRAKYFSALLSDRWINNVHPQ 117

Query: 110 TXXXXXXXXXXXDRGELFRLNLGVSPTPGSIQNHLTVLELLYTSDFANTVNNASTAXXXX 169
                          ELFRLNLGV P+PGSIQNHLTVLELLYT+DF N V N STA    
Sbjct: 118 PSPEQITD------HELFRLNLGVPPSPGSIQNHLTVLELLYTNDFTNAVENVSTALDLL 171

Query: 170 XXXXXXXXXXCVRWCVAFLEAVPWTEEEENRVVSLIPFLNEEESKELVARVSPVGEDACE 229
                     CVRWCV +LEAVPWTEEEENRVV+LIPFL+EEESKEL+ARVSPVGE+ACE
Sbjct: 172 PVALELLFEDCVRWCVRYLEAVPWTEEEENRVVNLIPFLSEEESKELIARVSPVGENACE 231

Query: 230 AMLEGLISSAMNNYQNTAFVKAFVGKILRD 259
            MLEGLISSAMNNY NTAFVKAFVGKILRD
Sbjct: 232 EMLEGLISSAMNNYGNTAFVKAFVGKILRD 261